Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0004645

Physical Location & Seq

Genomic Coordinates Reverse (-)

56679675 .. 56683686

Gene Structure 4012 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG342000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1527 bp

ATGAGTCGAAGCCGATTGGAGCAGCTAATAAGTCGAAGCCGGTTGGAGCAGCTTAAACCTCCGACCTTGGTGGCATTGCCGGAAAAAACCAAGGCTTTATTGGTCCGCTGCATGCACGTGGGACTCATCCTCTGTCTGATCGGGTCAATCGCACTCGCCCTCTGCTCCGCCTTCTCTCCCCAATCCCACTGGTTCCCCCTCCTCGACCGAAACCGAACCCGCTCCGCCACCTCCATCTACTCCACCACCACCACCACCACCGACGTCGACAGCGAACCCCCCACCAACATCTCCCACATTCTCTTGAGCATCGGCAGCTCCGTCAACACGTGGCGCGATCGGAGCCGCTACGCCGAAACATGGTGGGACCGGAACACAACACGCGGATACGTTTGGATGGACGCGAAACCCGAGAACTTAACTAACGTCGCGGCTTATATCCCGTACCGGGTGTCGGGGAACTGGACCCGGTTCAAGTACAGCCACTCGCAGTCGGCGGTCCGGATCGCCCGGGTCGTGGTGGACAGCTTCAACCTCCGGCTGCCGAACGTGAGGTGGTTCGTGATGGGAGACGACGACACGGTGTTCTTCCCCCACAACTTGGTCTCGGTGCTGTCGCGTTACGACCATAACCGGATGTACTACATTGGCGGGAACTCGGAGAGCGTCGAGCAGGACGTGATGCACGCGTACGACATGGCGTTCGGCGGCGGCGGGTTCGCCATCAGCTACCCGCTGGCGGCGCGTCTGGCGGAGCTGATGGACGGGTGTTTGGACCGGTACTACAACATGTACGGCTCCGATCAGAGGGTGTGGGCCTGCGTGAGCGAGACGGGTGTGCCTCTCACGAAGCTGGGTGGGTTCCACCAGTTTGACATCAGAGGTGATCCTTATGGTGTTTTAGCGGCTCACCCATTGGCACCACTATTGTCCCTTCACCACATTGACGCCTTGGCACCCATTTTCCCCAACCAGACCCATCTAGACTCGATCAAGTCCCTCGTCCATGCATACCGGGTTGACCCACCTCGGATCCTACAACAAAGTGTCTGCTATGACCGGAGGCGTAAATGGACAGTGTCCATTTCATGGGGCTACACCCTTCAGCTCTACCCCTCAATGGTGTCGGCTCTTGATCTTCGAAGGCCGTTGCAAACGTTCAAGACGTGGCGGAGTTGGGCTGACGGACCCTTCACGTTCAATACCCGACCAGTGAGTTCCAACCCGTGTGAGCGGCCAATCACTTATTTCTTGGAGCATGTTAAGCCGTCCTTGAGTGGGAATACTTTGACTACTTACAAGAGGTTCGGTCATAAAGAGAGGGAATGTAATAGAACAGACTATCATCATGCAATGGCAATGCAGAGGATCGTAGTCCTCTCAAGGAAGATGGACCCTCAGTACTGGACAAAGGAGCTGGCTCCGCGTAGACAGTGCAGCGAGATTAAGAATCTTGCAAGCTTAAGGGGCGGAACGATGATGATTAAAATTAGGAGATGTGGACCCTCGGAATCTATAACAATATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF604

Protein Analysis

508

Amino Acids

58.16

Weight (kDa)

9.5

Isoelectric Point (pI)

53.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Fringe	PF02434	95 - 290	1.9e-16	Fringe-like
DUF604	PF04646	225 - 479	1.6e-105	Protein of unknown function, DUF604

