RLG00000026012

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
OG0019002
Physical Location & Seq
Reverse (-)
49899136 .. 49905653
6518 bp
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UTR
Exon/CDS
Intron
RLM00000026012

Sequence Viewer

Length: 2022 bp
ATGGTGAAGGCACAAGGAGCGAGCGATCACCTCGTGAAAATTTTCCCCGAAAATATGCAGGATGAGAACTCCAAAGATCAGTTTCTAATTCAATCCAAGTCAGGGGGTACCCAGGTTTTATGGAATAATGTACAGAAATTGAAATCTGAGCCTGTGTATAAGAATTCTTTCGTGACCGAAAGCTTATGGTCCCCTTTAGGGACTTATTTGGCAAATGTTAAGAAGCAGGATATCATTCTTTTTAGAGGCACCTCTGCCTTTCATCATGTGGCCACCTGTCTGCATCCCAAGGTTTTTGAGGTGAAATGGGTTGATTTTTCGCCTGGTGAGAATTATTTGGTGTCCTACAGTGTCGAACAAAAAAACACTGGTGAAATAAGCAGAGCTGCAATAAGCATTTTTGATGTGAAAACTGGAAAAGTTGTGAAAAAAATTGTGGGAGGTCCTCATGATTTTGCAAATAAAGGAGTTGGGGCATCTTGGCCCATTTTCAAATGGTCTGGTGGAAGAGATGACAAGTATTTTTCCCTAATCAGCAAGAATGTTATCTCTATTTATGAGATAAATACATTTACAGCCGTATTGACGGTAGGGAATGTCATGGACTTCAGTTGGTCACCAACTGATGCGATTCTTGCTCTCTTTGTATCAGAATCGGTTGATGCTGGTGGTGCCATACCTGCTTTGGTGAAACTTGTTCAAATACCCAGTAAAGAGCAGTTGATTGAGAAGAAGCTTTCTAGTGTTAGTAAGTGCAAGATGTACTGGCAAAGCAATGGGGAGTATCTTGCTATGAAAGTTGACAGCAGTACAAACAATTTCGTTGAGCTTTTCCAAATTAAAGATCGAGGCATCGATAATAAAATTTTGGAGCTCCCATATAATAAGGACAAGGTCACTGCTTTTGCTTGGGAACCAAAGGGCCATAGGTTTGCTATTATTCAGAGTAATGAAGATATTAGTTTCTACTCCATGCGGGATGCTGCCAGCACAGGCTGTGTTTCATTGCTCACGATTCTCAGAAGCAAGGGGACAAACTATCTCTTTTGGTCACCTTCAGGTGGCCTCATAATACTTGCAAGGTTGAATGGTTCCAATGGGAATTTGGAATTTTTCAATGTGGATGAGCTTCGGACAGTTGCTATATCTAAACATATAGCAACGGCTCTCGAGTGGAACCCAACCGGGAGATATGTTGCTACTTCTACTCCTGGGACTTGTCATGAGAAGCCGAGTTTTAACATTTGGTCTTTTGATGGCCACCTACTCTACCAATTACCGAAGGATCTCTTCACAAAGTTTTCATGGCGACCAAGGCCACTCAACATGGCGACTAAGGCTATTATGGGGTCCATGAGCCATAACAGCTTGCATTCACTCAACATGGAAGATGATGAGTATTCACTCAACATGGAAGATGATGATAATTCCATGAGTTTGACTGGGGGTATCAAGAAGTCTGTGGCTTTCTCGGAAAAGTTTCACGAAGATTTGGATGCCTTTTTTAGGCTGGATGATGAGGAAAGGCAGTTATTGAAAGACCTCAAGTACCTCACTTTGGGCCCCGCTTCTCAAAAACCTAAGGAGAAAGATATAGTCATAGTTATCAGTGATGATGAGGAGGAGGAAAAGCATGTATTGATGAACCTTAAATACCTTGCTTCGAGCTCCACTTCTAAAAAACCTGAGGGGGCAGATGTAGTCATAGGTATCAGTGACGAGGAGGAGGAAAAGATGGCTTTGCAGCCATCTTCTCCAAAGAAAACACTTCCAATGGCTGGGCAAACCAAGGAAAGACGGTTCCATAGAAAATGGACCAAAGAAGAAGAAGAGGCTTTAAGGCATGGTTATAAAAAGTATAAAACAAATTGGAAATTGATTTTGGGTGATCCAGCCTACAAAGCTTGCCATGGCAGAACTAATGTTGATTTGAAAGACAAATGGCGGAATTTGATGAGGGCTGATGACAGGGCTAAGGCGAAGGCCTGCTACTCATTACCAAATGGAATTGATGGTACGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005852 GO:0032991 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
