Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0004645

Physical Location & Seq

Genomic Coordinates Forward (+)

9407564 .. 9411500

Gene Structure 3937 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00288720.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1512 bp

ATGAGTCGAAGCCGATTGGAGCAGCTAATAAGTCGAAGCCGGTTGGAGCAGCTTAAACCTCCGACCTTGGTGGCATTGCCGGAAAAAACCAAGGCTTTATTGGTCCGCTGCATGCGCGTGGGACTCATCCTCTGTCTGATCGCGTCAATCGCACTCGCCCTCTGCTCCGCCTTCTCTTCCCAATCCCACTGGTTCCCCCTCCTCGACCGAAACCGAACCCGCTCCGCCACCTCCATCTTCTCCACCACCACCGACGTCGACAGCGAACCCCCCACCAACATCTCCCACATTCTCTTCGGCATCGGCAGCTCCGTCAACACGTGGCGCGATCGGAGCCGCTACTCCGAAACATGGTGGGACCGGAACACAACACGCGGATACGTTTGGCTGGACGCGAAACCCGAGAACTTAACTAACGTCTCCGCTTATATCCCGTACCAGGTGTCGGGAAACTGGACCCGGTTCAAGTACAGGCACTCGCAGTCGGCGGTCAGGATCGCCCGGGTCGTGGTGGACAGCTTTAACCTCCAGCTGCCGAACGTGAGGTGGTTCGTGATGGGAGATGACGACACGGTGTTCTTCCCCCACAACTTGGTCTCGGTGCTGTCACGTTACGACCATAACCGGATGTACTACATTGGCGGGAACTCGGAGAGCGTCGAGCAGGACTTGATGCACGCGTACGACATGGCGTTCGGCGGCGGCGGGTTCGCCATCAGCTACAAACTGGCGGCGCGTCTGGCGGAGCTGATGGACGGGTGTTTGGACCGGTACTACAACATGTACGGCTCCGATCAGAGGGTGTGGGCCTGTGTGAGCGAGACGGGTGTGCCTTTCACGAAGCTGGGTGGGTTCCACCAGTTTGACATCAGAGGTGATCCTTATGGTGTTTTAGCGGCTCACCCATTGGCACCACTATTGTCCCTTCACCACATTGACGCCTTGGCACCCATTTTCCCCAACCAGACCCATCTAGACTCGATCAAGTCCCTCGTCCATGCATACCGGGTTGACCCACCTCGGATCCTACAACAAAGTATCTGCTATGACCGGAGGCGTAAATGGACAGTGTCCATTTCATGGGGCTACACCCTTCAGCTCTACCTCTCAATGGTGTCGGCTCTTGATCTTCGAAGGCCGTTGCAAACGTTCAAGACGTGGCGGAGTAGGGCTGATGGACCCTTCACGTTCAATACCCGACCAGTGAGTTCCAACCCGTGTGAGCGGCCAATCACTTATTTCTTGGAGCATGTCAAGGACGGCAAGAGTGGGAATACTTTGACCACTTACAAGAGGTTCGGTCATAAAGGGAGGGAATGTAATAGAACAGACTATCATCATGCAATGGCAATGCAGAGGATTGTAGTCTTCTCAAGGAAGATGGACCCTCAGTACTGGACAAAGGCTCCGCGTAGACAGTGCAGCGAGATTAAGAATCGTGCAAGCTTAAGGGGCGGAACGATGATGATTAAAATTAGGAGATGTAGACCCTCGGAATCTATAACAATATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF604

Protein Analysis

503

Amino Acids

57.84

Weight (kDa)

9.74

Isoelectric Point (pI)

52.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Fringe	PF02434	92 - 287	1e-15	Fringe-like
DUF604	PF04646	222 - 474	5.8e-105	Protein of unknown function, DUF604

