Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0004645

Physical Location & Seq

Genomic Coordinates Forward (+)

9718025 .. 9721762

Gene Structure 3738 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000027225

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1533 bp

ATGAGTCGAAGCCGGTTGGAGCAGCTAATAAGTCGAAGCCGGTTGGAGCAGCTCAAACCTCCGACCTTGGTGGCATTGCCGGAAAAAACCAAGGCTTTATTGGTCCGCTGCATGCGCGTGGGACTCATCCTCTGTCTGATCGCGTCAATCGCACTCGCCCTCTGCTCCGCCTTCTCTTCCCAATCCCACTGGTTCCCCCTCCTCGACCGAAACCGAACCCGCTCCGCCACCTCCATCTTCTCCTCCACCACCACCACCACCACCACCGACGTCGACAGCGAACCCCCCACCAACATCTCCCACATTCTCTTCAGCATCGGCAGCTCCGTCAACACGTGGCGGGATCGGAGCCGCTACGCCGAAACATGGTGGGACCGGAACACAACACGCGGATACGTTTGGCTGGACGCGAAACCCGAGAACTTAACTAACGTGTCGGCTTATATCCCGTACCGGGTGTCGGGGAACTGGACCCGGTTCAAGTACCGCCACTCGCAGTCGGCGGTCCGGATCTCCCGGGTCGTGGTGGACAGCTTCAACCTCCGGCTGCCTAACGTGAGGTGGTTCGTGATGGGAGACGACGACACGGTGTTCTTCCCCCACAACTTGGTCTCCGTGCTGTCACGTTACGACCATAACCGGATGTACTACATTGGCGGGAACTCGGAGAGCGTCGAGCAGGACGTGATGCACGCGTACGACATGGCGTTCGGCGGCGGCGGGTTCGCCATCAGCCACAAACTGGCGGCGCGTCTGGCGGAGCTGATGGACGGGTGTTTGGACCGGTACTACAACATGTACGGCTCCGATCAGAGGGTGTGGGCCTGCGTGAGCGAGACGGGTGTGCCTCTCACGAAGCTGGGCGGGTTCCACCAGTTTGACATCAGAGGTGATCCTTATGGTGTTTTAGCGGCTCACCCATTGGCACCACTATTGTCCCTTCACCACATTGACGCCTTGGCACCCATTTTCCCCAACCAGACCCATCTTGGCTCGATCAAGTCCCTCGTCCATGCATACCGGGTTGACCCACCTCGGATCCTACAACAAAGTGTCTGCTATGACCGGAGGCGTAAATGGACAGTGTCCATTTCATGGGGCTACACCCTTCAGCTTTACCCCTCAATGGTGTCGGCTCTTGATCTTCGAAGGCCGTTGCGAACGTTCAAGACGTGGCGGAGTTGGGCTGATGGACCCTTCACGTTCAATACCCGACCAGTGAGTTCCAACCCGTGTGAGCGGCCAATCACTTATTTTTTGGAGCATGTTAAGGACGGCAAGAGTGGGAATACTTTGACTACTTACAAGAGGTTCGGTCATAAAGAGAGGGAATGTAATGGAACAGACTATCATCATGCAATGGCAATGCAGAGGATCGTAGTCCTCTCAAGGAAGATGGACCCTCAGTACTGGACAAAGGAGCAGGCTCCGCGTAGACAGTGCTGCGAGATTAAGAACCGTGCAAGCTTAAGAGGCGGAACGATGATGATTAAAATTAGGAGATGTAGACCCTCGGAATCTATAACAATATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF604

Protein Analysis

511

Amino Acids

58.52

Weight (kDa)

9.72

Isoelectric Point (pI)

51.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Fringe	PF02434	96 - 292	9e-17	Fringe-like
DUF604	PF04646	227 - 482	1.4e-104	Protein of unknown function, DUF604

