Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0004918

Physical Location & Seq

Genomic Coordinates Forward (+)

53232950 .. 53235456

Gene Structure 2507 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0433700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1914 bp

ATGCGCCCAATCACCCAATCCCCGTCACCCTCATCCCCTCAGCCACCGCAGCCCCACCGCACCAACCTCCTCGTCCCACTCGCCGGCGCCGCCACCACCACCGCCTTCTCCCTCCTCCTCTTCCTCCTCGTCTGCTTCCGCAAAATCACCCGCAAGCGCACCGCCCCCGAAGCCGACTCCAAGCCGCCCCACCGCTTCTCCTACACCCTCCTCCGACGCGCCACAGACTCCTTCTCCCCCACGCTCCGCCTCGGCCAGGGCGGCTCCGGCTCCGTATTCTTCGGAACGCTCCCCCACACCCGGCAGGACGTCGCCGTCAAGCTCATGGACTCCGGGTCCCTCCAGGGCGAGCGCGAGTTCCAGAACGAGCTCTTCTTCGCCTCCATGCTCGACTCCCGACACGTCATCTCGGTCCTCGGATTCTCCTCCGATCGGAAACGGCGCCGTATGCTGCTGGTTTACGAGTTCATGAGCAACGGGAACCTGCAGGACGCTCTGCTGCACCGGAAGTGCCCGGAGCTGATGGAGTGGAAGAAGAGGTTTTCGATTATGGTGGATGTAGCTAAGGGTCTTTGCTACCTTCATGGATTGGACCCGCCGGTTGTTCACGGTGACGTCAAGCCGAGTAATGTGCTGCTGGACGGCAGCTTCAATGTGAAGATTGCCGATTTCGGGCTGGCGAGGCTAAAGTCGGAAATTCAGGTTGTGATTGGGGAGGATGTGAAGAAGGGTGAGGGTGTGGAGGTGAAGAAGGAGGAGCTTGAAGACTGTGGCTCTGTGGTTGAGGAAACCGAGAGTGTTAGTGTTGCCACTGCAGGGTTTGAGGATTCGAATTTGGGAGTCGATCAGTCGCCGGAGAGTTTAGCGATCAAGCTGCCCGTTTCGCCGGAGACTCCGGTGACGGCGTCACCACCGGAGGAGAATGTGGATAAGGAGGAGGGAGAGAAGCCGAGTGTGAATAAGGATTGGTGGATGAGACAGGAGAATGGGAGTGGTGTGAAGGACTATGTGATGGAGTGGATTGGGAATGAGATTGGGAATGAGAGGCCCACGGCTGCTTCGAGTAGTGAAATGGTGGGGAGGTCGGAGAAGAAGAAGAAGAAGAAGAATAAGAAGAGGAATAGGAAGAGATTGGATTGGTGGATGTCGATGGAGGAGAGTGGGAAAGTTTCGAGCAAGGAGAAGAGGAGGCCTGCCAGGGAATGGTGGAAGGAGGAGTATTGTGAGGAGCTGACAAAGAAGAAAAAGAAGAAGGATAAGAAGCAGAGTAAAGGAATGAGCTTTGATGAGAATGAGAGTGACTGGTGGCCACACGACGATGAATTGTATGCTGAGACCAGGAAGAAGAAGAAGAGTAGGAGCAGGAGTTGGGGGAGTATGAGTAGTATTGATTGGTGGTTGGATGGAATTCGCCGTAATGCTAGTAATAATTCTGCTAGTGGGGAAATTCCTAAAAGCTGTGGCATGAGTAGTACGCCAAGTATGAGAGGAACTGTATGTTATGTTGCCCCCGAATATGGTTTTGGTGGTGATCCTTCAGAATTATGTGATGTTTATAGTTTTGGGGTGTTGTTGTTGGTTGTTATAGCCGGAAGGCGCCCACTTCAGGTAACAAATTCGCCTCTGTCAGAGTTCCAGAGAGCGAATTTGTTGTCTTGGGCACGCCATCTTGCTCGTGCTGGGAAGCTTATTGATCTTGTTGATAAGTCCATTCAGGGTCTGGAGCAAGAACAAGCTCTCCTTTGCATCACTGTGGCATTAGTTTGTTTGCAAAAGATACCTGCTCGCCGGCCTTCAATGAAAGAGGTTGTGGGGATGCTGACTGGTGAGTTAGAACCACCCAAATTACCACCAGAGTTAACCACGTCAGCTCAGTCACGGTTCTCACACAAGTCCCATAGAAAGGTCCGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cyt-b5 OPT

