Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0017122

Physical Location & Seq

Genomic Coordinates Reverse (-)

7709082 .. 7711731

Gene Structure 2650 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G008320.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2583 bp

ATGAAGTGTCTCTTGTTTGTTTTTCTTTGCTTTACTTCCGCAATCCATTTCATTCTCGCTGCCAATTACATCCCATCTGAAAAAATCTTGCTAAACTGCGGCGGTCCGCCGGAGTCCACCGATCCCGATGTTGCCTCCGGCCCAAACTCCACCACTTCCCCTGCTGCAACTCAAGACCCTTCAGTCCCTCAAATTCCTTTCATGACTGCCAGGGTCTTTCATTCTGATTACACTTACAAATTTCCGGTCGCCTCCGGCCGGATGTTTGTTCGTCTTTTCTTTTATCCGGCTTCCTACGCCGGACTCAATGCCTCCGGTGCTGTCTTTTCTGTCATGGTCGAGTCCTATACTGCTTTGGATTATGCTTATGTTACCAAGGAGTTTATTGTCAATGTTGAAGGAGAGTCTCTGGATGTCACTTTTAAGCCCTCTGGTAGTGGCTTGAATGCGTATGCCTTTGTGAATGGGATCGAGATTGTGTCCATGCCCGATATCTATAGTTCTACCGATGGTGCTATGATTGTGGGACAATCGACTTCTTACACCATTGATAATAGCACGGCACTGGAGAATGTTTATCGGTTGAATGTGGGTGGAAAAGATATATCGCCGAGTCAGGATACTGGTCTGCTTAGGTCTTGGTATGATGACACTCCTTATCTGTTTGGAGCAGCCTTTGGAGTTCCGGAGTTTGCTGATAACAATATGTCCATTGCTTACCCTAAGACCATGCCTACTTACGTTGCACCAGCTGATGTCTATTCCACAGCCAGGTCTATGGGGCCGAATAACAACATCAACCTCAACTACAATTTGACTTGGGTGTTTTCGATTGATTCCGGATTTTCATACCTTGTGAGGCTACATTTCTGTGAGGTTGCTGCAAACATAACCAAGCAGAACCAGAGAGTGTTTGATATCTTTCTCAATAATCAAACCGCCGAGCCTGCGTTTGATGTTGCTGCATTTACAGGAGGGAATGGAATTCCGGTATACAGAGATTATGTGGTACTAGTTCCAAATGGGAGCCCGCAGGAGGATCTATGGCTTGCACTGCATCCAGAGCCTACTGAAAAACCACAATGGTATGATGCAATCCTAAATGGAGTTGAGATCTTCAAGATCAATGATACTACTGGCAATCTTGGAGGGCCTAATCCTATTCCCCGTCCCATGCAGGAGAACATTGATCCATCTAAGGTTAGAACTGGATCAGGTCATGGCAAGAGTAAGAGTAATAACCAGAAAGCGATTATTGCCGGGGGAGTTAGTGGTGGAATTGTCTTGGCCCTTGTCCTTGGTTTCTTTGCTATTTGCGTGTCACGCCGCCGTAGACAACCGAAGGACTCAAGTGCAAGTGAAGGGCCATCTGGTTGGCTCCCTCTGTCTTTGTATTCACAATCTGCAAGTTCTGCCAAGACAAACACAACACGAAGTTGTGCTTCCTCCCTCCCATCAAACCTCTGTCGTCACTTCTCATTTGCTGAGATCAAAGCAGCCACTAACAACTTTGAAGAGGCTCGACTCCTTGGGGTGGGAGGTTTTGGAAAAGTATACAAGGGTGACATTGATGGTGGAACAACCAAAGTAGCCATTAAGCGTGGAAACCCACTCTCTGATCAAGGTGTGCATGAATTTCAGACTGAGATTGAAATGCTCTCAAAGCTTCGTCATCGTCATCTTGTTTCACTGATTGGCTACTGTGAAGATAACTCTGAAATGATTCTTGTATACGATTACATGGCTTTTGGAACCCTGCGTGAGCATCTGTACAAGACCCAAAAGCCGCCACTCCCCTGGAAGCAAAGGCTTGAGATTTGCATTGGAGCTGCTCGTGGTTTACACTACCTTCATACTGGTGCCAAGCACACAATCATCCACAGAGATGTTAAGACAACTAACATTCTGTTAGATGAAAAGTGGGTTGCAAAGGTCTCAGACTTCGGCTTGTCCAAAACAGGTCCTACATTGGATAACACTCATGTCAGCACTGTTGTCAAAGGTAGCTTTGGGTATCTGGATCCGGAGTACTTTAGGCGGCAACAGCTGACTGATAAGTCTGACGTGTATTCGTTCGGAGTTGTCCTTTTTGAGATCTTATGTGCTCGCCCAGCCTTGAACCCCACGCTTCCAAAGGAGCAAGTGAGCTTAGCAGAGTGGGCTGCACATTGCCACAAGAAAGGCATGCTTGATCAGATCCTAGATCCTTATCTCAAGGGGAAGATCACACCTGAATGTTTCAGAAAGTTTGCAGAGACAGCAATGAAGTGTGTGTCAGACCAGAGCATTGACAGGCCATCAATGGGAGATGTTCTCTGGAACCTGGAGTTTGCATTGCAGCTACAGGAGAGTGCAGAAGAGACTGGCAAGGGTATTGGAATGGACATGGAGGAAGAGCCCTTCATGGCCTGTAAAGGGAAGAAGGACCTGGATGCATCACCAGGGTTCGATGGCAATGTGACAGACTCGAGGAGCAGTGGCATCAGCATGAGCATAGGTGGTCGCAGCCTGGCTAGTGACGATTCTGATGGACTGACACCAAGTGCTGTGTTCTCACAGATCATGAACCCAAAGGGACGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