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004645)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G11420
fragaria_vesca	FvH4_7g23010 FvH4_7g23010 FvH4_7g23010 FvH4_7g23010 FvH4_7g23030
malus_domestica	MD01G1138900.v1.1 MD07G1203200.v1.1
prunus_persica	Prupe.2G239400_v2.0.a1
pyrus_communis	pycom07g19010
rosa_chinensis	RchiOBHm_Chr1g0368251 RchiOBHm_Chr1g0368271
rosa_laevigata	RLG00000027225 RLG00000027226
rosa_multiflora	Rmu_co8138488.1_g000001 Rmu_sc0006033.1_g000010 Rmu_sc0006033.1_g000013 Rmu_sc0021728.1_g000001
rosa_roxburghii	Rroxscaffold_4G00288720
rosa_rugosa	Rorug01G0339800
rosa_samantha	Rh1AG347100 Rh1AG347200 Rh1BG310100 Rh1BG310200 Rh1CG325500 Rh1CG325600 Rh1DG341900 Rh1DG342000
rosa_wichuraiana	Rw0G001020 Rw1G030890 Rw1G030900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	258
AccB1I	GGYRCC	2 cut(s)	910, 946
AccB7I	CCANNNNNTGG	2 cut(s)	592, 1080
AccBSI	CCGCTC	2 cut(s)	222, 1225
AccI	GTMKAC	3 cut(s)	258, 1414, 1486
AccII	CGCG	8 cut(s)	117, 143, 327, 375, 395, 680, 736, 1411
AclI	AACGTT	1 cut(s)	1148
AclWI	GGATC	4 cut(s)	503, 872, 1018, 1031
AcoI	YGGCCR	1 cut(s)	1226
AcuI	CTGAAG	1 cut(s)	1079
AcvI	CACGTG	1 cut(s)	321
AcyI	GRCGYC	2 cut(s)	255, 939
AfaI	GTAC	7 cut(s)	437, 470, 632, 683, 773, 785, 1394
AfiI	CCNNNNNNNGG	8 cut(s)	351, 439, 445, 508, 592, 798, 1080, 1111
AflII	CTTAAG	1 cut(s)	1447
AflIII	ACRYGT	3 cut(s)	318, 678, 780
AgeI	ACCGGT	1 cut(s)	768
AgsI	TTSAA	3 cut(s)	466, 1153, 1192
AjiI	CACGTC	1 cut(s)	1158
AjnI	CCWGG	1 cut(s)	438
Alw26I	GTCTC	3 cut(s)	424, 601, 815
AlwI	GGATC	4 cut(s)	503, 872, 1018, 1031
Ama87I	CYCGRG	2 cut(s)	401, 501
AoxI	GGCC	3 cut(s)	807, 1136, 1226
ApeKI	GCWGC	6 cut(s)	22, 49, 108, 306, 532, 1422
ArsI	GACNNNNNNTTYG	2 cut(s)	677, 709
AsiGI	ACCGGT	1 cut(s)	768
AspLEI	GCGC	3 cut(s)	117, 327, 736
AspS9I	GGNCC	7 cut(s)	103, 358, 456, 766, 807, 1178, 1384
AsuC2I	CCSGG	4 cut(s)	460, 502, 503, 1007
AsuHPI	GGTGA	3 cut(s)	887, 893, 920
AsuII	TTCGAA	1 cut(s)	1132
AvaI	CYCGRG	2 cut(s)	401, 501
AvaII	GGWCC	6 cut(s)	103, 358, 456, 766, 1178, 1384
BamHI	GGATCC	1 cut(s)	1023
BanI	GGYRCC	2 cut(s)	910, 946
BbrPI	CACGTG	1 cut(s)	321
BbsI	GAAGAC	1 cut(s)	1360
BbvI	GCAGC	6 cut(s)	34, 61, 95, 318, 519, 1434