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004645)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G11420
fragaria_vesca	FvH4_7g23010 FvH4_7g23010 FvH4_7g23010 FvH4_7g23010 FvH4_7g23030
malus_domestica	MD01G1138900.v1.1 MD07G1203200.v1.1
prunus_persica	Prupe.2G239400_v2.0.a1
pyrus_communis	pycom07g19010
rosa_chinensis	RchiOBHm_Chr1g0368251 RchiOBHm_Chr1g0368271
rosa_laevigata	RLG00000027225 RLG00000027226
rosa_multiflora	Rmu_co8138488.1_g000001 Rmu_sc0006033.1_g000010 Rmu_sc0006033.1_g000013 Rmu_sc0021728.1_g000001
rosa_roxburghii	Rroxscaffold_4G00288720
rosa_rugosa	Rorug01G0339800
rosa_samantha	Rh1AG347100 Rh1AG347200 Rh1BG310100 Rh1BG310200 Rh1CG325500 Rh1CG325600 Rh1DG341900 Rh1DG342000
rosa_wichuraiana	Rw0G001020 Rw1G030890 Rw1G030900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	273
AccB1I	GGYRCC	2 cut(s)	925, 961
AccB7I	CCANNNNNTGG	3 cut(s)	607, 742, 1095
AccBSI	CCGCTC	2 cut(s)	222, 1240
AccI	GTMKAC	3 cut(s)	273, 1435, 1507
AccII	CGCG	7 cut(s)	117, 143, 390, 410, 695, 751, 1432
AccIII	TCCGGA	1 cut(s)	507
AclI	AACGTT	1 cut(s)	1163
AclWI	GGATC	6 cut(s)	351, 518, 887, 1033, 1046, 1382
AcoI	YGGCCR	1 cut(s)	1241
AcuI	CTGAAG	2 cut(s)	295, 1094
AcvI	CACGTG	1 cut(s)	336
AcyI	GRCGYC	2 cut(s)	270, 954
AfaI	GTAC	7 cut(s)	452, 485, 647, 698, 788, 800, 1409
AfiI	CCNNNNNNNGG	9 cut(s)	366, 454, 460, 523, 607, 742, 813, 1095, 1126
AflII	CTTAAG	1 cut(s)	1468
AflIII	ACRYGT	4 cut(s)	333, 432, 693, 795
AgeI	ACCGGT	1 cut(s)	783
AgsI	TTSAA	4 cut(s)	481, 538, 1168, 1207
AjiI	CACGTC	2 cut(s)	685, 1173
AluBI	AGCT	8 cut(s)	25, 52, 324, 534, 763, 859, 1114, 1467
AluI	AGCT	8 cut(s)	25, 52, 324, 534, 763, 859, 1114, 1467
Alw26I	GTCTC	3 cut(s)	570, 616, 830
AlwI	GGATC	6 cut(s)	351, 518, 887, 1033, 1046, 1382
Ama87I	CYCGRG	2 cut(s)	416, 516
Aor13HI	TCCGGA	1 cut(s)	507
AoxI	GGCC	3 cut(s)	822, 1151, 1241
ApeKI	GCWGC	6 cut(s)	22, 49, 108, 321, 547, 1443
ArsI	GACNNNNNNTTYG	2 cut(s)	692, 724
AsiGI	ACCGGT	1 cut(s)	783
AspLEI	GCGC	2 cut(s)	117, 751
AspS9I	GGNCC	8 cut(s)	103, 373, 471, 505, 781, 822, 1193, 1399
AsuC2I	CCSGG	5 cut(s)	455, 475, 517, 518, 1022
