Rh4CG467400

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
OG0019002
Physical Location & Seq
Reverse (-)
69663906 .. 69671543
7638 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG467400.1

Sequence Viewer

Length: 2322 bp
ATGTTTCCGATGCCTAACCCAATTGATGACATCATCATCCTCCCGCCACATGACCATCCATGCTTATCATTGTGGGACAGACTCCTGAACTTGAACTTCATTATCCAAAACATAAACAAGATCTTCTTCACAAGTAATATTGTACCAGAAATCCTTTCCTCTGTCTCGTCTCTCTCATTTTGTAACATCCAGAAGTCCACTCCTCTCTGTCTCGTCTTTCTGATTTTGTCTCTGTCAATTGTAGCGAGAAACATTTTTCAGGACTCTGAAATGGTGAAGGCACAAGGAGCGAGCGATCACCTCGTGAAAATTTTCCCTGAAAATATGCAGGACATTTCACAGGATGAGAACTCCAAAGGTCAGTTTCTAATTCAATCCAAGTCAGGGGGTACCCAGGTTTTATGGAATAATGTGCAGAAATTGAAACCTGAGCTCGTGTACAAGAATTCTTTCGTGACCGAAAGCTTATGGTCCCCTTTAGGGACTTATTTGGCAAATGTTAAGAAGCAGGATATCATTCTTTTTAGAGGCACCTCTGCCTTACATCATGTGGCCACCTGTCTGCATCCCAAGGTTTTTGAGGTGAAATGGGTTGATTTTTCGCCTGGTGAGAATTATTTGGTGTCCTACAGTGTTGAACAAAAAAACACTGGTGAAATAAGCAGAGCTGCCATAAGCATTTTTGATGTGAAAACTGGAAAAGTTGTGAAAAAAATTGTGGGAGGTCCTCATGATTTTGCAAATAAAGGAGTTGGGGCGTCTTGGCCCATTTTCAAATGGTCCGGTGGAAGAGATGACAAGTATTTTGCCCTAATCAGCAAGAATGTTATCTCTATTTATGAGATAAATACATTTACAGCCGTATTGACGGTAGGGAATGTCATGGACTTCAGTTGGTCACCAACTGATGCGATTCTTGCTCTCTTTGTATCAGAATCGGTTGATGCTGGTGGTGCCATACCTGCTTTGGTGAAACTTGTTCAAATACCCAGTAAAGAGCAGTTGATTGAGAAGAAGCTTTCTAGTGTTAGTAAGTGCAAGATGTACTGGCAAAGCAATGGGGAGTATCTTGCTATGAAAGTTGACAGCAGTACAAACAATTTTGTTGAGCTTTTCCAAATTAAAGATCGAGGCATCGATAATAAAATTTTGGAGCTCCCGTACAATAAGGACAAGGTCACTGCTTTTGCTTGGGAACCCAAGGGCCATAGGTTTGCTATTATTCAGAGTAATGAAGATATTAGTTTCTACTCCATGCGGGATGCTGCCAGCACAGGCTGTATTTCATTGCTCACGATTCTCAGAAGCAAGGGGACAAACTATCTCTTTTGGTCACCTTCAGGTGGCCTCATAATACTTGCAAGGTTGAATGGTTCCAATGGGAATTTGGAATTTTTCAATGTGGATGAGCTTCAGACAGTTGCTATATCTAAACATATAGCAACGGCTCTCGAGTGGAACCCAACCGGGAGATATGTTGCTACTTCTACTCCTGGGACTTGTCATGAGAAGCCGAGTTTTAACATTTGGTCTTTTGATGGCCACCTACTCTACCAATTACCGAAGGATCTCTTCACAAAGTTTTCATGGCGACCAAGGCCACTCAACATGGTGACTAAGGCTATTATGGGGTCCATGAGCCATAACAGCTTGCATTCACTCAACATGGAAGATGATGAGTATTCACTCAACATGGAAGATGATGAGTATTCACTCAACATGGAAGATGATGATAATTCCATGAGTTTGACTGGGGGTATCAAGAAGTCTGTGGCTCTCTTGGAAAAGTTTCACGAAGATTTGGATGCCTTTTATAGGCTGGATGATGAGGAAAGGCAGTTATTGATAGACCTCAAGTACCTCACTTTGAGCCCCGCTTCTCAAAAACCTAAGGAGAAAGATGTAGTCATAGTTATCAGTGATGATGAGGAGGAGGAAAAGCATGTATTGATGAACCTTAAATACCTTGCTTCGAGCTCCACTTCTAAAAAACCTGAGGGGGCAGATGTAGTCATAGGTATCAGTGACGAGGAGGAAAAGATGGCTTTGCAGCCATCTTCTCCAAAGAAAACACTTCCAATGGCTGGGCAAACCAAGGAAAGACGGTTCCATAGAAAATGGACCAAAGAAGAAGAAGAGGCTTTAAGGCATGGTTATAAAAAGTATAAAACAAATTGGAAATTGATTTTGGGTGATCCAGCCTACAGAGCTTGCCATGGCAGAACTAATGTTGATTTGAAAGACAAATGGCGGAATTTGATGAGGGCTAATGACAGGGATGAGGCGAAGGCCTGCTCCTCATTACCAAGTACGAAGCTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005852 GO:0032991 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
ko03013 map03013
Pfam Domains
Protein Families
RRM_1 eIF2A

Protein Analysis

773

Amino Acids

87.25

Weight (kDa)

6.35

Isoelectric Point (pI)

39.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
eIF2A PF08662 338 - 525 6.7e-32 Eukaryotic translation initiation factor eIF2A
Beta-prop_WDR19_1st PF23389 348 - 479 5.9e-06 WDR19 first beta-propeller
Beta-prop_THOC3 PF25174 363 - 497 7.9e-08 THOC3 beta-propeller domain
Myb_DNA-binding PF00249 705 - 753 6.5e-07 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 707 - 759 4.7e-07 Myb-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0019002)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr4g0447321
rosa_laevigata RLG00000026012
rosa_multiflora Rmu_ssc0000396.1_g000008
rosa_roxburghii Rroxscaffold_5G00387700
rosa_samantha Rh4AG441000 Rh4BG450300 Rh4CG467400 Rh4DG448700
rosa_wichuraiana Rw4G037750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2157
Acc36I ACCTGC 1 cut(s) 970
Acc65I GGTACC 1 cut(s) 389
AccB1I GGYRCC 3 cut(s) 389, 530, 953
AccB7I CCANNNNNTGG 1 cut(s) 2084
AciI CCGC 4 cut(s) 44, 1258, 1875, 2251
AclWI GGATC 2 cut(s) 1575, 2189
AcoI YGGCCR 2 cut(s) 552, 1540
AcsI RAATTY 6 cut(s) 309, 445, 1146, 1384, 1391, 2254
AcuI CTGAAG 3 cut(s) 874, 1323, 1397
AcyI GRCGYC 1 cut(s) 758
AdeI CACNNNGTG 1 cut(s) 304
AfaI GTAC 8 cut(s) 144, 391, 440, 1046, 1093, 1163, 1859, 2311
AfiI CCNNNNNNNGG 5 cut(s) 384, 480, 1343, 1815, 2084
AgsI TTSAA 9 cut(s) 94, 374, 424, 638, 775, 983, 1369, 1399, 2239
AjnI CCWGG 3 cut(s) 393, 604, 1492
AjuI GAANNNNNNNTTGG 2 cut(s) 2171, 2203
AloI GAACNNNNNNTCC 2 cut(s) 2090, 2122
Alw21I GWGCWC 3 cut(s) 435, 1158, 1979
Alw26I GTCTC 4 cut(s) 169, 174, 215, 234
AlwI GGATC 2 cut(s) 1575, 2189
Ama87I CYCGRG 1 cut(s) 1451
AoxI GGCC 7 cut(s) 552, 764, 1204, 1345, 1540, 1598, 2289
ApeKI GCWGC 3 cut(s) 668, 1265, 2050
ApoI RAATTY 6 cut(s) 309, 445, 1146, 1384, 1391, 2254
