Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0011472

Physical Location & Seq

Genomic Coordinates Reverse (-)

3252126 .. 3256891

Gene Structure 4766 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000022545

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1587 bp

ATGGGAACGCTTAGTTTGAGCAGCGTCGATTTTAATTTGAGTGTGAAATACCCAGAAATTCCAAGATTCCAATGGAGCAAGAGAAACAAGAATTCATGCTTGTTGTGCGGAGGAAGCATGAAGAGGCTGAGATGGAGATGTTATACTTCTTCTAACGACGATGAGAGAAAGACTAGTAGCAACAAGTCAAAAGACGAGGCTGCCGAAGATACACGCAGCAACGACCCTGCTTCCCTCCCTTCCACTTCCAGGCCACCACCTACATCACCACTTGGAACCGCTTATAATAATTTCCAAGTCGACTCCTTTAAGCTGATGGAACTCCTTGGACCTGAGAAGGTTGATCCTACTGATGTAAAGCTCATTAAGGAAAAGCTTTTTGGCTATTCTACTTTTTGGGTCACTAAAGAGGAGCCGTTTGGAGACCTTGGGGAGGGCATTCTTTTCCTTGGTAATTTGAGGGGAAAGAGAGAAGACGTATTTGCCAAATTCCAGACTCTGCTAGCTGAGGTTACAGGTAATAAGTACAACCTTTTTATGGTGGAGGAACCCAATTCAGAAGATCTAGATCCGCGTGGTGGGCCTCGTGTTAGCTTTGGTCTGCTCCGGAAAGAGGTCTCAGAACCAGGCCCAACAACACTTTGGCAATATGTAATTGCGCTCTTGTTATTTCTTCTAACAATTGGATCATCTGTAGAGTTAGGAATTGCATCTCAGATAAATAGACTTCCACCAGAGGTTGTCAAGTATTTTACAGATCCAAATGCTATTGACCCACCAGAAATGGAGCTGCTATTCCCATTTGTGGAGTCAGCTTTGCCCCTAGCCTATGGTGTACTTGGGGTTTTGCTATTTCATGAAGTTGGGCATCTTCTGGCTGCTTTTCCAAAGAAAGTAAAACTTAGCATTCCTTACTTCATTCCTAATATTACACTTGGCAGCTTTGGCGCAATCACTCAGTTTAAATCCATTCTTCCCGATCGGAGCACAAAAGTCGACATTTCACTTGCAGGCCCGTTTGCTGGTTTTGCACTGTCATTGTCAATGTTTGCTGTAGGTCTGCTGCTCTCATCTAATCCCAATGCCACAGAAGAGCTGGTGCAGGTTCCAAGCATGCTGTTTCAAGGTTCTTTGCTTCTAGGACTCATCAGTAGAGCTACTCTTGGTTATGCATCAATGCATGCTGCGACTGTTGCAATTCATCCTCTTATGATTGCTGGCTGGTGTGGATTGACAACTACAGCTTTTAATATGCTTCCAGTTGGCTGTCTTGATGGTGGAAGAGCTGTGCAGGGTGCTTTTGGAAAAAATGCACTGATTGCGTTTGGTCTGACAACTTACACGTTGCTTGGATTGGGAGTGCTCGGTGGACCTTTGTCACTTCCATGGGGACTCTACGTGCTCATATGCCAGAGGACTCCCGAGAAACCTTGCCTAAATGATGTAACGGAGGTTGGAACATGGAGGAAAACAATTGTTACAGTGGCTATTTTCCTTGTGGTGCTGACGCTCCTTCCGGTATGGGATGAGCTTGCAGAGGAGCTAGTCAGCCTGGTAAATGCCACCACTAGCAATGAGGATTGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004222 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006091 GO:0006508 GO:0006807 GO:0006950 GO:0006970 GO:0006996 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009314 GO:0009416 GO:0009507 GO:0009536 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009651 GO:0009657 GO:0009658 GO:0009668 GO:0009719 GO:0009723 GO:0009725 GO:0009959 GO:0009987 GO:0010027 GO:0010033 GO:0010207 GO:0015979 GO:0016043 GO:0016787 GO:0019538 GO:0019684 GO:0022607 GO:0034622 GO:0042221 GO:0043157 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0048564 GO:0050896 GO:0060359 GO:0061024 GO:0065003 GO:0070011 GO:0071704 GO:0071840 GO:0140096 GO:1901564 GO:1901698