AsuHPI	GGTGA	3 cut(s)	902, 908, 935
AsuII	TTCGAA	1 cut(s)	1147
AvaI	CYCGRG	2 cut(s)	416, 516
AvaII	GGWCC	7 cut(s)	103, 373, 471, 505, 781, 1193, 1399
BamHI	GGATCC	1 cut(s)	1038
BanI	GGYRCC	2 cut(s)	925, 961
BbrPI	CACGTG	1 cut(s)	336
BbvI	GCAGC	6 cut(s)	34, 61, 95, 333, 534, 1430
BccI	CCATC	7 cut(s)	242, 565, 737, 760, 993, 1184, 1390
BceAI	ACGGC	3 cut(s)	817, 1138, 1291
BciVI	GTATCC	1 cut(s)	386
BcnI	CCSGG	5 cut(s)	455, 475, 517, 518, 1022
BcoDI	GTCTC	3 cut(s)	570, 616, 830
BfrI	CTTAAG	1 cut(s)	1468
BfuI	GTATCC	1 cut(s)	386
BmcAI	AGTACT	1 cut(s)	1409
Bme1390I	CCNGG	5 cut(s)	455, 475, 517, 518, 1022
Bme18I	GGWCC	7 cut(s)	103, 373, 471, 505, 781, 1193, 1399
BmeT110I	CYCGRG	2 cut(s)	416, 516
BmgBI	CACGTC	2 cut(s)	685, 1173
BmgT120I	GGNCC	8 cut(s)	103, 373, 471, 505, 781, 822, 1193, 1399
BmrFI	CCNGG	5 cut(s)	455, 475, 517, 518, 1022
BmsI	GCATC	2 cut(s)	324, 678
Bpu14I	TTCGAA	1 cut(s)	1147
BpuEI	CTTGAG	1 cut(s)	1372
BpuMI	CCSGG	5 cut(s)	455, 475, 517, 518, 1022
BsaAI	YACGTR	1 cut(s)	336
BsaHI	GRCGYC	2 cut(s)	270, 954
BsaI	GGTCTC	1 cut(s)	616
BsaJI	CCNNGG	6 cut(s)	66, 90, 516, 957, 1034, 1512
BsaWI	WCCGGW	5 cut(s)	375, 507, 639, 783, 1065
BsaXI	ACNNNNNCTCC	2 cut(s)	596, 626
Bsc4I	CCNNNNNNNGG	9 cut(s)	366, 454, 460, 523, 607, 742, 813, 1095, 1126
Bse118I	RCCGGY	3 cut(s)	12, 39, 783
Bse1I	ACTGG	6 cut(s)	194, 473, 747, 874, 1217, 1415
Bse3DI	GCAATG	3 cut(s)	74, 1365, 1371
BseAI	TCCGGA	1 cut(s)	507
BseDI	CCNNGG	6 cut(s)	66, 90, 516, 957, 1034, 1512
BseGI	GGATG	2 cut(s)	126, 648
BseLI	CCNNNNNNNGG	9 cut(s)	366, 454, 460, 523, 607, 742, 813, 1095, 1126
BseMI	GCAATG	3 cut(s)	74, 1365, 1371
BseMII	CTCAG	1 cut(s)	1418
BseNI	ACTGG	6 cut(s)	194, 473, 747, 874, 1217, 1415
BseRI	GAGGAG	2 cut(s)	191, 232
BseXI	GCAGC	6 cut(s)	34, 61, 95, 333, 534, 1430
BseYI	CCCAGC	1 cut(s)	859
Bsh1236I	CGCG	7 cut(s)	117, 143, 390, 410, 695, 751, 1432
Bsh1285I	CGRYCG	1 cut(s)	208
BshFI	GGCC	3 cut(s)	824, 1153, 1243
BshNI	GGYRCC	2 cut(s)	925, 961
BshTI	ACCGGT	1 cut(s)	783
BsiEI	CGRYCG	1 cut(s)	208
BsiHKCI	CYCGRG	2 cut(s)	416, 516
BsiWI	CGTACG	1 cut(s)	696
BslFI	GGGAC	4 cut(s)	135, 386, 922, 988