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004645)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G11420
fragaria_vesca	FvH4_7g23010 FvH4_7g23010 FvH4_7g23010 FvH4_7g23010 FvH4_7g23030
malus_domestica	MD01G1138900.v1.1 MD07G1203200.v1.1
prunus_persica	Prupe.2G239400_v2.0.a1
pyrus_communis	pycom07g19010
rosa_chinensis	RchiOBHm_Chr1g0368251 RchiOBHm_Chr1g0368271
rosa_laevigata	RLG00000027225 RLG00000027226
rosa_multiflora	Rmu_co8138488.1_g000001 Rmu_sc0006033.1_g000010 Rmu_sc0006033.1_g000013 Rmu_sc0021728.1_g000001
rosa_roxburghii	Rroxscaffold_4G00288720
rosa_rugosa	Rorug01G0339800
rosa_samantha	Rh1AG347100 Rh1AG347200 Rh1BG310100 Rh1BG310200 Rh1CG325500 Rh1CG325600 Rh1DG341900 Rh1DG342000
rosa_wichuraiana	Rw0G001020 Rw1G030890 Rw1G030900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	267
AccB1I	GGYRCC	2 cut(s)	919, 955
AccB7I	CCANNNNNTGG	2 cut(s)	601, 1089
AccBSI	CCGCTC	2 cut(s)	222, 1234
AccI	GTMKAC	2 cut(s)	267, 1429
AccII	CGCG	8 cut(s)	336, 384, 404, 431, 619, 689, 745, 1426
AccIII	TCCGGA	1 cut(s)	501
AclI	AACGTT	1 cut(s)	1157
AclWI	GGATC	5 cut(s)	512, 881, 1027, 1040, 1376
AcoI	YGGCCR	1 cut(s)	1235
AcuI	CTGAAG	1 cut(s)	1088
AcvI	CACGTG	2 cut(s)	118, 330
AcyI	GRCGYC	2 cut(s)	264, 948
AfaI	GTAC	7 cut(s)	446, 479, 641, 692, 782, 794, 1403
AflII	CTTAAG	1 cut(s)	1462
AflIII	ACRYGT	3 cut(s)	327, 687, 789
AgeI	ACCGGT	1 cut(s)	777
AgsI	TTSAA	4 cut(s)	475, 532, 1162, 1201
AjiI	CACGTC	2 cut(s)	679, 1167
Alw26I	GTCTC	3 cut(s)	564, 610, 824
AlwI	GGATC	5 cut(s)	512, 881, 1027, 1040, 1376
Ama87I	CYCGRG	2 cut(s)	410, 510
Aor13HI	TCCGGA	1 cut(s)	501
AoxI	GGCC	3 cut(s)	816, 1145, 1235
ApeKI	GCWGC	6 cut(s)	22, 49, 108, 315, 541, 1437
ArsI	GACNNNNNNTTYG	2 cut(s)	686, 718
AsiGI	ACCGGT	1 cut(s)	777
AspLEI	GCGC	2 cut(s)	336, 745
AspS9I	GGNCC	9 cut(s)	103, 367, 465, 499, 775, 816, 1187, 1393, 1502
AsuC2I	CCSGG	5 cut(s)	449, 469, 511, 512, 1016
AsuHPI	GGTGA	3 cut(s)	896, 902, 929
AsuII	TTCGAA	1 cut(s)	1141
AvaI	CYCGRG	2 cut(s)	410, 510
AvaII	GGWCC	8 cut(s)	103, 367, 465, 499, 775, 1187, 1393, 1502
BamHI	GGATCC	1 cut(s)	1032