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_M50

Protein Analysis

529

Amino Acids

57.59

Weight (kDa)

5.42

Isoelectric Point (pI)

34.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_M50	PF02163	276 - 435	1e-19	Peptidase family M50

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011472)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G35220
fragaria_vesca	FvH4_1g28520 FvH4_1g28520
malus_domestica	MD12G1009600.v1.1 MD14G1007000.v1.1
prunus_persica	Prupe.7G011600_v2.0.a1 Prupe.7G011600_v2.0.a1
pyrus_communis	pycom12g00740 pycom14g00550
rosa_chinensis	RchiOBHm_Chr3g0496231
rosa_laevigata	RLG00000022545
rosa_multiflora	Rmu_sc0004080.1_g000013 Rmu_ssc0000454.1_g000006
rosa_roxburghii	Rroxscaffold_6G00389320
rosa_rugosa	Rorug03G0280800 Rorug03G0280900
rosa_samantha	Rh3BG364000 Rh3CG360900 Rh3DG363900
rosa_wichuraiana	Rw3G028710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	285
Acc36I	ACCTGC	1 cut(s)	1093
AccI	GTMKAC	2 cut(s)	300, 996
AccII	CGCG	1 cut(s)	574
AccIII	TCCGGA	1 cut(s)	606
AciI	CCGC	3 cut(s)	108, 279, 572
AclWI	GGATC	4 cut(s)	338, 563, 694, 752
AcsI	RAATTY	3 cut(s)	57, 91, 488
AfaI	GTAC	2 cut(s)	527, 837
AfiI	CCNNNNNNNGG	7 cut(s)	249, 433, 538, 578, 613, 805, 1022
AflIII	ACRYGT	1 cut(s)	1341
AgsI	TTSAA	1 cut(s)	1124
AhlI	ACTAGT	1 cut(s)	173
AjnI	CCWGG	3 cut(s)	248, 625, 1551
AjuI	GAANNNNNNNTTGG	2 cut(s)	363, 395
Alw21I	GWGCWC	3 cut(s)	989, 1365, 1404
Alw26I	GTCTC	2 cut(s)	417, 622
AlwI	GGATC	4 cut(s)	338, 563, 694, 752
AlwNI	CAGNNNCTG	1 cut(s)	499
Ama87I	CYCGRG	1 cut(s)	1421
Aor13HI	TCCGGA	1 cut(s)	606
AoxI	GGCC	4 cut(s)	251, 581, 628, 1012
ApeKI	GCWGC	8 cut(s)	21, 200, 216, 790, 878, 939, 1063, 1184
ApoI	RAATTY	3 cut(s)	57, 91, 488
AspLEI	GCGC	2 cut(s)	661, 950
AspS9I	GGNCC	5 cut(s)	329, 581, 629, 1013, 1370
AsuHPI	GGTGA	1 cut(s)	258
AsuNHI	GCTAGC	1 cut(s)	502
AvaI	CYCGRG	1 cut(s)	1421
AvaII	GGWCC	2 cut(s)	329, 1370
BauI	CACGAG	1 cut(s)	585
BbsI	GAAGAC	1 cut(s)	480
Bbv12I	GWGCWC	3 cut(s)	989, 1365, 1404
BbvCI	CCTCAGC	1 cut(s)	507
BbvI	GCAGC	8 cut(s)	33, 187, 228, 777, 865, 951, 1050, 1171
BccI	CCATC	3 cut(s)	126, 310, 1268
