Cytochrome b5-like Heme/Steroid binding domain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G24380 AT5G53550 AT5G53550 AT5G53550 AT5G53550 AT5G53550 AT5G53550 |
| fragaria_vesca | FvH4_7g32520 FvH4_7g32520 FvH4_7g32520 FvH4_7g32520 FvH4_7g32520 |
| malus_domestica | MD01G1225900.v1.1 MD07G1296400.v1.1 |
| prunus_persica | Prupe.2G316000_v2.0.a1 |
| pyrus_communis | pycom01g23440 pycom07g26920 |
| rosa_chinensis | RchiOBHm_Chr1g0382361 |
| rosa_laevigata | RLG00000026183 |
| rosa_multiflora | Rmu_sc0000110.1_g000042 Rmu_sc0006177.1_g000003 |
| rosa_roxburghii | Rroxscaffold_4G00278160 |
| rosa_rugosa | Rorug01G0433600 Rorug01G0433700 Rorug01G0433800 |
| rosa_samantha | Rh1AG458400 Rh1BG414700 Rh1CG428800 Rh1DG446800 |
| rosa_wichuraiana | Rw1G041260 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 610 |
| AccB1I | GGYRCC | 1 cut(s) | 2374 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 725 |
| AccI | GTMKAC | 1 cut(s) | 269 |
| AccIII | TCCGGA | 1 cut(s) | 2329 |
| AciI | CCGC | 4 cut(s) | 690, 1277, 2306, 2312 |
| AclWI | GGATC | 3 cut(s) | 140, 2033, 2264 |
| AcoI | YGGCCR | 3 cut(s) | 609, 1941, 2067 |
| AcsI | RAATTY | 2 cut(s) | 13, 745 |
| AcuI | CTGAAG | 2 cut(s) | 429, 2019 |
| AcvI | CACGTG | 1 cut(s) | 2053 |
| AdeI | CACNNNGTG | 1 cut(s) | 1965 |
| AfaI | GTAC | 7 cut(s) | 140, 641, 980, 1154, 2120, 2252, 2324 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 446, 725, 867, 1612, 1756, 2137 |
| AflIII | ACRYGT | 2 cut(s) | 1803, 2052 |
| AgsI | TTSAA | 7 cut(s) | 373, 733, 1065, 1438, 2060, 2207, 2277 |
| AjiI | CACGTC | 1 cut(s) | 1962 |
| AjnI | CCWGG | 3 cut(s) | 421, 1776, 2370 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2148, 2180 |
| Alw21I | GWGCWC | 2 cut(s) | 431, 840 |
| Alw26I | GTCTC | 1 cut(s) | 594 |
| AlwI | GGATC | 3 cut(s) | 140, 2033, 2264 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 160, 2371 |
| Ama87I | CYCGRG | 2 cut(s) | 102, 547 |
| Aor13HI | TCCGGA | 1 cut(s) | 2329 |
| ApeKI | GCWGC | 5 cut(s) | 203, 244, 1337, 1697, 2228 |
| ApoI | RAATTY | 2 cut(s) | 13, 745 |
| AseI | ATTAAT | 1 cut(s) | 576 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 749, 888 |
| AspS9I | GGNCC | 5 cut(s) | 831, 858, 871, 1042, 1444 |
| AsuC2I | CCSGG | 1 cut(s) | 2151 |
| AsuNHI | GCTAGC | 2 cut(s) | 391, 1333 |
| AvaI | CYCGRG | 2 cut(s) | 102, 547 |
| AvaII | GGWCC | 1 cut(s) | 1042 |