BccI	CCATC	7 cut(s)	242, 550, 722, 745, 978, 1169, 1375
BceAI	ACGGC	3 cut(s)	802, 1123, 1276
BciT130I	CCWGG	1 cut(s)	440
BciVI	GTATCC	1 cut(s)	371
BcnI	CCSGG	4 cut(s)	460, 502, 503, 1007
BcoDI	GTCTC	3 cut(s)	424, 601, 815
BfaI	CTAG	1 cut(s)	974
BfrI	CTTAAG	1 cut(s)	1447
BfuI	GTATCC	1 cut(s)	371
BmcAI	AGTACT	1 cut(s)	1394
Bme1390I	CCNGG	5 cut(s)	440, 460, 502, 503, 1007
Bme18I	GGWCC	6 cut(s)	103, 358, 456, 766, 1178, 1384
BmeT110I	CYCGRG	2 cut(s)	401, 501
BmgBI	CACGTC	1 cut(s)	1158
BmgT120I	GGNCC	7 cut(s)	103, 358, 456, 766, 807, 1178, 1384
BmrFI	CCNGG	5 cut(s)	440, 460, 502, 503, 1007
BmsI	GCATC	2 cut(s)	309, 663
BpiI	GAAGAC	1 cut(s)	1360
BpmI	CTGGAG	1 cut(s)	512
Bpu14I	TTCGAA	1 cut(s)	1132
BpuEI	CTTGAG	1 cut(s)	1357
BpuMI	CCSGG	4 cut(s)	460, 502, 503, 1007
BsaAI	YACGTR	1 cut(s)	321
BsaHI	GRCGYC	2 cut(s)	255, 939
BsaI	GGTCTC	1 cut(s)	601
BsaJI	CCNNGG	6 cut(s)	66, 90, 501, 942, 1019, 1491
BsaWI	WCCGGW	4 cut(s)	360, 624, 768, 1050
BsaXI	ACNNNNNCTCC	4 cut(s)	1303, 1333, 1390, 1420
Bsc4I	CCNNNNNNNGG	8 cut(s)	351, 439, 445, 508, 592, 798, 1080, 1111
Bse118I	RCCGGY	2 cut(s)	39, 768
Bse1I	ACTGG	6 cut(s)	194, 458, 732, 859, 1202, 1400
Bse3DI	GCAATG	3 cut(s)	74, 1350, 1356
BseBI	CCWGG	1 cut(s)	440
BseDI	CCNNGG	6 cut(s)	66, 90, 501, 942, 1019, 1491
BseGI	GGATG	2 cut(s)	126, 633
BseLI	CCNNNNNNNGG	8 cut(s)	351, 439, 445, 508, 592, 798, 1080, 1111
BseMI	GCAATG	3 cut(s)	74, 1350, 1356
BseMII	CTCAG	1 cut(s)	1403
BseNI	ACTGG	6 cut(s)	194, 458, 732, 859, 1202, 1400
BseRI	GAGGAG	1 cut(s)	191
BseXI	GCAGC	6 cut(s)	34, 61, 95, 318, 519, 1434
BseYI	CCCAGC	1 cut(s)	844
BsgI	GTGCAG	1 cut(s)	1441
Bsh1236I	CGCG	8 cut(s)	117, 143, 327, 375, 395, 680, 736, 1411
Bsh1285I	CGRYCG	2 cut(s)	208, 331
BshFI	GGCC	3 cut(s)	809, 1138, 1228
BshNI	GGYRCC	2 cut(s)	910, 946
BshTI	ACCGGT	1 cut(s)	768
BsiEI	CGRYCG	2 cut(s)	208, 331
BsiHKCI	CYCGRG	2 cut(s)	401, 501
BsiSI	CCGG	9 cut(s)	40, 80, 361, 460, 502, 625, 769, 1006, 1051
BsiWI	CGTACG	1 cut(s)	681
BslFI	GGGAC	4 cut(s)	135, 371, 907, 973
BslI	CCNNNNNNNGG	8 cut(s)	351, 439, 445, 508, 592, 798, 1080, 1111
BsmAI	GTCTC	3 cut(s)	424, 601, 815
BsmBI	CGTCTC	2 cut(s)	424, 815
BsmFI	GGGAC	4 cut(s)	135, 371, 907, 973
BsnI	GGCC	3 cut(s)	809, 1138, 1228
Bso31I	GGTCTC	1 cut(s)	601