Protein Analysis

637

Amino Acids

71.54

Weight (kDa)

9.16

Isoelectric Point (pI)

58.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	83 - 229	8.1e-25	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	83 - 231	1.3e-25	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004918)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G24380 AT5G53550 AT5G53550 AT5G53550 AT5G53550 AT5G53550 AT5G53550
fragaria_vesca	FvH4_7g32520 FvH4_7g32520 FvH4_7g32520 FvH4_7g32520 FvH4_7g32520
malus_domestica	MD01G1225900.v1.1 MD07G1296400.v1.1
prunus_persica	Prupe.2G316000_v2.0.a1
pyrus_communis	pycom01g23440 pycom07g26920
rosa_chinensis	RchiOBHm_Chr1g0382361
rosa_laevigata	RLG00000026183
rosa_multiflora	Rmu_sc0000110.1_g000042 Rmu_sc0006177.1_g000003
rosa_roxburghii	Rroxscaffold_4G00278160
rosa_rugosa	Rorug01G0433600 Rorug01G0433700 Rorug01G0433800
rosa_samantha	Rh1AG458400 Rh1BG414700 Rh1CG428800 Rh1DG446800
rosa_wichuraiana	Rw1G041260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	314
AatII	GACGTC	2 cut(s)	312, 618
Acc36I	ACCTGC	2 cut(s)	492, 1789
AccB1I	GGYRCC	3 cut(s)	86, 441, 1596
AccB7I	CCANNNNNTGG	1 cut(s)	1203
AccII	CGCG	2 cut(s)	219, 354
AclWI	GGATC	1 cut(s)	1526
AcoI	YGGCCR	2 cut(s)	253, 1307
AcsI	RAATTY	6 cut(s)	696, 832, 1407, 1446, 1615, 1645
AcuI	CTGAAG	2 cut(s)	1521, 1589
AcyI	GRCGYC	6 cut(s)	87, 309, 442, 615, 905, 1597
AfaI	GTAC	1 cut(s)	1474
AflIII	ACRYGT	1 cut(s)	400
AgsI	TTSAA	3 cut(s)	652, 764, 1797
AhdI	GACNNNNNGTC	1 cut(s)	334
AjiI	CACGTC	2 cut(s)	403, 1866
AjnI	CCWGG	4 cut(s)	255, 342, 1196, 1337
AjuI	GAANNNNNNNTTGG	2 cut(s)	1506, 1538
AloI	GAACNNNNNNTCC	2 cut(s)	1722, 1754
Alw21I	GWGCWC	1 cut(s)	372
Alw26I	GTCTC	3 cut(s)	884, 970, 1328
AlwI	GGATC	1 cut(s)	1526
AlwNI	CAGNNNCTG	1 cut(s)	1720