| BaeGI | GKGCMC | 1 cut(s) | 2379 |
| BalI | TGGCCA | 3 cut(s) | 611, 1943, 2069 |
| BanI | GGYRCC | 1 cut(s) | 2374 |
| BbrPI | CACGTG | 1 cut(s) | 2053 |
| BbsI | GAAGAC | 4 cut(s) | 236, 386, 1102, 1445 |
| Bbv12I | GWGCWC | 2 cut(s) | 431, 840 |
| BbvCI | CCTCAGC | 1 cut(s) | 1203 |
| BbvI | GCAGC | 5 cut(s) | 190, 231, 1324, 1709, 2215 |
| BceAI | ACGGC | 3 cut(s) | 320, 818, 1676 |
| BciT130I | CCWGG | 3 cut(s) | 423, 1778, 2372 |
| BclI | TGATCA | 3 cut(s) | 1392, 2143, 2352 |
| BcnI | CCSGG | 1 cut(s) | 2151 |
| BcoDI | GTCTC | 1 cut(s) | 594 |
| BfaI | CTAG | 5 cut(s) | 392, 477, 539, 965, 1334 |
| BfmI | CTRYAG | 1 cut(s) | 1875 |
| BfuAI | ACCTGC | 1 cut(s) | 610 |
| BglII | AGATCT | 1 cut(s) | 1714 |
| BisI | GCNGC | 5 cut(s) | 204, 245, 1338, 1698, 2229 |
| BlsI | GCNGC | 5 cut(s) | 205, 246, 1339, 1699, 2230 |
| BmcAI | AGTACT | 2 cut(s) | 641, 2252 |
| Bme1390I | CCNGG | 4 cut(s) | 423, 1778, 2151, 2372 |
| Bme18I | GGWCC | 1 cut(s) | 1042 |
| BmeT110I | CYCGRG | 2 cut(s) | 102, 547 |
| BmgBI | CACGTC | 1 cut(s) | 1962 |
| BmgT120I | GGNCC | 5 cut(s) | 831, 858, 871, 1042, 1444 |
| BmiI | GGNNCC | 8 cut(s) | 438, 504, 584, 832, 872, 1565, 1872, 2376 |
| BmrFI | CCNGG | 4 cut(s) | 423, 1778, 2151, 2372 |
| BmrI | ACTGGG | 1 cut(s) | 1356 |
| BmsI | GCATC | 3 cut(s) | 1416, 2179, 2215 |
| BmtI | GCTAGC | 2 cut(s) | 395, 1337 |
| BmuI | ACTGGG | 1 cut(s) | 1356 |
| BpiI | GAAGAC | 4 cut(s) | 236, 386, 1102, 1445 |
| BpmI | CTGGAG | 2 cut(s) | 405, 417 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1203 |
| BpuEI | CTTGAG | 2 cut(s) | 974, 997 |
| BpuMI | CCSGG | 1 cut(s) | 2151 |
| Bsa29I | ATCGAT | 1 cut(s) | 1928 |
| BsaAI | YACGTR | 1 cut(s) | 2053 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2145 |
| BsaJI | CCNNGG | 3 cut(s) | 80, 422, 432 |
| BsaWI | WCCGGW | 1 cut(s) | 2329 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2148, 2178 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 446, 725, 867, 1612, 1756, 2137 |
| Bse118I | RCCGGY | 2 cut(s) | 686, 1007 |
| Bse1I | ACTGG | 4 cut(s) | 178, 463, 1351, 1860 |
| Bse3DI | GCAATG | 4 cut(s) | 330, 704, 1270, 1654 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2145 |
| BseAI | TCCGGA | 1 cut(s) | 2329 |
| BseBI | CCWGG | 3 cut(s) | 423, 1778, 2372 |
| BseCI | ATCGAT | 1 cut(s) | 1928 |
| BseDI | CCNNGG | 3 cut(s) | 80, 422, 432 |