BsoBI	CYCGRG	2 cut(s)	401, 501
Bsp119I	TTCGAA	1 cut(s)	1132
Bsp143I	GATC	8 cut(s)	138, 328, 495, 793, 877, 981, 1023, 1126
BspANI	GGCC	3 cut(s)	809, 1138, 1228
BspCNI	CTCAG	1 cut(s)	1402
BspFNI	CGCG	8 cut(s)	117, 143, 327, 375, 395, 680, 736, 1411
BspPI	GGATC	4 cut(s)	503, 872, 1018, 1031
BspT104I	TTCGAA	1 cut(s)	1132
BspT107I	GGYRCC	2 cut(s)	910, 946
BspTI	CTTAAG	1 cut(s)	1447
BspTNI	GGTCTC	1 cut(s)	601
BsrBI	CCGCTC	2 cut(s)	222, 1225
BsrDI	GCAATG	3 cut(s)	74, 1350, 1356
BsrFI	RCCGGY	2 cut(s)	39, 768
BsrI	ACTGG	6 cut(s)	194, 458, 732, 859, 1202, 1400
BssAI	RCCGGY	2 cut(s)	39, 768
BssECI	CCNNGG	6 cut(s)	66, 90, 501, 942, 1019, 1491
BssMI	GATC	8 cut(s)	138, 328, 495, 793, 877, 981, 1023, 1126
BssNI	GRCGYC	2 cut(s)	255, 939
BssT1I	CCWWGG	3 cut(s)	66, 90, 942
Bst2UI	CCWGG	1 cut(s)	440
Bst4CI	ACNGT	3 cut(s)	574, 1069, 1419
Bst6I	CTCTTC	2 cut(s)	181, 299
BstACI	GRCGYC	2 cut(s)	255, 939
BstAFI	CTTAAG	1 cut(s)	1447
BstBAI	YACGTR	1 cut(s)	321
BstBI	TTCGAA	1 cut(s)	1132
BstC8I	GCNNGC	3 cut(s)	113, 678, 1444
BstDEI	CTNAG	1 cut(s)	1389
BstF5I	GGATG	2 cut(s)	126, 633
BstFNI	CGCG	8 cut(s)	117, 143, 327, 375, 395, 680, 736, 1411
BstHHI	GCGC	3 cut(s)	117, 327, 736
BstKTI	GATC	8 cut(s)	141, 331, 498, 796, 880, 984, 1026, 1129
BstMAI	GTCTC	3 cut(s)	424, 601, 815
BstMBI	GATC	8 cut(s)	138, 328, 495, 793, 877, 981, 1023, 1126
BstMCI	CGRYCG	2 cut(s)	208, 331
BstMWI	GCNNNNNNNGC	6 cut(s)	114, 149, 306, 333, 740, 1452
BstNI	CCWGG	1 cut(s)	440
BstNSI	RCATGY	3 cut(s)	115, 784, 1253
BstSCI	CCNGG	5 cut(s)	438, 458, 500, 501, 1005
BstUI	CGCG	8 cut(s)	117, 143, 327, 375, 395, 680, 736, 1411
BstV1I	GCAGC	6 cut(s)	34, 61, 95, 318, 519, 1434
BstV2I	GAAGAC	1 cut(s)	1360
BstX2I	RGATCY	1 cut(s)	1023
BstYI	RGATCY	1 cut(s)	1023
BsuI	GTATCC	1 cut(s)	371
BsuRI	GGCC	3 cut(s)	809, 1138, 1228
BtrI	CACGTC	1 cut(s)	1158
BtsCI	GGATG	2 cut(s)	126, 633
BtsIMutI	CAGTG	4 cut(s)	187, 1074, 1209, 1424
Cac8I	GCNNGC	3 cut(s)	113, 678, 1444
CfoI	GCGC	3 cut(s)	117, 327, 736
Cfr10I	RCCGGY	2 cut(s)	39, 768
Cfr13I	GGNCC	7 cut(s)	103, 358, 456, 766, 807, 1178, 1384
Cfr9I	CCCGGG	1 cut(s)	501
CseI	GACGC	5 cut(s)	132, 401, 646, 725, 947
CsiI	ACCWGGT	1 cut(s)	438
Csp6I	GTAC	7 cut(s)	436, 469, 631, 682, 772, 784, 1393
