Rmu_sc0006033.1_g000010

Protein of unknown function, DUF604

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006033.1
Physical Location & Seq
Reverse (-)
54014 .. 57220
3207 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006033.1_g000010.1.cds

Sequence Viewer

Length: 1983 bp
atgagtccgagccgattggagcagctcaaagcaccgaacttggtgtcattgccggaaaaaaccaaacgtaatttattggttcggtgcatgcgcgtgggcctcattctctctctgatcgcttcaatctcactcgccctcagcttcgccttctctccccaatccaactggttccccatcctggaccgaaaccgagcccgcaccgccgtctccgccgtcttctccaccaccaccgatgacagcgaactacccaccgacatctcccacattctgttcggtctcggcagctccgtcgacaagtggcgtgaccggtgcccctactccgaaacatggtggaactcgaacaccacacgcggttacgtctggctggactcgaagccggagaatgacgtttcagcttatatcccgtaccgggtgtcggagaactggacccagttcaggtacgtgcactcccagtcggaggtccggatggcccggatcgtggtggacagctttaacctccggctgccgaacgtgagatggttcgttatgggagacgatgacacgatcttcttccccgacaacttggtctcggtgctatcacagtacgatcataaccagatgtactacattggcgggaactcggagagcgtcgagcaggacgtgacgcacgcgtacgacatggcgtttggcggcggcgggttcgccatcagctacccgctggcggcgcgtttggcggagctgatggacggctgtttggaccggtacttcaatatgtacggctctgatcagagggtgtgggcttgcatggtcgagatcggtgtgcctctcacgaagctgagtggctccgtcgacaagtggcgtgaccggtgcccctactccgaaacatggtggaactcgaacaccacacgcggttacgtctggctggactcgaagccggagaatgacgtttcagcttatatcccgtaccgggtgtcggagaactggacccagttcaggtacgtgcactcccagtcggaggtccggatggcccggatcgtggtggacagctttaacctccggctgcagaacgtgagatggttcgttatgggagacgacgacacgatcttcttccccgacaacttggtctcggtgctatcacagtacgatcataaccagatgtactacattggcgggaactcggagagcgtcgagcaggacgtgacgcacgcgtacgacatggcgtttggcggcggcgggttcgccatcagctacccgctggcggcgcgtttggcggagctgatggacggctgtttggaccggtacttcaatatgtacggctctgatcagagggtgtgggcttgcatggtcgagatcggtgtgcctctcacgaagctgagtgggttccaccagtttgacatcagaggtgatccgtatggtgttttagcggctcacccattggcaccactgctttcccttcaccacattgacgccttggaacccattttccccgaccagacccatctagactccgtcaagtccctcgtccatgcataccgagttgacccgtcccggatcctacaacagagcttctgctacgaccggaggcgccaatggacagtgtccatttcatggggctacaccattcagctctacccctcaatggtgttggctcttgaacttccgacgccgttgcagacgttcaagacgtggcggagttggactaatggacccttcacgttcaacacccgacccgtgagctccaacccgtgtgagcagccaatgacttatttcttggaggatgttaaggacggaaatagtggggatactctgactacttacaagaggtttgtgagtgataaagggaagaaatgtaaaagagcagactatgcctatgcaatggcaatgcagaggatcgtagtcgtttcaaggaagatggaccctcagtactggacaaaggtaacttcacctctctttagtaatagtactattgctcctattttcaatgaaggttgttcccatgcataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

660

Amino Acids

75.65

Weight (kDa)

5.9

Isoelectric Point (pI)