| BseGI | GGATG | 5 cut(s) | 459, 1974, 2146, 2146, 2339 |
| BseJI | GATNNNNATC | 1 cut(s) | 2145 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 446, 725, 867, 1612, 1756, 2137 |
| BseMI | GCAATG | 4 cut(s) | 330, 704, 1270, 1654 |
| BseMII | CTCAG | 4 cut(s) | 523, 1217, 1700, 2333 |
| BseNI | ACTGG | 4 cut(s) | 178, 463, 1351, 1860 |
| BseRI | GAGGAG | 4 cut(s) | 357, 1455, 1512, 2169 |
| BseSI | GKGCMC | 1 cut(s) | 2379 |
| BseXI | GCAGC | 5 cut(s) | 190, 231, 1324, 1709, 2215 |
| BsgI | GTGCAG | 2 cut(s) | 173, 1626 |
| BshNI | GGYRCC | 1 cut(s) | 2374 |
| BshVI | ATCGAT | 1 cut(s) | 1928 |
| BsiHKAI | GWGCWC | 2 cut(s) | 431, 840 |
| BsiHKCI | CYCGRG | 2 cut(s) | 102, 547 |
| BsiSI | CCGG | 4 cut(s) | 687, 1008, 2151, 2330 |
| BslFI | GGGAC | 4 cut(s) | 120, 1510, 1730, 2267 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 446, 725, 867, 1612, 1756, 2137 |
| BsmAI | GTCTC | 1 cut(s) | 594 |
| BsmFI | GGGAC | 4 cut(s) | 120, 1510, 1730, 2267 |
| BsoBI | CYCGRG | 2 cut(s) | 102, 547 |
| Bsp1286I | GDGCHC | 3 cut(s) | 431, 840, 2379 |
| Bsp13I | TCCGGA | 1 cut(s) | 2329 |
| Bsp1407I | TGTACA | 2 cut(s) | 138, 978 |
| Bsp19I | CCATGG | 1 cut(s) | 80 |
| BspACI | CCGC | 4 cut(s) | 690, 1277, 2306, 2312 |
| BspCNI | CTCAG | 4 cut(s) | 522, 1216, 1701, 2332 |
| BspDI | ATCGAT | 1 cut(s) | 1928 |
| BspEI | TCCGGA | 1 cut(s) | 2329 |
| BspLI | GGNNCC | 8 cut(s) | 438, 504, 584, 832, 872, 1565, 1872, 2376 |
| BspMAI | CTGCAG | 1 cut(s) | 1879 |
| BspMI | ACCTGC | 1 cut(s) | 610 |
| BspOI | GCTAGC | 2 cut(s) | 395, 1337 |
| BspPI | GGATC | 3 cut(s) | 140, 2033, 2264 |
| BspQI | GCTCTTC | 1 cut(s) | 213 |
| BspT107I | GGYRCC | 1 cut(s) | 2374 |
| BsrDI | GCAATG | 4 cut(s) | 330, 704, 1270, 1654 |
| BsrFI | RCCGGY | 2 cut(s) | 686, 1007 |
| BsrGI | TGTACA | 2 cut(s) | 138, 978 |
| BsrI | ACTGG | 4 cut(s) | 178, 463, 1351, 1860 |
| BssAI | RCCGGY | 2 cut(s) | 686, 1007 |
| BssECI | CCNNGG | 3 cut(s) | 80, 422, 432 |
| BssT1I | CCWWGG | 2 cut(s) | 80, 432 |
| Bst2UI | CCWGG | 3 cut(s) | 423, 1778, 2372 |
| Bst4CI | ACNGT | 8 cut(s) | 143, 298, 932, 1161, 1274, 2222, 2281, 2367 |
| Bst6I | CTCTTC | 5 cut(s) | 213, 914, 1420, 1544, 2055 |
| BstAUI | TGTACA | 2 cut(s) | 138, 978 |
| BstBAI | YACGTR | 1 cut(s) | 2053 |
| BstC8I | GCNNGC | 6 cut(s) | 393, 667, 688, 1335, 1661, 2096 |
| BstDEI | CTNAG | 6 cut(s) | 509, 1203, 1253, 1709, 1725, 2319 |
