Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0017122

Physical Location & Seq

Genomic Coordinates Forward (+)

41485198 .. 41488763

Gene Structure 3566 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000025037

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2652 bp

ATGAAGTGTCTCTTCCTTGTTTTTCTTTGCTTTACTTCCGCAATCCATTTCATTCTTGCTGCCAATTACATCCCATCTGACAAAATCTTCCTAAGCTGCGGTGGTCCGCAGCAGTCCACCGATTCCGATGGCCAGAAATGGACATCGGATGTCGGCTCCAAGTTTGCCTCCGGCGCAAACTCCACCACTTCCCGTGCCGCCACTCAAGACCCTGCAGTCCCTGAGATTCCTTTCATGACTGCCAGGGTCTTTCATTCTGATTACACATATAAATTCCCGGTCGCCTCCGGCCGGATGTTTGTTCGTCTTTTCTTTTATCCGGCTTCCTACGCCGGACTCAATGCCTCCGATGCTGTCTTTTCTGTCATGGTTGAGTCCTATACTGTTCTCAAAAACTTCAGTGTTGTCCAGACCACTGAGGCTTTGGATTATGCTTATGTTACCAAGGAGTTTATTGTCAATGTTGAAGGAGAGTCTCTGGATGTCACTTTTAAGCCCTCTGGTGGTGTCTTGAATGCGTATGCCTTTGTGAATGGGATCGAGATTGTGTCCATGCCAGATATCTATAGTTCTACCGATGGTGCTATGATTGTGGGACAATCGACTCCTTACACTATTGATAATAGCACGGCACTGGAGAATGTTTATCGGTTGAATGTCGGTGGAAAAGATATATCGCCGAGTCAGGATACTGGTCTGCTTAGGTCTTGGTATGATGACACTCCTTATCTGTTTGGAGCAGCCTTTGGAGTTTCGGAGTTTGCTGATAACAATATGTCCATTGCTTACCCTAAGACCATGCCTACTTACGTTGCACCAGCTGATGTCTATTCCACAGCCAGGTCTATGGGGCCGAATAACAGCATCAATCTCAACTACAATTTGACTTGGATATTTTCGATTGATTCTGGATTTTCATACCTTGTGAGGCTACATTTCTGTGAGGTTGCTGCAGTCATAACCAAGCAGAATCAGAGAGTGTTTGATATCTATCTCAATAATCAAACCGCTGAGTCTGCGTTTGACGTTGCTGCATTTACAGGAGGGAATGGAATTCCGGCATACAGAGATTATGTGGTAATGGTTCCAAATGGGAGCCCGCAGGAGGATCTATGGCTTGCACTGCATCCAAATTCTTCTGATAAGCCACAGTACTACGATGCAATCCTAAATGGAGTCGAGATTTTCAAGATCAATGATACTACTGGCAATCTTGGAGGGCCTAATCCTATTCCCCGTCCCATGCAGGAGAACATTGATCCATCGAAGGCTAGACCTGGATCAGGTCATGGCAAGAGTAAGAGTGATAACCAGAAAGCGATTATTGCCGGGGGAGTTAGTGGTGGAATTGTCTTGGCCCTTGTCCTTGGTTTCTTTGCTATTTGCGTGTCACGCCGCCGTGGACAACCGAAGGACTCAAGTGCAAGCGAAGGGCCATCTGGTTGGCTCCCTCTGTCTTTGTATTCACAATCTGCAAGTTCTGCCAAGACAAACACAACACGAAGTTGTGCTTCCTCCCTCCCATCAAACCTCTGTCGTCACTTCTCATTTGCTGAGATCCAAGCAGCCACTAACAACTTTGAAGAGGCTCGACTCCTTGGGGTGGGAGGTTTTGGAAAAGTATACAAGGGTGACATTGACGGTGGAACAACCAAAGTAGCCATTAAGCGTGGAAACCCACTCTCTGATCAAGGTGTGCATGAATTTCAGACTGAGATTGAAATGCTCTCAAAGCTTCGTCATCGTCATCTTGTTTCACTGATTGGCTACTGTGAAGATAACTCTGAAATGATTCTTGTATACGATTACATGGCTTTTGGAACCCTGCGTGAGCATCTGTACAAGACCCAAAAGCCGCCACTCCCCTGGAAGCAAAGGCTTGAGATTTGCATTGGAGCTGCTCGTGGTTTACACTACCTTCATACTGGTGCCAAGCACACAATCATCCACAGAGATGTTAAGACAACTAACATTCTGTTAGATGAAAAGTGGGTTGCAAAGGTCTCAGACTTTGGCTTGTCCAAAACAGGTCCTACATTGGATAACACTCATGTCAGCACTGTTGTCAAAGGTAGCTTTGGGTATCTGGATCCGGAGTACTTTAGGCGGCAACAGCTGACTGACAAGTCTGATGTGTATTCGTTCGGAGTTGTCCTTTTTGAGATCTTATGTGCTCGCCCAGCCTTGAACCCCACGCTTCCAAAGGAGCAAGTGAGCTTAGCAGAGTGGGCTGCACATTGCCACAAGAAGGGCATGCTTGATCAGATCCTCGATCCTTATCTCAAGGGGAAGATCACACCTGAATGTTTCAGAAAGTTTGCAGAGACAGCAATGAAGTGTGTGTCAGACCAGAGCATTGACAGGCCATCAATGGGAGATGTTCTCTGGAACCTGGAGTTTGCATTGCAGCTACAGGAGAGTGCAGAAGAGACTGGCAGGGGTATTGGAATGGACATGGAGGAAGAGCCCTTCATGGCCTGTAAAGGGAAGAAGGACCTAGATGCATCAACAGGGTTCGATGGCAATGTGACAGACTCGAGGAGCAGTGGCATCAGCATGAGCATAGGTGGTCGCAGCCTGGCTAGTGACGATTCTGATGGACTGACACCAAGTGCTGTGTTCTCACAGATCATGAACCCAAAGGGACGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

884

Amino Acids

96.6

Weight (kDa)

5.72

Isoelectric Point (pI)

40.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin_like	PF12819	31 - 398	1.1e-35	Malectin-like domain
Malectin	PF11721	31 - 165	3.2e-09	Malectin domain
Malectin	PF11721	256 - 364	1.7e-10	Malectin domain
Pkinase	PF00069	527 - 791	5.7e-41	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	531 - 795	1e-48	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0017122)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51550
fragaria_vesca	FvH4_6g09590
malus_domestica	MD04G1176400.v1.1 MD12G1190700.v1.1
prunus_persica	Prupe.6G295900_v2.0.a1
pyrus_communis	pycom04g15560 pycom12g17790
rosa_chinensis	RchiOBHm_Chr3g0460181
rosa_laevigata	RLG00000025037
rosa_multiflora	Rmu_sc0003763.1_g000007
rosa_roxburghii	Rroxscaffold_6G00419760
rosa_rugosa	Rorug03G0040600
rosa_wichuraiana	Rw3G008320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	215, 2125
AccB1I	GGYRCC	1 cut(s)	1928
AccI	GTMKAC	2 cut(s)	1623, 1800
AccIII	TCCGGA	1 cut(s)	2092
AciI	CCGC	9 cut(s)	39, 99, 107, 198, 1008, 1100, 1396, 1856, 2107
AclWI	GGATC	9 cut(s)	545, 1116, 1253, 1288, 1552, 2084, 2097, 2260, 2267