BceAI	ACGGC	1 cut(s)	400
BcgI	CGANNNNNNTGC	2 cut(s)	976, 1010
BciT130I	CCWGG	3 cut(s)	250, 627, 1553
BcoDI	GTCTC	2 cut(s)	417, 622
BcuI	ACTAGT	1 cut(s)	173
BfaI	CTAG	8 cut(s)	174, 503, 566, 824, 1139, 1544, 1569, 1585
BfmI	CTRYAG	3 cut(s)	693, 1053, 1239
BfuAI	ACCTGC	1 cut(s)	1093
BglII	AGATCT	1 cut(s)	562
BisI	GCNGC	8 cut(s)	22, 201, 217, 791, 879, 940, 1064, 1185
BlsI	GCNGC	8 cut(s)	23, 202, 218, 792, 880, 941, 1065, 1186
Bme1390I	CCNGG	3 cut(s)	250, 627, 1553
Bme18I	GGWCC	2 cut(s)	329, 1370
BmeT110I	CYCGRG	1 cut(s)	1421
BmgT120I	GGNCC	5 cut(s)	329, 581, 629, 1013, 1370
BmiI	GGNNCC	4 cut(s)	277, 414, 549, 1107
BmrFI	CCNGG	3 cut(s)	250, 627, 1553
BmsI	GCATC	3 cut(s)	719, 877, 1181
BmtI	GCTAGC	1 cut(s)	506
BoxI	GACNNNNGTC	1 cut(s)	1375
BpiI	GAAGAC	1 cut(s)	480
Bpu10I	CCTNAGC	1 cut(s)	507
BsaAI	YACGTR	1 cut(s)	1399
BsaBI	GATNNNNATC	1 cut(s)	567
BsaI	GGTCTC	2 cut(s)	417, 622
BsaJI	CCNNGG	4 cut(s)	325, 427, 448, 1385
BsaWI	WCCGGW	2 cut(s)	606, 1516
Bsc4I	CCNNNNNNNGG	7 cut(s)	249, 433, 538, 578, 613, 805, 1022
Bse1I	ACTGG	1 cut(s)	1259
Bse3DI	GCAATG	1 cut(s)	1579
Bse8I	GATNNNNATC	1 cut(s)	567
BseAI	TCCGGA	1 cut(s)	606
BseBI	CCWGG	3 cut(s)	250, 627, 1553
BseDI	CCNNGG	4 cut(s)	325, 427, 448, 1385
BseGI	GGATG	2 cut(s)	1201, 1531
BseJI	GATNNNNATC	1 cut(s)	567
BseLI	CCNNNNNNNGG	7 cut(s)	249, 433, 538, 578, 613, 805, 1022
BseMI	GCAATG	1 cut(s)	1579
BseMII	CTCAG	6 cut(s)	119, 324, 498, 633, 728, 971
BseNI	ACTGG	1 cut(s)	1259
BseRI	GAGGAG	2 cut(s)	425, 1553
BseXI	GCAGC	8 cut(s)	33, 187, 228, 777, 865, 951, 1050, 1171
BsgI	GTGCAG	2 cut(s)	1121, 1310
Bsh1236I	CGCG	1 cut(s)	574
Bsh1285I	CGRYCG	1 cut(s)	982
BshFI	GGCC	4 cut(s)	253, 583, 630, 1014
BsiEI	CGRYCG	1 cut(s)	982
BsiHKAI	GWGCWC	3 cut(s)	989, 1365, 1404
BsiHKCI	CYCGRG	1 cut(s)	1421
BsiSI	CCGG	2 cut(s)	607, 1517
BslFI	GGGAC	1 cut(s)	1404
BslI	CCNNNNNNNGG	7 cut(s)	249, 433, 538, 578, 613, 805, 1022
BsmAI	GTCTC	2 cut(s)	417, 622
BsmFI	GGGAC	1 cut(s)	1404
BsmI	GAATGC	2 cut(s)	438, 906
BsnI	GGCC	4 cut(s)	253, 583, 630, 1014
Bso31I	GGTCTC	2 cut(s)	417, 622
BsoBI	CYCGRG	1 cut(s)	1421