| BstDSI | CCRYGG | 1 cut(s) | 80 |
| BstF5I | GGATG | 5 cut(s) | 459, 1974, 2146, 2146, 2339 |
| BstMAI | GTCTC | 1 cut(s) | 594 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 212, 1274, 1592, 1697, 1793 |
| BstNI | CCWGG | 3 cut(s) | 423, 1778, 2372 |
| BstNSI | RCATGY | 2 cut(s) | 1146, 1807 |
| BstSCI | CCNGG | 4 cut(s) | 421, 1776, 2149, 2370 |
| BstSFI | CTRYAG | 1 cut(s) | 1875 |
| BstSLI | GKGCMC | 1 cut(s) | 2379 |
| BstV1I | GCAGC | 5 cut(s) | 190, 231, 1324, 1709, 2215 |
| BstV2I | GAAGAC | 4 cut(s) | 236, 386, 1102, 1445 |
| BstX2I | RGATCY | 2 cut(s) | 1714, 2038 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1867 |
| BstYI | RGATCY | 2 cut(s) | 1714, 2038 |
| Bsu15I | ATCGAT | 1 cut(s) | 1928 |
| BsuTUI | ATCGAT | 1 cut(s) | 1928 |
| BtgI | CCRYGG | 1 cut(s) | 80 |
| BtrI | CACGTC | 1 cut(s) | 1962 |
| BtsCI | GGATG | 5 cut(s) | 459, 1974, 2146, 2146, 2339 |
| BtsIMutI | CAGTG | 4 cut(s) | 148, 680, 1157, 2227 |
| BveI | ACCTGC | 1 cut(s) | 610 |
| Cac8I | GCNNGC | 6 cut(s) | 393, 667, 688, 1335, 1661, 2096 |
| CaiI | CAGNNNCTG | 2 cut(s) | 160, 2371 |
| Cfr10I | RCCGGY | 2 cut(s) | 686, 1007 |
| Cfr13I | GGNCC | 5 cut(s) | 831, 858, 871, 1042, 1444 |
| ClaI | ATCGAT | 1 cut(s) | 1928 |
| Csp6I | GTAC | 7 cut(s) | 139, 640, 979, 1153, 2119, 2251, 2323 |
| CviQI | GTAC | 7 cut(s) | 139, 640, 979, 1153, 2119, 2251, 2323 |
| DdeI | CTNAG | 6 cut(s) | 509, 1203, 1253, 1709, 1725, 2319 |
| DraIII | CACNNNGTG | 1 cut(s) | 1965 |
| EaeI | YGGCCR | 3 cut(s) | 609, 1941, 2067 |
| Eam1104I | CTCTTC | 5 cut(s) | 213, 914, 1420, 1544, 2055 |
| EarI | CTCTTC | 5 cut(s) | 213, 914, 1420, 1544, 2055 |
| EciI | GGCGGA | 1 cut(s) | 2295 |
| Eco130I | CCWWGG | 2 cut(s) | 80, 432 |
| Eco47I | GGWCC | 1 cut(s) | 1042 |
| Eco57I | CTGAAG | 2 cut(s) | 429, 2019 |
| Eco72I | CACGTG | 1 cut(s) | 2053 |
| Eco88I | CYCGRG | 2 cut(s) | 102, 547 |
| EcoO109I | RGGNCCY | 2 cut(s) | 871, 1042 |
| EcoRI | GAATTC | 1 cut(s) | 745 |
| EcoRII | CCWGG | 3 cut(s) | 421, 1776, 2370 |
| EcoT14I | CCWWGG | 2 cut(s) | 80, 432 |
| EcoT22I | ATGCAT | 1 cut(s) | 1431 |
| ErhI | CCWWGG | 2 cut(s) | 80, 432 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1308, 1340 |
| FaqI | GGGAC | 4 cut(s) | 120, 1510, 1730, 2267 |
| FauI | CCCGC | 2 cut(s) | 683, 1270 |
| FbaI | TGATCA | 3 cut(s) | 1392, 2143, 2352 |
| FblI | GTMKAC | 1 cut(s) | 269 |