BslI	CCNNNNNNNGG	9 cut(s)	366, 454, 460, 523, 607, 742, 813, 1095, 1126
BsmAI	GTCTC	3 cut(s)	570, 616, 830
BsmBI	CGTCTC	2 cut(s)	570, 830
BsmFI	GGGAC	4 cut(s)	135, 386, 922, 988
BsnI	GGCC	3 cut(s)	824, 1153, 1243
Bso31I	GGTCTC	1 cut(s)	616
BsoBI	CYCGRG	2 cut(s)	416, 516
Bsp119I	TTCGAA	1 cut(s)	1147
Bsp13I	TCCGGA	1 cut(s)	507
Bsp143I	GATC	9 cut(s)	138, 343, 510, 808, 892, 996, 1038, 1141, 1374
BspANI	GGCC	3 cut(s)	824, 1153, 1243
BspCNI	CTCAG	1 cut(s)	1417
BspEI	TCCGGA	1 cut(s)	507
BspFNI	CGCG	7 cut(s)	117, 143, 390, 410, 695, 751, 1432
BspPI	GGATC	6 cut(s)	351, 518, 887, 1033, 1046, 1382
BspT104I	TTCGAA	1 cut(s)	1147
BspT107I	GGYRCC	2 cut(s)	925, 961
BspTI	CTTAAG	1 cut(s)	1468
BspTNI	GGTCTC	1 cut(s)	616
BsrBI	CCGCTC	2 cut(s)	222, 1240
BsrDI	GCAATG	3 cut(s)	74, 1365, 1371
BsrFI	RCCGGY	3 cut(s)	12, 39, 783
BsrI	ACTGG	6 cut(s)	194, 473, 747, 874, 1217, 1415
BssAI	RCCGGY	3 cut(s)	12, 39, 783
BssECI	CCNNGG	6 cut(s)	66, 90, 516, 957, 1034, 1512
BssMI	GATC	9 cut(s)	138, 343, 510, 808, 892, 996, 1038, 1141, 1374
BssNI	GRCGYC	2 cut(s)	270, 954
BssT1I	CCWWGG	3 cut(s)	66, 90, 957
Bst4CI	ACNGT	4 cut(s)	589, 1084, 1440, 1460
Bst6I	CTCTTC	2 cut(s)	181, 314
BstACI	GRCGYC	2 cut(s)	270, 954
BstAFI	CTTAAG	1 cut(s)	1468
BstBAI	YACGTR	1 cut(s)	336
BstBI	TTCGAA	1 cut(s)	1147
BstC8I	GCNNGC	5 cut(s)	113, 693, 826, 1425, 1465
BstDEI	CTNAG	1 cut(s)	1404
BstF5I	GGATG	2 cut(s)	126, 648
BstFNI	CGCG	7 cut(s)	117, 143, 390, 410, 695, 751, 1432
BstHHI	GCGC	2 cut(s)	117, 751
BstKTI	GATC	9 cut(s)	141, 346, 513, 811, 895, 999, 1041, 1144, 1377
BstMAI	GTCTC	3 cut(s)	570, 616, 830
BstMBI	GATC	9 cut(s)	138, 343, 510, 808, 892, 996, 1038, 1141, 1374
BstMCI	CGRYCG	1 cut(s)	208
BstMWI	GCNNNNNNNGC	6 cut(s)	114, 149, 321, 755, 1429, 1473
BstNSI	RCATGY	3 cut(s)	115, 799, 1268
BstSCI	CCNGG	5 cut(s)	453, 473, 515, 516, 1020
BstUI	CGCG	7 cut(s)	117, 143, 390, 410, 695, 751, 1432
BstV1I	GCAGC	6 cut(s)	34, 61, 95, 333, 534, 1430
BstX2I	RGATCY	2 cut(s)	510, 1038
BstYI	RGATCY	2 cut(s)	510, 1038
BsuI	GTATCC	1 cut(s)	386
BsuRI	GGCC	3 cut(s)	824, 1153, 1243
BtrI	CACGTC	2 cut(s)	685, 1173
BtsCI	GGATG	2 cut(s)	126, 648
BtsIMutI	CAGTG	4 cut(s)	187, 1089, 1224, 1445
Cac8I	GCNNGC	5 cut(s)	113, 693, 826, 1425, 1465
CfoI	GCGC	2 cut(s)	117, 751
Cfr10I	RCCGGY	3 cut(s)	12, 39, 783
Cfr13I	GGNCC	8 cut(s)	103, 373, 471, 505, 781, 822, 1193, 1399
Cfr9I	CCCGGG	1 cut(s)	516
CpoI	CGGWCCG	1 cut(s)	505
CseI	GACGC	5 cut(s)	132, 416, 661, 740, 962
Csp6I	GTAC	7 cut(s)	451, 484, 646, 697, 787, 799, 1408
CspAI	ACCGGT	1 cut(s)	783
CspI	CGGWCCG	1 cut(s)	505
CviAII	CATG	8 cut(s)	112, 366, 703, 796, 1013, 1095, 1265, 1355
CviQI	GTAC	7 cut(s)	451, 484, 646, 697, 787, 799, 1408
DdeI	CTNAG	1 cut(s)	1404
DpnI	GATC	9 cut(s)	140, 345, 512, 810, 894, 998, 1040, 1143, 1376
DpnII	GATC	9 cut(s)	138, 343, 510, 808, 892, 996, 1038, 1141, 1374
EaeI	YGGCCR	1 cut(s)	1241
Eam1104I	CTCTTC	2 cut(s)	181, 314
EarI	CTCTTC	2 cut(s)	181, 314
EciI	GGCGGA	5 cut(s)	157, 214, 773, 1192, 1491
Eco130I	CCWWGG	3 cut(s)	66, 90, 957
Eco31I	GGTCTC	1 cut(s)	616
Eco47I	GGWCC	7 cut(s)	103, 373, 471, 505, 781, 1193, 1399
Eco57I	CTGAAG	2 cut(s)	295, 1094
Eco72I	CACGTG	1 cut(s)	336
Eco88I	CYCGRG	2 cut(s)	416, 516
EcoT14I	CCWWGG	3 cut(s)	66, 90, 957
EcoT22I	ATGCAT	1 cut(s)	1018
ErhI	CCWWGG	3 cut(s)	66, 90, 957
Esp3I	CGTCTC	2 cut(s)	570, 830
FaeI	CATG	8 cut(s)	115, 369, 706, 799, 1016, 1098, 1268, 1358
FaqI	GGGAC	4 cut(s)	135, 386, 922, 988
FatI	CATG	8 cut(s)	111, 365, 702, 795, 1012, 1094, 1264, 1354
FauI	CCCGC	5 cut(s)	227, 333, 650, 713, 857
FblI	GTMKAC	3 cut(s)	273, 1435, 1507
FokI	GGATG	2 cut(s)	113, 655
GlaI	GCGC	2 cut(s)	116, 750
GsaI	CCCAGC	1 cut(s)	863
HaeIII	GGCC	3 cut(s)	824, 1153, 1243
HgaI	GACGC	5 cut(s)	132, 416, 661, 740, 962
HhaI	GCGC	2 cut(s)	117, 751
Hin1I	GRCGYC	2 cut(s)	270, 954
Hin1II	CATG	8 cut(s)	115, 369, 706, 799, 1016, 1098, 1268, 1358
Hin6I	GCGC	2 cut(s)	115, 749
HinP1I	GCGC	2 cut(s)	115, 749
HincII	GTYRAC	3 cut(s)	274, 331, 1027
HindII	GTYRAC	3 cut(s)	274, 331, 1027
HindIII	AAGCTT	1 cut(s)	1465
HinfI	GANTC	3 cut(s)	4, 123, 1517
HphI	GGTGA	3 cut(s)	902, 908, 935
Hpy166II	GTNNAC	6 cut(s)	274, 331, 529, 1027, 1436, 1508
Hpy188I	TCNGA	9 cut(s)	63, 138, 348, 667, 808, 813, 887, 1038, 1516
Hpy188III	TCNNGA	5 cut(s)	508, 568, 853, 1139, 1168