BanI	GGYRCC	2 cut(s)	919, 955
BbrPI	CACGTG	2 cut(s)	118, 330
BbvI	GCAGC	6 cut(s)	34, 61, 95, 327, 528, 1449
BccI	CCATC	7 cut(s)	242, 391, 559, 731, 754, 987, 1384
BceAI	ACGGC	3 cut(s)	811, 1132, 1252
BciVI	GTATCC	1 cut(s)	380
BcnI	CCSGG	5 cut(s)	449, 469, 511, 512, 1016
BcoDI	GTCTC	3 cut(s)	564, 610, 824
BfaI	CTAG	1 cut(s)	983
BfrI	CTTAAG	1 cut(s)	1462
BfuI	GTATCC	1 cut(s)	380
BmcAI	AGTACT	1 cut(s)	1403
Bme1390I	CCNGG	5 cut(s)	449, 469, 511, 512, 1016
Bme18I	GGWCC	8 cut(s)	103, 367, 465, 499, 775, 1187, 1393, 1502
BmeT110I	CYCGRG	2 cut(s)	410, 510
BmgBI	CACGTC	2 cut(s)	679, 1167
BmgT120I	GGNCC	9 cut(s)	103, 367, 465, 499, 775, 816, 1187, 1393, 1502
BmrFI	CCNGG	5 cut(s)	449, 469, 511, 512, 1016
BmsI	GCATC	2 cut(s)	318, 672
Bpu14I	TTCGAA	1 cut(s)	1141
BpuEI	CTTGAG	3 cut(s)	325, 1294, 1366
BpuMI	CCSGG	5 cut(s)	449, 469, 511, 512, 1016
BsaAI	YACGTR	2 cut(s)	118, 330
BsaHI	GRCGYC	2 cut(s)	264, 948
BsaI	GGTCTC	1 cut(s)	610
BsaJI	CCNNGG	6 cut(s)	66, 90, 510, 951, 1028, 1506
BsaWI	WCCGGW	5 cut(s)	369, 501, 633, 777, 1059
Bse118I	RCCGGY	2 cut(s)	39, 777
Bse1I	ACTGG	5 cut(s)	194, 467, 868, 1211, 1409
Bse3DI	GCAATG	3 cut(s)	74, 1359, 1365
BseAI	TCCGGA	1 cut(s)	501
BseDI	CCNNGG	6 cut(s)	66, 90, 510, 951, 1028, 1506
BseGI	GGATG	3 cut(s)	126, 402, 642
BseMI	GCAATG	3 cut(s)	74, 1359, 1365
BseMII	CTCAG	1 cut(s)	1412
BseNI	ACTGG	5 cut(s)	194, 467, 868, 1211, 1409
BseRI	GAGGAG	1 cut(s)	191
BseXI	GCAGC	6 cut(s)	34, 61, 95, 327, 528, 1449
BseYI	CCCAGC	1 cut(s)	853
BsgI	GTGCAG	1 cut(s)	1456
Bsh1236I	CGCG	8 cut(s)	336, 384, 404, 431, 619, 689, 745, 1426
Bsh1285I	CGRYCG	2 cut(s)	208, 340
BshFI	GGCC	3 cut(s)	818, 1147, 1237
BshNI	GGYRCC	2 cut(s)	919, 955
BshTI	ACCGGT	1 cut(s)	777
BsiEI	CGRYCG	2 cut(s)	208, 340
BsiHKCI	CYCGRG	2 cut(s)	410, 510
BsiWI	CGTACG	1 cut(s)	690
BslFI	GGGAC	4 cut(s)	135, 380, 916, 982
BsmAI	GTCTC	3 cut(s)	564, 610, 824
BsmBI	CGTCTC	2 cut(s)	564, 824
BsmFI	GGGAC	4 cut(s)	135, 380, 916, 982
BsnI	GGCC	3 cut(s)	818, 1147, 1237
Bso31I	GGTCTC	1 cut(s)	610
BsoBI	CYCGRG	2 cut(s)	410, 510
Bsp119I	TTCGAA	1 cut(s)	1141
Bsp13I	TCCGGA	1 cut(s)	501