ArsI GACNNNNNNTTYG 2 cut(s) 788, 820
Asp700I GAANNNNTTC 3 cut(s) 311, 449, 1788
Asp718I GGTACC 1 cut(s) 389
AspS9I GGNCC 7 cut(s) 471, 725, 765, 780, 1204, 1632, 2121
AsuC2I CCSGG 1 cut(s) 1468
AvaI CYCGRG 1 cut(s) 1451
AvaII GGWCC 5 cut(s) 471, 725, 780, 1632, 2121
AxyI CCTNAGG 2 cut(s) 1890, 1995
BaeI ACNNNNGTAYC 2 cut(s) 381, 414
BalI TGGCCA 2 cut(s) 554, 1542
BanI GGYRCC 3 cut(s) 389, 530, 953
BanII GRGCYC 4 cut(s) 435, 1158, 1874, 1979
BauI CACGAG 2 cut(s) 302, 434
Bbv12I GWGCWC 3 cut(s) 435, 1158, 1979
BbvI GCAGC 3 cut(s) 655, 1252, 2062
BccI CCATC 4 cut(s) 63, 1532, 2035, 2062
BceAI ACGGC 2 cut(s) 845, 1461
BciT130I CCWGG 3 cut(s) 395, 606, 1494
BcnI CCSGG 1 cut(s) 1468
BcoDI GTCTC 4 cut(s) 169, 174, 215, 234
BfaI CTAG 1 cut(s) 1023
BfmI CTRYAG 2 cut(s) 628, 2203
BfuAI ACCTGC 1 cut(s) 970
BglII AGATCT 1 cut(s) 120
BisI GCNGC 3 cut(s) 669, 1266, 2051
BlsI GCNGC 3 cut(s) 670, 1267, 2052
Bme1390I CCNGG 4 cut(s) 395, 606, 1468, 1494
Bme18I GGWCC 5 cut(s) 471, 725, 780, 1632, 2121
BmeT110I CYCGRG 1 cut(s) 1451
BmgT120I GGNCC 7 cut(s) 471, 725, 765, 780, 1204, 1632, 2121
BmiI GGNNCC 9 cut(s) 391, 473, 532, 955, 1197, 1375, 1460, 1633, 2108
BmrFI CCNGG 4 cut(s) 395, 606, 1468, 1494
BmrI ACTGGG 2 cut(s) 984, 1761
BmsI GCATC 6 cut(s) 574, 898, 934, 1143, 1252, 1795
BmuI ACTGGG 2 cut(s) 984, 1761
Bpu10I CCTNAGC 1 cut(s) 429
BpuEI CTTGAG 1 cut(s) 1838
BpuMI CCSGG 1 cut(s) 1468
Bsa29I ATCGAT 1 cut(s) 1137
BsaHI GRCGYC 1 cut(s) 758
BsaJI CCNNGG 7 cut(s) 393, 570, 1200, 1493, 1595, 2094, 2215
BsaWI WCCGGW 1 cut(s) 782
BsaXI ACNNNNNCTCC 4 cut(s) 1145, 1175, 1474, 1504
Bsc4I CCNNNNNNNGG 5 cut(s) 384, 480, 1343, 1815, 2084
Bse1I ACTGG 5 cut(s) 655, 700, 990, 1052, 1756
Bse21I CCTNAGG 2 cut(s) 1890, 1995
Bse3DI GCAATG 2 cut(s) 1063, 1286
BseBI CCWGG 3 cut(s) 395, 606, 1494
BseCI ATCGAT 1 cut(s) 1137
BseDI CCNNGG 7 cut(s) 393, 570, 1200, 1493, 1595, 2094, 2215
BseLI CCNNNNNNNGG 5 cut(s) 384, 480, 1343, 1815, 2084
BseMI GCAATG 2 cut(s) 1063, 1286
BseMII CTCAG 3 cut(s) 420, 1315, 1986
BseNI ACTGG 5 cut(s) 655, 700, 990, 1052, 1756
BseRI GAGGAG 5 cut(s) 192, 1943, 1946, 2045, 2287
BseXI GCAGC 3 cut(s) 655, 1252, 2062
BseYI CCCAGC 1 cut(s) 2084
BsgI GTGCAG 1 cut(s) 434
BshFI GGCC 7 cut(s) 554, 766, 1206, 1347, 1542, 1600, 2291