CspAI	ACCGGT	1 cut(s)	768
CviAII	CATG	8 cut(s)	112, 351, 688, 781, 998, 1080, 1250, 1340
CviQI	GTAC	7 cut(s)	436, 469, 631, 682, 772, 784, 1393
DdeI	CTNAG	1 cut(s)	1389
DpnI	GATC	8 cut(s)	140, 330, 497, 795, 879, 983, 1025, 1128
DpnII	GATC	8 cut(s)	138, 328, 495, 793, 877, 981, 1023, 1126
EaeI	YGGCCR	1 cut(s)	1226
Eam1104I	CTCTTC	2 cut(s)	181, 299
EarI	CTCTTC	2 cut(s)	181, 299
EciI	GGCGGA	5 cut(s)	157, 214, 758, 1177, 1470
Eco130I	CCWWGG	3 cut(s)	66, 90, 942
Eco31I	GGTCTC	1 cut(s)	601
Eco47I	GGWCC	6 cut(s)	103, 358, 456, 766, 1178, 1384
Eco57I	CTGAAG	1 cut(s)	1079
Eco72I	CACGTG	1 cut(s)	321
Eco88I	CYCGRG	2 cut(s)	401, 501
EcoRII	CCWGG	1 cut(s)	438
EcoT14I	CCWWGG	3 cut(s)	66, 90, 942
EcoT22I	ATGCAT	1 cut(s)	1003
ErhI	CCWWGG	3 cut(s)	66, 90, 942
Esp3I	CGTCTC	2 cut(s)	424, 815
FaeI	CATG	8 cut(s)	115, 354, 691, 784, 1001, 1083, 1253, 1343
FaqI	GGGAC	4 cut(s)	135, 371, 907, 973
FatI	CATG	8 cut(s)	111, 350, 687, 780, 997, 1079, 1249, 1339
FauI	CCCGC	3 cut(s)	227, 635, 698
FblI	GTMKAC	3 cut(s)	258, 1414, 1486
FokI	GGATG	2 cut(s)	113, 640
FspBI	CTAG	1 cut(s)	974
GlaI	GCGC	3 cut(s)	116, 326, 735
GsaI	CCCAGC	1 cut(s)	848
GsuI	CTGGAG	1 cut(s)	512
HaeIII	GGCC	3 cut(s)	809, 1138, 1228
HapII	CCGG	9 cut(s)	40, 80, 361, 460, 502, 625, 769, 1006, 1051
HgaI	GACGC	5 cut(s)	132, 401, 646, 725, 947
HhaI	GCGC	3 cut(s)	117, 327, 736
Hin1I	GRCGYC	2 cut(s)	255, 939
Hin1II	CATG	8 cut(s)	115, 354, 691, 784, 1001, 1083, 1253, 1343
Hin6I	GCGC	3 cut(s)	115, 325, 734
HinP1I	GCGC	3 cut(s)	115, 325, 734
HincII	GTYRAC	3 cut(s)	259, 316, 1012
HindII	GTYRAC	3 cut(s)	259, 316, 1012
HindIII	AAGCTT	1 cut(s)	1444
HinfI	GANTC	5 cut(s)	4, 123, 977, 1435, 1496
HpaII	CCGG	9 cut(s)	40, 80, 361, 460, 502, 625, 769, 1006, 1051
HphI	GGTGA	3 cut(s)	887, 893, 920
Hpy166II	GTNNAC	6 cut(s)	259, 316, 514, 1012, 1415, 1487
Hpy188III	TCNNGA	7 cut(s)	447, 493, 553, 838, 974, 1124, 1153
Hpy8I	GTNNAC	6 cut(s)	259, 316, 514, 1012, 1415, 1487
Hpy99I	CGWCG	3 cut(s)	257, 260, 662
HpyAV	CCTTC	5 cut(s)	181, 935, 1103, 1128, 1192
HpyCH4III	ACNGT	3 cut(s)	574, 1069, 1419
HpyCH4IV	ACGT	9 cut(s)	255, 320, 381, 417, 540, 610, 1148, 1157, 1187
HpyCH4V	TGCA	8 cut(s)	111, 676, 1001, 1144, 1343, 1354, 1422, 1442