Hpy8I	GTNNAC	6 cut(s)	274, 331, 529, 1027, 1436, 1508
Hpy99I	CGWCG	4 cut(s)	272, 275, 584, 677
HpyAV	CCTTC	5 cut(s)	181, 950, 1118, 1143, 1207
HpyCH4III	ACNGT	4 cut(s)	589, 1084, 1440, 1460
HpyCH4V	TGCA	6 cut(s)	111, 691, 1016, 1358, 1369, 1463
HpyF10VI	GCNNNNNNNGC	6 cut(s)	114, 149, 321, 755, 1429, 1473
HpyF3I	CTNAG	1 cut(s)	1404
Hsp92I	GRCGYC	2 cut(s)	270, 954
Hsp92II	CATG	8 cut(s)	115, 369, 706, 799, 1016, 1098, 1268, 1358
HspAI	GCGC	2 cut(s)	115, 749
Kpn2I	TCCGGA	1 cut(s)	507
Kzo9I	GATC	9 cut(s)	138, 343, 510, 808, 892, 996, 1038, 1141, 1374
Lsp1109I	GCAGC	6 cut(s)	34, 61, 95, 333, 534, 1430
LweI	GCATC	2 cut(s)	324, 678
MaeIII	GTNAC	2 cut(s)	621, 626
MalI	GATC	9 cut(s)	140, 345, 512, 810, 894, 998, 1040, 1143, 1376
MbiI	CCGCTC	2 cut(s)	222, 1240
MboI	GATC	9 cut(s)	138, 343, 510, 808, 892, 996, 1038, 1141, 1374
MboII	GAAGA	6 cut(s)	168, 229, 301, 586, 1136, 1405
MflI	RGATCY	2 cut(s)	510, 1038
MluCI	AATT	1 cut(s)	1494
MluI	ACGCGT	1 cut(s)	693
MlyI	GAGTC	2 cut(s)	13, 117
MmeI	TCCRAC	3 cut(s)	24, 86, 1251
Mph1103I	ATGCAT	1 cut(s)	1018
MroI	TCCGGA	1 cut(s)	507
MseI	TTAA	5 cut(s)	425, 1269, 1452, 1469, 1491
MslI	CAYNNNNRTG	1 cut(s)	116
MspA1I	CMGCKG	1 cut(s)	108
MspCI	CTTAAG	1 cut(s)	1468
MspR9I	CCNGG	5 cut(s)	455, 475, 517, 518, 1022
MvnI	CGCG	7 cut(s)	117, 143, 390, 410, 695, 751, 1432
MwoI	GCNNNNNNNGC	6 cut(s)	114, 149, 321, 755, 1429, 1473
NciI	CCSGG	5 cut(s)	455, 475, 517, 518, 1022
NdeII	GATC	9 cut(s)	138, 343, 510, 808, 892, 996, 1038, 1141, 1374
NlaIII	CATG	8 cut(s)	115, 369, 706, 799, 1016, 1098, 1268, 1358
NmuCI	GTSAC	1 cut(s)	621
NsiI	ATGCAT	1 cut(s)	1018
NspI	RCATGY	3 cut(s)	115, 799, 1268
NspV	TTCGAA	1 cut(s)	1147
PaeI	GCATGC	1 cut(s)	115
PciI	ACATGT	1 cut(s)	795
PcsI	WCGNNNNNNNCGW	5 cut(s)	276, 324, 414, 681, 1169
PfeI	GAWTC	1 cut(s)	1517
Pfl23II	CGTACG	1 cut(s)	696
PflFI	GACNNNGTC	1 cut(s)	1084
PflMI	CCANNNNNTGG	3 cut(s)	607, 742, 1095
PinAI	ACCGGT	1 cut(s)	783
PleI	GAGTC	2 cut(s)	12, 117
PmaCI	CACGTG	1 cut(s)	336
PmlI	CACGTG	1 cut(s)	336
PpsI	GAGTC	2 cut(s)	12, 117
Ppu21I	YACGTR	1 cut(s)	336
PscI	ACATGT	1 cut(s)	795
Psp1406I	AACGTT	1 cut(s)	1163
