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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr3g0491441 |
| rosa_laevigata | RLG00000022841 |
| rosa_multiflora | Rmu_sc0006034.1_g000004 |
| rosa_rugosa | Rorug03G0249400 |
| rosa_samantha | Rh3AG298600 Rh3DG333100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 110, 331 |
| AcuI | CTGAAG | 1 cut(s) | 239 |
| AfaI | GTAC | 2 cut(s) | 17, 68 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 30 |
| AgsI | TTSAA | 1 cut(s) | 283 |
| AjnI | CCWGG | 1 cut(s) | 29 |
| AluBI | AGCT | 1 cut(s) | 223 |
| AluI | AGCT | 1 cut(s) | 223 |
| AoxI | GGCC | 1 cut(s) | 226 |
| AsuHPI | GGTGA | 1 cut(s) | 194 |
| BccI | CCATC | 5 cut(s) | 32, 146, 182, 281, 287 |
| BciT130I | CCWGG | 1 cut(s) | 31 |
| BfaI | CTAG | 1 cut(s) | 224 |
| BmcAI | AGTACT | 1 cut(s) | 17 |
| Bme1390I | CCNGG | 1 cut(s) | 31 |
| BmrFI | CCNGG | 1 cut(s) | 31 |
| BmsI | GCATC | 1 cut(s) | 75 |
| BsaBI | GATNNNNATC | 1 cut(s) | 263 |
| BsaJI | CCNNGG | 2 cut(s) | 29, 30 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 30 |
| Bse1I | ACTGG | 1 cut(s) | 244 |
| Bse8I | GATNNNNATC | 1 cut(s) | 263 |
| BseBI | CCWGG | 1 cut(s) | 31 |
| BseDI | CCNNGG | 2 cut(s) | 29, 30 |
| BseGI | GGATG | 5 cut(s) | 24, 157, 175, 193, 211 |
| BseJI | GATNNNNATC | 1 cut(s) | 263 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 30 |
| BseMII | CTCAG | 1 cut(s) | 66 |
| BseNI | ACTGG | 1 cut(s) | 244 |
| BshFI | GGCC | 1 cut(s) | 228 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 30 |
| BsnI | GGCC | 1 cut(s) | 228 |
| Bsp143I | GATC | 1 cut(s) | 126 |
| BspANI | GGCC | 1 cut(s) | 228 |
| BspCNI | CTCAG | 1 cut(s) | 65 |
| BsrI | ACTGG | 1 cut(s) | 244 |
| BssECI | CCNNGG | 2 cut(s) | 29, 30 |
| BssMI | GATC | 1 cut(s) | 126 |
| Bst2UI | CCWGG | 1 cut(s) | 31 |
| Bst4CI | ACNGT | 1 cut(s) | 15 |
| BstDEI | CTNAG | 1 cut(s) | 52 |
| BstF5I | GGATG | 5 cut(s) | 24, 157, 175, 193, 211 |
| BstKTI | GATC | 1 cut(s) | 129 |
| BstMBI | GATC | 1 cut(s) | 126 |
| BstNI | CCWGG | 1 cut(s) | 31 |
| BstSCI | CCNGG | 1 cut(s) | 29 |
| BsuRI | GGCC | 1 cut(s) | 228 |
| BtsCI | GGATG | 5 cut(s) | 24, 157, 175, 193, 211 |
| Csp6I | GTAC | 2 cut(s) | 16, 67 |
| CviAII | CATG | 2 cut(s) | 41, 200 |
| CviJI | RGCY | 3 cut(s) | 192, 223, 228 |
| CviKI_1 | RGCY | 3 cut(s) | 192, 223, 228 |
| CviQI | GTAC | 2 cut(s) | 16, 67 |
| DdeI | CTNAG | 1 cut(s) | 52 |
| DpnI | GATC | 1 cut(s) | 128 |
| DpnII | GATC | 1 cut(s) | 126 |
| Eco147I | AGGCCT | 1 cut(s) | 228 |
