Rmu_ssc0000396.1_g000008

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000396.1
OG0019002
Physical Location & Seq
Reverse (-)
56841 .. 63541
6701 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000396.1_g000008.1.cds

Sequence Viewer

Length: 2382 bp
atgtttctgatgcctaacccaattgatgacatcatcatcctcccgccacatgaccatccatgcttatcattatggcacagacttctgaacttgaacttcattatccaaaacataaacaagatcttcttcacaagtaatattgtaccagaaatcccttcctctatctcgtctctctcattttgtaacatccagaagtccactcctctctgtctcgtctttctgattttgtctctgtcaattgtagcgagaaacatttttcaggactctgaaatggtgaaggcacaaggagcgagcgatcacctcgtgaaaattttccctgaaaatatgcaggacattccacaggatgagaactccaaagatcagtttctaattcaatccaagtcagggggtacccaggttttatggaataatgtgcagaaattgaaatctgagcccgtgtacaagaattctttcgtgaccgaaagcttatggtcccctttagggacttatttggcaaatgttaagaaacaggatatcattctttttagaggcacctctgccttacatcatgtggccacctgtctgcatcccaaggtttttgaggtgaaatgggttgatttttcgcctggtgagaattatttggtgtcctacagtgttgaacaaaaaaacactggtgaaataaccagagctgcaataagcatttttgatgtgaaaactggaaaagttgtgaaaaaaattgtgggaggtcctcatgattttgcaaataaaggagttggggcgtcttggcccattttcaaatggtccggtggaagagatgacaagtattttgccctaatcagccagaatgttatctctatttatgagataaatacatttacagccatattgacggtagggaatgtcatggacttcagttggtcaccaactgatgcgattcttgctctctttgtatcagaatcggttgatgctggtggtgccatacctgctttggtgaaactggttcaaatacctagtaaagagcagttgattgagaagaagctttctagtgttagtaagtgcaagatgtactggcaaagcaatggggagtatcttgctatgaaagttgacagcagtacaaacaatttcgttgagcttttccaaattaaagatcgaggcatcgataataaaattttggcgctcccgtataataaggacaaggtcactgcttttgcttgggaacccatgggccataggtttgctattattcagagtaatgaagatattagtttctactccatgcgggatgctaccagcacaggctgtgtttcattgctcacgattctcagaagcaaggggacaaactatctcttttggtcaccttctggtggcctcataatacttgcaaggttgaatggttccaatgggaatttggaatttttcaatgtggatgaacttcggacagttgctatatctaaacatatagcaacggctcttgagtggaacccaaccgggagatatgttgctacttctactcctgggacttgtcatgagaagccgagttttaacatttggtcttttgatggccacctactctaccaattacagaaggatctcttcacaaagttttcatggcgaccaaggccactcaacatggcgactaaggctattatggggtccatgagccataacagcttgcattcactcaacatggaagatgatgagtattcactcaacatggaagatgatgagtattcactcaacatggaagatgatgagtattcactcaacatggaagatgatgagtattcactcaacatggaagatgatgataattccatgagtttgactgggggtatcaagaagtctgtggctttcatggaaaagtttcacgaagatttggatgccttttataggctggatgatgaggaaaggcagttattgatagacctcaagtacctcactttgagccccgcttctcaaaaacctaaggagaaagatgtagtcatagttatcagtgatgatgaggaggaggaaaagcatgtattgatgaaccttaaataccttgcttcgagctccacttctaaaaaacctgagggggcagatgtagtcataggtatcagtgacgaggaggaaaagatggctttgcagccatcttctccaaagaaaacacttccaatggctgggcaaaccaaggaaagacggttccatagaaaatggaccaaagaagaagaagaggctttaaggcatggttataaaaagtataaaacaaattggaaattgattttgggtgatccagcctacaaagcttgccatggcagaactaatgttgatttgaaagacaaatggcggaatttgatgagggctgatgacagggctaaggcgaaggcctgctactcattaccaaatggaattgatggtacgtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005852 GO:0032991 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
ko03013 map03013
Pfam Domains
Protein Families
RRM_1 eIF2A

Protein Analysis

793

Amino Acids

89.73

Weight (kDa)

5.82

Isoelectric Point (pI)

40.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0019002)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr4g0447321
rosa_laevigata RLG00000026012
rosa_multiflora Rmu_ssc0000396.1_g000008
rosa_roxburghii Rroxscaffold_5G00387700
rosa_samantha Rh4AG441000 Rh4BG450300 Rh4CG467400 Rh4DG448700
rosa_wichuraiana Rw4G037750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2211
Acc36I ACCTGC 1 cut(s) 970
Acc65I GGTACC 1 cut(s) 389
AccB1I GGYRCC 3 cut(s) 389, 530, 953
AccB7I CCANNNNNTGG 1 cut(s) 2138
AciI CCGC 4 cut(s) 44, 1258, 1929, 2305
AclWI GGATC 2 cut(s) 1575, 2243
AcoI YGGCCR 2 cut(s) 552, 1540
AcsI RAATTY 6 cut(s) 309, 445, 1146, 1384, 1391, 2308
AcuI CTGAAG 1 cut(s) 874
AcyI GRCGYC 1 cut(s) 758
AdeI CACNNNGTG 1 cut(s) 304
AfaI GTAC 7 cut(s) 144, 391, 440, 1046, 1093, 1913, 2377
AfiI CCNNNNNNNGG 5 cut(s) 384, 480, 1343, 1869, 2138
AgsI TTSAA 9 cut(s) 94, 374, 424, 638, 775, 983, 1369, 1399, 2293
AjnI CCWGG 3 cut(s) 393, 604, 1492
AjuI GAANNNNNNNTTGG 2 cut(s) 2225, 2257
AloI GAACNNNNNNTCC 2 cut(s) 2144, 2176
AluBI AGCT 7 cut(s) 465, 668, 1018, 1111, 1650, 2031, 2264
AluI AGCT 7 cut(s) 465, 668, 1018, 1111, 1650, 2031, 2264
Alw21I GWGCWC 1 cut(s) 2033
Alw26I GTCTC 3 cut(s) 174, 215, 234
AlwI GGATC 2 cut(s) 1575, 2243
AoxI GGCC 7 cut(s) 552, 764, 1204, 1345, 1540, 1598, 2343
ApeKI GCWGC 2 cut(s) 668, 2104
ApoI RAATTY 6 cut(s) 309, 445, 1146, 1384, 1391, 2308
ArsI GACNNNNNNTTYG 2 cut(s) 788, 820
Asp700I GAANNNNTTC 3 cut(s) 311, 449, 1842
Asp718I GGTACC 1 cut(s) 389
AspLEI GCGC 1 cut(s) 1156
AspS9I GGNCC 7 cut(s) 471, 725, 765, 780, 1204, 1632, 2175
AsuC2I CCSGG 1 cut(s) 1468
AsuHPI GGTGA 9 cut(s) 286, 290, 595, 620, 665, 891, 982, 1326, 2258