BshNI GGYRCC 3 cut(s) 389, 530, 953
BshVI ATCGAT 1 cut(s) 1137
BsiHKAI GWGCWC 3 cut(s) 435, 1158, 1979
BsiHKCI CYCGRG 1 cut(s) 1451
BsiSI CCGG 2 cut(s) 783, 1467
BslFI GGGAC 5 cut(s) 89, 457, 496, 1327, 1510
BslI CCNNNNNNNGG 5 cut(s) 384, 480, 1343, 1815, 2084
BsmAI GTCTC 4 cut(s) 169, 174, 215, 234
BsmBI CGTCTC 1 cut(s) 174
BsmFI GGGAC 5 cut(s) 89, 457, 496, 1327, 1510
BsmI GAATGC 1 cut(s) 1654
BsnI GGCC 7 cut(s) 554, 766, 1206, 1347, 1542, 1600, 2291
BsoBI CYCGRG 1 cut(s) 1451
Bsp1286I GDGCHC 4 cut(s) 435, 1158, 1874, 1979
Bsp1407I TGTACA 1 cut(s) 438
Bsp143I GATC 5 cut(s) 120, 295, 1126, 1567, 2194
Bsp19I CCATGG 1 cut(s) 2215
BspACI CCGC 4 cut(s) 44, 1258, 1875, 2251
BspANI GGCC 7 cut(s) 554, 766, 1206, 1347, 1542, 1600, 2291
BspCNI CTCAG 3 cut(s) 421, 1314, 1987
BspDI ATCGAT 1 cut(s) 1137
BspHI TCATGA 2 cut(s) 730, 1504
BspLI GGNNCC 9 cut(s) 391, 473, 532, 955, 1197, 1375, 1460, 1633, 2108
BspMI ACCTGC 1 cut(s) 970
BspPI GGATC 2 cut(s) 1575, 2189
BspT107I GGYRCC 3 cut(s) 389, 530, 953
BsrDI GCAATG 2 cut(s) 1063, 1286
BsrGI TGTACA 1 cut(s) 438
BsrI ACTGG 5 cut(s) 655, 700, 990, 1052, 1756
BssECI CCNNGG 7 cut(s) 393, 570, 1200, 1493, 1595, 2094, 2215
BssMI GATC 5 cut(s) 120, 295, 1126, 1567, 2194
BssNI GRCGYC 1 cut(s) 758
BssSI CACGAG 2 cut(s) 302, 434
BssT1I CCWWGG 5 cut(s) 570, 1200, 1595, 2094, 2215
Bst2BI CACGAG 2 cut(s) 302, 434
Bst2UI CCWGG 3 cut(s) 395, 606, 1494
Bst4CI ACNGT 4 cut(s) 632, 871, 1420, 2106
Bst6I CTCTTC 3 cut(s) 784, 1577, 2130
BstACI GRCGYC 1 cut(s) 758
BstAUI TGTACA 1 cut(s) 438
BstC8I GCNNGC 5 cut(s) 292, 1270, 1652, 2212, 2293
BstDEI CTNAG 5 cut(s) 429, 1301, 1617, 1890, 1995
BstDSI CCRYGG 1 cut(s) 2215
BstEII GGTNACC 2 cut(s) 897, 1332
BstENI CCTNNNNNAGG 1 cut(s) 1813
BstKTI GATC 5 cut(s) 123, 298, 1129, 1570, 2197
BstMAI GTCTC 4 cut(s) 169, 174, 215, 234
BstMBI GATC 5 cut(s) 120, 295, 1126, 1567, 2194
BstMWI GCNNNNNNNGC 7 cut(s) 287, 917, 953, 962, 1597, 1647, 2207
BstNI CCWGG 3 cut(s) 395, 606, 1494
BstNSI RCATGY 1 cut(s) 1946
BstPI GGTNACC 2 cut(s) 897, 1332
BstSCI CCNGG 4 cut(s) 393, 604, 1466, 1492
BstSFI CTRYAG 2 cut(s) 628, 2203
BstV1I GCAGC 3 cut(s) 655, 1252, 2062
BstX2I RGATCY 2 cut(s) 120, 1567
BstYI RGATCY 2 cut(s) 120, 1567
Bsu15I ATCGAT 1 cut(s) 1137
Bsu36I CCTNAGG 2 cut(s) 1890, 1995
