Rh3AG298600

Belongs to the short-chain dehydrogenases reductases (SDR) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3A
OG0020520
Physical Location & Seq
Reverse (-)
36509572 .. 36517631
8060 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3AG298600.1

Sequence Viewer

Length: 2244 bp
ATGTCGAAACTCCAAAAAGAAGAGAAAGAAGCAGAGGAGGCGGCCGCTCGGCCTCCGCCTTCTGCTCCGTCGCCGGCGACGAGTGCGACTCTGAGTGACTCAACGAAATCAAAAGAAGGATCCGCAACCTATGACAAGAGCGGGAGTGCCGAATTGGCGAAGAAAGGTTCATATTCTCTGGAGAAGTGTATGGATATGTGCGCGACACCGCCGGTGAAACAGCAGAGGCACGACGAAGCTCCAGATAGCGCACCGAAGAAGACGATGTCGCATCAAAGTTTGAAGGAATCTTCGGCGGTTATGGTGGAGGAGGCCTGGGGGAGACTGAAGAAGTCCTTCGTTTACTACAGAGGCAAGCCGGTGGCGATTCTTGCTGCTACGGATCCAATGGCGGAGGCTTTGAATTACAATCAGGTATCTGTGAGAAATTTTGCTCCTAGTGGCTTGGCCTGCCTCATGAAGGATCCAGTAGTGCCAGAGATAGTAAAGAACTCTCTCCTAAAGACCCTGCACCTCCAAGGTCGGGAGAAAATGGTTGGTAATTACTTTACACTTGGAGAAGGTGTTCTTCCTGCGACCTCTAAGGTCTCATATGATTCTTTATCCGCTCAAGATACTGTGCGACTTTGCAGAGCGGGGGGTGCTGGTGGAATTGGGGATGAGGGCGGCCATGATGAACTTGATGAGAGTGAGGGTGATGGGAGTGAGAGTGAAGAAGAAGAAGAAGTTGAAGGAGAAGAGCAAGAAGAGGATATTGATGATGTTGAAGGTGGGCACGGCCGTGTGGTTCCTGTACGTTGGCTTATTAGAAATGGAGAAGTGTATGAAGCTCTGATTGTTGACCATGTGCGTCCAGATGATTATGCTGATGCCTTCCAATTTTATCAGATGATCCTACAGATTATGGAGGAGAATATACATGAAAATGAGATAGTGCATTATAAAATTGTATGTTGGAATGATGACATAGAGGATATGGGGAATGAAGGTGACGGACTAACAAAATTGTTCTGTCCCTACACAGAAAACAATGACTATGCTCTCTTTAGCTTTCTTCTTGATTGTGTGGACTTTATCAGAATGCCTTATGAACCTTACTACACCATCCCCAGGGCAGAGGAGTTGCTTCGAATATTTCGAGTGCAAGGTAATATTGCTGATGCAGAAGAAATTGGAGATTGTTATAATGAAATCCTTGCTGATCTGTATCCCTCAAGGAATGCTCTCCACTTTGATGTGCTTGATGCAATACATAGCTGCTGGGTACTCAACTCTCCAAATCCCCTACCACAAGGGTATAGGGTTTTTTATGTCACAGCTCTCCCTAATGGGGATGGGGATGGAGATGAGGATGTGGATGTTGGTGAGGATGGCAATGTGCATGGGGATGAGGATTGGAGGGAGCTAGGCCTAAACATTCCTTTCCAGTTGTTTCTTCAGATTCTCATCAGGGTCTATGTGTTCGACGATGCAGATGGTGCTAATATACCACTATTTCATGCTGGAGTTAAGGAAATCCCCACTGCCAAAATTGATGCCATGGAGTTGGATCTTAGTTCATTGTCATCTGTGAGGAAATTTGCATCAGATTACAAATCCTCTGGTCGTCCTCTAAACATCTTAATTAACAATGCAGGAATTATGGCGACCCCATTCTTGCTTTCCAAAGATAAGATTGAACTTCAGTTTGCCACAAACCATATAGCTAATCTTGTTTCAAAACTATCAGCTGTCAGAATGTCATTTTCTATTGACAAATCTTTTGGGACTATGAAAAAGACTGCACGTTCAAGTAGCAAAGAAGGGAGAATTGTAAATGCATCCTCTGAAGCTCACCGGTATGCATATCGTGAAGGAATCCGTTTTGATAGAATCAACGACCCATCAGGGTACAGTAGTTGGCCTGAGTATGGTCAATCAAAGCTAGCTAACATTTTGCATGCCAAAGAACTTTCAAAACAAATAAAGGAAGATGGGGCAAATATAACTGCAAATGCACTTCACCCTGGTGTAATTCCCACCAATCTTTTCCATCATAACATTGTTATCAATGGGCTTGTTAATGTGCTCGGTAGAGTTGTGCTTAAAAATGTTCAGCAGGGAGCAGCAACAACTTGCTATGTGGCATTGCATCCGCAAGCTAAAGGGGAAGATAATCTAGGCAGAGCTTTCATACCAGCGATGGAGGCGATGAATACAATGCTTCCGTTGCCTGAGACCTTTAAGAGAGGATGTGCAAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00830 ko01100 map00830 map01100
Pfam Domains
Protein Families
adh_short

Protein Analysis

747

Amino Acids

82.48

Weight (kDa)

4.87

Isoelectric Point (pI)

49.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_100 PF12899 105 - 199 7.6e-19 Alkaline and neutral invertase
adh_short PF00106 503 - 617 3.4e-06 short chain dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0020520)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr3g0491441
rosa_laevigata RLG00000022841
rosa_multiflora Rmu_sc0006034.1_g000004
rosa_rugosa Rorug03G0249400
rosa_samantha Rh3AG298600 Rh3DG333100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 942, 1185
AccBSI CCGCTC 4 cut(s) 47, 141, 608, 635
AccII CGCG 1 cut(s) 203
AclWI GGATC 8 cut(s) 114, 127, 377, 390, 458, 471, 886, 1557
AcoI YGGCCR 3 cut(s) 42, 667, 778
AcsI RAATTY 2 cut(s) 427, 1577
AcuI CTGAAG 4 cut(s) 347, 1421, 1667, 1848
AfaI GTAC 3 cut(s) 795, 1266, 1892
AfiI CCNNNNNNNGG 5 cut(s) 460, 523, 1110, 1330, 1910
AgeI ACCGGT 1 cut(s) 1836
AgsI TTSAA 8 cut(s) 283, 403, 731, 767, 1679, 1719, 1791, 1956
AjnI CCWGG 3 cut(s) 314, 1109, 2005
AleI CACNNNNGTG 2 cut(s) 780, 2007
AloI GAACNNNNNNTCC 2 cut(s) 549, 581
Alw21I GWGCWC 1 cut(s) 2070
Alw26I GTCTC 3 cut(s) 316, 592, 2210
AlwI GGATC 8 cut(s) 114, 127, 377, 390, 458, 471, 886, 1557
AoxI GGCC 8 cut(s) 42, 50, 312, 447, 667, 778, 1408, 1901
ApeKI GCWGC 3 cut(s) 374, 1257, 2105
ApoI RAATTY 2 cut(s) 427, 1577
ArsI GACNNNNNNTTYG 2 cut(s) 1745, 1777
AsiGI ACCGGT 1 cut(s) 1836
Asp700I GAANNNNTTC 2 cut(s) 335, 564
AspLEI GCGC 2 cut(s) 203, 251
AsuHPI GGTGA 6 cut(s) 226, 707, 1001, 1376, 1826, 1994
AsuII TTCGAA 1 cut(s) 1129
AsuNHI GCTAGC 1 cut(s) 1924
BaeGI GKGCMC 1 cut(s) 777
BaeI ACNNNNGTAYC 2 cut(s) 1882, 1915
BamHI GGATCC 3 cut(s) 119, 382, 463
BbsI GAAGAC 1 cut(s) 266
Bbv12I GWGCWC 1 cut(s) 2070