AcoI	YGGCCR	2 cut(s)	130, 289
AcsI	RAATTY	4 cut(s)	272, 1053, 1132, 1703
AcuI	CTGAAG	1 cut(s)	382
AdeI	CACNNNGTG	1 cut(s)	2612
AfaI	GTAC	3 cut(s)	1154, 1841, 2099
AfiI	CCNNNNNNNGG	9 cut(s)	291, 503, 840, 1105, 1283, 1603, 2248, 2372, 2484
AgsI	TTSAA	7 cut(s)	467, 514, 655, 1189, 1583, 1721, 2188
AjnI	CCWGG	6 cut(s)	242, 839, 1276, 1865, 2391, 2577
AluBI	AGCT	8 cut(s)	96, 821, 1735, 1898, 2076, 2116, 2217, 2410
AluI	AGCT	8 cut(s)	96, 821, 1735, 1898, 2076, 2116, 2217, 2410
Alw21I	GWGCWC	1 cut(s)	2176
Alw26I	GTCTC	5 cut(s)	14, 480, 2008, 2318, 2423
AlwI	GGATC	9 cut(s)	545, 1116, 1253, 1288, 1552, 2084, 2097, 2260, 2267
AlwNI	CAGNNNCTG	1 cut(s)	221
Ama87I	CYCGRG	1 cut(s)	2536
Aor13HI	TCCGGA	1 cut(s)	2092
AoxI	GGCC	8 cut(s)	130, 289, 851, 1220, 1356, 1433, 2363, 2475
ApoI	RAATTY	4 cut(s)	272, 1053, 1132, 1703
Asp700I	GAANNNNTTC	1 cut(s)	1791
AspLEI	GCGC	1 cut(s)	176
AspS9I	GGNCC	7 cut(s)	104, 851, 1220, 1357, 1433, 2030, 2494
AsuC2I	CCSGG	2 cut(s)	278, 1330
AsuHPI	GGTGA	1 cut(s)	1643
AvaI	CYCGRG	1 cut(s)	2536
AvaII	GGWCC	3 cut(s)	104, 2030, 2494
BalI	TGGCCA	1 cut(s)	132
BamHI	GGATCC	1 cut(s)	2089
BanI	GGYRCC	1 cut(s)	1928
BanII	GRGCYC	2 cut(s)	1100, 2469
BauI	CACGAG	1 cut(s)	1902
Bbv12I	GWGCWC	1 cut(s)	2176
BccI	CCATC	9 cut(s)	82, 122, 572, 1270, 1444, 1531, 2374, 2513, 2591
BceAI	ACGGC	2 cut(s)	645, 1383
BciT130I	CCWGG	6 cut(s)	244, 841, 1278, 1867, 2393, 2579
BciVI	GTATCC	1 cut(s)	682
BclI	TGATCA	2 cut(s)	1687, 2260
BcnI	CCSGG	2 cut(s)	278, 1330
BcoDI	GTCTC	5 cut(s)	14, 480, 2008, 2318, 2423
BfaI	CTAG	3 cut(s)	1272, 2498, 2583
BfmI	CTRYAG	4 cut(s)	213, 565, 951, 2411
BfuI	GTATCC	1 cut(s)	682
BglII	AGATCT	1 cut(s)	2163
BlpI	GCTNAGC	1 cut(s)	2218
BmcAI	AGTACT	2 cut(s)	1154, 2099
Bme1390I	CCNGG	8 cut(s)	244, 278, 841, 1278, 1330, 1867, 2393, 2579
Bme18I	GGWCC	3 cut(s)	104, 2030, 2494
BmeT110I	CYCGRG	1 cut(s)	2536
BmgT120I	GGNCC	7 cut(s)	104, 851, 1220, 1357, 1433, 2030, 2494
BmiI	GGNNCC	9 cut(s)	157, 852, 1086, 1097, 1448, 1822, 1930, 2091, 2390
BmrFI	CCNGG	8 cut(s)	244, 278, 841, 1278, 1330, 1867, 2393, 2579