Bsp1286I	GDGCHC	3 cut(s)	989, 1365, 1404
Bsp13I	TCCGGA	1 cut(s)	606
Bsp143I	GATC	6 cut(s)	343, 562, 568, 686, 757, 979
Bsp19I	CCATGG	1 cut(s)	1385
BspACI	CCGC	3 cut(s)	108, 279, 572
BspANI	GGCC	4 cut(s)	253, 583, 630, 1014
BspCNI	CTCAG	6 cut(s)	120, 325, 499, 632, 727, 970
BspEI	TCCGGA	1 cut(s)	606
BspFNI	CGCG	1 cut(s)	574
BspHI	TCATGA	1 cut(s)	856
BspLI	GGNNCC	4 cut(s)	277, 414, 549, 1107
BspMI	ACCTGC	1 cut(s)	1093
BspOI	GCTAGC	1 cut(s)	506
BspPI	GGATC	4 cut(s)	338, 563, 694, 752
BspQI	GCTCTTC	2 cut(s)	1086, 1276
BspTNI	GGTCTC	2 cut(s)	417, 622
BsrDI	GCAATG	1 cut(s)	1579
BsrI	ACTGG	1 cut(s)	1259
BssECI	CCNNGG	4 cut(s)	325, 427, 448, 1385
BssMI	GATC	6 cut(s)	343, 562, 568, 686, 757, 979
BssSI	CACGAG	1 cut(s)	585
BssT1I	CCWWGG	4 cut(s)	325, 427, 448, 1385
Bst2BI	CACGAG	1 cut(s)	585
Bst2UI	CCWGG	3 cut(s)	250, 627, 1553
Bst4CI	ACNGT	3 cut(s)	1035, 1192, 1483
Bst6I	CTCTTC	3 cut(s)	116, 1086, 1276
BstAPI	GCANNNNNTGC	1 cut(s)	1319
BstBAI	YACGTR	1 cut(s)	1399
BstC8I	GCNNGC	6 cut(s)	504, 1012, 1115, 1182, 1219, 1533
BstDEI	CTNAG	8 cut(s)	11, 128, 333, 507, 619, 714, 902, 957
BstDSI	CCRYGG	1 cut(s)	1385
BstENI	CCTNNNNNAGG	1 cut(s)	431
BstF5I	GGATG	2 cut(s)	1201, 1531
BstFNI	CGCG	1 cut(s)	574
BstHHI	GCGC	2 cut(s)	661, 950
BstKTI	GATC	6 cut(s)	346, 565, 571, 689, 760, 982
BstMAI	GTCTC	2 cut(s)	417, 622
BstMBI	GATC	6 cut(s)	343, 562, 568, 686, 757, 979
BstMCI	CGRYCG	1 cut(s)	982
BstMWI	GCNNNNNNNGC	7 cut(s)	105, 114, 580, 945, 1028, 1193, 1319
BstNI	CCWGG	3 cut(s)	250, 627, 1553
BstNSI	RCATGY	2 cut(s)	1117, 1184
BstPAI	GACNNNNGTC	1 cut(s)	1375
BstSCI	CCNGG	3 cut(s)	248, 625, 1551
BstSFI	CTRYAG	3 cut(s)	693, 1053, 1239
BstUI	CGCG	1 cut(s)	574
BstV1I	GCAGC	8 cut(s)	33, 187, 228, 777, 865, 951, 1050, 1171
BstV2I	GAAGAC	1 cut(s)	480
BstX2I	RGATCY	3 cut(s)	562, 568, 757
BstYI	RGATCY	3 cut(s)	562, 568, 757
BsuRI	GGCC	4 cut(s)	253, 583, 630, 1014
BtgI	CCRYGG	1 cut(s)	1385
BtsCI	GGATG	2 cut(s)	1201, 1531
BtsIMutI	CAGTG	3 cut(s)	1031, 1313, 1488
BveI	ACCTGC	1 cut(s)	1093
Cac8I	GCNNGC	6 cut(s)	504, 1012, 1115, 1182, 1219, 1533
CaiI	CAGNNNCTG	1 cut(s)	499
CciI	TCATGA	1 cut(s)	856