AvaII GGWCC 5 cut(s) 471, 725, 780, 1632, 2175
AxyI CCTNAGG 2 cut(s) 1944, 2049
BaeI ACNNNNGTAYC 2 cut(s) 381, 414
BalI TGGCCA 2 cut(s) 554, 1542
BanI GGYRCC 3 cut(s) 389, 530, 953
BanII GRGCYC 3 cut(s) 435, 1928, 2033
BarI GAAGNNNNNNTAC 2 cut(s) 2333, 2365
BauI CACGAG 1 cut(s) 302
Bbv12I GWGCWC 1 cut(s) 2033
BbvI GCAGC 2 cut(s) 655, 2116
BccI CCATC 5 cut(s) 63, 1532, 2089, 2116, 2366
BceAI ACGGC 1 cut(s) 1461
BciT130I CCWGG 3 cut(s) 395, 606, 1494
BcnI CCSGG 1 cut(s) 1468
BcoDI GTCTC 3 cut(s) 174, 215, 234
BfaI CTAG 2 cut(s) 990, 1023
BfmI CTRYAG 1 cut(s) 628
BfoI RGCGCY 1 cut(s) 1157
BfuAI ACCTGC 1 cut(s) 970
BglII AGATCT 1 cut(s) 120
BisI GCNGC 2 cut(s) 669, 2105
BlsI GCNGC 2 cut(s) 670, 2106
Bme1390I CCNGG 4 cut(s) 395, 606, 1468, 1494
Bme18I GGWCC 5 cut(s) 471, 725, 780, 1632, 2175
BmgT120I GGNCC 7 cut(s) 471, 725, 765, 780, 1204, 1632, 2175
BmiI GGNNCC 9 cut(s) 391, 473, 532, 955, 1197, 1375, 1460, 1633, 2162
BmrFI CCNGG 4 cut(s) 395, 606, 1468, 1494
BmrI ACTGGG 1 cut(s) 1815
BmsI GCATC 6 cut(s) 574, 898, 934, 1143, 1252, 1849
BmuI ACTGGG 1 cut(s) 1815
Bpu10I CCTNAGC 1 cut(s) 2334
BpuEI CTTGAG 2 cut(s) 1472, 1892
BpuMI CCSGG 1 cut(s) 1468
Bsa29I ATCGAT 1 cut(s) 1137
BsaAI YACGTR 1 cut(s) 2379
BsaHI GRCGYC 1 cut(s) 758
BsaJI CCNNGG 7 cut(s) 393, 570, 1200, 1493, 1595, 2148, 2269
BsaWI WCCGGW 1 cut(s) 782
BsaXI ACNNNNNCTCC 2 cut(s) 1474, 1504
Bsc4I CCNNNNNNNGG 5 cut(s) 384, 480, 1343, 1869, 2138
Bse1I ACTGG 5 cut(s) 655, 700, 981, 1052, 1810
Bse21I CCTNAGG 2 cut(s) 1944, 2049
Bse3DI GCAATG 2 cut(s) 1063, 1286
BseBI CCWGG 3 cut(s) 395, 606, 1494
BseCI ATCGAT 1 cut(s) 1137
BseDI CCNNGG 7 cut(s) 393, 570, 1200, 1493, 1595, 2148, 2269
BseGI GGATG 9 cut(s) 36, 55, 186, 349, 565, 1267, 1411, 1864, 1882
BseLI CCNNNNNNNGG 5 cut(s) 384, 480, 1343, 1869, 2138
BseMI GCAATG 2 cut(s) 1063, 1286
BseMII CTCAG 3 cut(s) 420, 1315, 2040
BseNI ACTGG 5 cut(s) 655, 700, 981, 1052, 1810
BseRI GAGGAG 4 cut(s) 192, 1997, 2000, 2099
BseXI GCAGC 2 cut(s) 655, 2116
BseYI CCCAGC 1 cut(s) 2138
BsgI GTGCAG 1 cut(s) 434
BshFI GGCC 7 cut(s) 554, 766, 1206, 1347, 1542, 1600, 2345
BshNI GGYRCC 3 cut(s) 389, 530, 953
BshVI ATCGAT 1 cut(s) 1137
BsiHKAI GWGCWC 1 cut(s) 2033
BsiSI CCGG 2 cut(s) 783, 1467
BslFI GGGAC 4 cut(s) 457, 496, 1327, 1510
BslI CCNNNNNNNGG 5 cut(s) 384, 480, 1343, 1869, 2138