ko03013 map03013
Pfam Domains
Protein Families
RRM_1 eIF2A

Protein Analysis

674

Amino Acids

75.81

Weight (kDa)

7.96

Isoelectric Point (pI)

35.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
eIF2A PF08662 244 - 431 5.9e-32 Eukaryotic translation initiation factor eIF2A
Beta-prop_WDR19_1st PF23389 254 - 385 1.5e-06 WDR19 first beta-propeller
Beta-prop_THOC3 PF25174 273 - 403 1.4e-07 THOC3 beta-propeller domain
Myb_DNA-binding PF00249 603 - 651 4.6e-07 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 605 - 655 3.7e-07 Myb-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0019002)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr4g0447321
rosa_laevigata RLG00000026012
rosa_multiflora Rmu_ssc0000396.1_g000008
rosa_roxburghii Rroxscaffold_5G00387700
rosa_samantha Rh4AG441000 Rh4BG450300 Rh4CG467400 Rh4DG448700
rosa_wichuraiana Rw4G037750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1851
Acc36I ACCTGC 1 cut(s) 688
Acc65I GGTACC 1 cut(s) 107
AccB1I GGYRCC 3 cut(s) 107, 248, 671
AccB7I CCANNNNNTGG 1 cut(s) 1778
AciI CCGC 3 cut(s) 976, 1566, 1945
AclWI GGATC 2 cut(s) 1293, 1883
AcoI YGGCCR 2 cut(s) 270, 1258
AcsI RAATTY 6 cut(s) 39, 163, 864, 1102, 1109, 1948
AcuI CTGAAG 2 cut(s) 592, 1041
AdeI CACNNNGTG 1 cut(s) 34
AfaI GTAC 6 cut(s) 109, 132, 764, 811, 1550, 2017
AfiI CCNNNNNNNGG 6 cut(s) 102, 198, 1061, 1506, 1558, 1778
AgsI TTSAA 8 cut(s) 92, 142, 493, 701, 1087, 1117, 1537, 1933
AjnI CCWGG 3 cut(s) 111, 322, 1210
AjuI GAANNNNNNNTTGG 2 cut(s) 1865, 1897
AloI GAACNNNNNNTCC 2 cut(s) 1784, 1816
AluBI AGCT 9 cut(s) 183, 386, 736, 829, 874, 1129, 1368, 1668, 1904
AluI AGCT 9 cut(s) 183, 386, 736, 829, 874, 1129, 1368, 1668, 1904
Alw21I GWGCWC 2 cut(s) 876, 1670
AlwI GGATC 2 cut(s) 1293, 1883
Ama87I CYCGRG 1 cut(s) 1169
AoxI GGCC 8 cut(s) 270, 482, 922, 1063, 1258, 1316, 1561, 1983
ApaI GGGCCC 1 cut(s) 1565
ApeKI GCWGC 3 cut(s) 386, 983, 1744