CfoI	GCGC	2 cut(s)	661, 950
Cfr13I	GGNCC	5 cut(s)	329, 581, 629, 1013, 1370
CseI	GACGC	2 cut(s)	13, 1516
Csp6I	GTAC	2 cut(s)	526, 836
CviAII	CATG	7 cut(s)	96, 118, 857, 1114, 1181, 1386, 1461
CviQI	GTAC	2 cut(s)	526, 836
DdeI	CTNAG	8 cut(s)	11, 128, 333, 507, 619, 714, 902, 957
DpnI	GATC	6 cut(s)	345, 564, 570, 688, 759, 981
DpnII	GATC	6 cut(s)	343, 562, 568, 686, 757, 979
DraI	TTTAAA	1 cut(s)	964
Eam1104I	CTCTTC	3 cut(s)	116, 1086, 1276
EarI	CTCTTC	3 cut(s)	116, 1086, 1276
Eco130I	CCWWGG	4 cut(s)	325, 427, 448, 1385
Eco31I	GGTCTC	2 cut(s)	417, 622
Eco47I	GGWCC	2 cut(s)	329, 1370
Eco88I	CYCGRG	1 cut(s)	1421
EcoNI	CCTNNNNNAGG	1 cut(s)	431
EcoRI	GAATTC	1 cut(s)	91
EcoRII	CCWGG	3 cut(s)	248, 625, 1551
EcoT14I	CCWWGG	4 cut(s)	325, 427, 448, 1385
EcoT22I	ATGCAT	2 cut(s)	1174, 1182
ErhI	CCWWGG	4 cut(s)	325, 427, 448, 1385
FaeI	CATG	7 cut(s)	99, 121, 860, 1117, 1184, 1389, 1464
FalI	AAGNNNNNCTT	2 cut(s)	885, 917
FaqI	GGGAC	1 cut(s)	1404
FatI	CATG	7 cut(s)	95, 117, 856, 1113, 1180, 1385, 1460
FauNDI	CATATG	1 cut(s)	1406
FblI	GTMKAC	2 cut(s)	300, 996
Fnu4HI	GCNGC	8 cut(s)	22, 201, 217, 791, 879, 940, 1064, 1185
FokI	GGATG	2 cut(s)	1188, 1538
Fsp4HI	GCNGC	8 cut(s)	22, 201, 217, 791, 879, 940, 1064, 1185
FspBI	CTAG	8 cut(s)	174, 503, 566, 824, 1139, 1544, 1569, 1585
GlaI	GCGC	2 cut(s)	660, 949
GluI	GCNGC	8 cut(s)	22, 201, 217, 791, 879, 940, 1064, 1185
HaeIII	GGCC	4 cut(s)	253, 583, 630, 1014
HapII	CCGG	2 cut(s)	607, 1517
HgaI	GACGC	2 cut(s)	13, 1516
HhaI	GCGC	2 cut(s)	661, 950
Hin1II	CATG	7 cut(s)	99, 121, 860, 1117, 1184, 1389, 1464
Hin6I	GCGC	2 cut(s)	659, 948
HinP1I	GCGC	2 cut(s)	659, 948
HincII	GTYRAC	2 cut(s)	301, 997
HindII	GTYRAC	2 cut(s)	301, 997
HindIII	AAGCTT	1 cut(s)	374
HinfI	GANTC	7 cut(s)	66, 302, 496, 809, 1143, 1392, 1417
HpaII	CCGG	2 cut(s)	607, 1517
HphI	GGTGA	1 cut(s)	258
Hpy166II	GTNNAC	4 cut(s)	301, 836, 997, 1370
Hpy188I	TCNGA	5 cut(s)	559, 622, 717, 984, 1332
Hpy188III	TCNNGA	7 cut(s)	493, 566, 607, 857, 977, 1271, 1421
Hpy8I	GTNNAC	4 cut(s)	301, 836, 997, 1370
Hpy99I	CGWCG	2 cut(s)	29, 161
HpyAV	CCTTC	3 cut(s)	249, 331, 1523
HpyCH4III	ACNGT	3 cut(s)	1035, 1192, 1483