BsmAI GTCTC 3 cut(s) 174, 215, 234
BsmBI CGTCTC 1 cut(s) 174
BsmFI GGGAC 4 cut(s) 457, 496, 1327, 1510
BsmI GAATGC 1 cut(s) 1654
BsnI GGCC 7 cut(s) 554, 766, 1206, 1347, 1542, 1600, 2345
Bsp1286I GDGCHC 3 cut(s) 435, 1928, 2033
Bsp1407I TGTACA 1 cut(s) 438
Bsp143I GATC 6 cut(s) 120, 295, 358, 1126, 1567, 2248
Bsp19I CCATGG 2 cut(s) 1200, 2269
BspACI CCGC 4 cut(s) 44, 1258, 1929, 2305
BspANI GGCC 7 cut(s) 554, 766, 1206, 1347, 1542, 1600, 2345
BspCNI CTCAG 3 cut(s) 421, 1314, 2041
BspDI ATCGAT 1 cut(s) 1137
BspHI TCATGA 2 cut(s) 730, 1504
BspLI GGNNCC 9 cut(s) 391, 473, 532, 955, 1197, 1375, 1460, 1633, 2162
BspMI ACCTGC 1 cut(s) 970
BspPI GGATC 2 cut(s) 1575, 2243
BspT107I GGYRCC 3 cut(s) 389, 530, 953
BsrDI GCAATG 2 cut(s) 1063, 1286
BsrGI TGTACA 1 cut(s) 438
BsrI ACTGG 5 cut(s) 655, 700, 981, 1052, 1810
BssECI CCNNGG 7 cut(s) 393, 570, 1200, 1493, 1595, 2148, 2269
BssMI GATC 6 cut(s) 120, 295, 358, 1126, 1567, 2248
BssNI GRCGYC 1 cut(s) 758
BssSI CACGAG 1 cut(s) 302
BssT1I CCWWGG 5 cut(s) 570, 1200, 1595, 2148, 2269
Bst2BI CACGAG 1 cut(s) 302
Bst2UI CCWGG 3 cut(s) 395, 606, 1494
Bst4CI ACNGT 4 cut(s) 632, 871, 1420, 2160
Bst6I CTCTTC 3 cut(s) 784, 1577, 2184
BstACI GRCGYC 1 cut(s) 758
BstAUI TGTACA 1 cut(s) 438
BstBAI YACGTR 1 cut(s) 2379
BstC8I GCNNGC 4 cut(s) 292, 1652, 2266, 2347
BstDEI CTNAG 6 cut(s) 429, 1301, 1617, 1944, 2049, 2334
BstDSI CCRYGG 2 cut(s) 1200, 2269
BstEII GGTNACC 2 cut(s) 897, 1332
BstENI CCTNNNNNAGG 1 cut(s) 1867
BstF5I GGATG 9 cut(s) 36, 55, 186, 349, 565, 1267, 1411, 1864, 1882
BstH2I RGCGCY 1 cut(s) 1157
BstHHI GCGC 1 cut(s) 1156
BstKTI GATC 6 cut(s) 123, 298, 361, 1129, 1570, 2251
BstMAI GTCTC 3 cut(s) 174, 215, 234
BstMBI GATC 6 cut(s) 120, 295, 358, 1126, 1567, 2248
BstMWI GCNNNNNNNGC 8 cut(s) 287, 917, 953, 962, 1597, 1619, 1647, 2261
BstNI CCWGG 3 cut(s) 395, 606, 1494
BstNSI RCATGY 1 cut(s) 2000
BstPI GGTNACC 2 cut(s) 897, 1332
BstSCI CCNGG 4 cut(s) 393, 604, 1466, 1492
BstSFI CTRYAG 1 cut(s) 628
BstV1I GCAGC 2 cut(s) 655, 2116
BstX2I RGATCY 2 cut(s) 120, 1567
BstYI RGATCY 2 cut(s) 120, 1567
Bsu15I ATCGAT 1 cut(s) 1137
Bsu36I CCTNAGG 2 cut(s) 1944, 2049
BsuRI GGCC 7 cut(s) 554, 766, 1206, 1347, 1542, 1600, 2345
BsuTUI ATCGAT 1 cut(s) 1137
BtgI CCRYGG 2 cut(s) 1200, 2269
BtsCI GGATG 9 cut(s) 36, 55, 186, 349, 565, 1267, 1411, 1864, 1882