| Fnu4HI | GCNGC | 5 cut(s) | 204, 245, 1338, 1698, 2229 |
| FokI | GGATG | 5 cut(s) | 466, 1981, 2133, 2153, 2326 |
| Fsp4HI | GCNGC | 5 cut(s) | 204, 245, 1338, 1698, 2229 |
| FspBI | CTAG | 5 cut(s) | 392, 477, 539, 965, 1334 |
| GluI | GCNGC | 5 cut(s) | 204, 245, 1338, 1698, 2229 |
| GsuI | CTGGAG | 2 cut(s) | 405, 417 |
| HapII | CCGG | 4 cut(s) | 687, 1008, 2151, 2330 |
| HincII | GTYRAC | 2 cut(s) | 52, 270 |
| HindII | GTYRAC | 2 cut(s) | 52, 270 |
| HindIII | AAGCTT | 2 cut(s) | 735, 1255 |
| HinfI | GANTC | 9 cut(s) | 72, 181, 271, 301, 1075, 1126, 1915, 1930, 2317 |
| HpaII | CCGG | 4 cut(s) | 687, 1008, 2151, 2330 |
| Hpy166II | GTNNAC | 7 cut(s) | 52, 270, 811, 928, 1155, 2050, 2119 |
| Hpy188I | TCNGA | 9 cut(s) | 306, 512, 907, 1420, 1527, 1893, 2038, 2043, 2344 |
| Hpy188III | TCNNGA | 6 cut(s) | 19, 991, 1085, 1977, 2330, 2356 |
| Hpy8I | GTNNAC | 7 cut(s) | 52, 270, 811, 928, 1155, 2050, 2119 |
| Hpy99I | CGWCG | 2 cut(s) | 1101, 1966 |
| HpyAV | CCTTC | 9 cut(s) | 247, 404, 1033, 1625, 1760, 1932, 2038, 2107, 2283 |
| HpyCH4III | ACNGT | 8 cut(s) | 143, 298, 932, 1161, 1274, 2222, 2281, 2367 |
| HpyCH4IV | ACGT | 2 cut(s) | 1961, 2052 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 212, 1274, 1592, 1697, 1793 |
| HpyF3I | CTNAG | 6 cut(s) | 509, 1203, 1253, 1709, 1725, 2319 |
| HpySE526I | ACGT | 2 cut(s) | 1961, 2052 |
| Kpn2I | TCCGGA | 1 cut(s) | 2329 |
| KroI | GCCGGC | 1 cut(s) | 686 |
| KroNI | GCCGGC | 1 cut(s) | 688 |
| Ksp22I | TGATCA | 3 cut(s) | 1392, 2143, 2352 |
| LguI | GCTCTTC | 1 cut(s) | 213 |
| LmnI | GCTCC | 8 cut(s) | 34, 426, 436, 694, 782, 1525, 1726, 1784 |
| Lsp1109I | GCAGC | 5 cut(s) | 190, 231, 1324, 1709, 2215 |
| LweI | GCATC | 3 cut(s) | 1416, 2179, 2215 |
| MaeI | CTAG | 5 cut(s) | 392, 477, 539, 965, 1334 |
| MaeII | ACGT | 2 cut(s) | 1961, 2052 |
| MaeIII | GTNAC | 5 cut(s) | 472, 932, 1342, 2125, 2216 |
| MfeI | CAATTG | 1 cut(s) | 1797 |
| MflI | RGATCY | 2 cut(s) | 1714, 2038 |
| MhlI | GDGCHC | 3 cut(s) | 431, 840, 2379 |
| MlsI | TGGCCA | 3 cut(s) | 611, 1943, 2069 |
| MluCI | AATT | 7 cut(s) | 13, 261, 745, 982, 1617, 1702, 1797 |
| MluNI | TGGCCA | 3 cut(s) | 611, 1943, 2069 |
| MlyI | GAGTC | 2 cut(s) | 265, 2311 |
| MmeI | TCCRAC | 4 cut(s) | 319, 431, 743, 1762 |
| Mox20I | TGGCCA | 3 cut(s) | 611, 1943, 2069 |
| Mph1103I | ATGCAT | 1 cut(s) | 1431 |