860

Amino Acids

94.14

Weight (kDa)

5.79

Isoelectric Point (pI)

44.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin_like	PF12819	56 - 375	1.8e-30	Malectin-like domain
Malectin	PF11721	240 - 336	6.9e-10	Malectin domain
Pkinase	PF00069	504 - 768	5.4e-41	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	508 - 772	9.5e-49	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0017122)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51550
fragaria_vesca	FvH4_6g09590
malus_domestica	MD04G1176400.v1.1 MD12G1190700.v1.1
prunus_persica	Prupe.6G295900_v2.0.a1
pyrus_communis	pycom04g15560 pycom12g17790
rosa_chinensis	RchiOBHm_Chr3g0460181
rosa_laevigata	RLG00000025037
rosa_multiflora	Rmu_sc0003763.1_g000007
rosa_roxburghii	Rroxscaffold_6G00419760
rosa_rugosa	Rorug03G0040600
rosa_wichuraiana	Rw3G008320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	182, 2056
AccB1I	GGYRCC	1 cut(s)	1859
AccI	GTMKAC	4 cut(s)	993, 1333, 1554, 1731
AccIII	TCCGGA	3 cut(s)	685, 839, 2023
AciI	CCGC	9 cut(s)	39, 99, 102, 107, 939, 1031, 1327, 1787, 2038
AclWI	GGATC	9 cut(s)	116, 476, 1047, 1184, 1219, 2015, 2028, 2191, 2198
AcoI	YGGCCR	1 cut(s)	256
AcsI	RAATTY	4 cut(s)	192, 239, 984, 1634
AcuI	CTGAAG	1 cut(s)	165
AdeI	CACNNNGTG	1 cut(s)	2543
AfaI	GTAC	3 cut(s)	1011, 1772, 2030
AfiI	CCNNNNNNNGG	6 cut(s)	258, 771, 1036, 1534, 2303, 2415
AflIII	ACRYGT	1 cut(s)	2064
AgsI	TTSAA	7 cut(s)	398, 445, 586, 1120, 1514, 1652, 2119
AhlI	ACTAGT	1 cut(s)	1012
AjiI	CACGTC	1 cut(s)	2065
AjnI	CCWGG	7 cut(s)	209, 770, 1796, 2322, 2427, 2440, 2508
AluBI	AGCT	7 cut(s)	752, 1666, 1829, 2007, 2047, 2148, 2341
AluI	AGCT	7 cut(s)	752, 1666, 1829, 2007, 2047, 2148, 2341
Alw21I	GWGCWC	1 cut(s)	2107
Alw26I	GTCTC	5 cut(s)	14, 411, 1939, 2249, 2354
AlwI	GGATC	9 cut(s)	116, 476, 1047, 1184, 1219, 2015, 2028, 2191, 2198
Ama87I	CYCGRG	1 cut(s)	2467
Aor13HI	TCCGGA	3 cut(s)	685, 839, 2023
AoxI	GGCC	8 cut(s)	139, 256, 782, 1151, 1287, 1364, 2294, 2406
ApoI	RAATTY	4 cut(s)	192, 239, 984, 1634
ArsI	GACNNNNNNTTYG	2 cut(s)	231, 263
Asp700I	GAANNNNTTC	1 cut(s)	1722
AspS9I	GGNCC	8 cut(s)	104, 140, 782, 1151, 1288, 1364, 1961, 2425
AsuC2I	CCSGG	1 cut(s)	1261
AsuHPI	GGTGA	2 cut(s)	1574, 2430
AvaI	CYCGRG	1 cut(s)	2467