BtsI GCAGTG 1 cut(s) 1179
BtsIMutI CAGTG 5 cut(s) 637, 648, 1179, 1978, 2083
BveI ACCTGC 1 cut(s) 970
Cac8I GCNNGC 4 cut(s) 292, 1652, 2266, 2347
CciI TCATGA 2 cut(s) 730, 1504
CfoI GCGC 1 cut(s) 1156
Cfr13I GGNCC 7 cut(s) 471, 725, 765, 780, 1204, 1632, 2175
ClaI ATCGAT 1 cut(s) 1137
CseI GACGC 1 cut(s) 747
Csp6I GTAC 7 cut(s) 143, 390, 439, 1045, 1092, 1912, 2376
CviQI GTAC 7 cut(s) 143, 390, 439, 1045, 1092, 1912, 2376
DdeI CTNAG 6 cut(s) 429, 1301, 1617, 1944, 2049, 2334
DpnI GATC 6 cut(s) 122, 297, 360, 1128, 1569, 2250
DpnII GATC 6 cut(s) 120, 295, 358, 1126, 1567, 2248
DraIII CACNNNGTG 1 cut(s) 304
EaeI YGGCCR 2 cut(s) 552, 1540
Eam1104I CTCTTC 3 cut(s) 784, 1577, 2184
EarI CTCTTC 3 cut(s) 784, 1577, 2184
EciI GGCGGA 1 cut(s) 2320
Ecl136II GAGCTC 1 cut(s) 2031
Eco130I CCWWGG 5 cut(s) 570, 1200, 1595, 2148, 2269
Eco147I AGGCCT 1 cut(s) 2345
Eco24I GRGCYC 3 cut(s) 435, 1928, 2033
Eco32I GATATC 1 cut(s) 514
Eco47I GGWCC 5 cut(s) 471, 725, 780, 1632, 2175
Eco53kI GAGCTC 1 cut(s) 2031
Eco57I CTGAAG 1 cut(s) 874
Eco81I CCTNAGG 2 cut(s) 1944, 2049
Eco91I GGTNACC 2 cut(s) 897, 1332
EcoICRI GAGCTC 1 cut(s) 2031
EcoNI CCTNNNNNAGG 1 cut(s) 1867
EcoO109I RGGNCCY 1 cut(s) 725
EcoO65I GGTNACC 2 cut(s) 897, 1332
EcoRI GAATTC 1 cut(s) 445
EcoRII CCWGG 3 cut(s) 393, 604, 1492
EcoRV GATATC 1 cut(s) 514
EcoT14I CCWWGG 5 cut(s) 570, 1200, 1595, 2148, 2269
EcoT38I GRGCYC 3 cut(s) 435, 1928, 2033
ErhI CCWWGG 5 cut(s) 570, 1200, 1595, 2148, 2269
Esp3I CGTCTC 1 cut(s) 174
FalI AAGNNNNNCTT 4 cut(s) 110, 142, 1556, 1588
FaqI GGGAC 4 cut(s) 457, 496, 1327, 1510
FauI CCCGC 3 cut(s) 51, 1251, 1936
Fnu4HI GCNGC 2 cut(s) 669, 2105
FokI GGATG 9 cut(s) 23, 42, 173, 356, 552, 1274, 1418, 1871, 1889
FriOI GRGCYC 3 cut(s) 435, 1928, 2033
Fsp4HI GCNGC 2 cut(s) 669, 2105
FspBI CTAG 2 cut(s) 990, 1023
GlaI GCGC 1 cut(s) 1155
GluI GCNGC 2 cut(s) 669, 2105
GsaI CCCAGC 1 cut(s) 2142
HaeII RGCGCY 1 cut(s) 1157
HaeIII GGCC 7 cut(s) 554, 766, 1206, 1347, 1542, 1600, 2345
HapII CCGG 2 cut(s) 783, 1467
HgaI GACGC 1 cut(s) 747
HhaI GCGC 1 cut(s) 1156
Hin1I GRCGYC 1 cut(s) 758
Hin6I GCGC 1 cut(s) 1154
HinP1I GCGC 1 cut(s) 1154
HincII GTYRAC 1 cut(s) 1084
HindII GTYRAC 1 cut(s) 1084
HindIII AAGCTT 3 cut(s) 463, 1016, 2262
HinfI GANTC 4 cut(s) 263, 913, 935, 1297
HpaII CCGG 2 cut(s) 783, 1467