HpyCH4IV	ACGT	3 cut(s)	477, 1343, 1398
HpyF10VI	GCNNNNNNNGC	7 cut(s)	105, 114, 580, 945, 1028, 1193, 1319
HpyF3I	CTNAG	8 cut(s)	11, 128, 333, 507, 619, 714, 902, 957
HpySE526I	ACGT	3 cut(s)	477, 1343, 1398
Hsp92II	CATG	7 cut(s)	99, 121, 860, 1117, 1184, 1389, 1464
HspAI	GCGC	2 cut(s)	659, 948
Kpn2I	TCCGGA	1 cut(s)	606
Kzo9I	GATC	6 cut(s)	343, 562, 568, 686, 757, 979
LguI	GCTCTTC	2 cut(s)	1086, 1276
LmnI	GCTCC	7 cut(s)	75, 412, 609, 787, 984, 1515, 1540
Lsp1109I	GCAGC	8 cut(s)	33, 187, 228, 777, 865, 951, 1050, 1171
LweI	GCATC	3 cut(s)	719, 877, 1181
MaeI	CTAG	8 cut(s)	174, 503, 566, 824, 1139, 1544, 1569, 1585
MaeII	ACGT	3 cut(s)	477, 1343, 1398
MaeIII	GTNAC	5 cut(s)	400, 511, 1377, 1444, 1477
MalI	GATC	6 cut(s)	345, 564, 570, 688, 759, 981
MboI	GATC	6 cut(s)	343, 562, 568, 686, 757, 979
MfeI	CAATTG	2 cut(s)	681, 1473
MflI	RGATCY	3 cut(s)	562, 568, 757
MhlI	GDGCHC	3 cut(s)	989, 1365, 1404
MlyI	GAGTC	6 cut(s)	296, 490, 818, 1137, 1386, 1411
MmeI	TCCRAC	1 cut(s)	1435
Mph1103I	ATGCAT	2 cut(s)	1174, 1182
MroI	TCCGGA	1 cut(s)	606
MseI	TTAA	5 cut(s)	33, 309, 366, 963, 1248
MslI	CAYNNNNRTG	1 cut(s)	1384
MspI	CCGG	2 cut(s)	607, 1517
MspR9I	CCNGG	3 cut(s)	250, 627, 1553
MunI	CAATTG	2 cut(s)	681, 1473
Mva1269I	GAATGC	2 cut(s)	438, 906
MvaI	CCWGG	3 cut(s)	250, 627, 1553
MvnI	CGCG	1 cut(s)	574
MwoI	GCNNNNNNNGC	7 cut(s)	105, 114, 580, 945, 1028, 1193, 1319
NcoI	CCATGG	1 cut(s)	1385
NdeI	CATATG	1 cut(s)	1406
NdeII	GATC	6 cut(s)	343, 562, 568, 686, 757, 979
NheI	GCTAGC	1 cut(s)	502
NlaIII	CATG	7 cut(s)	99, 121, 860, 1117, 1184, 1389, 1464
NlaIV	GGNNCC	4 cut(s)	277, 414, 549, 1107
NmuCI	GTSAC	2 cut(s)	400, 1377
NsiI	ATGCAT	2 cut(s)	1174, 1182
NspI	RCATGY	2 cut(s)	1117, 1184
PaeI	GCATGC	2 cut(s)	1117, 1184
PagI	TCATGA	1 cut(s)	856
PciSI	GCTCTTC	2 cut(s)	1086, 1276
PcsI	WCGNNNNNNNCGW	1 cut(s)	201
PctI	GAATGC	2 cut(s)	438, 906
PfeI	GAWTC	1 cut(s)	66
PkrI	GCNGC	8 cut(s)	23, 202, 218, 792, 880, 941, 1065, 1186
Ple19I	CGATCG	1 cut(s)	982
PleI	GAGTC	6 cut(s)	296, 490, 817, 1137, 1386, 1411
PpsI	GAGTC	6 cut(s)	296, 490, 817, 1137, 1386, 1411
Ppu21I	YACGTR	1 cut(s)	1399