AoxI	GGCC	5 cut(s)	253, 1046, 1190, 1307, 1790
ApeKI	GCWGC	7 cut(s)	49, 451, 499, 634, 645, 874, 1055
ApoI	RAATTY	6 cut(s)	696, 832, 1407, 1446, 1615, 1645
ArsI	GACNNNNNNTTYG	2 cut(s)	1637, 1669
AspLEI	GCGC	7 cut(s)	6, 89, 159, 221, 354, 444, 1599
AspS9I	GGNCC	5 cut(s)	336, 412, 592, 1047, 1906
AsuC2I	CCSGG	3 cut(s)	301, 334, 515
AsuII	TTCGAA	1 cut(s)	830
AvaII	GGWCC	4 cut(s)	336, 412, 592, 1906
BaeGI	GKGCMC	2 cut(s)	515, 1663
BalI	TGGCCA	1 cut(s)	1309
BanI	GGYRCC	3 cut(s)	86, 441, 1596
BanII	GRGCYC	1 cut(s)	372
BauI	CACGAG	1 cut(s)	1674
BbsI	GAAGAC	1 cut(s)	771
Bbv12I	GWGCWC	1 cut(s)	372
BbvCI	CCTCAGC	1 cut(s)	39
BbvI	GCAGC	7 cut(s)	61, 438, 486, 621, 657, 861, 1042
BccI	CCATC	5 cut(s)	517, 1006, 1144, 1397, 1674
BceAI	ACGGC	7 cut(s)	299, 429, 455, 658, 918, 1068, 1398
BcgI	CGANNNNNNTGC	4 cut(s)	613, 647, 856, 890
BciT130I	CCWGG	4 cut(s)	257, 344, 1198, 1339
BcnI	CCSGG	3 cut(s)	301, 334, 515
BcoDI	GTCTC	3 cut(s)	884, 970, 1328
BfaI	CTAG	2 cut(s)	1422, 1437
BfmI	CTRYAG	2 cut(s)	485, 813
BfoI	RGCGCY	3 cut(s)	90, 445, 1600
BfuAI	ACCTGC	2 cut(s)	492, 1789
BglI	GCCNNNNNGGC	1 cut(s)	261
Bme1390I	CCNGG	7 cut(s)	257, 301, 334, 344, 515, 1198, 1339
Bme18I	GGWCC	4 cut(s)	336, 412, 592, 1906
BmeRI	GACNNNNNGTC	1 cut(s)	334
BmgBI	CACGTC	2 cut(s)	403, 1866
BmgT120I	GGNCC	5 cut(s)	336, 412, 592, 1047, 1906
BmiI	GGNNCC	9 cut(s)	88, 265, 271, 337, 338, 443, 482, 594, 1598
BmrFI	CCNGG	7 cut(s)	257, 301, 334, 344, 515, 1198, 1339
BmsI	GCATC	2 cut(s)	1755, 1806
BpiI	GAAGAC	1 cut(s)	771
BpmI	CTGGAG	2 cut(s)	326, 1742
Bpu10I	CCTNAGC	2 cut(s)	39, 564
Bpu14I	TTCGAA	1 cut(s)	830
BpuMI	CCSGG	3 cut(s)	301, 334, 515
BsaHI	GRCGYC	6 cut(s)	87, 309, 442, 615, 905, 1597
BsaI	GGTCTC	1 cut(s)	1328
BsaJI	CCNNGG	6 cut(s)	250, 256, 343, 415, 1050, 1197
BsaWI	WCCGGW	4 cut(s)	504, 895, 913, 1908
Bse118I	RCCGGY	3 cut(s)	83, 598, 1788
Bse1I	ACTGG	2 cut(s)	1307, 1828
BseBI	CCWGG	4 cut(s)	257, 344, 1198, 1339
BseDI	CCNNGG	6 cut(s)	250, 256, 343, 415, 1050, 1197
BseGI	GGATG	7 cut(s)	32, 562, 724, 978, 1149, 1408, 1821