AvaII	GGWCC	3 cut(s)	104, 1961, 2425
BamHI	GGATCC	1 cut(s)	2020
BanI	GGYRCC	1 cut(s)	1859
BanII	GRGCYC	2 cut(s)	1031, 2400
BauI	CACGAG	1 cut(s)	1833
Bbv12I	GWGCWC	1 cut(s)	2107
BccI	CCATC	9 cut(s)	82, 503, 1201, 1375, 1462, 1565, 2305, 2444, 2522
BceAI	ACGGC	2 cut(s)	576, 1314
BciT130I	CCWGG	7 cut(s)	211, 772, 1798, 2324, 2429, 2442, 2510
BciVI	GTATCC	1 cut(s)	613
BclI	TGATCA	2 cut(s)	1618, 2191
BcnI	CCSGG	1 cut(s)	1261
BcoDI	GTCTC	5 cut(s)	14, 411, 1939, 2249, 2354
BcuI	ACTAGT	1 cut(s)	1012
BfaI	CTAG	3 cut(s)	1013, 2201, 2514
BfmI	CTRYAG	2 cut(s)	496, 2342
BfuI	GTATCC	1 cut(s)	613
BglII	AGATCT	2 cut(s)	1113, 2094
BlpI	GCTNAGC	1 cut(s)	2149
BmcAI	AGTACT	1 cut(s)	2030
Bme1390I	CCNGG	8 cut(s)	211, 772, 1261, 1798, 2324, 2429, 2442, 2510
Bme18I	GGWCC	3 cut(s)	104, 1961, 2425
BmeT110I	CYCGRG	1 cut(s)	2467
BmgBI	CACGTC	1 cut(s)	2065
BmgT120I	GGNCC	8 cut(s)	104, 140, 782, 1151, 1288, 1364, 1961, 2425
BmiI	GGNNCC	7 cut(s)	783, 1028, 1379, 1753, 1861, 2022, 2321
BmrFI	CCNGG	8 cut(s)	211, 772, 1261, 1798, 2324, 2429, 2442, 2510
BmsI	GCATC	6 cut(s)	1066, 1081, 1774, 2422, 2444, 2490
BplI	GAGNNNNNCTC	2 cut(s)	2298, 2330
BpmI	CTGGAG	2 cut(s)	587, 2345
Bpu10I	CCTNAGC	1 cut(s)	632
Bpu1102I	GCTNAGC	1 cut(s)	2149
BpuEI	CTTGAG	4 cut(s)	156, 1333, 1832, 2198
BpuMI	CCSGG	1 cut(s)	1261
BsaBI	GATNNNNATC	1 cut(s)	2208
BsaI	GGTCTC	1 cut(s)	1939
BsaJI	CCNNGG	7 cut(s)	210, 375, 1260, 1297, 1528, 1796, 2441
BsaWI	WCCGGW	6 cut(s)	244, 314, 685, 839, 988, 2023
Bsc4I	CCNNNNNNNGG	6 cut(s)	258, 771, 1036, 1534, 2303, 2415
Bse1I	ACTGG	6 cut(s)	570, 628, 1141, 1213, 1861, 2368
Bse3DI	GCAATG	5 cut(s)	711, 2167, 2268, 2333, 2461
Bse8I	GATNNNNATC	1 cut(s)	2208
BseAI	TCCGGA	3 cut(s)	685, 839, 2023
BseBI	CCWGG	7 cut(s)	211, 772, 1798, 2324, 2429, 2442, 2510
BseDI	CCNNGG	7 cut(s)	210, 375, 1260, 1297, 1528, 1796, 2441
BseGI	GGATG	6 cut(s)	69, 267, 418, 1057, 1875, 2437
BseJI	GATNNNNATC	1 cut(s)	2208
BseLI	CCNNNNNNNGG	6 cut(s)	258, 771, 1036, 1534, 2303, 2415
BseMI	GCAATG	5 cut(s)	711, 2167, 2268, 2333, 2461
BseMII	CTCAG	3 cut(s)	1476, 1635, 1950
BseNI	ACTGG	6 cut(s)	570, 628, 1141, 1213, 1861, 2368
BseRI	GAGGAG	1 cut(s)	2485
BseX3I	CGGCCG	1 cut(s)	256
BseYI	CCCAGC	1 cut(s)	2110