| MroI | TCCGGA | 1 cut(s) | 2329 |
| MroNI | GCCGGC | 1 cut(s) | 686 |
| MroXI | GAANNNNTTC | 2 cut(s) | 749, 888 |
| MscI | TGGCCA | 3 cut(s) | 611, 1943, 2069 |
| MseI | TTAA | 6 cut(s) | 576, 866, 876, 1283, 2288, 2384 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1295, 2223 |
| Msp20I | TGGCCA | 3 cut(s) | 611, 1943, 2069 |
| MspA1I | CMGCKG | 2 cut(s) | 203, 1207 |
| MspI | CCGG | 4 cut(s) | 687, 1008, 2151, 2330 |
| MspR9I | CCNGG | 4 cut(s) | 423, 1778, 2151, 2372 |
| MunI | CAATTG | 1 cut(s) | 1797 |
| MvaI | CCWGG | 3 cut(s) | 423, 1778, 2372 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 212, 1274, 1592, 1697, 1793 |
| NaeI | GCCGGC | 1 cut(s) | 688 |
| NciI | CCSGG | 1 cut(s) | 2151 |
| NcoI | CCATGG | 1 cut(s) | 80 |
| NgoMIV | GCCGGC | 1 cut(s) | 686 |
| NheI | GCTAGC | 2 cut(s) | 391, 1333 |
| NlaIV | GGNNCC | 8 cut(s) | 438, 504, 584, 832, 872, 1565, 1872, 2376 |
| NmuCI | GTSAC | 2 cut(s) | 1342, 2216 |
| NsiI | ATGCAT | 1 cut(s) | 1431 |
| NspI | RCATGY | 2 cut(s) | 1146, 1807 |
| PciI | ACATGT | 1 cut(s) | 1803 |
| PciSI | GCTCTTC | 1 cut(s) | 213 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 248 |
| PdiI | GCCGGC | 1 cut(s) | 688 |
| PdmI | GAANNNNTTC | 2 cut(s) | 749, 888 |
| PfeI | GAWTC | 7 cut(s) | 72, 181, 301, 1075, 1126, 1915, 1930 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 725 |
| PfoI | TCCNGGA | 1 cut(s) | 2149 |
| PkrI | GCNGC | 5 cut(s) | 205, 246, 1339, 1699, 2230 |
| PleI | GAGTC | 2 cut(s) | 265, 2311 |
| PmaCI | CACGTG | 1 cut(s) | 2053 |
| PmlI | CACGTG | 1 cut(s) | 2053 |
| PpsI | GAGTC | 2 cut(s) | 265, 2311 |
| Ppu21I | YACGTR | 1 cut(s) | 2053 |
| PpuMI | RGGWCCY | 1 cut(s) | 1042 |
| PscI | ACATGT | 1 cut(s) | 1803 |
| PshBI | ATTAAT | 1 cut(s) | 576 |
| Psp5II | RGGWCCY | 1 cut(s) | 1042 |
| Psp6I | CCWGG | 3 cut(s) | 421, 1776, 2370 |
| PspCI | CACGTG | 1 cut(s) | 2053 |
| PspGI | CCWGG | 3 cut(s) | 421, 1776, 2370 |
| PspN4I | GGNNCC | 8 cut(s) | 438, 504, 584, 832, 872, 1565, 1872, 2376 |
| PspPI | GGNCC | 5 cut(s) | 831, 858, 871, 1042, 1444 |
| PspPPI | RGGWCCY | 1 cut(s) | 1042 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 1145, 1177, 1286, 1318 |
| PstI | CTGCAG | 1 cut(s) | 1879 |
| PstNI | CAGNNNCTG | 2 cut(s) | 160, 2371 |
| PsuI | RGATCY | 2 cut(s) | 1714, 2038 |
| PvuII | CAGCTG | 2 cut(s) | 203, 1207 |
| RsaI | GTAC | 7 cut(s) | 140, 641, 980, 1154, 2120, 2252, 2324 |