BseMII	CTCAG	3 cut(s)	53, 1323, 1886
BseNI	ACTGG	2 cut(s)	1307, 1828
BseSI	GKGCMC	2 cut(s)	515, 1663
BseXI	GCAGC	7 cut(s)	61, 438, 486, 621, 657, 861, 1042
BseYI	CCCAGC	1 cut(s)	1679
BsgI	GTGCAG	1 cut(s)	485
Bsh1236I	CGCG	2 cut(s)	219, 354
Bsh1285I	CGRYCG	1 cut(s)	433
BshFI	GGCC	5 cut(s)	255, 1048, 1192, 1309, 1792
BshNI	GGYRCC	3 cut(s)	86, 441, 1596
BsiEI	CGRYCG	1 cut(s)	433
BsiHKAI	GWGCWC	1 cut(s)	372
BslFI	GGGAC	3 cut(s)	59, 322, 1879
BsmAI	GTCTC	3 cut(s)	884, 970, 1328
BsmFI	GGGAC	3 cut(s)	59, 322, 1879
BsnI	GGCC	5 cut(s)	255, 1048, 1192, 1309, 1792
Bso31I	GGTCTC	1 cut(s)	1328
Bsp119I	TTCGAA	1 cut(s)	830
Bsp1286I	GDGCHC	3 cut(s)	372, 515, 1663
Bsp143I	GATC	5 cut(s)	430, 844, 867, 1531, 1693
BspANI	GGCC	5 cut(s)	255, 1048, 1192, 1309, 1792
BspCNI	CTCAG	3 cut(s)	52, 1324, 1885
BspFNI	CGCG	2 cut(s)	219, 354
BspHI	TCATGA	1 cut(s)	468
BspLI	GGNNCC	9 cut(s)	88, 265, 271, 337, 338, 443, 482, 594, 1598
BspMAI	CTGCAG	2 cut(s)	489, 817
BspMI	ACCTGC	2 cut(s)	492, 1789
BspPI	GGATC	1 cut(s)	1526
BspQI	GCTCTTC	1 cut(s)	377
BspT104I	TTCGAA	1 cut(s)	830
BspT107I	GGYRCC	3 cut(s)	86, 441, 1596
BspTNI	GGTCTC	1 cut(s)	1328
BsrFI	RCCGGY	3 cut(s)	83, 598, 1788
BsrI	ACTGG	2 cut(s)	1307, 1828
BssAI	RCCGGY	3 cut(s)	83, 598, 1788
BssECI	CCNNGG	6 cut(s)	250, 256, 343, 415, 1050, 1197
BssMI	GATC	5 cut(s)	430, 844, 867, 1531, 1693
BssNI	GRCGYC	6 cut(s)	87, 309, 442, 615, 905, 1597
BssSI	CACGAG	1 cut(s)	1674
Bst2BI	CACGAG	1 cut(s)	1674
Bst2UI	CCWGG	4 cut(s)	257, 344, 1198, 1339
Bst4CI	ACNGT	5 cut(s)	611, 770, 1495, 1753, 1881
Bst6I	CTCTTC	7 cut(s)	125, 377, 530, 1109, 1121, 1178, 1346
BstACI	GRCGYC	6 cut(s)	87, 309, 442, 615, 905, 1597
BstBI	TTCGAA	1 cut(s)	830
BstC8I	GCNNGC	8 cut(s)	85, 155, 350, 678, 1194, 1663, 1786, 1790
BstDEI	CTNAG	4 cut(s)	39, 564, 1332, 1872
BstDSI	CCRYGG	1 cut(s)	1050
BstENI	CCTNNNNNAGG	1 cut(s)	254
BstF5I	GGATG	7 cut(s)	32, 562, 724, 978, 1149, 1408, 1821
BstFNI	CGCG	2 cut(s)	219, 354
BstH2I	RGCGCY	3 cut(s)	90, 445, 1600
BstHHI	GCGC	7 cut(s)	6, 89, 159, 221, 354, 444, 1599