Bsp143I	GATC	9 cut(s)	138, 337, 504, 802, 886, 990, 1032, 1135, 1368
BspANI	GGCC	3 cut(s)	818, 1147, 1237
BspCNI	CTCAG	1 cut(s)	1411
BspEI	TCCGGA	1 cut(s)	501
BspFNI	CGCG	8 cut(s)	336, 384, 404, 431, 619, 689, 745, 1426
BspPI	GGATC	5 cut(s)	512, 881, 1027, 1040, 1376
BspT104I	TTCGAA	1 cut(s)	1141
BspT107I	GGYRCC	2 cut(s)	919, 955
BspTI	CTTAAG	1 cut(s)	1462
BspTNI	GGTCTC	1 cut(s)	610
BsrBI	CCGCTC	2 cut(s)	222, 1234
BsrDI	GCAATG	3 cut(s)	74, 1359, 1365
BsrFI	RCCGGY	2 cut(s)	39, 777
BsrI	ACTGG	5 cut(s)	194, 467, 868, 1211, 1409
BssAI	RCCGGY	2 cut(s)	39, 777
BssECI	CCNNGG	6 cut(s)	66, 90, 510, 951, 1028, 1506
BssMI	GATC	9 cut(s)	138, 337, 504, 802, 886, 990, 1032, 1135, 1368
BssNI	GRCGYC	2 cut(s)	264, 948
BssT1I	CCWWGG	3 cut(s)	66, 90, 951
Bst4CI	ACNGT	3 cut(s)	583, 1078, 1434
BstACI	GRCGYC	2 cut(s)	264, 948
BstAFI	CTTAAG	1 cut(s)	1462
BstBAI	YACGTR	2 cut(s)	118, 330
BstBI	TTCGAA	1 cut(s)	1141
BstC8I	GCNNGC	6 cut(s)	113, 687, 738, 820, 1419, 1459
BstDEI	CTNAG	1 cut(s)	1398
BstF5I	GGATG	3 cut(s)	126, 402, 642
BstFNI	CGCG	8 cut(s)	336, 384, 404, 431, 619, 689, 745, 1426
BstHHI	GCGC	2 cut(s)	336, 745
BstKTI	GATC	9 cut(s)	141, 340, 507, 805, 889, 993, 1035, 1138, 1371
BstMAI	GTCTC	3 cut(s)	564, 610, 824
BstMBI	GATC	9 cut(s)	138, 337, 504, 802, 886, 990, 1032, 1135, 1368
BstMCI	CGRYCG	2 cut(s)	208, 340
BstMWI	GCNNNNNNNGC	7 cut(s)	315, 342, 742, 749, 1264, 1423, 1467
BstNSI	RCATGY	3 cut(s)	115, 793, 1262
BstSCI	CCNGG	5 cut(s)	447, 467, 509, 510, 1014
BstUI	CGCG	8 cut(s)	336, 384, 404, 431, 619, 689, 745, 1426
BstV1I	GCAGC	6 cut(s)	34, 61, 95, 327, 528, 1449
BstX2I	RGATCY	1 cut(s)	1032
BstYI	RGATCY	1 cut(s)	1032
BsuI	GTATCC	1 cut(s)	380
BsuRI	GGCC	3 cut(s)	818, 1147, 1237
BtrI	CACGTC	2 cut(s)	679, 1167
BtsCI	GGATG	3 cut(s)	126, 402, 642
BtsIMutI	CAGTG	4 cut(s)	187, 1083, 1218, 1439
Cac8I	GCNNGC	6 cut(s)	113, 687, 738, 820, 1419, 1459
CfoI	GCGC	2 cut(s)	336, 745
Cfr10I	RCCGGY	2 cut(s)	39, 777
Cfr13I	GGNCC	9 cut(s)	103, 367, 465, 499, 775, 816, 1187, 1393, 1502
Cfr9I	CCCGGG	1 cut(s)	510
CpoI	CGGWCCG	1 cut(s)	499
CseI	GACGC	4 cut(s)	410, 655, 734, 956