ApoI RAATTY 6 cut(s) 39, 163, 864, 1102, 1109, 1948
Asp700I GAANNNNTTC 3 cut(s) 41, 167, 1479
Asp718I GGTACC 1 cut(s) 107
AspS9I GGNCC 8 cut(s) 189, 443, 483, 922, 1350, 1561, 1562, 1815
AsuC2I CCSGG 1 cut(s) 1186
AsuHPI GGTGA 9 cut(s) 16, 20, 313, 338, 383, 609, 700, 1044, 1898
AvaI CYCGRG 1 cut(s) 1169
AvaII GGWCC 4 cut(s) 189, 443, 1350, 1815
AxyI CCTNAGG 2 cut(s) 1581, 1686
BaeGI GKGCMC 1 cut(s) 1565
BaeI ACNNNNGTAYC 2 cut(s) 99, 132
BalI TGGCCA 2 cut(s) 272, 1260
BanI GGYRCC 3 cut(s) 107, 248, 671
BanII GRGCYC 3 cut(s) 876, 1565, 1670
BarI GAAGNNNNNNTAC 2 cut(s) 1973, 2005
BauI CACGAG 1 cut(s) 32
Bbv12I GWGCWC 2 cut(s) 876, 1670
BbvI GCAGC 3 cut(s) 373, 970, 1756
BccI CCATC 4 cut(s) 1250, 1729, 1756, 2006
BceAI ACGGC 2 cut(s) 563, 1179
BciT130I CCWGG 3 cut(s) 113, 324, 1212
BcnI CCSGG 1 cut(s) 1186
BfaI CTAG 1 cut(s) 741
BfmI CTRYAG 1 cut(s) 346
BfuAI ACCTGC 1 cut(s) 688
BisI GCNGC 3 cut(s) 387, 984, 1745
BlsI GCNGC 3 cut(s) 388, 985, 1746
Bme1390I CCNGG 4 cut(s) 113, 324, 1186, 1212
Bme18I GGWCC 4 cut(s) 189, 443, 1350, 1815
BmeT110I CYCGRG 1 cut(s) 1169
BmgT120I GGNCC 8 cut(s) 189, 443, 483, 922, 1350, 1561, 1562, 1815
BmrFI CCNGG 4 cut(s) 113, 324, 1186, 1212
BmrI ACTGGG 2 cut(s) 702, 1452
BmsI GCATC 7 cut(s) 292, 485, 616, 652, 861, 970, 1486
BmuI ACTGGG 2 cut(s) 702, 1452
Bpu10I CCTNAGC 1 cut(s) 1974
BpuEI CTTGAG 1 cut(s) 1529
BpuMI CCSGG 1 cut(s) 1186
Bsa29I ATCGAT 1 cut(s) 855
BsaAI YACGTR 1 cut(s) 2019
BsaJI CCNNGG 6 cut(s) 111, 288, 1211, 1313, 1788, 1909
BsaXI ACNNNNNCTCC 2 cut(s) 1192, 1222
Bsc4I CCNNNNNNNGG 6 cut(s) 102, 198, 1061, 1506, 1558, 1778
Bse1I ACTGG 5 cut(s) 373, 418, 708, 770, 1447
Bse21I CCTNAGG 2 cut(s) 1581, 1686
Bse3DI GCAATG 2 cut(s) 781, 1004
BseBI CCWGG 3 cut(s) 113, 324, 1212
BseCI ATCGAT 1 cut(s) 855
BseDI CCNNGG 6 cut(s) 111, 288, 1211, 1313, 1788, 1909
BseGI GGATG 6 cut(s) 67, 283, 985, 1129, 1501, 1519
BseLI CCNNNNNNNGG 6 cut(s) 102, 198, 1061, 1506, 1558, 1778
BseMI GCAATG 2 cut(s) 781, 1004
BseMII CTCAG 3 cut(s) 138, 1033, 1677
BseNI ACTGG 5 cut(s) 373, 418, 708, 770, 1447
BseRI GAGGAG 4 cut(s) 1634, 1637, 1736, 1739
BseSI GKGCMC 1 cut(s) 1565
BseXI GCAGC 3 cut(s) 373, 970, 1756
BseYI CCCAGC 1 cut(s) 1778