BstKTI	GATC	5 cut(s)	433, 847, 870, 1534, 1696
BstMAI	GTCTC	3 cut(s)	884, 970, 1328
BstMBI	GATC	5 cut(s)	430, 844, 867, 1531, 1693
BstMCI	CGRYCG	1 cut(s)	433
BstMWI	GCNNNNNNNGC	8 cut(s)	49, 89, 170, 261, 267, 448, 682, 883
BstNI	CCWGG	4 cut(s)	257, 344, 1198, 1339
BstSCI	CCNGG	7 cut(s)	255, 299, 332, 342, 513, 1196, 1337
BstSFI	CTRYAG	2 cut(s)	485, 813
BstSLI	GKGCMC	2 cut(s)	515, 1663
BstUI	CGCG	2 cut(s)	219, 354
BstV1I	GCAGC	7 cut(s)	61, 438, 486, 621, 657, 861, 1042
BstV2I	GAAGAC	1 cut(s)	771
BsuRI	GGCC	5 cut(s)	255, 1048, 1192, 1309, 1792
BtgI	CCRYGG	1 cut(s)	1050
BtrI	CACGTC	2 cut(s)	403, 1866
BtsCI	GGATG	7 cut(s)	32, 562, 724, 978, 1149, 1408, 1821
BtsI	GCAGTG	1 cut(s)	810
BtsIMutI	CAGTG	2 cut(s)	810, 1749
BveI	ACCTGC	2 cut(s)	492, 1789
Cac8I	GCNNGC	8 cut(s)	85, 155, 350, 678, 1194, 1663, 1786, 1790
CaiI	CAGNNNCTG	1 cut(s)	1720
CciI	TCATGA	1 cut(s)	468
CfoI	GCGC	7 cut(s)	6, 89, 159, 221, 354, 444, 1599
Cfr10I	RCCGGY	3 cut(s)	83, 598, 1788
Cfr13I	GGNCC	5 cut(s)	336, 412, 592, 1047, 1906
CseI	GACGC	3 cut(s)	225, 500, 894
Csp6I	GTAC	1 cut(s)	1473
CviAII	CATG	5 cut(s)	325, 385, 469, 584, 1465
CviQI	GTAC	1 cut(s)	1473
DdeI	CTNAG	4 cut(s)	39, 564, 1332, 1872
DinI	GGCGCC	3 cut(s)	88, 443, 1598
DpnI	GATC	5 cut(s)	432, 846, 869, 1533, 1695
DpnII	GATC	5 cut(s)	430, 844, 867, 1531, 1693
DrdI	GACNNNNNNGTC	1 cut(s)	314
DriI	GACNNNNNGTC	1 cut(s)	334
DseDI	GACNNNNNNGTC	1 cut(s)	314
EaeI	YGGCCR	2 cut(s)	253, 1307
Eam1104I	CTCTTC	7 cut(s)	125, 377, 530, 1109, 1121, 1178, 1346
Eam1105I	GACNNNNNGTC	1 cut(s)	334
EarI	CTCTTC	7 cut(s)	125, 377, 530, 1109, 1121, 1178, 1346
EciI	GGCGGA	1 cut(s)	236
Ecl136II	GAGCTC	1 cut(s)	370
Eco147I	AGGCCT	1 cut(s)	1192
Eco24I	GRGCYC	1 cut(s)	372
Eco31I	GGTCTC	1 cut(s)	1328
Eco47I	GGWCC	4 cut(s)	336, 412, 592, 1906
Eco53kI	GAGCTC	1 cut(s)	370
Eco57I	CTGAAG	2 cut(s)	1521, 1589
EcoICRI	GAGCTC	1 cut(s)	370
EcoNI	CCTNNNNNAGG	1 cut(s)	254
EcoO109I	RGGNCCY	1 cut(s)	336
EcoRI	GAATTC	1 cut(s)	1407
EcoRII	CCWGG	4 cut(s)	255, 342, 1196, 1337