HpyF10VI	GCNNNNNNNGC	6 cut(s)	114, 149, 306, 333, 740, 1452
HpyF3I	CTNAG	1 cut(s)	1389
HpySE526I	ACGT	9 cut(s)	255, 320, 381, 417, 540, 610, 1148, 1157, 1187
Hsp92I	GRCGYC	2 cut(s)	255, 939
Hsp92II	CATG	8 cut(s)	115, 354, 691, 784, 1001, 1083, 1253, 1343
HspAI	GCGC	3 cut(s)	115, 325, 734
Kzo9I	GATC	8 cut(s)	138, 328, 495, 793, 877, 981, 1023, 1126
Lsp1109I	GCAGC	6 cut(s)	34, 61, 95, 318, 519, 1434
LweI	GCATC	2 cut(s)	309, 663
MabI	ACCWGGT	1 cut(s)	438
MaeI	CTAG	1 cut(s)	974
MaeII	ACGT	9 cut(s)	255, 320, 381, 417, 540, 610, 1148, 1157, 1187
MaeIII	GTNAC	2 cut(s)	606, 611
MalI	GATC	8 cut(s)	140, 330, 497, 795, 879, 983, 1025, 1128
MbiI	CCGCTC	2 cut(s)	222, 1225
MboI	GATC	8 cut(s)	138, 328, 495, 793, 877, 981, 1023, 1126
MboII	GAAGA	7 cut(s)	168, 229, 286, 571, 1121, 1360, 1390
MflI	RGATCY	1 cut(s)	1023
MluCI	AATT	1 cut(s)	1473
MluI	ACGCGT	1 cut(s)	678
MlyI	GAGTC	3 cut(s)	13, 117, 971
MmeI	TCCRAC	3 cut(s)	24, 86, 1236
Mph1103I	ATGCAT	1 cut(s)	1003
MseI	TTAA	6 cut(s)	54, 410, 522, 1431, 1448, 1470
MslI	CAYNNNNRTG	1 cut(s)	116
MspA1I	CMGCKG	2 cut(s)	108, 532
MspCI	CTTAAG	1 cut(s)	1447
MspI	CCGG	9 cut(s)	40, 80, 361, 460, 502, 625, 769, 1006, 1051
MspR9I	CCNGG	5 cut(s)	440, 460, 502, 503, 1007
MvaI	CCWGG	1 cut(s)	440
MvnI	CGCG	8 cut(s)	117, 143, 327, 375, 395, 680, 736, 1411
MwoI	GCNNNNNNNGC	6 cut(s)	114, 149, 306, 333, 740, 1452
NciI	CCSGG	4 cut(s)	460, 502, 503, 1007
NdeII	GATC	8 cut(s)	138, 328, 495, 793, 877, 981, 1023, 1126
NlaIII	CATG	8 cut(s)	115, 354, 691, 784, 1001, 1083, 1253, 1343
NmuCI	GTSAC	1 cut(s)	606
NsiI	ATGCAT	1 cut(s)	1003
NspI	RCATGY	3 cut(s)	115, 784, 1253
NspV	TTCGAA	1 cut(s)	1132
PaeI	GCATGC	1 cut(s)	115
PciI	ACATGT	1 cut(s)	780
PcsI	WCGNNNNNNNCGW	5 cut(s)	261, 309, 399, 504, 1154
PfeI	GAWTC	2 cut(s)	1435, 1496
Pfl23II	CGTACG	1 cut(s)	681
PflFI	GACNNNGTC	1 cut(s)	1069
PflMI	CCANNNNNTGG	2 cut(s)	592, 1080
PinAI	ACCGGT	1 cut(s)	768
Ple19I	CGATCG	1 cut(s)	331
PleI	GAGTC	3 cut(s)	12, 117, 971
PmaCI	CACGTG	1 cut(s)	321
PmlI	CACGTG	1 cut(s)	321
PpsI	GAGTC	3 cut(s)	12, 117, 971
Ppu21I	YACGTR	1 cut(s)	321
PscI	ACATGT	1 cut(s)	780
Psp1406I	AACGTT	1 cut(s)	1148
Psp6I	CCWGG	1 cut(s)	438
PspCI	CACGTG	1 cut(s)	321
PspFI	CCCAGC	1 cut(s)	844
PspGI	CCWGG	1 cut(s)	438