BmsI	GCATC	8 cut(s)	340, 873, 1135, 1150, 1843, 2491, 2513, 2559
BplI	GAGNNNNNCTC	2 cut(s)	2367, 2399
BpmI	CTGGAG	2 cut(s)	656, 2414
Bpu10I	CCTNAGC	2 cut(s)	92, 701
Bpu1102I	GCTNAGC	1 cut(s)	2218
BpuEI	CTTGAG	4 cut(s)	189, 1402, 1901, 2267
BpuMI	CCSGG	2 cut(s)	278, 1330
BsaBI	GATNNNNATC	2 cut(s)	990, 2277
BsaI	GGTCTC	1 cut(s)	2008
BsaJI	CCNNGG	7 cut(s)	243, 444, 1329, 1366, 1399, 1597, 1865
BsaWI	WCCGGW	1 cut(s)	2092
Bsc4I	CCNNNNNNNGG	9 cut(s)	291, 503, 840, 1105, 1283, 1603, 2248, 2372, 2484
Bse1I	ACTGG	5 cut(s)	639, 697, 1210, 1930, 2437
Bse3DI	GCAATG	5 cut(s)	780, 2236, 2337, 2402, 2530
Bse8I	GATNNNNATC	2 cut(s)	990, 2277
BseAI	TCCGGA	1 cut(s)	2092
BseBI	CCWGG	6 cut(s)	244, 841, 1278, 1867, 2393, 2579
BseDI	CCNNGG	7 cut(s)	243, 444, 1329, 1366, 1399, 1597, 1865
BseGI	GGATG	6 cut(s)	69, 154, 300, 487, 1126, 1944
BseJI	GATNNNNATC	2 cut(s)	990, 2277
BseLI	CCNNNNNNNGG	9 cut(s)	291, 503, 840, 1105, 1283, 1603, 2248, 2372, 2484
BseMI	GCAATG	5 cut(s)	780, 2236, 2337, 2402, 2530
BseMII	CTCAG	6 cut(s)	213, 408, 1002, 1545, 1704, 2019
BseNI	ACTGG	5 cut(s)	639, 697, 1210, 1930, 2437
BseRI	GAGGAG	1 cut(s)	2554
BseX3I	CGGCCG	1 cut(s)	289
BseYI	CCCAGC	1 cut(s)	2179
BsgI	GTGCAG	2 cut(s)	2217, 2442
Bsh1285I	CGRYCG	2 cut(s)	282, 292
BshFI	GGCC	8 cut(s)	132, 291, 853, 1222, 1358, 1435, 2365, 2477
BshNI	GGYRCC	1 cut(s)	1928
BsiEI	CGRYCG	2 cut(s)	282, 292
BsiHKAI	GWGCWC	1 cut(s)	2176
BsiHKCI	CYCGRG	1 cut(s)	2536
BsiSI	CCGG	9 cut(s)	171, 278, 288, 292, 320, 333, 1058, 1329, 2093
BslFI	GGGAC	3 cut(s)	203, 609, 1224
BslI	CCNNNNNNNGG	9 cut(s)	291, 503, 840, 1105, 1283, 1603, 2248, 2372, 2484
BsmAI	GTCTC	5 cut(s)	14, 480, 2008, 2318, 2423
BsmFI	GGGAC	3 cut(s)	203, 609, 1224
BsmI	GAATGC	1 cut(s)	520
BsnI	GGCC	8 cut(s)	132, 291, 853, 1222, 1358, 1435, 2365, 2477
Bso31I	GGTCTC	1 cut(s)	2008
BsoBI	CYCGRG	1 cut(s)	2536
Bsp1286I	GDGCHC	3 cut(s)	1100, 2176, 2469
Bsp13I	TCCGGA	1 cut(s)	2092
Bsp1407I	TGTACA	1 cut(s)	1839
Bsp1720I	GCTNAGC	1 cut(s)	2218
BspACI	CCGC	9 cut(s)	39, 99, 107, 198, 1008, 1100, 1396, 1856, 2107