BshFI GGCC 8 cut(s) 272, 484, 924, 1065, 1260, 1318, 1563, 1985
BshNI GGYRCC 3 cut(s) 107, 248, 671
BshVI ATCGAT 1 cut(s) 855
BsiHKAI GWGCWC 2 cut(s) 876, 1670
BsiHKCI CYCGRG 1 cut(s) 1169
BsiSI CCGG 1 cut(s) 1185
BslFI GGGAC 4 cut(s) 175, 214, 1045, 1228
BslI CCNNNNNNNGG 6 cut(s) 102, 198, 1061, 1506, 1558, 1778
BsmFI GGGAC 4 cut(s) 175, 214, 1045, 1228
BsmI GAATGC 1 cut(s) 1372
BsnI GGCC 8 cut(s) 272, 484, 924, 1065, 1260, 1318, 1563, 1985
BsoBI CYCGRG 1 cut(s) 1169
Bsp120I GGGCCC 1 cut(s) 1561
Bsp1286I GDGCHC 3 cut(s) 876, 1565, 1670
Bsp1407I TGTACA 1 cut(s) 130
Bsp143I GATC 5 cut(s) 25, 76, 844, 1285, 1888
Bsp19I CCATGG 1 cut(s) 1909
BspACI CCGC 3 cut(s) 976, 1566, 1945
BspANI GGCC 8 cut(s) 272, 484, 924, 1065, 1260, 1318, 1563, 1985
BspCNI CTCAG 3 cut(s) 139, 1032, 1678
BspDI ATCGAT 1 cut(s) 855
BspHI TCATGA 2 cut(s) 448, 1222
BspMI ACCTGC 1 cut(s) 688
BspPI GGATC 2 cut(s) 1293, 1883
BspT107I GGYRCC 3 cut(s) 107, 248, 671
BsrDI GCAATG 2 cut(s) 781, 1004
BsrGI TGTACA 1 cut(s) 130
BsrI ACTGG 5 cut(s) 373, 418, 708, 770, 1447
BssECI CCNNGG 6 cut(s) 111, 288, 1211, 1313, 1788, 1909
BssMI GATC 5 cut(s) 25, 76, 844, 1285, 1888
BssSI CACGAG 1 cut(s) 32
BssT1I CCWWGG 4 cut(s) 288, 1313, 1788, 1909
Bst2BI CACGAG 1 cut(s) 32
Bst2UI CCWGG 3 cut(s) 113, 324, 1212
Bst4CI ACNGT 4 cut(s) 350, 589, 1138, 1800
Bst6I CTCTTC 3 cut(s) 502, 1295, 1824
BstAUI TGTACA 1 cut(s) 130
BstBAI YACGTR 1 cut(s) 2019
BstC8I GCNNGC 5 cut(s) 22, 988, 1370, 1906, 1987
BstDEI CTNAG 6 cut(s) 147, 1019, 1335, 1581, 1686, 1974
BstDSI CCRYGG 1 cut(s) 1909
BstEII GGTNACC 2 cut(s) 615, 1050
BstENI CCTNNNNNAGG 1 cut(s) 1504
BstF5I GGATG 6 cut(s) 67, 283, 985, 1129, 1501, 1519
BstKTI GATC 5 cut(s) 28, 79, 847, 1288, 1891
BstMBI GATC 5 cut(s) 25, 76, 844, 1285, 1888
BstMWI GCNNNNNNNGC 8 cut(s) 17, 635, 671, 680, 1315, 1337, 1365, 1901
BstNI CCWGG 3 cut(s) 113, 324, 1212
BstNSI RCATGY 1 cut(s) 1637
BstPI GGTNACC 2 cut(s) 615, 1050
BstSCI CCNGG 4 cut(s) 111, 322, 1184, 1210
BstSFI CTRYAG 1 cut(s) 346
BstSLI GKGCMC 1 cut(s) 1565
BstV1I GCAGC 3 cut(s) 373, 970, 1756
BstX2I RGATCY 1 cut(s) 1285
BstYI RGATCY 1 cut(s) 1285
Bsu15I ATCGAT 1 cut(s) 855
