pycom111g00920

B2 protein-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
SuperScaffold_111
Physical Location & Seq
Forward (+)
602923 .. 604594
1672 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom111g00920.2

Sequence Viewer

Length: 882 bp
ATGGAGAGCTTGAACAGCTTTTGGCAACTGGGTGATGAGCTCCGAGGGCAGTCAAAAGTCGCAGAAGATCACAAATGGTTAATGGCTGCTTCAAAATTGGCTGAGCAGACAAGGGTAAAGGGCGAGCGTATGAATGACATTGATCTTTCAAAGGGCCCAGCTGAACAAAGGGCAAGGGATAAATTTGGGTTCCAGGAAGATAACAAATTTGAAGGCCAATACTTTAACATGCTGAGCTTGGATTCTAAAGTAAATGAAAATGTGAGCAAAAGTTCCTTCAGGAATGGTATTTATAACATGAATGCAGTTTACCAGAAAAACAGTGCAAGTATTGTGGGAAACATGACTGGAAACAAGTACAGCAACAAAGAAATCAACAACAGCAACAATAACAACAACGAATCTGCAAATACAGTTGAGAAAAGGTTCAAGACCTTGCCGGCAACTGAGACGCTCCCAAGAAATGAGGTGCTTGGAGGTTACATCTTTGTATGCAACAATGACACAATGCAGGAAGATTTGAAGCGACAACTATTTGGTTTACCTCCAAGGTATAGGGATTCTGTTCGGGCAATAACACCAGGCCTGCCGCTGTTTCTCTACAATTATACGACACACCAGCTGCATGGCATTTTCGAGGCAGCAAGCTTTGGTGGTTCAAACATTGATCCAACTGCTTGGGTAGACAAGAAGTGTAAAGGCGAATATAGGTTTCCTGCTCAGGTAAGGATCTGTGTTAGAAAAATCTGCAAGGCTTTGGAAGAAGATGCCTTCAGGCCAGTTTTGCACCACTATGATGGTCCCAAGTTCCGTCTTGAGCTGTCAGTTCCTGAGACCCTGGAGCTATTGGACCTATGCGAACAAGCGGGCTCTGCAGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

294

Amino Acids

33.27

Weight (kDa)

6.97

Isoelectric Point (pI)