BsgI	GTGCAG	2 cut(s)	2148, 2373
Bsh1285I	CGRYCG	2 cut(s)	249, 259
BshFI	GGCC	8 cut(s)	141, 258, 784, 1153, 1289, 1366, 2296, 2408
BshNI	GGYRCC	1 cut(s)	1859
BsiEI	CGRYCG	2 cut(s)	249, 259
BsiHKAI	GWGCWC	1 cut(s)	2107
BsiHKCI	CYCGRG	1 cut(s)	2467
BslFI	GGGAC	3 cut(s)	170, 540, 1155
BslI	CCNNNNNNNGG	6 cut(s)	258, 771, 1036, 1534, 2303, 2415
BsmAI	GTCTC	5 cut(s)	14, 411, 1939, 2249, 2354
BsmFI	GGGAC	3 cut(s)	170, 540, 1155
BsmI	GAATGC	1 cut(s)	451
BsnI	GGCC	8 cut(s)	141, 258, 784, 1153, 1289, 1366, 2296, 2408
Bso31I	GGTCTC	1 cut(s)	1939
BsoBI	CYCGRG	1 cut(s)	2467
Bsp1286I	GDGCHC	3 cut(s)	1031, 2107, 2400
Bsp13I	TCCGGA	3 cut(s)	685, 839, 2023
Bsp1407I	TGTACA	1 cut(s)	1770
Bsp1720I	GCTNAGC	1 cut(s)	2149
BspACI	CCGC	9 cut(s)	39, 99, 102, 107, 939, 1031, 1327, 1787, 2038
BspANI	GGCC	8 cut(s)	141, 258, 784, 1153, 1289, 1366, 2296, 2408
BspCNI	CTCAG	3 cut(s)	1477, 1636, 1949
BspEI	TCCGGA	3 cut(s)	685, 839, 2023
BspHI	TCATGA	2 cut(s)	201, 2562
BspLI	GGNNCC	7 cut(s)	783, 1028, 1379, 1753, 1861, 2022, 2321
BspPI	GGATC	9 cut(s)	116, 476, 1047, 1184, 1219, 2015, 2028, 2191, 2198
BspQI	GCTCTTC	1 cut(s)	2388
BspT107I	GGYRCC	1 cut(s)	1859
BspTNI	GGTCTC	1 cut(s)	1939
BsrDI	GCAATG	5 cut(s)	711, 2167, 2268, 2333, 2461
BsrGI	TGTACA	1 cut(s)	1770
BsrI	ACTGG	6 cut(s)	570, 628, 1141, 1213, 1861, 2368
BssECI	CCNNGG	7 cut(s)	210, 375, 1260, 1297, 1528, 1796, 2441
BssNAI	GTATAC	3 cut(s)	994, 1555, 1732
BssSI	CACGAG	1 cut(s)	1833
BssT1I	CCWWGG	3 cut(s)	375, 1297, 1528
Bst1107I	GTATAC	3 cut(s)	994, 1555, 1732
Bst2BI	CACGAG	1 cut(s)	1833
Bst2UI	CCWGG	7 cut(s)	211, 772, 1798, 2324, 2429, 2442, 2510
Bst4CI	ACNGT	2 cut(s)	1703, 1993
Bst6I	CTCTTC	3 cut(s)	1509, 2352, 2388
BstAPI	GCANNNNNTGC	1 cut(s)	1412
BstAUI	TGTACA	1 cut(s)	1770
BstC8I	GCNNGC	5 cut(s)	948, 1031, 1050, 2107, 2186
BstDEI	CTNAG	7 cut(s)	632, 723, 1197, 1485, 1644, 1936, 2149
BstF5I	GGATG	6 cut(s)	69, 267, 418, 1057, 1875, 2437
BstMAI	GTCTC	5 cut(s)	14, 411, 1939, 2249, 2354
BstMCI	CGRYCG	2 cut(s)	249, 259
BstNI	CCWGG	7 cut(s)	211, 772, 1798, 2324, 2429, 2442, 2510
BstNSI	RCATGY	1 cut(s)	2188
BstSCI	CCNGG	8 cut(s)	209, 770, 1259, 1796, 2322, 2427, 2440, 2508
BstSFI	CTRYAG	2 cut(s)	496, 2342