Csp6I	GTAC	7 cut(s)	445, 478, 640, 691, 781, 793, 1402
CspAI	ACCGGT	1 cut(s)	777
CspI	CGGWCCG	1 cut(s)	499
CviAII	CATG	8 cut(s)	112, 360, 697, 790, 1007, 1089, 1259, 1349
CviQI	GTAC	7 cut(s)	445, 478, 640, 691, 781, 793, 1402
DdeI	CTNAG	1 cut(s)	1398
DpnI	GATC	9 cut(s)	140, 339, 506, 804, 888, 992, 1034, 1137, 1370
DpnII	GATC	9 cut(s)	138, 337, 504, 802, 886, 990, 1032, 1135, 1368
EaeI	YGGCCR	1 cut(s)	1235
EciI	GGCGGA	5 cut(s)	157, 214, 767, 1186, 1485
Eco130I	CCWWGG	3 cut(s)	66, 90, 951
Eco31I	GGTCTC	1 cut(s)	610
Eco47I	GGWCC	8 cut(s)	103, 367, 465, 499, 775, 1187, 1393, 1502
Eco57I	CTGAAG	1 cut(s)	1088
Eco72I	CACGTG	2 cut(s)	118, 330
Eco88I	CYCGRG	2 cut(s)	410, 510
EcoT14I	CCWWGG	3 cut(s)	66, 90, 951
EcoT22I	ATGCAT	1 cut(s)	1012
ErhI	CCWWGG	3 cut(s)	66, 90, 951
Esp3I	CGTCTC	2 cut(s)	564, 824
FaeI	CATG	8 cut(s)	115, 363, 700, 793, 1010, 1092, 1262, 1352
FalI	AAGNNNNNCTT	2 cut(s)	1256, 1288
FaqI	GGGAC	4 cut(s)	135, 380, 916, 982
FatI	CATG	8 cut(s)	111, 359, 696, 789, 1006, 1088, 1258, 1348
FauI	CCCGC	4 cut(s)	227, 644, 707, 741
FblI	GTMKAC	2 cut(s)	267, 1429
FokI	GGATG	3 cut(s)	113, 409, 649
FspBI	CTAG	1 cut(s)	983
GlaI	GCGC	2 cut(s)	335, 744
GsaI	CCCAGC	1 cut(s)	857
HaeIII	GGCC	3 cut(s)	818, 1147, 1237
HgaI	GACGC	4 cut(s)	410, 655, 734, 956
HhaI	GCGC	2 cut(s)	336, 745
Hin1I	GRCGYC	2 cut(s)	264, 948
Hin1II	CATG	8 cut(s)	115, 363, 700, 793, 1010, 1092, 1262, 1352
Hin6I	GCGC	2 cut(s)	334, 743
HinP1I	GCGC	2 cut(s)	334, 743
HincII	GTYRAC	3 cut(s)	268, 325, 1021
HindII	GTYRAC	3 cut(s)	268, 325, 1021
HindIII	AAGCTT	1 cut(s)	1459
HinfI	GANTC	5 cut(s)	4, 123, 986, 1450, 1511
HphI	GGTGA	3 cut(s)	896, 902, 929
Hpy166II	GTNNAC	6 cut(s)	268, 325, 523, 1021, 1430, 1502
Hpy188I	TCNGA	9 cut(s)	63, 138, 342, 661, 802, 807, 881, 1032, 1510
Hpy188III	TCNNGA	7 cut(s)	304, 502, 562, 847, 983, 1133, 1162
Hpy8I	GTNNAC	6 cut(s)	268, 325, 523, 1021, 1430, 1502
Hpy99I	CGWCG	5 cut(s)	266, 269, 431, 578, 671
HpyAV	CCTTC	5 cut(s)	181, 944, 1112, 1137, 1201
HpyCH4III	ACNGT	3 cut(s)	583, 1078, 1434
HpyCH4V	TGCA	9 cut(s)	111, 115, 685, 1010, 1153, 1352, 1363, 1437, 1457