31.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 294
AccI GTMKAC 1 cut(s) 684
AciI CCGC 2 cut(s) 590, 866
AclWI GGATC 2 cut(s) 662, 737
AcsI RAATTY 2 cut(s) 182, 206
AcuI CTGAAG 2 cut(s) 262, 757
AfaI GTAC 1 cut(s) 359
AgsI TTSAA 7 cut(s) 13, 93, 150, 212, 430, 523, 660
AjnI CCWGG 3 cut(s) 192, 580, 837
AluBI AGCT 9 cut(s) 9, 18, 40, 161, 237, 622, 648, 820, 844
AluI AGCT 9 cut(s) 9, 18, 40, 161, 237, 622, 648, 820, 844
Alw21I GWGCWC 1 cut(s) 42
Alw26I GTCTC 2 cut(s) 443, 827
AlwI GGATC 2 cut(s) 662, 737
AlwNI CAGNNNCTG 1 cut(s) 830
AoxI GGCC 4 cut(s) 154, 214, 583, 776
ApaI GGGCCC 1 cut(s) 158
ApeKI GCWGC 4 cut(s) 86, 622, 641, 875
ApoI RAATTY 2 cut(s) 182, 206
Asp700I GAANNNNTTC 1 cut(s) 425
AspS9I GGNCC 4 cut(s) 154, 155, 800, 850
AsuHPI GGTGA 1 cut(s) 44
AvaII GGWCC 2 cut(s) 800, 850
BaeGI GKGCMC 1 cut(s) 158
BanII GRGCYC 3 cut(s) 42, 158, 872
Bbv12I GWGCWC 1 cut(s) 42
BbvI GCAGC 3 cut(s) 73, 609, 653
BccI CCATC 1 cut(s) 791
BciT130I CCWGG 3 cut(s) 194, 582, 839
BcoDI GTCTC 2 cut(s) 443, 827
BfmI CTRYAG 1 cut(s) 873
BisI GCNGC 5 cut(s) 87, 590, 623, 642, 876
BlpI GCTNAGC 2 cut(s) 102, 233
BlsI GCNGC 5 cut(s) 88, 591, 624, 643, 877
Bme1390I CCNGG 3 cut(s) 194, 582, 839
Bme18I GGWCC 2 cut(s) 800, 850
BmgT120I GGNCC 4 cut(s) 154, 155, 800, 850
BmiI GGNNCC 3 cut(s) 156, 191, 802
BmrFI CCNGG 3 cut(s) 194, 582, 839
BmrI ACTGGG 1 cut(s) 38
BmsI GCATC 1 cut(s) 757
BmuI ACTGGG 1 cut(s) 38
BpmI CTGGAG 1 cut(s) 860
Bpu10I CCTNAGC 1 cut(s) 720
Bpu1102I GCTNAGC 2 cut(s) 102, 233
BpuEI CTTGAG 1 cut(s) 836
BsaI GGTCTC 1 cut(s) 827
BsaJI CCNNGG 3 cut(s) 43, 548, 837
Bse118I RCCGGY 1 cut(s) 439
Bse1I ACTGG 3 cut(s) 33, 352, 779
BseBI CCWGG 3 cut(s) 194, 582, 839
BseDI CCNNGG 3 cut(s) 43, 548, 837
BseMII CTCAG 5 cut(s) 93, 224, 438, 734, 822
BseNI ACTGG 3 cut(s) 33, 352, 779
BseSI GKGCMC 1 cut(s) 158
BseXI GCAGC 3 cut(s) 73, 609, 653
BseYI CCCAGC 1 cut(s) 157
BshFI GGCC 4 cut(s) 156, 216, 585, 778
BsiHKAI GWGCWC 1 cut(s) 42
BsiSI CCGG 1 cut(s) 440
BslFI GGGAC 1 cut(s) 786
BsmAI GTCTC 2 cut(s) 443, 827
BsmBI CGTCTC 1 cut(s) 443
BsmFI GGGAC 1 cut(s) 786
BsmI GAATGC 1 cut(s) 307
BsnI GGCC 4 cut(s) 156, 216, 585, 778
Bso31I GGTCTC 1 cut(s) 827
Bsp120I GGGCCC 1 cut(s) 154
Bsp1286I GDGCHC 3 cut(s) 42, 158, 872
Bsp143I GATC 4 cut(s) 67, 142, 667, 729
Bsp1720I GCTNAGC 2 cut(s) 102, 233
BspACI CCGC 2 cut(s) 590, 866
BspANI GGCC 4 cut(s) 156, 216, 585, 778
BspCNI CTCAG 5 cut(s) 94, 225, 439, 733, 823
BspLI GGNNCC 3 cut(s) 156, 191, 802
BspMAI CTGCAG 1 cut(s) 877
BspPI GGATC 2 cut(s) 662, 737
BspTNI GGTCTC 1 cut(s) 827
BsrFI RCCGGY 1 cut(s) 439
BsrI ACTGG 3 cut(s) 33, 352, 779
BssAI RCCGGY 1 cut(s) 439
BssECI CCNNGG 3 cut(s) 43, 548, 837
BssMI GATC 4 cut(s) 67, 142, 667, 729