BstX2I	RGATCY	6 cut(s)	1039, 1113, 2020, 2094, 2196, 2203
BstXI	CCANNNNNNTGG	3 cut(s)	778, 1374, 1797
BstYI	RGATCY	6 cut(s)	1039, 1113, 2020, 2094, 2196, 2203
BstZ17I	GTATAC	3 cut(s)	994, 1555, 1732
BstZI	CGGCCG	1 cut(s)	256
BsuI	GTATCC	1 cut(s)	613
BsuRI	GGCC	8 cut(s)	141, 258, 784, 1153, 1289, 1366, 2296, 2408
BtrI	CACGTC	1 cut(s)	2065
BtsCI	GGATG	6 cut(s)	69, 267, 418, 1057, 1875, 2437
BtsI	GCAGTG	2 cut(s)	1052, 2482
BtsIMutI	CAGTG	5 cut(s)	563, 1052, 1688, 1989, 2482
Cac8I	GCNNGC	5 cut(s)	948, 1031, 1050, 2107, 2186
CciI	TCATGA	2 cut(s)	201, 2562
Cfr13I	GGNCC	8 cut(s)	104, 140, 782, 1151, 1288, 1364, 1961, 2425
CpoI	CGGWCCG	1 cut(s)	104
Csp6I	GTAC	3 cut(s)	1010, 1771, 2029
CspI	CGGWCCG	1 cut(s)	104
CviQI	GTAC	3 cut(s)	1010, 1771, 2029
DdeI	CTNAG	7 cut(s)	632, 723, 1197, 1485, 1644, 1936, 2149
DraIII	CACNNNGTG	1 cut(s)	2543
DrdI	GACNNNNNNGTC	2 cut(s)	182, 2056
DseDI	GACNNNNNNGTC	2 cut(s)	182, 2056
EaeI	YGGCCR	1 cut(s)	256
EagI	CGGCCG	1 cut(s)	256
Eam1104I	CTCTTC	3 cut(s)	1509, 2352, 2388
EarI	CTCTTC	3 cut(s)	1509, 2352, 2388
EciI	GGCGGA	1 cut(s)	96
EclXI	CGGCCG	1 cut(s)	256
Eco130I	CCWWGG	3 cut(s)	375, 1297, 1528
Eco24I	GRGCYC	2 cut(s)	1031, 2400
Eco31I	GGTCTC	1 cut(s)	1939
Eco32I	GATATC	2 cut(s)	493, 919
Eco47I	GGWCC	3 cut(s)	104, 1961, 2425
Eco52I	CGGCCG	1 cut(s)	256
Eco57I	CTGAAG	1 cut(s)	165
Eco88I	CYCGRG	1 cut(s)	2467
EcoO109I	RGGNCCY	3 cut(s)	1151, 1961, 2425
EcoRI	GAATTC	1 cut(s)	984
EcoRII	CCWGG	7 cut(s)	209, 770, 1796, 2322, 2427, 2440, 2508
EcoRV	GATATC	2 cut(s)	493, 919
EcoT14I	CCWWGG	3 cut(s)	375, 1297, 1528
EcoT22I	ATGCAT	1 cut(s)	2437
EcoT38I	GRGCYC	2 cut(s)	1031, 2400
ErhI	CCWWGG	3 cut(s)	375, 1297, 1528
FalI	AAGNNNNNCTT	5 cut(s)	28, 1426, 1458, 2172, 2204
FaqI	GGGAC	3 cut(s)	170, 540, 1155
FauI	CCCGC	1 cut(s)	1038
FbaI	TGATCA	2 cut(s)	1618, 2191
FblI	GTMKAC	4 cut(s)	993, 1333, 1554, 1731
FokI	GGATG	6 cut(s)	56, 274, 425, 1044, 1862, 2444
FriOI	GRGCYC	2 cut(s)	1031, 2400
FspBI	CTAG	3 cut(s)	1013, 2201, 2514
GsaI	CCCAGC	1 cut(s)	2114
GsuI	CTGGAG	2 cut(s)	587, 2345
HaeIII	GGCC	8 cut(s)	141, 258, 784, 1153, 1289, 1366, 2296, 2408
HindIII	AAGCTT	1 cut(s)	1664
HphI	GGTGA	2 cut(s)	1574, 2430
Hpy166II	GTNNAC	6 cut(s)	117, 994, 1334, 1555, 1732, 1841