HpyF10VI	GCNNNNNNNGC	7 cut(s)	315, 342, 742, 749, 1264, 1423, 1467
HpyF3I	CTNAG	1 cut(s)	1398
Hsp92I	GRCGYC	2 cut(s)	264, 948
Hsp92II	CATG	8 cut(s)	115, 363, 700, 793, 1010, 1092, 1262, 1352
HspAI	GCGC	2 cut(s)	334, 743
Kpn2I	TCCGGA	1 cut(s)	501
Kzo9I	GATC	9 cut(s)	138, 337, 504, 802, 886, 990, 1032, 1135, 1368
Lsp1109I	GCAGC	6 cut(s)	34, 61, 95, 327, 528, 1449
LweI	GCATC	2 cut(s)	318, 672
MaeI	CTAG	1 cut(s)	983
MaeIII	GTNAC	1 cut(s)	620
MalI	GATC	9 cut(s)	140, 339, 506, 804, 888, 992, 1034, 1137, 1370
MbiI	CCGCTC	2 cut(s)	222, 1234
MboI	GATC	9 cut(s)	138, 337, 504, 802, 886, 990, 1032, 1135, 1368
MboII	GAAGA	3 cut(s)	580, 1130, 1399
MflI	RGATCY	1 cut(s)	1032
MluCI	AATT	1 cut(s)	1488
MluI	ACGCGT	1 cut(s)	687
MlyI	GAGTC	3 cut(s)	13, 117, 980
MmeI	TCCRAC	3 cut(s)	24, 86, 1245
Mph1103I	ATGCAT	1 cut(s)	1012
MroI	TCCGGA	1 cut(s)	501
MseI	TTAA	6 cut(s)	54, 419, 1263, 1446, 1463, 1485
MslI	CAYNNNNRTG	1 cut(s)	116
MspA1I	CMGCKG	2 cut(s)	108, 736
MspCI	CTTAAG	1 cut(s)	1462
MspR9I	CCNGG	5 cut(s)	449, 469, 511, 512, 1016
MvnI	CGCG	8 cut(s)	336, 384, 404, 431, 619, 689, 745, 1426
MwoI	GCNNNNNNNGC	7 cut(s)	315, 342, 742, 749, 1264, 1423, 1467
NciI	CCSGG	5 cut(s)	449, 469, 511, 512, 1016
NdeII	GATC	9 cut(s)	138, 337, 504, 802, 886, 990, 1032, 1135, 1368
NlaIII	CATG	8 cut(s)	115, 363, 700, 793, 1010, 1092, 1262, 1352
NsiI	ATGCAT	1 cut(s)	1012
NspI	RCATGY	3 cut(s)	115, 793, 1262
NspV	TTCGAA	1 cut(s)	1141
PaeI	GCATGC	1 cut(s)	115
PciI	ACATGT	1 cut(s)	789
PcsI	WCGNNNNNNNCGW	6 cut(s)	270, 318, 408, 513, 675, 1163
PfeI	GAWTC	2 cut(s)	1450, 1511
Pfl23II	CGTACG	1 cut(s)	690
PflFI	GACNNNGTC	1 cut(s)	1078
PflMI	CCANNNNNTGG	2 cut(s)	601, 1089
PinAI	ACCGGT	1 cut(s)	777
Ple19I	CGATCG	1 cut(s)	340
PleI	GAGTC	3 cut(s)	12, 117, 980
PmaCI	CACGTG	2 cut(s)	118, 330
PmlI	CACGTG	2 cut(s)	118, 330
PpsI	GAGTC	3 cut(s)	12, 117, 980
Ppu21I	YACGTR	2 cut(s)	118, 330
PscI	ACATGT	1 cut(s)	789
Psp1406I	AACGTT	1 cut(s)	1157
PspCI	CACGTG	2 cut(s)	118, 330
PspFI	CCCAGC	1 cut(s)	853
PspLI	CGTACG	1 cut(s)	690
PspPI	GGNCC	9 cut(s)	103, 367, 465, 499, 775, 816, 1187, 1393, 1502