BbvI GCAGC 3 cut(s) 361, 1244, 2117
BceAI ACGGC 2 cut(s) 765, 793
BciT130I CCWGG 3 cut(s) 316, 1111, 2007
BciVI GTATCC 1 cut(s) 1218
BcoDI GTCTC 3 cut(s) 316, 592, 2210
BfaI CTAG 4 cut(s) 438, 1406, 1925, 2159
BfmI CTRYAG 2 cut(s) 346, 896
BfuI GTATCC 1 cut(s) 1218
BglI GCCNNNNNGGC 1 cut(s) 155
BisI GCNGC 6 cut(s) 42, 45, 375, 667, 1258, 2106
BlsI GCNGC 6 cut(s) 43, 46, 376, 668, 1259, 2107
Bme1390I CCNGG 3 cut(s) 316, 1111, 2007
BmiI GGNNCC 4 cut(s) 121, 384, 465, 789
BmrFI CCNGG 3 cut(s) 316, 1111, 2007
BmsI GCATC 9 cut(s) 280, 859, 1150, 1234, 1459, 1525, 1592, 1829, 2140
BmtI GCTAGC 1 cut(s) 1928
BpiI GAAGAC 1 cut(s) 266
BplI GAGNNNNNCTC 2 cut(s) 73, 105
BpmI CTGGAG 3 cut(s) 200, 225, 1524
Bpu14I TTCGAA 1 cut(s) 1129
BpuEI CTTGAG 2 cut(s) 594, 1198
BsaBI GATNNNNATC 2 cut(s) 1206, 1445
BsaI GGTCTC 2 cut(s) 592, 2210
BsaJI CCNNGG 6 cut(s) 315, 517, 1109, 1110, 1539, 2005
BsaWI WCCGGW 1 cut(s) 1836
BsaXI ACNNNNNCTCC 4 cut(s) 549, 579, 694, 724
Bsc4I CCNNNNNNNGG 5 cut(s) 460, 523, 1110, 1330, 1910
Bse118I RCCGGY 4 cut(s) 73, 211, 358, 1836
Bse1I ACTGG 2 cut(s) 467, 1426
Bse3DI GCAATG 2 cut(s) 1381, 2126
Bse8I GATNNNNATC 2 cut(s) 1206, 1445
BseBI CCWGG 3 cut(s) 316, 1111, 2007
BseDI CCNNGG 6 cut(s) 315, 517, 1109, 1110, 1539, 2005
BseJI GATNNNNATC 2 cut(s) 1206, 1445
BseLI CCNNNNNNNGG 5 cut(s) 460, 523, 1110, 1330, 1910
BseMI GCAATG 2 cut(s) 1381, 2126
BseMII CTCAG 3 cut(s) 83, 1896, 2205
BseNI ACTGG 2 cut(s) 467, 1426
BseRI GAGGAG 4 cut(s) 50, 323, 923, 1133
BseSI GKGCMC 1 cut(s) 777
BseX3I CGGCCG 2 cut(s) 42, 778
BseXI GCAGC 3 cut(s) 361, 1244, 2117
BseYI CCCAGC 1 cut(s) 1260
BsgI GTGCAG 2 cut(s) 494, 1767
Bsh1236I CGCG 1 cut(s) 203
Bsh1285I CGRYCG 2 cut(s) 45, 781
BshFI GGCC 8 cut(s) 44, 52, 314, 449, 669, 780, 1410, 1903
BshTI ACCGGT 1 cut(s) 1836
BsiEI CGRYCG 2 cut(s) 45, 781
BsiHKAI GWGCWC 1 cut(s) 2070
BsiSI CCGG 4 cut(s) 74, 212, 359, 1837
BslFI GGGAC 2 cut(s) 999, 1780
BslI CCNNNNNNNGG 5 cut(s) 460, 523, 1110, 1330, 1910
BsmAI GTCTC 3 cut(s) 316, 592, 2210
BsmFI GGGAC 2 cut(s) 999, 1780
BsmI GAATGC 2 cut(s) 1086, 1225
BsnI GGCC 8 cut(s) 44, 52, 314, 449, 669, 780, 1410, 1903
Bso31I GGTCTC 2 cut(s) 592, 2210
Bsp119I TTCGAA 1 cut(s) 1129