43.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 563, 1100
AccB1I GGYRCC 4 cut(s) 309, 846, 1417, 1563
AccB7I CCANNNNNTGG 1 cut(s) 1587
AccI GTMKAC 2 cut(s) 291, 828
AccII CGCG 7 cut(s) 93, 351, 650, 706, 888, 1187, 1243
AccIII TCCGGA 2 cut(s) 462, 999
AclWI GGATC 6 cut(s) 482, 1019, 1379, 1525, 1538, 1877
AcyI GRCGYC 3 cut(s) 1446, 1564, 1643
AflIII ACRYGT 2 cut(s) 648, 1185
AgeI ACCGGT 4 cut(s) 306, 738, 843, 1275
AgsI TTSAA 8 cut(s) 123, 748, 1285, 1634, 1660, 1699, 1884, 1960
AjiI CACGTC 3 cut(s) 640, 1177, 1665
AjnI CCWGG 1 cut(s) 177
AloI GAACNNNNNNTCC 2 cut(s) 1446, 1478
Alw21I GWGCWC 3 cut(s) 447, 984, 1718
Alw26I GTCTC 6 cut(s) 211, 281, 525, 571, 1062, 1108
Alw44I GTGCAC 2 cut(s) 443, 980
AlwI GGATC 6 cut(s) 482, 1019, 1379, 1525, 1538, 1877
Aor13HI TCCGGA 2 cut(s) 462, 999
AoxI GGCC 3 cut(s) 97, 468, 1005
ApaLI GTGCAC 2 cut(s) 443, 980
ApeKI GCWGC 5 cut(s) 22, 282, 502, 1039, 1732
ArsI GACNNNNNNTTYG 6 cut(s) 29, 61, 647, 679, 1184, 1216
AsiGI ACCGGT 4 cut(s) 306, 738, 843, 1275
AspLEI GCGC 4 cut(s) 93, 706, 1243, 1566
AsuC2I CCSGG 5 cut(s) 410, 472, 947, 1009, 1528
AsuHPI GGTGA 4 cut(s) 1394, 1400, 1427, 1914
AvaII GGWCC 9 cut(s) 181, 426, 460, 736, 963, 997, 1273, 1685, 1894
BaeGI GKGCMC 4 cut(s) 314, 447, 851, 984
BamHI GGATCC 1 cut(s) 1530
BanI GGYRCC 4 cut(s) 309, 846, 1417, 1563
BanII GRGCYC 2 cut(s) 196, 1718
BbsI GAAGAC 1 cut(s) 208
Bbv12I GWGCWC 3 cut(s) 447, 984, 1718
BbvCI CCTCAGC 1 cut(s) 137
BbvI GCAGC 5 cut(s) 34, 294, 489, 1026, 1744
BceAI ACGGC 7 cut(s) 188, 197, 742, 772, 1279, 1309, 1630
BcgI CGANNNNNNTGC 4 cut(s) 271, 305, 1630, 1664
BciT130I CCWGG 1 cut(s) 179
BciVI GTATCC 1 cut(s) 1774
BclI TGATCA 2 cut(s) 763, 1300
BcnI CCSGG 5 cut(s) 410, 472, 947, 1009, 1528
BcoDI GTCTC 6 cut(s) 211, 281, 525, 571, 1062, 1108
BfaI CTAG 1 cut(s) 1481
BfmI CTRYAG 1 cut(s) 1040
BfoI RGCGCY 1 cut(s) 1567
BfuI GTATCC 1 cut(s) 1774
BmcAI AGTACT 2 cut(s) 1904, 1942
Bme1390I CCNGG 6 cut(s) 179, 410, 472, 947, 1009, 1528
Bme18I GGWCC 9 cut(s) 181, 426, 460, 736, 963, 997, 1273, 1685, 1894
BmgBI CACGTC 3 cut(s) 640, 1177, 1665
BmrFI CCNGG 6 cut(s) 179, 410, 472, 947, 1009, 1528
BmrI ACTGGG 4 cut(s) 424, 445, 961, 982
BmuI ACTGGG 4 cut(s) 424, 445, 961, 982
BpiI GAAGAC 1 cut(s) 208
Bpu10I CCTNAGC 1 cut(s) 137
BpuMI CCSGG 5 cut(s) 410, 472, 947, 1009, 1528
BsaAI YACGTR 2 cut(s) 442, 979
BsaHI GRCGYC 3 cut(s) 1446, 1564, 1643
BsaI GGTCTC 3 cut(s) 281, 571, 1108
BsaJI CCNNGG 1 cut(s) 1449
BsaWI WCCGGW 7 cut(s) 306, 462, 738, 843, 999, 1275, 1557
BsaXI ACNNNNNCTCC 6 cut(s) 431, 461, 968, 998, 1933, 1963
Bse118I RCCGGY 4 cut(s) 306, 738, 843, 1275