EcoT38I	GRGCYC	1 cut(s)	372
EgeI	GGCGCC	3 cut(s)	88, 443, 1598
EheI	GGCGCC	3 cut(s)	88, 443, 1598
FaeI	CATG	5 cut(s)	328, 388, 472, 587, 1468
FalI	AAGNNNNNCTT	2 cut(s)	1725, 1757
FaqI	GGGAC	3 cut(s)	59, 322, 1879
FatI	CATG	5 cut(s)	324, 384, 468, 583, 1464
FauI	CCCGC	2 cut(s)	158, 603
FokI	GGATG	7 cut(s)	19, 569, 731, 985, 1156, 1415, 1828
FriOI	GRGCYC	1 cut(s)	372
FspBI	CTAG	2 cut(s)	1422, 1437
GlaI	GCGC	7 cut(s)	5, 88, 158, 220, 353, 443, 1598
GsaI	CCCAGC	1 cut(s)	1683
GsuI	CTGGAG	2 cut(s)	326, 1742
HaeII	RGCGCY	3 cut(s)	90, 445, 1600
HaeIII	GGCC	5 cut(s)	255, 1048, 1192, 1309, 1792
HgaI	GACGC	3 cut(s)	225, 500, 894
HhaI	GCGC	7 cut(s)	6, 89, 159, 221, 354, 444, 1599
Hin1I	GRCGYC	6 cut(s)	87, 309, 442, 615, 905, 1597
Hin1II	CATG	5 cut(s)	328, 388, 472, 587, 1468
Hin6I	GCGC	7 cut(s)	4, 87, 157, 219, 352, 442, 1597
HinP1I	GCGC	7 cut(s)	4, 87, 157, 219, 352, 442, 1597
HincII	GTYRAC	1 cut(s)	1860
HindII	GTYRAC	1 cut(s)	1860
HindIII	AAGCTT	1 cut(s)	1685
HinfI	GANTC	8 cut(s)	176, 227, 329, 392, 420, 827, 840, 892
HpaI	GTTAAC	1 cut(s)	1860
Hpy166II	GTNNAC	3 cut(s)	460, 607, 1860
Hpy188I	TCNGA	9 cut(s)	215, 284, 419, 430, 435, 694, 1087, 1540, 1630
Hpy188III	TCNNGA	5 cut(s)	361, 396, 469, 1636, 1721
Hpy8I	GTNNAC	3 cut(s)	460, 607, 1860
Hpy99I	CGWCG	3 cut(s)	219, 314, 1319
HpyCH4III	ACNGT	5 cut(s)	611, 770, 1495, 1753, 1881
HpyCH4IV	ACGT	4 cut(s)	309, 402, 615, 1865
HpyCH4V	TGCA	5 cut(s)	487, 502, 815, 1746, 1771
HpyF10VI	GCNNNNNNNGC	8 cut(s)	49, 89, 170, 261, 267, 448, 682, 883
HpyF3I	CTNAG	4 cut(s)	39, 564, 1332, 1872
HpySE526I	ACGT	4 cut(s)	309, 402, 615, 1865
Hsp92I	GRCGYC	6 cut(s)	87, 309, 442, 615, 905, 1597
Hsp92II	CATG	5 cut(s)	328, 388, 472, 587, 1468
HspAI	GCGC	7 cut(s)	4, 87, 157, 219, 352, 442, 1597
KasI	GGCGCC	3 cut(s)	86, 441, 1596
KflI	GGGWCCC	1 cut(s)	336
KroI	GCCGGC	2 cut(s)	83, 1788
KroNI	GCCGGC	2 cut(s)	85, 1790
KspAI	GTTAAC	1 cut(s)	1860
Kzo9I	GATC	5 cut(s)	430, 844, 867, 1531, 1693
LguI	GCTCTTC	1 cut(s)	377
LmnI	GCTCC	9 cut(s)	249, 269, 275, 294, 517, 757, 1228, 1359, 1723