Bsp1286I GDGCHC 2 cut(s) 777, 2070
Bsp143I GATC 6 cut(s) 119, 382, 463, 891, 1201, 1549
Bsp19I CCATGG 1 cut(s) 1539
BspANI GGCC 8 cut(s) 44, 52, 314, 449, 669, 780, 1410, 1903
BspCNI CTCAG 3 cut(s) 84, 1897, 2206
BspFNI CGCG 1 cut(s) 203
BspHI TCATGA 1 cut(s) 456
BspLI GGNNCC 4 cut(s) 121, 384, 465, 789
BspOI GCTAGC 1 cut(s) 1928
BspPI GGATC 8 cut(s) 114, 127, 377, 390, 458, 471, 886, 1557
BspQI GCTCTTC 1 cut(s) 732
BspT104I TTCGAA 1 cut(s) 1129
BspTNI GGTCTC 2 cut(s) 592, 2210
BsrBI CCGCTC 4 cut(s) 47, 141, 608, 635
BsrDI GCAATG 2 cut(s) 1381, 2126
BsrFI RCCGGY 4 cut(s) 73, 211, 358, 1836
BsrI ACTGG 2 cut(s) 467, 1426
BssAI RCCGGY 4 cut(s) 73, 211, 358, 1836
BssECI CCNNGG 6 cut(s) 315, 517, 1109, 1110, 1539, 2005
BssMI GATC 6 cut(s) 119, 382, 463, 891, 1201, 1549
BssT1I CCWWGG 2 cut(s) 517, 1539
Bst2UI CCWGG 3 cut(s) 316, 1111, 2007
Bst4CI ACNGT 2 cut(s) 619, 1895
Bst6I CTCTTC 3 cut(s) 15, 732, 741
BstAPI GCANNNNNTGC 1 cut(s) 1478
BstBI TTCGAA 1 cut(s) 1129
BstC8I GCNNGC 6 cut(s) 75, 356, 451, 1926, 1941, 2139
BstDEI CTNAG 5 cut(s) 92, 582, 1553, 1905, 2214
BstDSI CCRYGG 1 cut(s) 1539
BstENI CCTNNNNNAGG 1 cut(s) 458
BstFNI CGCG 1 cut(s) 203
BstHHI GCGC 2 cut(s) 203, 251
BstKTI GATC 6 cut(s) 122, 385, 466, 894, 1204, 1552
BstMAI GTCTC 3 cut(s) 316, 592, 2210
BstMBI GATC 6 cut(s) 119, 382, 463, 891, 1201, 1549
BstMCI CGRYCG 2 cut(s) 45, 781
BstMWI GCNNNNNNNGC 9 cut(s) 38, 83, 155, 371, 450, 641, 1478, 2186, 2209
BstNI CCWGG 3 cut(s) 316, 1111, 2007
BstNSI RCATGY 1 cut(s) 1943
BstSCI CCNGG 3 cut(s) 314, 1109, 2005
BstSFI CTRYAG 2 cut(s) 346, 896
BstSLI GKGCMC 1 cut(s) 777
BstUI CGCG 1 cut(s) 203
BstV1I GCAGC 3 cut(s) 361, 1244, 2117
BstV2I GAAGAC 1 cut(s) 266
BstX2I RGATCY 4 cut(s) 119, 382, 463, 1549
BstXI CCANNNNNNTGG 1 cut(s) 1546
BstYI RGATCY 4 cut(s) 119, 382, 463, 1549
BstZI CGGCCG 2 cut(s) 42, 778
BsuI GTATCC 1 cut(s) 1218
BsuRI GGCC 8 cut(s) 44, 52, 314, 449, 669, 780, 1410, 1903
BtgI CCRYGG 1 cut(s) 1539
BtgZI GCGATG 2 cut(s) 2195, 2204
BtsI GCAGTG 1 cut(s) 1521
BtsIMutI CAGTG 1 cut(s) 1521
Cac8I GCNNGC 6 cut(s) 75, 356, 451, 1926, 1941, 2139
CciI TCATGA 1 cut(s) 456
CciNI GCGGCCGC 1 cut(s) 42
CfoI GCGC 2 cut(s) 203, 251
Cfr10I RCCGGY 4 cut(s) 73, 211, 358, 1836