Bse1I ACTGG 9 cut(s) 170, 428, 430, 451, 965, 967, 988, 1366, 1910
Bse3DI GCAATG 3 cut(s) 47, 1860, 1866
BseAI TCCGGA 2 cut(s) 462, 999
BseBI CCWGG 1 cut(s) 179
BseDI CCNNGG 1 cut(s) 1449
BseGI GGATG 4 cut(s) 174, 471, 1008, 1762
BseMI GCAATG 3 cut(s) 47, 1860, 1866
BseMII CTCAG 4 cut(s) 151, 806, 1343, 1913
BseNI ACTGG 9 cut(s) 170, 428, 430, 451, 965, 967, 988, 1366, 1910
BseSI GKGCMC 4 cut(s) 314, 447, 851, 984
BseXI GCAGC 5 cut(s) 34, 294, 489, 1026, 1744
Bsh1236I CGCG 7 cut(s) 93, 351, 650, 706, 888, 1187, 1243
Bsh1285I CGRYCG 1 cut(s) 1558
BshFI GGCC 3 cut(s) 99, 470, 1007
BshNI GGYRCC 4 cut(s) 309, 846, 1417, 1563
BshTI ACCGGT 4 cut(s) 306, 738, 843, 1275
BsiEI CGRYCG 1 cut(s) 1558
BsiHKAI GWGCWC 3 cut(s) 447, 984, 1718
BsiWI CGTACG 2 cut(s) 651, 1188
BslFI GGGAC 2 cut(s) 1480, 1510
BsmAI GTCTC 6 cut(s) 211, 281, 525, 571, 1062, 1108
BsmBI CGTCTC 3 cut(s) 211, 525, 1062
BsmFI GGGAC 2 cut(s) 1480, 1510
BsnI GGCC 3 cut(s) 99, 470, 1007
Bso31I GGTCTC 3 cut(s) 281, 571, 1108
Bsp1286I GDGCHC 6 cut(s) 196, 314, 447, 851, 984, 1718
Bsp13I TCCGGA 2 cut(s) 462, 999
BspANI GGCC 3 cut(s) 99, 470, 1007
BspCNI CTCAG 4 cut(s) 150, 807, 1344, 1912
BspEI TCCGGA 2 cut(s) 462, 999
BspFNI CGCG 7 cut(s) 93, 351, 650, 706, 888, 1187, 1243
BspMAI CTGCAG 1 cut(s) 1044
BspPI GGATC 6 cut(s) 482, 1019, 1379, 1525, 1538, 1877
BspT107I GGYRCC 4 cut(s) 309, 846, 1417, 1563
BspTNI GGTCTC 3 cut(s) 281, 571, 1108
BsrDI GCAATG 3 cut(s) 47, 1860, 1866
BsrFI RCCGGY 4 cut(s) 306, 738, 843, 1275
BsrI ACTGG 9 cut(s) 170, 428, 430, 451, 965, 967, 988, 1366, 1910
BssAI RCCGGY 4 cut(s) 306, 738, 843, 1275
BssECI CCNNGG 1 cut(s) 1449
BssNI GRCGYC 3 cut(s) 1446, 1564, 1643
BssT1I CCWWGG 1 cut(s) 1449
Bst2UI CCWGG 1 cut(s) 179
Bst4CI ACNGT 3 cut(s) 582, 1119, 1576
BstACI GRCGYC 3 cut(s) 1446, 1564, 1643
BstAPI GCANNNNNTGC 1 cut(s) 1844
BstBAI YACGTR 2 cut(s) 442, 979
BstC8I GCNNGC 8 cut(s) 89, 196, 648, 699, 781, 1185, 1236, 1318
BstDEI CTNAG 4 cut(s) 137, 815, 1352, 1899
BstF5I GGATG 4 cut(s) 174, 471, 1008, 1762
BstFNI CGCG 7 cut(s) 93, 351, 650, 706, 888, 1187, 1243
BstH2I RGCGCY 1 cut(s) 1567
BstHHI GCGC 4 cut(s) 93, 706, 1243, 1566
BstMAI GTCTC 6 cut(s) 211, 281, 525, 571, 1062, 1108
BstMCI CGRYCG 1 cut(s) 1558
BstMWI GCNNNNNNNGC 7 cut(s) 200, 209, 703, 710, 1240, 1247, 1844
BstNI CCWGG 1 cut(s) 179
BstNSI RCATGY 1 cut(s) 91
BstSCI CCNGG 6 cut(s) 177, 408, 470, 945, 1007, 1526
BstSFI CTRYAG 1 cut(s) 1040
BstSLI GKGCMC 4 cut(s) 314, 447, 851, 984
BstUI CGCG 7 cut(s) 93, 351, 650, 706, 888, 1187, 1243
BstV1I GCAGC 5 cut(s) 34, 294, 489, 1026, 1744
BstV2I GAAGAC 1 cut(s) 208