HphI GGTGA 9 cut(s) 286, 290, 595, 620, 665, 891, 982, 1326, 2258
Hpy166II GTNNAC 3 cut(s) 198, 439, 1084
Hpy188I TCNGA 9 cut(s) 9, 87, 222, 268, 430, 934, 1227, 1304, 1416
Hpy8I GTNNAC 3 cut(s) 198, 439, 1084
HpyAV CCTTC 5 cut(s) 165, 271, 1347, 1558, 2335
HpyCH4III ACNGT 4 cut(s) 632, 871, 1420, 2160
HpyCH4IV ACGT 1 cut(s) 2378
HpyCH4V TGCA 9 cut(s) 328, 415, 565, 671, 740, 1038, 1361, 1654, 2104
HpyF10VI GCNNNNNNNGC 8 cut(s) 287, 917, 953, 962, 1597, 1619, 1647, 2261
HpyF3I CTNAG 6 cut(s) 429, 1301, 1617, 1944, 2049, 2334
HpySE526I ACGT 1 cut(s) 2378
Hsp92I GRCGYC 1 cut(s) 758
HspAI GCGC 1 cut(s) 1154
KpnI GGTACC 1 cut(s) 393
Kzo9I GATC 6 cut(s) 120, 295, 358, 1126, 1567, 2248
LmnI GCTCC 3 cut(s) 287, 1161, 2036
Lsp1109I GCAGC 2 cut(s) 655, 2116
LweI GCATC 6 cut(s) 574, 898, 934, 1143, 1252, 1849
MaeI CTAG 2 cut(s) 990, 1023
MaeII ACGT 1 cut(s) 2378
MaeIII GTNAC 6 cut(s) 182, 454, 897, 1177, 1332, 2078
MalI GATC 6 cut(s) 122, 297, 360, 1128, 1569, 2250
MboI GATC 6 cut(s) 120, 295, 358, 1126, 1567, 2248
MfeI CAATTG 2 cut(s) 21, 237
MflI RGATCY 2 cut(s) 120, 1567
MhlI GDGCHC 3 cut(s) 435, 1928, 2033
MlsI TGGCCA 2 cut(s) 554, 1542
MluNI TGGCCA 2 cut(s) 554, 1542
MlyI GAGTC 1 cut(s) 257
Mox20I TGGCCA 2 cut(s) 554, 1542
MroXI GAANNNNTTC 3 cut(s) 311, 449, 1842
MscI TGGCCA 2 cut(s) 554, 1542
MseI TTAA 5 cut(s) 501, 1122, 1521, 2013, 2198
Msp20I TGGCCA 2 cut(s) 554, 1542
MspI CCGG 2 cut(s) 783, 1467
MspR9I CCNGG 4 cut(s) 395, 606, 1468, 1494
MunI CAATTG 2 cut(s) 21, 237
Mva1269I GAATGC 1 cut(s) 1654
MvaI CCWGG 3 cut(s) 395, 606, 1494
MwoI GCNNNNNNNGC 8 cut(s) 287, 917, 953, 962, 1597, 1619, 1647, 2261
NciI CCSGG 1 cut(s) 1468
NcoI CCATGG 2 cut(s) 1200, 2269
NdeII GATC 6 cut(s) 120, 295, 358, 1126, 1567, 2248
NlaIV GGNNCC 9 cut(s) 391, 473, 532, 955, 1197, 1375, 1460, 1633, 2162
NmeAIII GCCGAG 1 cut(s) 1539
NmuCI GTSAC 5 cut(s) 454, 897, 1177, 1332, 2078
NspI RCATGY 1 cut(s) 2000
PagI TCATGA 2 cut(s) 730, 1504
PceI AGGCCT 1 cut(s) 2345
PctI GAATGC 1 cut(s) 1654
PdmI GAANNNNTTC 3 cut(s) 311, 449, 1842
PfeI GAWTC 3 cut(s) 913, 935, 1297
PflFI GACNNNGTC 1 cut(s) 1175
PflMI CCANNNNNTGG 1 cut(s) 2138
PkrI GCNGC 2 cut(s) 670, 2106
PleI GAGTC 1 cut(s) 257
PpsI GAGTC 1 cut(s) 257
Ppu21I YACGTR 1 cut(s) 2379
PpuMI RGGWCCY 1 cut(s) 725
PsiI TTATAA 1 cut(s) 2211
