No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr3g0491441 |
| rosa_laevigata | RLG00000022841 |
| rosa_multiflora | Rmu_sc0006034.1_g000004 |
| rosa_rugosa | Rorug03G0249400 |
| rosa_samantha | Rh3AG298600 Rh3DG333100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 23, 54 |
| AcoI | YGGCCR | 1 cut(s) | 55 |
| AfaI | GTAC | 1 cut(s) | 180 |
| AgsI | TTSAA | 2 cut(s) | 116, 152 |
| AleI | CACNNNNGTG | 1 cut(s) | 165 |
| AluBI | AGCT | 1 cut(s) | 215 |
| AluI | AGCT | 1 cut(s) | 215 |
| AoxI | GGCC | 1 cut(s) | 55 |
| AsuHPI | GGTGA | 1 cut(s) | 95 |
| BaeGI | GKGCMC | 1 cut(s) | 162 |
| BccI | CCATC | 1 cut(s) | 80 |
| BisI | GCNGC | 1 cut(s) | 55 |
| BlsI | GCNGC | 1 cut(s) | 56 |
| BmiI | GGNNCC | 1 cut(s) | 174 |
| BmsI | GCATC | 2 cut(s) | 19, 244 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 82, 112 |
| BseGI | GGATG | 2 cut(s) | 34, 52 |
| BseRI | GAGGAG | 1 cut(s) | 308 |
| BseSI | GKGCMC | 1 cut(s) | 162 |
| Bsh1285I | CGRYCG | 1 cut(s) | 166 |
| BshFI | GGCC | 1 cut(s) | 57 |
| BsiEI | CGRYCG | 1 cut(s) | 166 |
| BsnI | GGCC | 1 cut(s) | 57 |
| Bsp1286I | GDGCHC | 1 cut(s) | 162 |
| Bsp143I | GATC | 1 cut(s) | 276 |
| BspACI | CCGC | 2 cut(s) | 23, 54 |
| BspANI | GGCC | 1 cut(s) | 57 |
| BspLI | GGNNCC | 1 cut(s) | 174 |
| BssMI | GATC | 1 cut(s) | 276 |
| Bst4CI | ACNGT | 1 cut(s) | 164 |
| BstF5I | GGATG | 2 cut(s) | 34, 52 |
| BstKTI | GATC | 1 cut(s) | 279 |
| BstMBI | GATC | 1 cut(s) | 276 |
| BstMCI | CGRYCG | 1 cut(s) | 166 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 29 |
| BstSLI | GKGCMC | 1 cut(s) | 162 |
| BsuRI | GGCC | 1 cut(s) | 57 |
| BtsCI | GGATG | 2 cut(s) | 34, 52 |
| CseI | GACGC | 1 cut(s) | 224 |
| Csp6I | GTAC | 1 cut(s) | 179 |
| CviAII | CATG | 1 cut(s) | 230 |
| CviJI | RGCY | 3 cut(s) | 57, 187, 215 |
| CviKI_1 | RGCY | 3 cut(s) | 57, 187, 215 |
| CviQI | GTAC | 1 cut(s) | 179 |
| DpnI | GATC | 1 cut(s) | 278 |
| DpnII | GATC | 1 cut(s) | 276 |
| EaeI | YGGCCR | 1 cut(s) | 55 |
| EcoT22I | ATGCAT | 1 cut(s) | 12 |
| FaeI | CATG | 1 cut(s) | 233 |
| FaiI | YATR | 9 cut(s) | 12, 20, 60, 210, 231, 249, 290, 302, 306 |
| FatI | CATG | 1 cut(s) | 229 |
| FauI | CCCGC | 1 cut(s) | 16 |
| Fnu4HI | GCNGC | 1 cut(s) | 55 |
| FokI | GGATG | 2 cut(s) | 41, 59 |
| Fsp4HI | GCNGC | 1 cut(s) | 55 |
| GluI | GCNGC | 1 cut(s) | 55 |
| HaeIII | GGCC | 1 cut(s) | 57 |
| HgaI | GACGC | 1 cut(s) | 224 |
| Hin1II | CATG | 1 cut(s) | 233 |
| HphI | GGTGA | 1 cut(s) | 95 |
| Hpy188I | TCNGA | 2 cut(s) | 219, 273 |
| Hpy188III | TCNNGA | 1 cut(s) | 239 |
| HpyAV | CCTTC | 3 cut(s) | 110, 146, 268 |
| HpyCH4III | ACNGT | 1 cut(s) | 164 |
| HpyCH4IV | ACGT | 1 cut(s) | 181 |
| HpyCH4V | TGCA | 2 cut(s) | 4, 10 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 29 |
| HpySE526I | ACGT | 1 cut(s) | 181 |
| Hsp92II | CATG | 1 cut(s) | 233 |
| Kzo9I | GATC | 1 cut(s) | 276 |
| LpnPI | CCDG | 3 cut(s) | 18, 189, 252 |
| LweI | GCATC | 2 cut(s) | 19, 244 |
| MaeII | ACGT | 1 cut(s) | 181 |
| MalI | GATC | 1 cut(s) | 278 |
| MboI | GATC | 1 cut(s) | 276 |
| MboII | GAAGA | 3 cut(s) | 116, 119, 212 |
| MhlI | GDGCHC | 1 cut(s) | 162 |
| MluCI | AATT | 2 cut(s) | 39, 263 |
| MnlI | CCTC | 4 cut(s) | 43, 73, 94, 286 |
| Mph1103I | ATGCAT | 1 cut(s) | 12 |
| MslI | CAYNNNNRTG | 1 cut(s) | 165 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 29 |
| NdeII | GATC | 1 cut(s) | 276 |
| NlaIII | CATG | 1 cut(s) | 233 |
| NlaIV | GGNNCC | 1 cut(s) | 174 |
| NsiI | ATGCAT | 1 cut(s) | 12 |
| OliI | CACNNNNGTG | 1 cut(s) | 165 |
| PkrI | GCNGC | 1 cut(s) | 56 |
| PspN4I | GGNNCC | 1 cut(s) | 174 |
| RsaI | GTAC | 1 cut(s) | 180 |
| RsaNI | GTAC | 1 cut(s) | 179 |
| RseI | CAYNNNNRTG | 1 cut(s) | 165 |
| SatI | GCNGC | 1 cut(s) | 55 |
| Sau3AI | GATC | 1 cut(s) | 276 |
| SduI | GDGCHC | 1 cut(s) | 162 |
| SetI | ASST | 3 cut(s) | 157, 184, 217 |
| SfaNI | GCATC | 2 cut(s) | 19, 244 |
| SgeI | CNNG | 9 cut(s) | 36, 45, 80, 140, 173, 179, 188, 242, 251 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 165 |
| Sse9I | AATT | 2 cut(s) | 39, 263 |
| SsiI | CCGC | 2 cut(s) | 23, 54 |
| TaaI | ACNGT | 1 cut(s) | 164 |
| TaiI | ACGT | 1 cut(s) | 184 |
| TasI | AATT | 2 cut(s) | 39, 263 |
| TauI | GCSGC | 1 cut(s) | 57 |
| TspDTI | ATGAA | 3 cut(s) | 78, 213, 225 |
| Zsp2I | ATGCAT | 1 cut(s) | 12 |