Hpy8I	GTNNAC	6 cut(s)	117, 994, 1334, 1555, 1732, 1841
HpyAV	CCTTC	7 cut(s)	189, 392, 1336, 1355, 1859, 2410, 2416
HpyCH4III	ACNGT	2 cut(s)	1703, 1993
HpyCH4IV	ACGT	3 cut(s)	741, 2064, 2578
HpyF3I	CTNAG	7 cut(s)	632, 723, 1197, 1485, 1644, 1936, 2149
HpySE526I	ACGT	3 cut(s)	741, 2064, 2578
Kpn2I	TCCGGA	3 cut(s)	685, 839, 2023
Ksp22I	TGATCA	2 cut(s)	1618, 2191
LguI	GCTCTTC	1 cut(s)	2388
LmnI	GCTCC	6 cut(s)	668, 1026, 1383, 1826, 2137, 2472
LweI	GCATC	6 cut(s)	1066, 1081, 1774, 2422, 2444, 2490
MaeI	CTAG	3 cut(s)	1013, 2201, 2514
MaeII	ACGT	3 cut(s)	741, 2064, 2578
MaeIII	GTNAC	7 cut(s)	370, 415, 1320, 1469, 1562, 2458, 2516
MboII	GAAGA	7 cut(s)	1108, 1526, 1718, 2233, 2369, 2405, 2431
MflI	RGATCY	6 cut(s)	1039, 1113, 2020, 2094, 2196, 2203
MhlI	GDGCHC	3 cut(s)	1031, 2107, 2400
MluCI	AATT	7 cut(s)	64, 192, 239, 811, 984, 1278, 1634
MlyI	GAGTC	8 cut(s)	122, 297, 350, 413, 622, 1340, 1518, 2459
Mph1103I	ATGCAT	1 cut(s)	2437
MroI	TCCGGA	3 cut(s)	685, 839, 2023
MroXI	GAANNNNTTC	1 cut(s)	1722
MseI	TTAA	3 cut(s)	423, 1596, 1890
MslI	CAYNNNNRTG	5 cut(s)	870, 1857, 1884, 2233, 2486
MspA1I	CMGCKG	2 cut(s)	752, 2047
MspR9I	CCNGG	8 cut(s)	211, 772, 1261, 1798, 2324, 2429, 2442, 2510
Mva1269I	GAATGC	1 cut(s)	451
MvaI	CCWGG	7 cut(s)	211, 772, 1798, 2324, 2429, 2442, 2510
NciI	CCSGG	1 cut(s)	1261
NlaIV	GGNNCC	7 cut(s)	783, 1028, 1379, 1753, 1861, 2022, 2321
NmeAIII	GCCGAG	2 cut(s)	636, 967
NmuCI	GTSAC	6 cut(s)	415, 1320, 1469, 1562, 2458, 2516
NsiI	ATGCAT	1 cut(s)	2437
NspI	RCATGY	1 cut(s)	2188
PaeI	GCATGC	1 cut(s)	2188
PaeR7I	CTCGAG	1 cut(s)	2467
PagI	TCATGA	2 cut(s)	201, 2562
PciSI	GCTCTTC	1 cut(s)	2388
PctI	GAATGC	1 cut(s)	451
PdmI	GAANNNNTTC	1 cut(s)	1722
PfeI	GAWTC	3 cut(s)	836, 1723, 2522
PleI	GAGTC	8 cut(s)	121, 297, 349, 412, 621, 1340, 1518, 2459
PpsI	GAGTC	8 cut(s)	121, 297, 349, 412, 621, 1340, 1518, 2459
PpuMI	RGGWCCY	2 cut(s)	1961, 2425
Psp5II	RGGWCCY	2 cut(s)	1961, 2425
Psp6I	CCWGG	7 cut(s)	209, 770, 1796, 2322, 2427, 2440, 2508
PspFI	CCCAGC	1 cut(s)	2110
PspGI	CCWGG	7 cut(s)	209, 770, 1796, 2322, 2427, 2440, 2508
PspN4I	GGNNCC	7 cut(s)	783, 1028, 1379, 1753, 1861, 2022, 2321
PspPI	GGNCC	8 cut(s)	104, 140, 782, 1151, 1288, 1364, 1961, 2425
PspPPI	RGGWCCY	2 cut(s)	1961, 2425