PspLI	CGTACG	1 cut(s)	681
PspPI	GGNCC	7 cut(s)	103, 358, 456, 766, 807, 1178, 1384
PsuI	RGATCY	1 cut(s)	1023
PsyI	GACNNNGTC	1 cut(s)	1069
PvuI	CGATCG	1 cut(s)	331
PvuII	CAGCTG	1 cut(s)	532
RsaI	GTAC	7 cut(s)	437, 470, 632, 683, 773, 785, 1394
RsaNI	GTAC	7 cut(s)	436, 469, 631, 682, 772, 784, 1393
RseI	CAYNNNNRTG	1 cut(s)	116
SalI	GTCGAC	1 cut(s)	257
SaqAI	TTAA	6 cut(s)	54, 410, 522, 1431, 1448, 1470
Sau3AI	GATC	8 cut(s)	138, 328, 495, 793, 877, 981, 1023, 1126
Sau96I	GGNCC	7 cut(s)	103, 358, 456, 766, 807, 1178, 1384
ScaI	AGTACT	1 cut(s)	1394
SchI	GAGTC	3 cut(s)	13, 117, 971
ScrFI	CCNGG	5 cut(s)	440, 460, 502, 503, 1007
SexAI	ACCWGGT	1 cut(s)	438
SfaNI	GCATC	2 cut(s)	309, 663
SfuI	TTCGAA	1 cut(s)	1132
SinI	GGWCC	6 cut(s)	103, 358, 456, 766, 1178, 1384
SmaI	CCCGGG	1 cut(s)	503
SmiMI	CAYNNNNRTG	1 cut(s)	116
SmlI	CTYRAG	2 cut(s)	1372, 1447
SmoI	CTYRAG	2 cut(s)	1372, 1447
SphI	GCATGC	1 cut(s)	115
Sse9I	AATT	1 cut(s)	1473
SspMI	CTAG	1 cut(s)	974
StyD4I	CCNGG	5 cut(s)	438, 458, 500, 501, 1005
StyI	CCWWGG	3 cut(s)	66, 90, 942
TaaI	ACNGT	3 cut(s)	574, 1069, 1419
TaiI	ACGT	9 cut(s)	258, 323, 384, 420, 543, 613, 1151, 1160, 1190
TaqI	TCGA	7 cut(s)	7, 34, 204, 258, 660, 980, 1132
TaqII	GACCGA	2 cut(s)	222, 1289
TasI	AATT	1 cut(s)	1473
TatI	WGTACW	3 cut(s)	468, 630, 1392
TauI	GCSGC	6 cut(s)	339, 702, 705, 734, 899, 1228
TfiI	GAWTC	2 cut(s)	1435, 1496
Tru1I	TTAA	6 cut(s)	54, 410, 522, 1431, 1448, 1470
Tru9I	TTAA	6 cut(s)	54, 410, 522, 1431, 1448, 1470
TscAI	CASTG	4 cut(s)	194, 1074, 1209, 1424
TseFI	GTSAC	1 cut(s)	606
TseI	GCWGC	6 cut(s)	22, 49, 108, 306, 532, 1422
Tsp45I	GTSAC	1 cut(s)	606
TspDTI	ATGAA	1 cut(s)	1068
TspGWI	ACGGA	1 cut(s)	301
TspMI	CCCGGG	1 cut(s)	501
TspRI	CASTG	4 cut(s)	194, 1074, 1209, 1424
Tth111I	GACNNNGTC	1 cut(s)	1069
Van91I	CCANNNNNTGG	2 cut(s)	592, 1080
Vha464I	CTTAAG	1 cut(s)	1447
VpaK11BI	GGWCC	6 cut(s)	103, 358, 456, 766, 1178, 1384
XbaI	TCTAGA	1 cut(s)	973
XceI	RCATGY	3 cut(s)	115, 784, 1253
XcmI	CCANNNNNNNNNTGG	1 cut(s)	97
XmaI	CCCGGG	1 cut(s)	501
XmiI	GTMKAC	3 cut(s)	258, 1414, 1486
XspI	CTAG	1 cut(s)	974
ZraI	GACGTC	1 cut(s)	256
ZrmI	AGTACT	1 cut(s)	1394
Zsp2I	ATGCAT	1 cut(s)	1003

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.