CseI GACGC 1 cut(s) 839
Csp6I GTAC 3 cut(s) 794, 1265, 1891
CspAI ACCGGT 1 cut(s) 1836
CviAII CATG 8 cut(s) 457, 671, 845, 920, 1382, 1499, 1540, 1940
CviQI GTAC 3 cut(s) 794, 1265, 1891
DdeI CTNAG 5 cut(s) 92, 582, 1553, 1905, 2214
DpnI GATC 6 cut(s) 121, 384, 465, 893, 1203, 1551
DpnII GATC 6 cut(s) 119, 382, 463, 891, 1201, 1549
EaeI YGGCCR 3 cut(s) 42, 667, 778
EagI CGGCCG 2 cut(s) 42, 778
Eam1104I CTCTTC 3 cut(s) 15, 732, 741
EarI CTCTTC 3 cut(s) 15, 732, 741
EciI GGCGGA 2 cut(s) 45, 407
EclXI CGGCCG 2 cut(s) 42, 778
Eco130I CCWWGG 2 cut(s) 517, 1539
Eco147I AGGCCT 2 cut(s) 314, 1410
Eco31I GGTCTC 2 cut(s) 592, 2210
Eco52I CGGCCG 2 cut(s) 42, 778
Eco57I CTGAAG 4 cut(s) 347, 1421, 1667, 1848
EcoNI CCTNNNNNAGG 1 cut(s) 458
EcoRII CCWGG 3 cut(s) 314, 1109, 2005
EcoT14I CCWWGG 2 cut(s) 517, 1539
EcoT22I ATGCAT 2 cut(s) 1822, 1846
ErhI CCWWGG 2 cut(s) 517, 1539
FaeI CATG 8 cut(s) 460, 674, 848, 923, 1385, 1502, 1543, 1943
FalI AAGNNNNNCTT 4 cut(s) 320, 352, 552, 584
FaqI GGGAC 2 cut(s) 999, 1780
FatI CATG 8 cut(s) 456, 670, 844, 919, 1381, 1498, 1539, 1939
FauI CCCGC 2 cut(s) 134, 628
FauNDI CATATG 1 cut(s) 592
Fnu4HI GCNGC 6 cut(s) 42, 45, 375, 667, 1258, 2106
Fsp4HI GCNGC 6 cut(s) 42, 45, 375, 667, 1258, 2106
FspBI CTAG 4 cut(s) 438, 1406, 1925, 2159
GlaI GCGC 2 cut(s) 202, 250
GluI GCNGC 6 cut(s) 42, 45, 375, 667, 1258, 2106
GsaI CCCAGC 1 cut(s) 1264
GsuI CTGGAG 3 cut(s) 200, 225, 1524
HaeIII GGCC 8 cut(s) 44, 52, 314, 449, 669, 780, 1410, 1903
HapII CCGG 4 cut(s) 74, 212, 359, 1837
HgaI GACGC 1 cut(s) 839
HhaI GCGC 2 cut(s) 203, 251
Hin1II CATG 8 cut(s) 460, 674, 848, 923, 1385, 1502, 1543, 1943
Hin6I GCGC 2 cut(s) 201, 249
HinP1I GCGC 2 cut(s) 201, 249
HincII GTYRAC 1 cut(s) 841
HindII GTYRAC 1 cut(s) 841
HinfI GANTC 8 cut(s) 88, 98, 287, 367, 596, 1441, 1857, 1872
HpaII CCGG 4 cut(s) 74, 212, 359, 1837
HphI GGTGA 6 cut(s) 226, 707, 1001, 1376, 1826, 1994
Hpy166II GTNNAC 3 cut(s) 343, 841, 1069
Hpy188I TCNGA 8 cut(s) 93, 834, 888, 1079, 1440, 1588, 1736, 1828
Hpy188III TCNNGA 8 cut(s) 179, 242, 457, 524, 611, 854, 1058, 1850
Hpy8I GTNNAC 3 cut(s) 343, 841, 1069
Hpy99I CGWCG 4 cut(s) 73, 82, 236, 1469
HpyCH4III ACNGT 2 cut(s) 619, 1895