Bsu36I CCTNAGG 2 cut(s) 1581, 1686
BsuRI GGCC 8 cut(s) 272, 484, 924, 1065, 1260, 1318, 1563, 1985
BsuTUI ATCGAT 1 cut(s) 855
BtgI CCRYGG 1 cut(s) 1909
BtsCI GGATG 6 cut(s) 67, 283, 985, 1129, 1501, 1519
BtsI GCAGTG 1 cut(s) 897
BtsIMutI CAGTG 5 cut(s) 355, 366, 897, 1615, 1720
BveI ACCTGC 1 cut(s) 688
Cac8I GCNNGC 5 cut(s) 22, 988, 1370, 1906, 1987
CciI TCATGA 2 cut(s) 448, 1222
Cfr13I GGNCC 8 cut(s) 189, 443, 483, 922, 1350, 1561, 1562, 1815
ClaI ATCGAT 1 cut(s) 855
Csp6I GTAC 6 cut(s) 108, 131, 763, 810, 1549, 2016
CviQI GTAC 6 cut(s) 108, 131, 763, 810, 1549, 2016
DdeI CTNAG 6 cut(s) 147, 1019, 1335, 1581, 1686, 1974
DpnI GATC 5 cut(s) 27, 78, 846, 1287, 1890
DpnII GATC 5 cut(s) 25, 76, 844, 1285, 1888
DraIII CACNNNGTG 1 cut(s) 34
EaeI YGGCCR 2 cut(s) 270, 1258
Eam1104I CTCTTC 3 cut(s) 502, 1295, 1824
EarI CTCTTC 3 cut(s) 502, 1295, 1824
EciI GGCGGA 1 cut(s) 1960
Ecl136II GAGCTC 2 cut(s) 874, 1668
Eco130I CCWWGG 4 cut(s) 288, 1313, 1788, 1909
Eco147I AGGCCT 1 cut(s) 1985
Eco24I GRGCYC 3 cut(s) 876, 1565, 1670
Eco32I GATATC 1 cut(s) 232
Eco47I GGWCC 4 cut(s) 189, 443, 1350, 1815
Eco53kI GAGCTC 2 cut(s) 874, 1668
Eco57I CTGAAG 2 cut(s) 592, 1041
Eco81I CCTNAGG 2 cut(s) 1581, 1686
Eco88I CYCGRG 1 cut(s) 1169
Eco91I GGTNACC 2 cut(s) 615, 1050
EcoICRI GAGCTC 2 cut(s) 874, 1668
EcoNI CCTNNNNNAGG 1 cut(s) 1504
EcoO109I RGGNCCY 2 cut(s) 443, 1562
EcoO65I GGTNACC 2 cut(s) 615, 1050
EcoRI GAATTC 1 cut(s) 163
EcoRII CCWGG 3 cut(s) 111, 322, 1210
EcoRV GATATC 1 cut(s) 232
EcoT14I CCWWGG 4 cut(s) 288, 1313, 1788, 1909
EcoT38I GRGCYC 3 cut(s) 876, 1565, 1670
ErhI CCWWGG 4 cut(s) 288, 1313, 1788, 1909
FalI AAGNNNNNCTT 2 cut(s) 1274, 1306
FaqI GGGAC 4 cut(s) 175, 214, 1045, 1228
FauI CCCGC 2 cut(s) 969, 1573
Fnu4HI GCNGC 3 cut(s) 387, 984, 1745
FokI GGATG 6 cut(s) 74, 270, 992, 1136, 1508, 1526
FriOI GRGCYC 3 cut(s) 876, 1565, 1670
Fsp4HI GCNGC 3 cut(s) 387, 984, 1745
FspBI CTAG 1 cut(s) 741
GluI GCNGC 3 cut(s) 387, 984, 1745
GsaI CCCAGC 1 cut(s) 1782
HaeIII GGCC 8 cut(s) 272, 484, 924, 1065, 1260, 1318, 1563, 1985
HapII CCGG 1 cut(s) 1185
HincII GTYRAC 1 cut(s) 802
HindII GTYRAC 1 cut(s) 802
HindIII AAGCTT 3 cut(s) 181, 734, 1902
HinfI GANTC 3 cut(s) 631, 653, 1015