BssT1I CCWWGG 1 cut(s) 548
Bst2UI CCWGG 3 cut(s) 194, 582, 839
Bst4CI ACNGT 2 cut(s) 323, 415
BstC8I GCNNGC 5 cut(s) 125, 441, 587, 646, 868
BstDEI CTNAG 5 cut(s) 102, 233, 447, 720, 831
BstKTI GATC 4 cut(s) 70, 145, 670, 732
BstMAI GTCTC 2 cut(s) 443, 827
BstMBI GATC 4 cut(s) 67, 142, 667, 729
BstMWI GCNNNNNNNGC 4 cut(s) 15, 46, 784, 872
BstNI CCWGG 3 cut(s) 194, 582, 839
BstNSI RCATGY 1 cut(s) 232
BstSCI CCNGG 3 cut(s) 192, 580, 837
BstSFI CTRYAG 1 cut(s) 873
BstSLI GKGCMC 1 cut(s) 158
BstV1I GCAGC 3 cut(s) 73, 609, 653
BstX2I RGATCY 1 cut(s) 729
BstXI CCANNNNNNTGG 3 cut(s) 626, 678, 797
BstYI RGATCY 1 cut(s) 729
BsuRI GGCC 4 cut(s) 156, 216, 585, 778
BtsIMutI CAGTG 1 cut(s) 328
Cac8I GCNNGC 5 cut(s) 125, 441, 587, 646, 868
CaiI CAGNNNCTG 1 cut(s) 830
Cfr10I RCCGGY 1 cut(s) 439
Cfr13I GGNCC 4 cut(s) 154, 155, 800, 850
CseI GACGC 1 cut(s) 460
Csp6I GTAC 1 cut(s) 358
CspCI CAANNNNNGTGG 2 cut(s) 315, 350
CviAII CATG 4 cut(s) 229, 298, 343, 626
CviQI GTAC 1 cut(s) 358
DdeI CTNAG 5 cut(s) 102, 233, 447, 720, 831
DpnI GATC 4 cut(s) 69, 144, 669, 731
DpnII GATC 4 cut(s) 67, 142, 667, 729
Ecl136II GAGCTC 1 cut(s) 40
Eco130I CCWWGG 1 cut(s) 548
Eco147I AGGCCT 1 cut(s) 585
Eco24I GRGCYC 3 cut(s) 42, 158, 872
Eco31I GGTCTC 1 cut(s) 827
Eco47I GGWCC 2 cut(s) 800, 850
Eco53kI GAGCTC 1 cut(s) 40
Eco57I CTGAAG 2 cut(s) 262, 757
EcoICRI GAGCTC 1 cut(s) 40
EcoO109I RGGNCCY 1 cut(s) 154
EcoRII CCWGG 3 cut(s) 192, 580, 837
EcoT14I CCWWGG 1 cut(s) 548
EcoT38I GRGCYC 3 cut(s) 42, 158, 872
ErhI CCWWGG 1 cut(s) 548
Esp3I CGTCTC 1 cut(s) 443
FaeI CATG 4 cut(s) 232, 301, 346, 629
FaqI GGGAC 1 cut(s) 786
FatI CATG 4 cut(s) 228, 297, 342, 625
FauI CCCGC 1 cut(s) 859
FblI GTMKAC 1 cut(s) 684
Fnu4HI GCNGC 5 cut(s) 87, 590, 623, 642, 876
FriOI GRGCYC 3 cut(s) 42, 158, 872
Fsp4HI GCNGC 5 cut(s) 87, 590, 623, 642, 876
GluI GCNGC 5 cut(s) 87, 590, 623, 642, 876
GsaI CCCAGC 1 cut(s) 161
GsuI CTGGAG 1 cut(s) 860
HaeIII GGCC 4 cut(s) 156, 216, 585, 778
HapII CCGG 1 cut(s) 440
HgaI GACGC 1 cut(s) 460
Hin1II CATG 4 cut(s) 232, 301, 346, 629
HindIII AAGCTT 1 cut(s) 646
HinfI GANTC 3 cut(s) 242, 401, 560
HpaII CCGG 1 cut(s) 440
HphI GGTGA 1 cut(s) 44
Hpy166II GTNNAC 3 cut(s) 310, 542, 685
Hpy188I TCNGA 1 cut(s) 44
Hpy188III TCNNGA 4 cut(s) 280, 430, 815, 830
Hpy8I GTNNAC 3 cut(s) 310, 542, 685
HpyAV CCTTC 3 cut(s) 206, 286, 781
HpyCH4III ACNGT 2 cut(s) 323, 415
HpyCH4V TGCA 9 cut(s) 305, 326, 407, 495, 511, 625, 750, 787, 875
HpyF10VI GCNNNNNNNGC 4 cut(s) 15, 46, 784, 872
HpyF3I CTNAG 5 cut(s) 102, 233, 447, 720, 831
Hsp92II CATG 4 cut(s) 232, 301, 346, 629
KroI GCCGGC 1 cut(s) 439
KroNI GCCGGC 1 cut(s) 441
Kzo9I GATC 4 cut(s) 67, 142, 667, 729
LmnI GCTCC 3 cut(s) 45, 459, 841