HpyCH4IV ACGT 2 cut(s) 796, 1786
HpyF10VI GCNNNNNNNGC 9 cut(s) 38, 83, 155, 371, 450, 641, 1478, 2186, 2209
HpyF3I CTNAG 5 cut(s) 92, 582, 1553, 1905, 2214
HpySE526I ACGT 2 cut(s) 796, 1786
Hsp92II CATG 8 cut(s) 460, 674, 848, 923, 1385, 1502, 1543, 1943
HspAI GCGC 2 cut(s) 201, 249
KroI GCCGGC 1 cut(s) 73
KroNI GCCGGC 1 cut(s) 75
Kzo9I GATC 6 cut(s) 119, 382, 463, 891, 1201, 1549
LguI GCTCTTC 1 cut(s) 732
LmnI GCTCC 5 cut(s) 70, 244, 439, 1402, 2102
Lsp1109I GCAGC 3 cut(s) 361, 1244, 2117
LweI GCATC 9 cut(s) 280, 859, 1150, 1234, 1459, 1525, 1592, 1829, 2140
MaeI CTAG 4 cut(s) 438, 1406, 1925, 2159
MaeII ACGT 2 cut(s) 796, 1786
MaeIII GTNAC 3 cut(s) 95, 989, 1312
MalI GATC 6 cut(s) 121, 384, 465, 893, 1203, 1551
MbiI CCGCTC 4 cut(s) 47, 141, 608, 635
MboI GATC 6 cut(s) 119, 382, 463, 891, 1201, 1549
MflI RGATCY 4 cut(s) 119, 382, 463, 1549
MhlI GDGCHC 2 cut(s) 777, 2070
MlyI GAGTC 2 cut(s) 82, 92
MmeI TCCRAC 2 cut(s) 935, 1527
Mph1103I ATGCAT 2 cut(s) 1822, 1846
MreI CGCCGGCG 1 cut(s) 73
MroNI GCCGGC 1 cut(s) 73
MroXI GAANNNNTTC 2 cut(s) 335, 564
MseI TTAA 6 cut(s) 1509, 1622, 1626, 2061, 2085, 2223
MslI CAYNNNNRTG 6 cut(s) 780, 924, 1233, 1386, 1839, 2007
MspA1I CMGCKG 1 cut(s) 1730
MspI CCGG 4 cut(s) 74, 212, 359, 1837
MspR9I CCNGG 3 cut(s) 316, 1111, 2007
Mva1269I GAATGC 2 cut(s) 1086, 1225
MvaI CCWGG 3 cut(s) 316, 1111, 2007
MvnI CGCG 1 cut(s) 203
MwoI GCNNNNNNNGC 9 cut(s) 38, 83, 155, 371, 450, 641, 1478, 2186, 2209
NaeI GCCGGC 1 cut(s) 75
NcoI CCATGG 1 cut(s) 1539
NdeI CATATG 1 cut(s) 592
NdeII GATC 6 cut(s) 119, 382, 463, 891, 1201, 1549
NgoMIV GCCGGC 1 cut(s) 73
NheI GCTAGC 1 cut(s) 1924
NlaIII CATG 8 cut(s) 460, 674, 848, 923, 1385, 1502, 1543, 1943
NlaIV GGNNCC 4 cut(s) 121, 384, 465, 789
NmeAIII GCCGAG 1 cut(s) 28
NmuCI GTSAC 3 cut(s) 95, 989, 1312
NotI GCGGCCGC 1 cut(s) 42
NsiI ATGCAT 2 cut(s) 1822, 1846
NspI RCATGY 1 cut(s) 1943
NspV TTCGAA 1 cut(s) 1129
OliI CACNNNNGTG 2 cut(s) 780, 2007
PacI TTAATTAA 1 cut(s) 1626
PaeI GCATGC 1 cut(s) 1943
PagI TCATGA 1 cut(s) 456
PasI CCCWGGG 1 cut(s) 1110
PceI AGGCCT 2 cut(s) 314, 1410
PciSI GCTCTTC 1 cut(s) 732
PcsI WCGNNNNNNNCGW 2 cut(s) 77, 1135
PctI GAATGC 2 cut(s) 1086, 1225
PdiI GCCGGC 1 cut(s) 75