| Eco57I | CTGAAG | 1 cut(s) | 239 |
| EcoRII | CCWGG | 1 cut(s) | 29 |
| FaeI | CATG | 2 cut(s) | 44, 203 |
| FaiI | YATR | 7 cut(s) | 42, 110, 147, 195, 201, 276, 331 |
| FatI | CATG | 2 cut(s) | 40, 199 |
| FokI | GGATG | 5 cut(s) | 11, 164, 182, 200, 218 |
| FspBI | CTAG | 1 cut(s) | 224 |
| HaeIII | GGCC | 1 cut(s) | 228 |
| Hin1II | CATG | 2 cut(s) | 44, 203 |
| HinfI | GANTC | 1 cut(s) | 259 |
| HphI | GGTGA | 1 cut(s) | 194 |
| Hpy188I | TCNGA | 2 cut(s) | 55, 258 |
| HpyCH4III | ACNGT | 1 cut(s) | 15 |
| HpyCH4V | TGCA | 2 cut(s) | 88, 199 |
| HpyF3I | CTNAG | 1 cut(s) | 52 |
| Hsp92II | CATG | 2 cut(s) | 44, 203 |
| Kzo9I | GATC | 1 cut(s) | 126 |
| LpnPI | CCDG | 4 cut(s) | 16, 43, 253, 257 |
| LweI | GCATC | 1 cut(s) | 75 |
| MaeI | CTAG | 1 cut(s) | 224 |
| MalI | GATC | 1 cut(s) | 128 |
| MboI | GATC | 1 cut(s) | 126 |
| MboII | GAAGA | 2 cut(s) | 103, 245 |
| MluCI | AATT | 1 cut(s) | 95 |
| MmeI | TCCRAC | 1 cut(s) | 301 |
| MnlI | CCTC | 5 cut(s) | 160, 178, 202, 210, 317 |
| MseI | TTAA | 1 cut(s) | 315 |
| MslI | CAYNNNNRTG | 1 cut(s) | 204 |
| MspR9I | CCNGG | 1 cut(s) | 31 |
| MvaI | CCWGG | 1 cut(s) | 31 |
| NdeII | GATC | 1 cut(s) | 126 |
| NlaIII | CATG | 2 cut(s) | 44, 203 |
| PasI | CCCWGGG | 1 cut(s) | 30 |
| PceI | AGGCCT | 1 cut(s) | 228 |
| PfeI | GAWTC | 1 cut(s) | 259 |
| PflFI | GACNNNGTC | 1 cut(s) | 41 |
| PsiI | TTATAA | 2 cut(s) | 110, 331 |
| Psp6I | CCWGG | 1 cut(s) | 29 |
| PspGI | CCWGG | 1 cut(s) | 29 |
| PsyI | GACNNNGTC | 1 cut(s) | 41 |
| RsaI | GTAC | 2 cut(s) | 17, 68 |
| RsaNI | GTAC | 2 cut(s) | 16, 67 |
| RseI | CAYNNNNRTG | 1 cut(s) | 204 |
| SaqAI | TTAA | 1 cut(s) | 315 |
| Sau3AI | GATC | 1 cut(s) | 126 |
| ScaI | AGTACT | 1 cut(s) | 17 |
| ScrFI | CCNGG | 1 cut(s) | 31 |
| SetI | ASST | 4 cut(s) | 75, 225, 321, 328 |
| SfaNI | GCATC | 1 cut(s) | 75 |
| SgeI | CNNG | 9 cut(s) | 42, 43, 53, 82, 133, 212, 236, 256, 280 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 204 |
| Sse9I | AATT | 1 cut(s) | 95 |
| SseBI | AGGCCT | 1 cut(s) | 228 |
| SspI | AATATT | 3 cut(s) | 59, 78, 304 |
| SspMI | CTAG | 1 cut(s) | 224 |
| StuI | AGGCCT | 1 cut(s) | 228 |
| StyD4I | CCNGG | 1 cut(s) | 29 |
| TaaI | ACNGT | 1 cut(s) | 15 |
| TasI | AATT | 1 cut(s) | 95 |
| TatI | WGTACW | 2 cut(s) | 15, 66 |
| TfiI | GAWTC | 1 cut(s) | 259 |
| Tru1I | TTAA | 1 cut(s) | 315 |
| Tru9I | TTAA | 1 cut(s) | 315 |
| TspDTI | ATGAA | 2 cut(s) | 128, 227 |
| Tth111I | GACNNNGTC | 1 cut(s) | 41 |
| XspI | CTAG | 1 cut(s) | 224 |
| ZrmI | AGTACT | 1 cut(s) | 17 |