PsuI	RGATCY	1 cut(s)	1032
PsyI	GACNNNGTC	1 cut(s)	1078
PvuI	CGATCG	1 cut(s)	340
RsaI	GTAC	7 cut(s)	446, 479, 641, 692, 782, 794, 1403
RsaNI	GTAC	7 cut(s)	445, 478, 640, 691, 781, 793, 1402
RseI	CAYNNNNRTG	1 cut(s)	116
Rsr2I	CGGWCCG	1 cut(s)	499
RsrII	CGGWCCG	1 cut(s)	499
SalI	GTCGAC	1 cut(s)	266
SaqAI	TTAA	6 cut(s)	54, 419, 1263, 1446, 1463, 1485
Sau3AI	GATC	9 cut(s)	138, 337, 504, 802, 886, 990, 1032, 1135, 1368
Sau96I	GGNCC	9 cut(s)	103, 367, 465, 499, 775, 816, 1187, 1393, 1502
ScaI	AGTACT	1 cut(s)	1403
SchI	GAGTC	3 cut(s)	13, 117, 980
ScrFI	CCNGG	5 cut(s)	449, 469, 511, 512, 1016
SfaNI	GCATC	2 cut(s)	318, 672
SfuI	TTCGAA	1 cut(s)	1141
SinI	GGWCC	8 cut(s)	103, 367, 465, 499, 775, 1187, 1393, 1502
SmaI	CCCGGG	1 cut(s)	512
SmiMI	CAYNNNNRTG	1 cut(s)	116
SmlI	CTYRAG	4 cut(s)	304, 1273, 1381, 1462
SmoI	CTYRAG	4 cut(s)	304, 1273, 1381, 1462
SphI	GCATGC	1 cut(s)	115
Sse9I	AATT	1 cut(s)	1488
SspMI	CTAG	1 cut(s)	983
StyD4I	CCNGG	5 cut(s)	447, 467, 509, 510, 1014
StyI	CCWWGG	3 cut(s)	66, 90, 951
TaaI	ACNGT	3 cut(s)	583, 1078, 1434
TaqI	TCGA	7 cut(s)	7, 34, 204, 267, 669, 989, 1141
TaqII	GACCGA	2 cut(s)	222, 1298
TasI	AATT	1 cut(s)	1488
TatI	WGTACW	3 cut(s)	477, 639, 1401
TauI	GCSGC	7 cut(s)	348, 434, 711, 714, 743, 908, 1237
TfiI	GAWTC	2 cut(s)	1450, 1511
Tru1I	TTAA	6 cut(s)	54, 419, 1263, 1446, 1463, 1485
Tru9I	TTAA	6 cut(s)	54, 419, 1263, 1446, 1463, 1485
TscAI	CASTG	4 cut(s)	194, 1083, 1218, 1439
TseI	GCWGC	6 cut(s)	22, 49, 108, 315, 541, 1437
TspDTI	ATGAA	1 cut(s)	1077
TspGWI	ACGGA	2 cut(s)	310, 1200
TspMI	CCCGGG	1 cut(s)	510
TspRI	CASTG	4 cut(s)	194, 1083, 1218, 1439
Tth111I	GACNNNGTC	1 cut(s)	1078
Van91I	CCANNNNNTGG	2 cut(s)	601, 1089
Vha464I	CTTAAG	1 cut(s)	1462
VpaK11BI	GGWCC	8 cut(s)	103, 367, 465, 499, 775, 1187, 1393, 1502
XbaI	TCTAGA	1 cut(s)	982
XceI	RCATGY	3 cut(s)	115, 793, 1262
XcmI	CCANNNNNNNNNTGG	1 cut(s)	97
XmaI	CCCGGG	1 cut(s)	510
XmiI	GTMKAC	2 cut(s)	267, 1429
XspI	CTAG	1 cut(s)	983
ZraI	GACGTC	1 cut(s)	265
ZrmI	AGTACT	1 cut(s)	1403
Zsp2I	ATGCAT	1 cut(s)	1012

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.