Psp124BI GAGCTC 1 cut(s) 2033
Psp5II RGGWCCY 1 cut(s) 725
Psp6I CCWGG 3 cut(s) 393, 604, 1492
PspEI GGTNACC 2 cut(s) 897, 1332
PspFI CCCAGC 1 cut(s) 2138
PspGI CCWGG 3 cut(s) 393, 604, 1492
PspN4I GGNNCC 9 cut(s) 391, 473, 532, 955, 1197, 1375, 1460, 1633, 2162
PspPI GGNCC 7 cut(s) 471, 725, 765, 780, 1204, 1632, 2175
PspPPI RGGWCCY 1 cut(s) 725
PsrI GAACNNNNNNTAC 2 cut(s) 2000, 2032
PsuI RGATCY 2 cut(s) 120, 1567
PsyI GACNNNGTC 1 cut(s) 1175
RsaI GTAC 7 cut(s) 144, 391, 440, 1046, 1093, 1913, 2377
RsaNI GTAC 7 cut(s) 143, 390, 439, 1045, 1092, 1912, 2376
SacI GAGCTC 1 cut(s) 2033
SaqAI TTAA 5 cut(s) 501, 1122, 1521, 2013, 2198
SatI GCNGC 2 cut(s) 669, 2105
Sau3AI GATC 6 cut(s) 120, 295, 358, 1126, 1567, 2248
Sau96I GGNCC 7 cut(s) 471, 725, 765, 780, 1204, 1632, 2175
SchI GAGTC 1 cut(s) 257
ScrFI CCNGG 4 cut(s) 395, 606, 1468, 1494
SduI GDGCHC 3 cut(s) 435, 1928, 2033
SfaNI GCATC 6 cut(s) 574, 898, 934, 1143, 1252, 1849
SfcI CTRYAG 1 cut(s) 628
SinI GGWCC 5 cut(s) 471, 725, 780, 1632, 2175
SmlI CTYRAG 2 cut(s) 1451, 1907
SmoI CTYRAG 2 cut(s) 1451, 1907
SseBI AGGCCT 1 cut(s) 2345
SsiI CCGC 4 cut(s) 44, 1258, 1929, 2305
SspI AATATT 1 cut(s) 139
SspMI CTAG 2 cut(s) 990, 1023
SstI GAGCTC 1 cut(s) 2033
StuI AGGCCT 1 cut(s) 2345
StyD4I CCNGG 4 cut(s) 393, 604, 1466, 1492
StyI CCWWGG 5 cut(s) 570, 1200, 1595, 2148, 2269
TaaI ACNGT 4 cut(s) 632, 871, 1420, 2160
TaiI ACGT 1 cut(s) 2381
TaqI TCGA 3 cut(s) 1129, 1137, 2027
TaqII GACCGA 1 cut(s) 473
TatI WGTACW 3 cut(s) 438, 1044, 1091
TfiI GAWTC 3 cut(s) 913, 935, 1297
Tru1I TTAA 5 cut(s) 501, 1122, 1521, 2013, 2198
Tru9I TTAA 5 cut(s) 501, 1122, 1521, 2013, 2198
TscAI CASTG 5 cut(s) 637, 655, 1186, 1978, 2083
TseFI GTSAC 5 cut(s) 454, 897, 1177, 1332, 2078
TseI GCWGC 2 cut(s) 668, 2104
Tsp45I GTSAC 5 cut(s) 454, 897, 1177, 1332, 2078
TspDTI ATGAA 8 cut(s) 88, 1091, 1248, 1275, 1422, 1575, 1822, 2021
TspRI CASTG 5 cut(s) 637, 655, 1186, 1978, 2083
Tth111I GACNNNGTC 1 cut(s) 1175
Van91I CCANNNNNTGG 1 cut(s) 2138
VpaK11BI GGWCC 5 cut(s) 471, 725, 780, 1632, 2175
XagI CCTNNNNNAGG 1 cut(s) 1867
XapI RAATTY 6 cut(s) 309, 445, 1146, 1384, 1391, 2308
XceI RCATGY 1 cut(s) 2000
XcmI CCANNNNNNNNNTGG 2 cut(s) 964, 1384
XmnI GAANNNNTTC 3 cut(s) 311, 449, 1842
XspI CTAG 2 cut(s) 990, 1023
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.