Lsp1109I	GCAGC	7 cut(s)	61, 438, 486, 621, 657, 861, 1042
LweI	GCATC	2 cut(s)	1755, 1806
MaeI	CTAG	2 cut(s)	1422, 1437
MaeII	ACGT	4 cut(s)	309, 402, 615, 1865
MaeIII	GTNAC	7 cut(s)	24, 611, 898, 906, 1298, 1609, 1875
MalI	GATC	5 cut(s)	432, 846, 869, 1533, 1695
MboI	GATC	5 cut(s)	430, 844, 867, 1531, 1693
MhlI	GDGCHC	3 cut(s)	372, 515, 1663
MlsI	TGGCCA	1 cut(s)	1309
MluNI	TGGCCA	1 cut(s)	1309
Mly113I	GGCGCC	3 cut(s)	87, 442, 1597
MlyI	GAGTC	6 cut(s)	170, 221, 323, 386, 849, 886
MmeI	TCCRAC	4 cut(s)	238, 672, 1065, 1380
Mox20I	TGGCCA	1 cut(s)	1309
MreI	CGCCGGCG	1 cut(s)	83
MroNI	GCCGGC	2 cut(s)	83, 1788
MscI	TGGCCA	1 cut(s)	1309
MseI	TTAA	1 cut(s)	1859
MslI	CAYNNNNRTG	2 cut(s)	1317, 1751
Msp20I	TGGCCA	1 cut(s)	1309
MspR9I	CCNGG	7 cut(s)	257, 301, 334, 344, 515, 1198, 1339
MvaI	CCWGG	4 cut(s)	257, 344, 1198, 1339
MvnI	CGCG	2 cut(s)	219, 354
MwoI	GCNNNNNNNGC	8 cut(s)	49, 89, 170, 261, 267, 448, 682, 883
NaeI	GCCGGC	2 cut(s)	85, 1790
NarI	GGCGCC	3 cut(s)	87, 442, 1597
NciI	CCSGG	3 cut(s)	301, 334, 515
NdeII	GATC	5 cut(s)	430, 844, 867, 1531, 1693
NgoMIV	GCCGGC	2 cut(s)	83, 1788
NlaIII	CATG	5 cut(s)	328, 388, 472, 587, 1468
NlaIV	GGNNCC	9 cut(s)	88, 265, 271, 337, 338, 443, 482, 594, 1598
NmeAIII	GCCGAG	3 cut(s)	231, 648, 975
NmuCI	GTSAC	6 cut(s)	24, 611, 898, 906, 1298, 1875
NspV	TTCGAA	1 cut(s)	830
PagI	TCATGA	1 cut(s)	468
PceI	AGGCCT	1 cut(s)	1192
PciSI	GCTCTTC	1 cut(s)	377
PcsI	WCGNNNNNNNCGW	1 cut(s)	1058
PdiI	GCCGGC	2 cut(s)	85, 1790
PfeI	GAWTC	2 cut(s)	420, 827
PflFI	GACNNNGTC	1 cut(s)	904
PflMI	CCANNNNNTGG	1 cut(s)	1203
Ple19I	CGATCG	1 cut(s)	433
PleI	GAGTC	6 cut(s)	170, 221, 323, 386, 848, 886
PluTI	GGCGCC	3 cut(s)	90, 445, 1600
PpsI	GAGTC	6 cut(s)	170, 221, 323, 386, 848, 886
PpuMI	RGGWCCY	1 cut(s)	336
Psp124BI	GAGCTC	1 cut(s)	372
Psp5II	RGGWCCY	1 cut(s)	336
Psp6I	CCWGG	4 cut(s)	255, 342, 1196, 1337
PspFI	CCCAGC	1 cut(s)	1679
PspGI	CCWGG	4 cut(s)	255, 342, 1196, 1337
PspN4I	GGNNCC	9 cut(s)	88, 265, 271, 337, 338, 443, 482, 594, 1598
PspPI	GGNCC	5 cut(s)	336, 412, 592, 1047, 1906