PshAI	GACNNNNGTC	1 cut(s)	1375
PsiI	TTATAA	1 cut(s)	285
Psp6I	CCWGG	3 cut(s)	248, 625, 1551
PspGI	CCWGG	3 cut(s)	248, 625, 1551
PspN4I	GGNNCC	4 cut(s)	277, 414, 549, 1107
PspPI	GGNCC	5 cut(s)	329, 581, 629, 1013, 1370
PstNI	CAGNNNCTG	1 cut(s)	499
PsuI	RGATCY	3 cut(s)	562, 568, 757
PvuI	CGATCG	1 cut(s)	982
RsaI	GTAC	2 cut(s)	527, 837
RsaNI	GTAC	2 cut(s)	526, 836
RseI	CAYNNNNRTG	1 cut(s)	1384
SalI	GTCGAC	2 cut(s)	299, 995
SapI	GCTCTTC	2 cut(s)	1086, 1276
SaqAI	TTAA	5 cut(s)	33, 309, 366, 963, 1248
SatI	GCNGC	8 cut(s)	22, 201, 217, 791, 879, 940, 1064, 1185
Sau3AI	GATC	6 cut(s)	343, 562, 568, 686, 757, 979
Sau96I	GGNCC	5 cut(s)	329, 581, 629, 1013, 1370
SchI	GAGTC	6 cut(s)	296, 490, 818, 1137, 1386, 1411
ScrFI	CCNGG	3 cut(s)	250, 627, 1553
SduI	GDGCHC	3 cut(s)	989, 1365, 1404
SfaNI	GCATC	3 cut(s)	719, 877, 1181
SfcI	CTRYAG	3 cut(s)	693, 1053, 1239
SinI	GGWCC	2 cut(s)	329, 1370
SmiMI	CAYNNNNRTG	1 cut(s)	1384
SpeI	ACTAGT	1 cut(s)	173
SphI	GCATGC	2 cut(s)	1117, 1184
SsiI	CCGC	3 cut(s)	108, 279, 572
SspI	AATATT	1 cut(s)	928
SspMI	CTAG	8 cut(s)	174, 503, 566, 824, 1139, 1544, 1569, 1585
StyD4I	CCNGG	3 cut(s)	248, 625, 1551
StyI	CCWWGG	4 cut(s)	325, 427, 448, 1385
TaaI	ACNGT	3 cut(s)	1035, 1192, 1483
TaiI	ACGT	3 cut(s)	480, 1346, 1401
TaqI	TCGA	3 cut(s)	27, 300, 996
TatI	WGTACW	2 cut(s)	525, 835
TfiI	GAWTC	1 cut(s)	66
Tru1I	TTAA	5 cut(s)	33, 309, 366, 963, 1248
Tru9I	TTAA	5 cut(s)	33, 309, 366, 963, 1248
TscAI	CASTG	3 cut(s)	1038, 1320, 1488
TseFI	GTSAC	2 cut(s)	400, 1377
TseI	GCWGC	8 cut(s)	21, 200, 216, 790, 878, 939, 1063, 1184
Tsp45I	GTSAC	2 cut(s)	400, 1377
TspDTI	ATGAA	6 cut(s)	84, 134, 845, 873, 907, 1190
TspGWI	ACGGA	1 cut(s)	1463
TspRI	CASTG	3 cut(s)	1038, 1320, 1488
VpaK11BI	GGWCC	2 cut(s)	329, 1370
XagI	CCTNNNNNAGG	1 cut(s)	431
XapI	RAATTY	3 cut(s)	57, 91, 488
XbaI	TCTAGA	1 cut(s)	565
XceI	RCATGY	2 cut(s)	1117, 1184
XcmI	CCANNNNNNNNNTGG	3 cut(s)	69, 639, 1093
XmiI	GTMKAC	2 cut(s)	300, 996
XspI	CTAG	8 cut(s)	174, 503, 566, 824, 1139, 1544, 1569, 1585
Zsp2I	ATGCAT	2 cut(s)	1174, 1182

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.