PdmI GAANNNNTTC 2 cut(s) 335, 564
PfeI GAWTC 6 cut(s) 287, 367, 596, 1441, 1857, 1872
PflFI GACNNNGTC 1 cut(s) 265
PinAI ACCGGT 1 cut(s) 1836
PkrI GCNGC 6 cut(s) 43, 46, 376, 668, 1259, 2107
PleI GAGTC 2 cut(s) 82, 92
PpsI GAGTC 2 cut(s) 82, 92
PsiI TTATAA 2 cut(s) 942, 1185
Psp6I CCWGG 3 cut(s) 314, 1109, 2005
PspFI CCCAGC 1 cut(s) 1260
PspGI CCWGG 3 cut(s) 314, 1109, 2005
PspN4I GGNNCC 4 cut(s) 121, 384, 465, 789
PsuI RGATCY 4 cut(s) 119, 382, 463, 1549
PsyI GACNNNGTC 1 cut(s) 265
PvuII CAGCTG 1 cut(s) 1730
RsaI GTAC 3 cut(s) 795, 1266, 1892
RsaNI GTAC 3 cut(s) 794, 1265, 1891
RseI CAYNNNNRTG 6 cut(s) 780, 924, 1233, 1386, 1839, 2007
SapI GCTCTTC 1 cut(s) 732
SaqAI TTAA 6 cut(s) 1509, 1622, 1626, 2061, 2085, 2223
SatI GCNGC 6 cut(s) 42, 45, 375, 667, 1258, 2106
Sau3AI GATC 6 cut(s) 119, 382, 463, 891, 1201, 1549
SchI GAGTC 2 cut(s) 82, 92
ScrFI CCNGG 3 cut(s) 316, 1111, 2007
SduI GDGCHC 2 cut(s) 777, 2070
SfaNI GCATC 9 cut(s) 280, 859, 1150, 1234, 1459, 1525, 1592, 1829, 2140
SfcI CTRYAG 2 cut(s) 346, 896
SfuI TTCGAA 1 cut(s) 1129
SgrAI CRCCGGYG 2 cut(s) 73, 211
SmiMI CAYNNNNRTG 6 cut(s) 780, 924, 1233, 1386, 1839, 2007
SmlI CTYRAG 2 cut(s) 609, 1213
SmoI CTYRAG 2 cut(s) 609, 1213
SphI GCATGC 1 cut(s) 1943
SseBI AGGCCT 2 cut(s) 314, 1410
SspI AATATT 2 cut(s) 1134, 1153
SspMI CTAG 4 cut(s) 438, 1406, 1925, 2159
StuI AGGCCT 2 cut(s) 314, 1410
StyD4I CCNGG 3 cut(s) 314, 1109, 2005
StyI CCWWGG 2 cut(s) 517, 1539
TaaI ACNGT 2 cut(s) 619, 1895
TaiI ACGT 2 cut(s) 799, 1789
TaqI TCGA 4 cut(s) 5, 1129, 1138, 1464
TauI GCSGC 3 cut(s) 44, 47, 669
TfiI GAWTC 6 cut(s) 287, 367, 596, 1441, 1857, 1872
Tru1I TTAA 6 cut(s) 1509, 1622, 1626, 2061, 2085, 2223
Tru9I TTAA 6 cut(s) 1509, 1622, 1626, 2061, 2085, 2223
TscAI CASTG 1 cut(s) 1528
TseFI GTSAC 3 cut(s) 95, 989, 1312
TseI GCWGC 3 cut(s) 374, 1257, 2105
Tsp45I GTSAC 3 cut(s) 95, 989, 1312
TspGWI ACGGA 5 cut(s) 57, 395, 1008, 1850, 2196
TspRI CASTG 1 cut(s) 1528
Tth111I GACNNNGTC 1 cut(s) 265
XagI CCTNNNNNAGG 1 cut(s) 458
XapI RAATTY 2 cut(s) 427, 1577
XceI RCATGY 1 cut(s) 1943
XmnI GAANNNNTTC 2 cut(s) 335, 564
XspI CTAG 4 cut(s) 438, 1406, 1925, 2159
Zsp2I ATGCAT 2 cut(s) 1822, 1846
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.