BspANI	GGCC	8 cut(s)	132, 291, 853, 1222, 1358, 1435, 2365, 2477
BspCNI	CTCAG	6 cut(s)	214, 409, 1003, 1546, 1705, 2018
BspEI	TCCGGA	1 cut(s)	2092
BspHI	TCATGA	2 cut(s)	234, 2631
BspLI	GGNNCC	9 cut(s)	157, 852, 1086, 1097, 1448, 1822, 1930, 2091, 2390
BspMAI	CTGCAG	2 cut(s)	217, 955
BspPI	GGATC	9 cut(s)	545, 1116, 1253, 1288, 1552, 2084, 2097, 2260, 2267
BspQI	GCTCTTC	1 cut(s)	2457
BspT107I	GGYRCC	1 cut(s)	1928
BspTNI	GGTCTC	1 cut(s)	2008
BsrDI	GCAATG	5 cut(s)	780, 2236, 2337, 2402, 2530
BsrGI	TGTACA	1 cut(s)	1839
BsrI	ACTGG	5 cut(s)	639, 697, 1210, 1930, 2437
BssECI	CCNNGG	7 cut(s)	243, 444, 1329, 1366, 1399, 1597, 1865
BssNAI	GTATAC	2 cut(s)	1624, 1801
BssSI	CACGAG	1 cut(s)	1902
BssT1I	CCWWGG	3 cut(s)	444, 1366, 1597
Bst1107I	GTATAC	2 cut(s)	1624, 1801
Bst2BI	CACGAG	1 cut(s)	1902
Bst2UI	CCWGG	6 cut(s)	244, 841, 1278, 1867, 2393, 2579
Bst4CI	ACNGT	5 cut(s)	385, 1152, 1643, 1772, 2062
Bst6I	CTCTTC	4 cut(s)	17, 1578, 2421, 2457
BstAPI	GCANNNNNTGC	1 cut(s)	1481
BstAUI	TGTACA	1 cut(s)	1839
BstC8I	GCNNGC	5 cut(s)	1100, 1119, 1426, 2176, 2255
BstDSI	CCRYGG	1 cut(s)	1399
BstENI	CCTNNNNNAGG	1 cut(s)	1281
BstF5I	GGATG	6 cut(s)	69, 154, 300, 487, 1126, 1944
BstHHI	GCGC	1 cut(s)	176
BstMAI	GTCTC	5 cut(s)	14, 480, 2008, 2318, 2423
BstMCI	CGRYCG	2 cut(s)	282, 292
BstNI	CCWGG	6 cut(s)	244, 841, 1278, 1867, 2393, 2579
BstNSI	RCATGY	1 cut(s)	2257
BstSCI	CCNGG	8 cut(s)	242, 276, 839, 1276, 1328, 1865, 2391, 2577
BstSFI	CTRYAG	4 cut(s)	213, 565, 951, 2411
BstX2I	RGATCY	5 cut(s)	1108, 1557, 2089, 2163, 2265
BstXI	CCANNNNNNTGG	3 cut(s)	847, 1443, 1866
BstYI	RGATCY	5 cut(s)	1108, 1557, 2089, 2163, 2265
BstZ17I	GTATAC	2 cut(s)	1624, 1801
BstZI	CGGCCG	1 cut(s)	289
BsuI	GTATCC	1 cut(s)	682
BsuRI	GGCC	8 cut(s)	132, 291, 853, 1222, 1358, 1435, 2365, 2477
BtgI	CCRYGG	1 cut(s)	1399
BtsCI	GGATG	6 cut(s)	69, 154, 300, 487, 1126, 1944
BtsI	GCAGTG	2 cut(s)	1121, 2551
BtsIMutI	CAGTG	7 cut(s)	406, 414, 632, 1121, 1757, 2058, 2551
Cac8I	GCNNGC	5 cut(s)	1100, 1119, 1426, 2176, 2255
CaiI	CAGNNNCTG	1 cut(s)	221
CciI	TCATGA	2 cut(s)	234, 2631
CfoI	GCGC	1 cut(s)	176