HpaII CCGG 1 cut(s) 1185
HphI GGTGA 9 cut(s) 16, 20, 313, 338, 383, 609, 700, 1044, 1898
Hpy166II GTNNAC 1 cut(s) 802
Hpy188I TCNGA 6 cut(s) 148, 652, 945, 1022, 1134, 1474
Hpy188III TCNNGA 8 cut(s) 34, 172, 449, 1012, 1169, 1223, 1453, 1484
Hpy8I GTNNAC 1 cut(s) 802
HpyAV CCTTC 3 cut(s) 1065, 1276, 1975
HpyCH4III ACNGT 4 cut(s) 350, 589, 1138, 1800
HpyCH4IV ACGT 1 cut(s) 2018
HpyCH4V TGCA 8 cut(s) 58, 283, 389, 458, 756, 1079, 1372, 1744
HpyF10VI GCNNNNNNNGC 8 cut(s) 17, 635, 671, 680, 1315, 1337, 1365, 1901
HpyF3I CTNAG 6 cut(s) 147, 1019, 1335, 1581, 1686, 1974
HpySE526I ACGT 1 cut(s) 2018
KpnI GGTACC 1 cut(s) 111
Kzo9I GATC 5 cut(s) 25, 76, 844, 1285, 1888
LmnI GCTCC 4 cut(s) 17, 871, 879, 1673
Lsp1109I GCAGC 3 cut(s) 373, 970, 1756
LweI GCATC 7 cut(s) 292, 485, 616, 652, 861, 970, 1486
MaeI CTAG 1 cut(s) 741
MaeII ACGT 1 cut(s) 2018
MaeIII GTNAC 5 cut(s) 172, 615, 895, 1050, 1715
MalI GATC 5 cut(s) 27, 78, 846, 1287, 1890
MboI GATC 5 cut(s) 25, 76, 844, 1285, 1888
MflI RGATCY 1 cut(s) 1285
MhlI GDGCHC 3 cut(s) 876, 1565, 1670
MlsI TGGCCA 2 cut(s) 272, 1260
MluNI TGGCCA 2 cut(s) 272, 1260
Mox20I TGGCCA 2 cut(s) 272, 1260
MroXI GAANNNNTTC 3 cut(s) 41, 167, 1479
MscI TGGCCA 2 cut(s) 272, 1260
MseI TTAA 5 cut(s) 219, 840, 1239, 1650, 1838
Msp20I TGGCCA 2 cut(s) 272, 1260
MspI CCGG 1 cut(s) 1185
MspR9I CCNGG 4 cut(s) 113, 324, 1186, 1212
Mva1269I GAATGC 1 cut(s) 1372
MvaI CCWGG 3 cut(s) 113, 324, 1212
MwoI GCNNNNNNNGC 8 cut(s) 17, 635, 671, 680, 1315, 1337, 1365, 1901
NciI CCSGG 1 cut(s) 1186
NcoI CCATGG 1 cut(s) 1909
NdeII GATC 5 cut(s) 25, 76, 844, 1285, 1888
NmeAIII GCCGAG 1 cut(s) 1257
NmuCI GTSAC 5 cut(s) 172, 615, 895, 1050, 1715
NspI RCATGY 1 cut(s) 1637
PaeR7I CTCGAG 1 cut(s) 1169
PagI TCATGA 2 cut(s) 448, 1222
PceI AGGCCT 1 cut(s) 1985
PctI GAATGC 1 cut(s) 1372
PdmI GAANNNNTTC 3 cut(s) 41, 167, 1479
PfeI GAWTC 3 cut(s) 631, 653, 1015
PflFI GACNNNGTC 1 cut(s) 893
PflMI CCANNNNNTGG 1 cut(s) 1778
PkrI GCNGC 3 cut(s) 388, 985, 1746
Ppu21I YACGTR 1 cut(s) 2019
PpuMI RGGWCCY 1 cut(s) 443
PsiI TTATAA 1 cut(s) 1851
Psp124BI GAGCTC 2 cut(s) 876, 1670
Psp5II RGGWCCY 1 cut(s) 443
Psp6I CCWGG 3 cut(s) 111, 322, 1210