Lsp1109I GCAGC 3 cut(s) 73, 609, 653
LweI GCATC 1 cut(s) 757
MaeIII GTNAC 1 cut(s) 479
MalI GATC 4 cut(s) 69, 144, 669, 731
MboI GATC 4 cut(s) 67, 142, 667, 729
MboII GAAGA 5 cut(s) 77, 209, 527, 773, 776
MflI RGATCY 1 cut(s) 729
MhlI GDGCHC 3 cut(s) 42, 158, 872
MluCI AATT 4 cut(s) 95, 182, 206, 604
MmeI TCCRAC 1 cut(s) 695
MnlI CCTC 5 cut(s) 38, 460, 470, 555, 631
MroNI GCCGGC 1 cut(s) 439
MroXI GAANNNNTTC 1 cut(s) 425
MseI TTAA 2 cut(s) 80, 225
MslI CAYNNNNRTG 2 cut(s) 792, 795
MspA1I CMGCKG 3 cut(s) 161, 592, 622
MspI CCGG 1 cut(s) 440
MspR9I CCNGG 3 cut(s) 194, 582, 839
Mva1269I GAATGC 1 cut(s) 307
MvaI CCWGG 3 cut(s) 194, 582, 839
MwoI GCNNNNNNNGC 4 cut(s) 15, 46, 784, 872
NaeI GCCGGC 1 cut(s) 441
NdeII GATC 4 cut(s) 67, 142, 667, 729
NgoMIV GCCGGC 1 cut(s) 439
NlaIII CATG 4 cut(s) 232, 301, 346, 629
NlaIV GGNNCC 3 cut(s) 156, 191, 802
NspI RCATGY 1 cut(s) 232
PceI AGGCCT 1 cut(s) 585
PctI GAATGC 1 cut(s) 307
PdiI GCCGGC 1 cut(s) 441
PdmI GAANNNNTTC 1 cut(s) 425
PfeI GAWTC 3 cut(s) 242, 401, 560
PfoI TCCNGGA 1 cut(s) 192
PkrI GCNGC 5 cut(s) 88, 591, 624, 643, 877
PsiI TTATAA 1 cut(s) 294
Psp124BI GAGCTC 1 cut(s) 42
Psp6I CCWGG 3 cut(s) 192, 580, 837
PspFI CCCAGC 1 cut(s) 157
PspGI CCWGG 3 cut(s) 192, 580, 837
PspN4I GGNNCC 3 cut(s) 156, 191, 802
PspOMI GGGCCC 1 cut(s) 154
PspPI GGNCC 4 cut(s) 154, 155, 800, 850
PstI CTGCAG 1 cut(s) 877
PstNI CAGNNNCTG 1 cut(s) 830
PsuI RGATCY 1 cut(s) 729
PvuII CAGCTG 2 cut(s) 161, 622
RsaI GTAC 1 cut(s) 359
RsaNI GTAC 1 cut(s) 358
RseI CAYNNNNRTG 2 cut(s) 792, 795
SacI GAGCTC 1 cut(s) 42
SaqAI TTAA 2 cut(s) 80, 225
SatI GCNGC 5 cut(s) 87, 590, 623, 642, 876
Sau3AI GATC 4 cut(s) 67, 142, 667, 729
Sau96I GGNCC 4 cut(s) 154, 155, 800, 850
ScrFI CCNGG 3 cut(s) 194, 582, 839
SduI GDGCHC 3 cut(s) 42, 158, 872
SfaNI GCATC 1 cut(s) 757
SfcI CTRYAG 1 cut(s) 873
SinI GGWCC 2 cut(s) 800, 850
SmiMI CAYNNNNRTG 2 cut(s) 792, 795
SmlI CTYRAG 1 cut(s) 815
SmoI CTYRAG 1 cut(s) 815
Sse9I AATT 4 cut(s) 95, 182, 206, 604
SseBI AGGCCT 1 cut(s) 585
SsiI CCGC 2 cut(s) 590, 866
SstI GAGCTC 1 cut(s) 42
StuI AGGCCT 1 cut(s) 585
StyD4I CCNGG 3 cut(s) 192, 580, 837
StyI CCWWGG 1 cut(s) 548
TaaI ACNGT 2 cut(s) 323, 415
TaqI TCGA 1 cut(s) 636
TasI AATT 4 cut(s) 95, 182, 206, 604
TatI WGTACW 1 cut(s) 357
TauI GCSGC 1 cut(s) 592
TfiI GAWTC 3 cut(s) 242, 401, 560
Tru1I TTAA 2 cut(s) 80, 225
Tru9I TTAA 2 cut(s) 80, 225
TscAI CASTG 1 cut(s) 328
TseI GCWGC 4 cut(s) 86, 622, 641, 875
TspDTI ATGAA 3 cut(s) 146, 270, 314
TspGWI ACGGA 1 cut(s) 800
TspRI CASTG 1 cut(s) 328
VpaK11BI GGWCC 2 cut(s) 800, 850
XapI RAATTY 2 cut(s) 182, 206
XceI RCATGY 1 cut(s) 232
XmiI GTMKAC 1 cut(s) 684
XmnI GAANNNNTTC 1 cut(s) 425
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.