| RsaNI | GTAC | 7 cut(s) | 139, 640, 979, 1153, 2119, 2251, 2323 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1295, 2223 |
| SalI | GTCGAC | 1 cut(s) | 268 |
| SapI | GCTCTTC | 1 cut(s) | 213 |
| SaqAI | TTAA | 6 cut(s) | 576, 866, 876, 1283, 2288, 2384 |
| SatI | GCNGC | 5 cut(s) | 204, 245, 1338, 1698, 2229 |
| Sau96I | GGNCC | 5 cut(s) | 831, 858, 871, 1042, 1444 |
| ScaI | AGTACT | 2 cut(s) | 641, 2252 |
| SchI | GAGTC | 2 cut(s) | 265, 2311 |
| ScrFI | CCNGG | 4 cut(s) | 423, 1778, 2151, 2372 |
| SduI | GDGCHC | 3 cut(s) | 431, 840, 2379 |
| SfaNI | GCATC | 3 cut(s) | 1416, 2179, 2215 |
| SfcI | CTRYAG | 1 cut(s) | 1875 |
| SinI | GGWCC | 1 cut(s) | 1042 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1295, 2223 |
| SmlI | CTYRAG | 2 cut(s) | 989, 1012 |
| SmoI | CTYRAG | 2 cut(s) | 989, 1012 |
| Sse9I | AATT | 7 cut(s) | 13, 261, 745, 982, 1617, 1702, 1797 |
| SsiI | CCGC | 4 cut(s) | 690, 1277, 2306, 2312 |
| SspMI | CTAG | 5 cut(s) | 392, 477, 539, 965, 1334 |
| StyD4I | CCNGG | 4 cut(s) | 421, 1776, 2149, 2370 |
| StyI | CCWWGG | 2 cut(s) | 80, 432 |
| TaaI | ACNGT | 8 cut(s) | 143, 298, 932, 1161, 1274, 2222, 2281, 2367 |
| TaiI | ACGT | 2 cut(s) | 1964, 2055 |
| TaqI | TCGA | 6 cut(s) | 18, 251, 269, 1468, 1928, 1950 |
| TasI | AATT | 7 cut(s) | 13, 261, 745, 982, 1617, 1702, 1797 |
| TatI | WGTACW | 5 cut(s) | 138, 639, 978, 2250, 2322 |
| TfiI | GAWTC | 7 cut(s) | 72, 181, 301, 1075, 1126, 1915, 1930 |
| Tru1I | TTAA | 6 cut(s) | 576, 866, 876, 1283, 2288, 2384 |
| Tru9I | TTAA | 6 cut(s) | 576, 866, 876, 1283, 2288, 2384 |
| TscAI | CASTG | 4 cut(s) | 148, 680, 1164, 2227 |
| TseFI | GTSAC | 2 cut(s) | 1342, 2216 |
| TseI | GCWGC | 5 cut(s) | 203, 244, 1337, 1697, 2228 |
| Tsp45I | GTSAC | 2 cut(s) | 1342, 2216 |
| TspGWI | ACGGA | 2 cut(s) | 2308, 2399 |
| TspRI | CASTG | 4 cut(s) | 148, 680, 1164, 2227 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 725 |
| VpaK11BI | GGWCC | 1 cut(s) | 1042 |
| VspI | ATTAAT | 1 cut(s) | 576 |
| XapI | RAATTY | 2 cut(s) | 13, 745 |
| XceI | RCATGY | 2 cut(s) | 1146, 1807 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2239 |
| XmiI | GTMKAC | 1 cut(s) | 269 |
| XmnI | GAANNNNTTC | 2 cut(s) | 749, 888 |
| XspI | CTAG | 5 cut(s) | 392, 477, 539, 965, 1334 |
| ZrmI | AGTACT | 2 cut(s) | 641, 2252 |
| Zsp2I | ATGCAT | 1 cut(s) | 1431 |