PspEI GGTNACC 2 cut(s) 615, 1050
PspFI CCCAGC 1 cut(s) 1778
PspGI CCWGG 3 cut(s) 111, 322, 1210
PspOMI GGGCCC 1 cut(s) 1561
PspPI GGNCC 8 cut(s) 189, 443, 483, 922, 1350, 1561, 1562, 1815
PspPPI RGGWCCY 1 cut(s) 443
PsrI GAACNNNNNNTAC 2 cut(s) 1637, 1669
PsuI RGATCY 1 cut(s) 1285
PsyI GACNNNGTC 1 cut(s) 893
RsaI GTAC 6 cut(s) 109, 132, 764, 811, 1550, 2017
RsaNI GTAC 6 cut(s) 108, 131, 763, 810, 1549, 2016
SacI GAGCTC 2 cut(s) 876, 1670
SaqAI TTAA 5 cut(s) 219, 840, 1239, 1650, 1838
SatI GCNGC 3 cut(s) 387, 984, 1745
Sau3AI GATC 5 cut(s) 25, 76, 844, 1285, 1888
Sau96I GGNCC 8 cut(s) 189, 443, 483, 922, 1350, 1561, 1562, 1815
ScrFI CCNGG 4 cut(s) 113, 324, 1186, 1212
SduI GDGCHC 3 cut(s) 876, 1565, 1670
SfaNI GCATC 7 cut(s) 292, 485, 616, 652, 861, 970, 1486
SfcI CTRYAG 1 cut(s) 346
Sfr274I CTCGAG 1 cut(s) 1169
SinI GGWCC 4 cut(s) 189, 443, 1350, 1815
SlaI CTCGAG 1 cut(s) 1169
SmlI CTYRAG 2 cut(s) 1169, 1544
SmoI CTYRAG 2 cut(s) 1169, 1544
SseBI AGGCCT 1 cut(s) 1985
SsiI CCGC 3 cut(s) 976, 1566, 1945
SspMI CTAG 1 cut(s) 741
SstI GAGCTC 2 cut(s) 876, 1670
StuI AGGCCT 1 cut(s) 1985
StyD4I CCNGG 4 cut(s) 111, 322, 1184, 1210
StyI CCWWGG 4 cut(s) 288, 1313, 1788, 1909
TaaI ACNGT 4 cut(s) 350, 589, 1138, 1800
TaiI ACGT 1 cut(s) 2021
TaqI TCGA 5 cut(s) 354, 847, 855, 1170, 1664
TaqII GACCGA 1 cut(s) 191
TatI WGTACW 3 cut(s) 130, 762, 809
TfiI GAWTC 3 cut(s) 631, 653, 1015
Tru1I TTAA 5 cut(s) 219, 840, 1239, 1650, 1838
Tru9I TTAA 5 cut(s) 219, 840, 1239, 1650, 1838
TscAI CASTG 5 cut(s) 355, 373, 904, 1615, 1720
TseFI GTSAC 5 cut(s) 172, 615, 895, 1050, 1715
TseI GCWGC 3 cut(s) 386, 983, 1744
Tsp45I GTSAC 5 cut(s) 172, 615, 895, 1050, 1715
TspDTI ATGAA 6 cut(s) 251, 809, 966, 993, 1293, 1658
TspRI CASTG 5 cut(s) 355, 373, 904, 1615, 1720
Tth111I GACNNNGTC 1 cut(s) 893
Van91I CCANNNNNTGG 1 cut(s) 1778
VpaK11BI GGWCC 4 cut(s) 189, 443, 1350, 1815
XagI CCTNNNNNAGG 1 cut(s) 1504
XapI RAATTY 6 cut(s) 39, 163, 864, 1102, 1109, 1948
XceI RCATGY 1 cut(s) 1637
XcmI CCANNNNNNNNNTGG 2 cut(s) 682, 1102
XhoI CTCGAG 1 cut(s) 1169
XmnI GAANNNNTTC 3 cut(s) 41, 167, 1479
XspI CTAG 1 cut(s) 741
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.