BsuRI GGCC 7 cut(s) 554, 766, 1206, 1347, 1542, 1600, 2291
BsuTUI ATCGAT 1 cut(s) 1137
BtgI CCRYGG 1 cut(s) 2215
BtsI GCAGTG 1 cut(s) 1179
BtsIMutI CAGTG 5 cut(s) 637, 648, 1179, 1924, 2029
BveI ACCTGC 1 cut(s) 970
Cac8I GCNNGC 5 cut(s) 292, 1270, 1652, 2212, 2293
CciI TCATGA 2 cut(s) 730, 1504
Cfr13I GGNCC 7 cut(s) 471, 725, 765, 780, 1204, 1632, 2121
ClaI ATCGAT 1 cut(s) 1137
CseI GACGC 1 cut(s) 747
Csp6I GTAC 8 cut(s) 143, 390, 439, 1045, 1092, 1162, 1858, 2310
CviQI GTAC 8 cut(s) 143, 390, 439, 1045, 1092, 1162, 1858, 2310
DdeI CTNAG 5 cut(s) 429, 1301, 1617, 1890, 1995
DpnI GATC 5 cut(s) 122, 297, 1128, 1569, 2196
DpnII GATC 5 cut(s) 120, 295, 1126, 1567, 2194
DraIII CACNNNGTG 1 cut(s) 304
EaeI YGGCCR 2 cut(s) 552, 1540
Eam1104I CTCTTC 3 cut(s) 784, 1577, 2130
EarI CTCTTC 3 cut(s) 784, 1577, 2130
EciI GGCGGA 1 cut(s) 2266
Ecl136II GAGCTC 3 cut(s) 433, 1156, 1977
Eco130I CCWWGG 5 cut(s) 570, 1200, 1595, 2094, 2215
Eco147I AGGCCT 1 cut(s) 2291
Eco24I GRGCYC 4 cut(s) 435, 1158, 1874, 1979
Eco32I GATATC 1 cut(s) 514
Eco47I GGWCC 5 cut(s) 471, 725, 780, 1632, 2121
Eco53kI GAGCTC 3 cut(s) 433, 1156, 1977
Eco57I CTGAAG 3 cut(s) 874, 1323, 1397
Eco81I CCTNAGG 2 cut(s) 1890, 1995
Eco88I CYCGRG 1 cut(s) 1451
Eco91I GGTNACC 2 cut(s) 897, 1332
EcoICRI GAGCTC 3 cut(s) 433, 1156, 1977
EcoNI CCTNNNNNAGG 1 cut(s) 1813
EcoO109I RGGNCCY 1 cut(s) 725
EcoO65I GGTNACC 2 cut(s) 897, 1332
EcoRI GAATTC 1 cut(s) 445
EcoRII CCWGG 3 cut(s) 393, 604, 1492
EcoRV GATATC 1 cut(s) 514
EcoT14I CCWWGG 5 cut(s) 570, 1200, 1595, 2094, 2215
EcoT38I GRGCYC 4 cut(s) 435, 1158, 1874, 1979
ErhI CCWWGG 5 cut(s) 570, 1200, 1595, 2094, 2215
Esp3I CGTCTC 1 cut(s) 174
FalI AAGNNNNNCTT 4 cut(s) 110, 142, 1556, 1588
FaqI GGGAC 5 cut(s) 89, 457, 496, 1327, 1510
FauI CCCGC 3 cut(s) 51, 1251, 1882
Fnu4HI GCNGC 3 cut(s) 669, 1266, 2051
FriOI GRGCYC 4 cut(s) 435, 1158, 1874, 1979
Fsp4HI GCNGC 3 cut(s) 669, 1266, 2051
FspBI CTAG 1 cut(s) 1023
GluI GCNGC 3 cut(s) 669, 1266, 2051
GsaI CCCAGC 1 cut(s) 2088
HaeIII GGCC 7 cut(s) 554, 766, 1206, 1347, 1542, 1600, 2291
HapII CCGG 2 cut(s) 783, 1467
HgaI GACGC 1 cut(s) 747
Hin1I GRCGYC 1 cut(s) 758
HincII GTYRAC 1 cut(s) 1084
HindII GTYRAC 1 cut(s) 1084
HindIII AAGCTT 2 cut(s) 463, 1016
HinfI GANTC 5 cut(s) 81, 263, 913, 935, 1297
HpaII CCGG 2 cut(s) 783, 1467