Cfr13I	GGNCC	7 cut(s)	104, 851, 1220, 1357, 1433, 2030, 2494
Csp6I	GTAC	3 cut(s)	1153, 1840, 2098
CviQI	GTAC	3 cut(s)	1153, 1840, 2098
DraIII	CACNNNGTG	1 cut(s)	2612
DrdI	GACNNNNNNGTC	2 cut(s)	215, 2125
DseDI	GACNNNNNNGTC	2 cut(s)	215, 2125
EaeI	YGGCCR	2 cut(s)	130, 289
EagI	CGGCCG	1 cut(s)	289
Eam1104I	CTCTTC	4 cut(s)	17, 1578, 2421, 2457
EarI	CTCTTC	4 cut(s)	17, 1578, 2421, 2457
EclXI	CGGCCG	1 cut(s)	289
Eco130I	CCWWGG	3 cut(s)	444, 1366, 1597
Eco24I	GRGCYC	2 cut(s)	1100, 2469
Eco31I	GGTCTC	1 cut(s)	2008
Eco32I	GATATC	2 cut(s)	562, 988
Eco47I	GGWCC	3 cut(s)	104, 2030, 2494
Eco52I	CGGCCG	1 cut(s)	289
Eco57I	CTGAAG	1 cut(s)	382
Eco88I	CYCGRG	1 cut(s)	2536
EcoNI	CCTNNNNNAGG	1 cut(s)	1281
EcoO109I	RGGNCCY	3 cut(s)	1220, 2030, 2494
EcoRI	GAATTC	1 cut(s)	1053
EcoRII	CCWGG	6 cut(s)	242, 839, 1276, 1865, 2391, 2577
EcoRV	GATATC	2 cut(s)	562, 988
EcoT14I	CCWWGG	3 cut(s)	444, 1366, 1597
EcoT22I	ATGCAT	1 cut(s)	2506
EcoT38I	GRGCYC	2 cut(s)	1100, 2469
ErhI	CCWWGG	3 cut(s)	444, 1366, 1597
FalI	AAGNNNNNCTT	3 cut(s)	28, 1495, 1527
FaqI	GGGAC	3 cut(s)	203, 609, 1224
FauI	CCCGC	1 cut(s)	1107
FbaI	TGATCA	2 cut(s)	1687, 2260
FblI	GTMKAC	2 cut(s)	1623, 1800
FokI	GGATG	6 cut(s)	56, 161, 307, 494, 1113, 1931
FriOI	GRGCYC	2 cut(s)	1100, 2469
FspBI	CTAG	3 cut(s)	1272, 2498, 2583
GlaI	GCGC	1 cut(s)	175
GsaI	CCCAGC	1 cut(s)	2183
GsuI	CTGGAG	2 cut(s)	656, 2414
HaeIII	GGCC	8 cut(s)	132, 291, 853, 1222, 1358, 1435, 2365, 2477
HapII	CCGG	9 cut(s)	171, 278, 288, 292, 320, 333, 1058, 1329, 2093
HhaI	GCGC	1 cut(s)	176
Hin6I	GCGC	1 cut(s)	174
HinP1I	GCGC	1 cut(s)	174
HindIII	AAGCTT	1 cut(s)	1733
HpaII	CCGG	9 cut(s)	171, 278, 288, 292, 320, 333, 1058, 1329, 2093
HphI	GGTGA	1 cut(s)	1643
Hpy166II	GTNNAC	5 cut(s)	117, 1403, 1624, 1801, 1910
Hpy8I	GTNNAC	5 cut(s)	117, 1403, 1624, 1801, 1910
HpyAV	CCTTC	8 cut(s)	461, 1261, 1405, 1424, 1928, 2242, 2479, 2485
HpyCH4III	ACNGT	5 cut(s)	385, 1152, 1643, 1772, 2062
HpyCH4IV	ACGT	3 cut(s)	810, 1026, 2647
HpySE526I	ACGT	3 cut(s)	810, 1026, 2647
HspAI	GCGC	1 cut(s)	174
Kpn2I	TCCGGA	1 cut(s)	2092
Ksp22I	TGATCA	2 cut(s)	1687, 2260