PspXI	VCTCGAGB	1 cut(s)	2467
PsuI	RGATCY	6 cut(s)	1039, 1113, 2020, 2094, 2196, 2203
PvuII	CAGCTG	2 cut(s)	752, 2047
RsaI	GTAC	3 cut(s)	1011, 1772, 2030
RsaNI	GTAC	3 cut(s)	1010, 1771, 2029
RseI	CAYNNNNRTG	5 cut(s)	870, 1857, 1884, 2233, 2486
Rsr2I	CGGWCCG	1 cut(s)	104
RsrII	CGGWCCG	1 cut(s)	104
SapI	GCTCTTC	1 cut(s)	2388
SaqAI	TTAA	3 cut(s)	423, 1596, 1890
Sau96I	GGNCC	8 cut(s)	104, 140, 782, 1151, 1288, 1364, 1961, 2425
ScaI	AGTACT	1 cut(s)	2030
SchI	GAGTC	8 cut(s)	122, 297, 350, 413, 622, 1340, 1518, 2459
ScrFI	CCNGG	8 cut(s)	211, 772, 1261, 1798, 2324, 2429, 2442, 2510
SduI	GDGCHC	3 cut(s)	1031, 2107, 2400
SfaNI	GCATC	6 cut(s)	1066, 1081, 1774, 2422, 2444, 2490
SfcI	CTRYAG	2 cut(s)	496, 2342
Sfr274I	CTCGAG	1 cut(s)	2467
SinI	GGWCC	3 cut(s)	104, 1961, 2425
SlaI	CTCGAG	1 cut(s)	2467
SmiMI	CAYNNNNRTG	5 cut(s)	870, 1857, 1884, 2233, 2486
SmlI	CTYRAG	5 cut(s)	171, 1348, 1811, 2213, 2467
SmoI	CTYRAG	5 cut(s)	171, 1348, 1811, 2213, 2467
SpeI	ACTAGT	1 cut(s)	1012
SphI	GCATGC	1 cut(s)	2188
Sse9I	AATT	7 cut(s)	64, 192, 239, 811, 984, 1278, 1634
SsiI	CCGC	9 cut(s)	39, 99, 102, 107, 939, 1031, 1327, 1787, 2038
SspMI	CTAG	3 cut(s)	1013, 2201, 2514
StyD4I	CCNGG	8 cut(s)	209, 770, 1259, 1796, 2322, 2427, 2440, 2508
StyI	CCWWGG	3 cut(s)	375, 1297, 1528
TaaI	ACNGT	2 cut(s)	1703, 1993
TaiI	ACGT	3 cut(s)	744, 2067, 2581
TaqI	TCGA	7 cut(s)	339, 471, 533, 830, 1522, 2448, 2468
TasI	AATT	7 cut(s)	64, 192, 239, 811, 984, 1278, 1634
TatI	WGTACW	2 cut(s)	1770, 2028
TauI	GCSGC	4 cut(s)	102, 1329, 1789, 2041
TfiI	GAWTC	3 cut(s)	836, 1723, 2522
Tru1I	TTAA	3 cut(s)	423, 1596, 1890
Tru9I	TTAA	3 cut(s)	423, 1596, 1890
TscAI	CASTG	5 cut(s)	570, 1059, 1695, 1996, 2482
TseFI	GTSAC	6 cut(s)	415, 1320, 1469, 1562, 2458, 2516
Tsp45I	GTSAC	6 cut(s)	415, 1320, 1469, 1562, 2458, 2516
TspRI	CASTG	5 cut(s)	570, 1059, 1695, 1996, 2482
VpaK11BI	GGWCC	3 cut(s)	104, 1961, 2425
XapI	RAATTY	4 cut(s)	192, 239, 984, 1634
XceI	RCATGY	1 cut(s)	2188
XhoI	CTCGAG	1 cut(s)	2467
XmiI	GTMKAC	4 cut(s)	993, 1333, 1554, 1731
XmnI	GAANNNNTTC	1 cut(s)	1722
XspI	CTAG	3 cut(s)	1013, 2201, 2514
ZrmI	AGTACT	1 cut(s)	2030
Zsp2I	ATGCAT	1 cut(s)	2437

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.