Hpy166II GTNNAC 3 cut(s) 198, 439, 1084
Hpy188I TCNGA 7 cut(s) 9, 222, 268, 934, 1227, 1304, 1416
Hpy8I GTNNAC 3 cut(s) 198, 439, 1084
HpyAV CCTTC 4 cut(s) 271, 1347, 1558, 2281
HpyCH4III ACNGT 4 cut(s) 632, 871, 1420, 2106
HpyCH4V TGCA 8 cut(s) 328, 415, 565, 740, 1038, 1361, 1654, 2050
HpyF10VI GCNNNNNNNGC 7 cut(s) 287, 917, 953, 962, 1597, 1647, 2207
HpyF3I CTNAG 5 cut(s) 429, 1301, 1617, 1890, 1995
Hsp92I GRCGYC 1 cut(s) 758
KpnI GGTACC 1 cut(s) 393
Kzo9I GATC 5 cut(s) 120, 295, 1126, 1567, 2194
LmnI GCTCC 5 cut(s) 287, 1153, 1161, 1982, 2300
Lsp1109I GCAGC 3 cut(s) 655, 1252, 2062
LweI GCATC 6 cut(s) 574, 898, 934, 1143, 1252, 1795
MaeI CTAG 1 cut(s) 1023
MaeIII GTNAC 7 cut(s) 182, 454, 897, 1177, 1332, 1612, 2024
MalI GATC 5 cut(s) 122, 297, 1128, 1569, 2196
MboI GATC 5 cut(s) 120, 295, 1126, 1567, 2194
MfeI CAATTG 2 cut(s) 21, 237
MflI RGATCY 2 cut(s) 120, 1567
MhlI GDGCHC 4 cut(s) 435, 1158, 1874, 1979
MlsI TGGCCA 2 cut(s) 554, 1542
MluNI TGGCCA 2 cut(s) 554, 1542
MlyI GAGTC 2 cut(s) 75, 257
Mox20I TGGCCA 2 cut(s) 554, 1542
MroXI GAANNNNTTC 3 cut(s) 311, 449, 1788
MscI TGGCCA 2 cut(s) 554, 1542
MseI TTAA 5 cut(s) 501, 1122, 1521, 1959, 2144
Msp20I TGGCCA 2 cut(s) 554, 1542
MspI CCGG 2 cut(s) 783, 1467
MspR9I CCNGG 4 cut(s) 395, 606, 1468, 1494
MunI CAATTG 2 cut(s) 21, 237
Mva1269I GAATGC 1 cut(s) 1654
MvaI CCWGG 3 cut(s) 395, 606, 1494
MwoI GCNNNNNNNGC 7 cut(s) 287, 917, 953, 962, 1597, 1647, 2207
NciI CCSGG 1 cut(s) 1468
NcoI CCATGG 1 cut(s) 2215
NdeII GATC 5 cut(s) 120, 295, 1126, 1567, 2194
NlaIV GGNNCC 9 cut(s) 391, 473, 532, 955, 1197, 1375, 1460, 1633, 2108
NmeAIII GCCGAG 1 cut(s) 1539
NmuCI GTSAC 6 cut(s) 454, 897, 1177, 1332, 1612, 2024
NspI RCATGY 1 cut(s) 1946
PaeR7I CTCGAG 1 cut(s) 1451
PagI TCATGA 2 cut(s) 730, 1504
PceI AGGCCT 1 cut(s) 2291
PctI GAATGC 1 cut(s) 1654
PdmI GAANNNNTTC 3 cut(s) 311, 449, 1788
PfeI GAWTC 3 cut(s) 913, 935, 1297
PflFI GACNNNGTC 1 cut(s) 1175
PflMI CCANNNNNTGG 1 cut(s) 2084
PkrI GCNGC 3 cut(s) 670, 1267, 2052
PleI GAGTC 2 cut(s) 75, 257
PpsI GAGTC 2 cut(s) 75, 257
PpuMI RGGWCCY 1 cut(s) 725
PsiI TTATAA 1 cut(s) 2157
Psp124BI GAGCTC 3 cut(s) 435, 1158, 1979
Psp5II RGGWCCY 1 cut(s) 725
Psp6I CCWGG 3 cut(s) 393, 604, 1492
PspEI GGTNACC 2 cut(s) 897, 1332
PspFI CCCAGC 1 cut(s) 2084