LguI	GCTCTTC	1 cut(s)	2457
LmnI	GCTCC	7 cut(s)	161, 737, 1095, 1452, 1895, 2206, 2541
LweI	GCATC	8 cut(s)	340, 873, 1135, 1150, 1843, 2491, 2513, 2559
MaeI	CTAG	3 cut(s)	1272, 2498, 2583
MaeII	ACGT	3 cut(s)	810, 1026, 2647
MaeIII	GTNAC	7 cut(s)	439, 484, 1389, 1538, 1631, 2527, 2585
MboII	GAAGA	9 cut(s)	4, 79, 1128, 1595, 1787, 2302, 2438, 2474, 2500
MflI	RGATCY	5 cut(s)	1108, 1557, 2089, 2163, 2265
MhlI	GDGCHC	3 cut(s)	1100, 2176, 2469
MlsI	TGGCCA	1 cut(s)	132
MluCI	AATT	7 cut(s)	64, 272, 880, 1053, 1132, 1347, 1703
MluNI	TGGCCA	1 cut(s)	132
Mox20I	TGGCCA	1 cut(s)	132
Mph1103I	ATGCAT	1 cut(s)	2506
MroI	TCCGGA	1 cut(s)	2092
MroXI	GAANNNNTTC	1 cut(s)	1791
MscI	TGGCCA	1 cut(s)	132
MseI	TTAA	3 cut(s)	492, 1665, 1959
MslI	CAYNNNNRTG	5 cut(s)	939, 1926, 1953, 2302, 2555
Msp20I	TGGCCA	1 cut(s)	132
MspA1I	CMGCKG	3 cut(s)	821, 1010, 2116
MspI	CCGG	9 cut(s)	171, 278, 288, 292, 320, 333, 1058, 1329, 2093
MspR9I	CCNGG	8 cut(s)	244, 278, 841, 1278, 1330, 1867, 2393, 2579
Mva1269I	GAATGC	1 cut(s)	520
MvaI	CCWGG	6 cut(s)	244, 841, 1278, 1867, 2393, 2579
NciI	CCSGG	2 cut(s)	278, 1330
NlaIV	GGNNCC	9 cut(s)	157, 852, 1086, 1097, 1448, 1822, 1930, 2091, 2390
NmeAIII	GCCGAG	1 cut(s)	705
NmuCI	GTSAC	6 cut(s)	484, 1389, 1538, 1631, 2527, 2585
NsiI	ATGCAT	1 cut(s)	2506
NspI	RCATGY	1 cut(s)	2257
PaeI	GCATGC	1 cut(s)	2257
PaeR7I	CTCGAG	1 cut(s)	2536
PagI	TCATGA	2 cut(s)	234, 2631
PciSI	GCTCTTC	1 cut(s)	2457
PctI	GAATGC	1 cut(s)	520
PdmI	GAANNNNTTC	1 cut(s)	1791
PfeI	GAWTC	6 cut(s)	122, 226, 905, 970, 1792, 2591
PpuMI	RGGWCCY	2 cut(s)	2030, 2494
Psp5II	RGGWCCY	2 cut(s)	2030, 2494
Psp6I	CCWGG	6 cut(s)	242, 839, 1276, 1865, 2391, 2577
PspFI	CCCAGC	1 cut(s)	2179
PspGI	CCWGG	6 cut(s)	242, 839, 1276, 1865, 2391, 2577
PspN4I	GGNNCC	9 cut(s)	157, 852, 1086, 1097, 1448, 1822, 1930, 2091, 2390
PspPI	GGNCC	7 cut(s)	104, 851, 1220, 1357, 1433, 2030, 2494
PspPPI	RGGWCCY	2 cut(s)	2030, 2494
PspXI	VCTCGAGB	1 cut(s)	2536
PstI	CTGCAG	2 cut(s)	217, 955
PstNI	CAGNNNCTG	1 cut(s)	221
PsuI	RGATCY	5 cut(s)	1108, 1557, 2089, 2163, 2265
PvuII	CAGCTG	2 cut(s)	821, 2116