PspCI	CACGTG	1 cut(s)	336
PspFI	CCCAGC	1 cut(s)	859
PspLI	CGTACG	1 cut(s)	696
PspPI	GGNCC	8 cut(s)	103, 373, 471, 505, 781, 822, 1193, 1399
PsuI	RGATCY	2 cut(s)	510, 1038
PsyI	GACNNNGTC	1 cut(s)	1084
RsaI	GTAC	7 cut(s)	452, 485, 647, 698, 788, 800, 1409
RsaNI	GTAC	7 cut(s)	451, 484, 646, 697, 787, 799, 1408
RseI	CAYNNNNRTG	1 cut(s)	116
Rsr2I	CGGWCCG	1 cut(s)	505
RsrII	CGGWCCG	1 cut(s)	505
SalI	GTCGAC	1 cut(s)	272
SaqAI	TTAA	5 cut(s)	425, 1269, 1452, 1469, 1491
Sau3AI	GATC	9 cut(s)	138, 343, 510, 808, 892, 996, 1038, 1141, 1374
Sau96I	GGNCC	8 cut(s)	103, 373, 471, 505, 781, 822, 1193, 1399
ScaI	AGTACT	1 cut(s)	1409
SchI	GAGTC	2 cut(s)	13, 117
ScrFI	CCNGG	5 cut(s)	455, 475, 517, 518, 1022
SfaNI	GCATC	2 cut(s)	324, 678
SfuI	TTCGAA	1 cut(s)	1147
SinI	GGWCC	7 cut(s)	103, 373, 471, 505, 781, 1193, 1399
SmaI	CCCGGG	1 cut(s)	518
SmiMI	CAYNNNNRTG	1 cut(s)	116
SmlI	CTYRAG	2 cut(s)	1387, 1468
SmoI	CTYRAG	2 cut(s)	1387, 1468
SphI	GCATGC	1 cut(s)	115
Sse9I	AATT	1 cut(s)	1494
StyD4I	CCNGG	5 cut(s)	453, 473, 515, 516, 1020
StyI	CCWWGG	3 cut(s)	66, 90, 957
TaaI	ACNGT	4 cut(s)	589, 1084, 1440, 1460
TaqI	TCGA	7 cut(s)	7, 34, 204, 273, 675, 995, 1147
TaqII	GACCGA	2 cut(s)	222, 1304
TasI	AATT	1 cut(s)	1494
TatI	WGTACW	2 cut(s)	645, 1407
TauI	GCSGC	6 cut(s)	354, 717, 720, 749, 914, 1243
TfiI	GAWTC	1 cut(s)	1517
Tru1I	TTAA	5 cut(s)	425, 1269, 1452, 1469, 1491
Tru9I	TTAA	5 cut(s)	425, 1269, 1452, 1469, 1491
TscAI	CASTG	4 cut(s)	194, 1089, 1224, 1445
TseFI	GTSAC	1 cut(s)	621
TseI	GCWGC	6 cut(s)	22, 49, 108, 321, 547, 1443
Tsp45I	GTSAC	1 cut(s)	621
TspDTI	ATGAA	1 cut(s)	1083
TspGWI	ACGGA	2 cut(s)	316, 604
TspMI	CCCGGG	1 cut(s)	516
TspRI	CASTG	4 cut(s)	194, 1089, 1224, 1445
Tth111I	GACNNNGTC	1 cut(s)	1084
Van91I	CCANNNNNTGG	3 cut(s)	607, 742, 1095
Vha464I	CTTAAG	1 cut(s)	1468
VpaK11BI	GGWCC	7 cut(s)	103, 373, 471, 505, 781, 1193, 1399
XceI	RCATGY	3 cut(s)	115, 799, 1268
XcmI	CCANNNNNNNNNTGG	2 cut(s)	97, 986
XmaI	CCCGGG	1 cut(s)	516
XmiI	GTMKAC	3 cut(s)	273, 1435, 1507
ZraI	GACGTC	1 cut(s)	271
ZrmI	AGTACT	1 cut(s)	1409
Zsp2I	ATGCAT	1 cut(s)	1018

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.