PspGI CCWGG 3 cut(s) 393, 604, 1492
PspN4I GGNNCC 9 cut(s) 391, 473, 532, 955, 1197, 1375, 1460, 1633, 2108
PspPI GGNCC 7 cut(s) 471, 725, 765, 780, 1204, 1632, 2121
PspPPI RGGWCCY 1 cut(s) 725
PsrI GAACNNNNNNTAC 2 cut(s) 1946, 1978
PsuI RGATCY 2 cut(s) 120, 1567
PsyI GACNNNGTC 1 cut(s) 1175
RsaI GTAC 8 cut(s) 144, 391, 440, 1046, 1093, 1163, 1859, 2311
RsaNI GTAC 8 cut(s) 143, 390, 439, 1045, 1092, 1162, 1858, 2310
SacI GAGCTC 3 cut(s) 435, 1158, 1979
SaqAI TTAA 5 cut(s) 501, 1122, 1521, 1959, 2144
SatI GCNGC 3 cut(s) 669, 1266, 2051
Sau3AI GATC 5 cut(s) 120, 295, 1126, 1567, 2194
Sau96I GGNCC 7 cut(s) 471, 725, 765, 780, 1204, 1632, 2121
SchI GAGTC 2 cut(s) 75, 257
ScrFI CCNGG 4 cut(s) 395, 606, 1468, 1494
SduI GDGCHC 4 cut(s) 435, 1158, 1874, 1979
SfaNI GCATC 6 cut(s) 574, 898, 934, 1143, 1252, 1795
SfcI CTRYAG 2 cut(s) 628, 2203
Sfr274I CTCGAG 1 cut(s) 1451
SinI GGWCC 5 cut(s) 471, 725, 780, 1632, 2121
SlaI CTCGAG 1 cut(s) 1451
SmlI CTYRAG 2 cut(s) 1451, 1853
SmoI CTYRAG 2 cut(s) 1451, 1853
SseBI AGGCCT 1 cut(s) 2291
SsiI CCGC 4 cut(s) 44, 1258, 1875, 2251
SspI AATATT 1 cut(s) 139
SspMI CTAG 1 cut(s) 1023
SstI GAGCTC 3 cut(s) 435, 1158, 1979
StuI AGGCCT 1 cut(s) 2291
StyD4I CCNGG 4 cut(s) 393, 604, 1466, 1492
StyI CCWWGG 5 cut(s) 570, 1200, 1595, 2094, 2215
TaaI ACNGT 4 cut(s) 632, 871, 1420, 2106
TaqI TCGA 4 cut(s) 1129, 1137, 1452, 1973
TaqII GACCGA 1 cut(s) 473
TatI WGTACW 3 cut(s) 438, 1044, 1091
TfiI GAWTC 3 cut(s) 913, 935, 1297
Tru1I TTAA 5 cut(s) 501, 1122, 1521, 1959, 2144
Tru9I TTAA 5 cut(s) 501, 1122, 1521, 1959, 2144
TscAI CASTG 5 cut(s) 637, 655, 1186, 1924, 2029
TseFI GTSAC 6 cut(s) 454, 897, 1177, 1332, 1612, 2024
TseI GCWGC 3 cut(s) 668, 1265, 2050
Tsp45I GTSAC 6 cut(s) 454, 897, 1177, 1332, 1612, 2024
TspDTI ATGAA 6 cut(s) 88, 1091, 1248, 1275, 1575, 1967
TspRI CASTG 5 cut(s) 637, 655, 1186, 1924, 2029
Tth111I GACNNNGTC 1 cut(s) 1175
Van91I CCANNNNNTGG 1 cut(s) 2084
VpaK11BI GGWCC 5 cut(s) 471, 725, 780, 1632, 2121
XagI CCTNNNNNAGG 1 cut(s) 1813
XapI RAATTY 6 cut(s) 309, 445, 1146, 1384, 1391, 2254
XceI RCATGY 1 cut(s) 1946
XcmI CCANNNNNNNNNTGG 2 cut(s) 964, 1384
XhoI CTCGAG 1 cut(s) 1451
XmnI GAANNNNTTC 3 cut(s) 311, 449, 1788
XspI CTAG 1 cut(s) 1023
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.