RsaI	GTAC	3 cut(s)	1154, 1841, 2099
RsaNI	GTAC	3 cut(s)	1153, 1840, 2098
RseI	CAYNNNNRTG	5 cut(s)	939, 1926, 1953, 2302, 2555
SapI	GCTCTTC	1 cut(s)	2457
SaqAI	TTAA	3 cut(s)	492, 1665, 1959
Sau96I	GGNCC	7 cut(s)	104, 851, 1220, 1357, 1433, 2030, 2494
ScaI	AGTACT	2 cut(s)	1154, 2099
ScrFI	CCNGG	8 cut(s)	244, 278, 841, 1278, 1330, 1867, 2393, 2579
SduI	GDGCHC	3 cut(s)	1100, 2176, 2469
SfaNI	GCATC	8 cut(s)	340, 873, 1135, 1150, 1843, 2491, 2513, 2559
SfcI	CTRYAG	4 cut(s)	213, 565, 951, 2411
Sfr274I	CTCGAG	1 cut(s)	2536
SinI	GGWCC	3 cut(s)	104, 2030, 2494
SlaI	CTCGAG	1 cut(s)	2536
SmiMI	CAYNNNNRTG	5 cut(s)	939, 1926, 1953, 2302, 2555
SmlI	CTYRAG	5 cut(s)	204, 1417, 1880, 2282, 2536
SmoI	CTYRAG	5 cut(s)	204, 1417, 1880, 2282, 2536
SphI	GCATGC	1 cut(s)	2257
Sse9I	AATT	7 cut(s)	64, 272, 880, 1053, 1132, 1347, 1703
SsiI	CCGC	9 cut(s)	39, 99, 107, 198, 1008, 1100, 1396, 1856, 2107
SspMI	CTAG	3 cut(s)	1272, 2498, 2583
StyD4I	CCNGG	8 cut(s)	242, 276, 839, 1276, 1328, 1865, 2391, 2577
StyI	CCWWGG	3 cut(s)	444, 1366, 1597
TaaI	ACNGT	5 cut(s)	385, 1152, 1643, 1772, 2062
TaiI	ACGT	3 cut(s)	813, 1029, 2650
TaqI	TCGA	9 cut(s)	540, 602, 899, 1179, 1265, 1591, 2271, 2517, 2537
TasI	AATT	7 cut(s)	64, 272, 880, 1053, 1132, 1347, 1703
TatI	WGTACW	3 cut(s)	1152, 1839, 2097
TauI	GCSGC	4 cut(s)	200, 1398, 1858, 2110
TfiI	GAWTC	6 cut(s)	122, 226, 905, 970, 1792, 2591
Tru1I	TTAA	3 cut(s)	492, 1665, 1959
Tru9I	TTAA	3 cut(s)	492, 1665, 1959
TscAI	CASTG	7 cut(s)	406, 421, 639, 1128, 1764, 2065, 2551
TseFI	GTSAC	6 cut(s)	484, 1389, 1538, 1631, 2527, 2585
Tsp45I	GTSAC	6 cut(s)	484, 1389, 1538, 1631, 2527, 2585
TspRI	CASTG	7 cut(s)	406, 421, 639, 1128, 1764, 2065, 2551
VpaK11BI	GGWCC	3 cut(s)	104, 2030, 2494
XagI	CCTNNNNNAGG	1 cut(s)	1281
XapI	RAATTY	4 cut(s)	272, 1053, 1132, 1703
XceI	RCATGY	1 cut(s)	2257
XcmI	CCANNNNNNNNNTGG	1 cut(s)	421
XhoI	CTCGAG	1 cut(s)	2536
XmiI	GTMKAC	2 cut(s)	1623, 1800
XmnI	GAANNNNTTC	1 cut(s)	1791
XspI	CTAG	3 cut(s)	1272, 2498, 2583
ZrmI	AGTACT	2 cut(s)	1154, 2099
Zsp2I	ATGCAT	1 cut(s)	2506

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.