PspPPI	RGGWCCY	1 cut(s)	336
PstI	CTGCAG	2 cut(s)	489, 817
PstNI	CAGNNNCTG	1 cut(s)	1720
PsyI	GACNNNGTC	1 cut(s)	904
PvuI	CGATCG	1 cut(s)	433
RsaI	GTAC	1 cut(s)	1474
RsaNI	GTAC	1 cut(s)	1473
RseI	CAYNNNNRTG	2 cut(s)	1317, 1751
SacI	GAGCTC	1 cut(s)	372
SapI	GCTCTTC	1 cut(s)	377
SaqAI	TTAA	1 cut(s)	1859
Sau3AI	GATC	5 cut(s)	430, 844, 867, 1531, 1693
Sau96I	GGNCC	5 cut(s)	336, 412, 592, 1047, 1906
SbfI	CCTGCAGG	1 cut(s)	489
SchI	GAGTC	6 cut(s)	170, 221, 323, 386, 849, 886
ScrFI	CCNGG	7 cut(s)	257, 301, 334, 344, 515, 1198, 1339
SdaI	CCTGCAGG	1 cut(s)	489
SduI	GDGCHC	3 cut(s)	372, 515, 1663
SfaNI	GCATC	2 cut(s)	1755, 1806
SfcI	CTRYAG	2 cut(s)	485, 813
SfoI	GGCGCC	3 cut(s)	88, 443, 1598
SfuI	TTCGAA	1 cut(s)	830
SgrAI	CRCCGGYG	1 cut(s)	83
SinI	GGWCC	4 cut(s)	336, 412, 592, 1906
SmiMI	CAYNNNNRTG	2 cut(s)	1317, 1751
Sse8387I	CCTGCAGG	1 cut(s)	489
SseBI	AGGCCT	1 cut(s)	1192
SspDI	GGCGCC	3 cut(s)	86, 441, 1596
SspMI	CTAG	2 cut(s)	1422, 1437
SstI	GAGCTC	1 cut(s)	372
StuI	AGGCCT	1 cut(s)	1192
StyD4I	CCNGG	7 cut(s)	255, 299, 332, 342, 513, 1196, 1337
TaaI	ACNGT	5 cut(s)	611, 770, 1495, 1753, 1881
TaiI	ACGT	4 cut(s)	312, 405, 618, 1868
TaqI	TCGA	7 cut(s)	390, 545, 830, 843, 1061, 1148, 1172
TaqII	GACCGA	1 cut(s)	400
TauI	GCSGC	3 cut(s)	92, 187, 264
TfiI	GAWTC	2 cut(s)	420, 827
Tru1I	TTAA	1 cut(s)	1859
Tru9I	TTAA	1 cut(s)	1859
TscAI	CASTG	2 cut(s)	817, 1756
TseFI	GTSAC	6 cut(s)	24, 611, 898, 906, 1298, 1875
TseI	GCWGC	7 cut(s)	49, 451, 499, 634, 645, 874, 1055
Tsp45I	GTSAC	6 cut(s)	24, 611, 898, 906, 1298, 1875
TspDTI	ATGAA	4 cut(s)	457, 572, 1335, 1814
TspGWI	ACGGA	1 cut(s)	262
TspRI	CASTG	2 cut(s)	817, 1756
Tth111I	GACNNNGTC	1 cut(s)	904
Van91I	CCANNNNNTGG	1 cut(s)	1203
VpaK11BI	GGWCC	4 cut(s)	336, 412, 592, 1906
XagI	CCTNNNNNAGG	1 cut(s)	254
XapI	RAATTY	6 cut(s)	696, 832, 1407, 1446, 1615, 1645
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1717
XspI	CTAG	2 cut(s)	1422, 1437
ZraI	GACGTC	2 cut(s)	310, 616

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.