BstX2I RGATCY 1 cut(s) 1530
BstYI RGATCY 1 cut(s) 1530
BsuI GTATCC 1 cut(s) 1774
BsuRI GGCC 3 cut(s) 99, 470, 1007
BtrI CACGTC 3 cut(s) 640, 1177, 1665
BtsCI GGATG 4 cut(s) 174, 471, 1008, 1762
BtsI GCAGTG 1 cut(s) 1421
BtsIMutI CAGTG 2 cut(s) 1421, 1581
Cac8I GCNNGC 8 cut(s) 89, 196, 648, 699, 781, 1185, 1236, 1318
CfoI GCGC 4 cut(s) 93, 706, 1243, 1566
Cfr10I RCCGGY 4 cut(s) 306, 738, 843, 1275
CseI GACGC 6 cut(s) 616, 652, 1153, 1189, 1454, 1651
CspAI ACCGGT 4 cut(s) 306, 738, 843, 1275
DdeI CTNAG 4 cut(s) 137, 815, 1352, 1899
DinI GGCGCC 1 cut(s) 1565
DrdI GACNNNNNNGTC 2 cut(s) 563, 1100
DseDI GACNNNNNNGTC 2 cut(s) 563, 1100
EciI GGCGGA 4 cut(s) 199, 728, 1265, 1684
Ecl136II GAGCTC 1 cut(s) 1716
Eco130I CCWWGG 1 cut(s) 1449
Eco24I GRGCYC 2 cut(s) 196, 1718
Eco31I GGTCTC 3 cut(s) 281, 571, 1108
Eco47I GGWCC 9 cut(s) 181, 426, 460, 736, 963, 997, 1273, 1685, 1894
Eco53kI GAGCTC 1 cut(s) 1716
EcoICRI GAGCTC 1 cut(s) 1716
EcoRII CCWGG 1 cut(s) 177
EcoT14I CCWWGG 1 cut(s) 1449
EcoT22I ATGCAT 2 cut(s) 1510, 1981
EcoT38I GRGCYC 2 cut(s) 196, 1718
EgeI GGCGCC 1 cut(s) 1565
EheI GGCGCC 1 cut(s) 1565
ErhI CCWWGG 1 cut(s) 1449
Esp3I CGTCTC 3 cut(s) 211, 525, 1062
FaqI GGGAC 2 cut(s) 1480, 1510
FauI CCCGC 7 cut(s) 203, 605, 668, 702, 1142, 1205, 1239
FbaI TGATCA 2 cut(s) 763, 1300
FblI GTMKAC 2 cut(s) 291, 828
FokI GGATG 4 cut(s) 161, 478, 1015, 1769
FriOI GRGCYC 2 cut(s) 196, 1718
FspBI CTAG 1 cut(s) 1481
GlaI GCGC 4 cut(s) 92, 705, 1242, 1565
HaeII RGCGCY 1 cut(s) 1567
HaeIII GGCC 3 cut(s) 99, 470, 1007
HgaI GACGC 6 cut(s) 616, 652, 1153, 1189, 1454, 1651
HhaI GCGC 4 cut(s) 93, 706, 1243, 1566
Hin1I GRCGYC 3 cut(s) 1446, 1564, 1643
Hin6I GCGC 4 cut(s) 91, 704, 1241, 1564
HinP1I GCGC 4 cut(s) 91, 704, 1241, 1564
HincII GTYRAC 3 cut(s) 292, 829, 1519
HindII GTYRAC 3 cut(s) 292, 829, 1519
HinfI GANTC 4 cut(s) 4, 368, 905, 1484
HphI GGTGA 4 cut(s) 1394, 1400, 1427, 1914
Hpy166II GTNNAC 7 cut(s) 292, 445, 484, 829, 982, 1021, 1519
Hpy188III TCNNGA 9 cut(s) 463, 790, 808, 1000, 1327, 1345, 1481, 1631, 1660
Hpy8I GTNNAC 7 cut(s) 292, 445, 484, 829, 982, 1021, 1519
Hpy99I CGWCG 6 cut(s) 293, 632, 830, 1076, 1169, 1645
HpyAV CCTTC 4 cut(s) 157, 1442, 1699, 1958
HpyCH4III ACNGT 3 cut(s) 582, 1119, 1576
HpyF10VI GCNNNNNNNGC 7 cut(s) 200, 209, 703, 710, 1240, 1247, 1844
HpyF3I CTNAG 4 cut(s) 137, 815, 1352, 1899
Hsp92I GRCGYC 3 cut(s) 1446, 1564, 1643
HspAI GCGC 4 cut(s) 91, 704, 1241, 1564
KasI GGCGCC 1 cut(s) 1563
Kpn2I TCCGGA 2 cut(s) 462, 999
Ksp22I TGATCA 2 cut(s) 763, 1300
LmnI GCTCC 7 cut(s) 19, 290, 715, 827, 1252, 1721, 1954
Lsp1109I GCAGC 5 cut(s) 34, 294, 489, 1026, 1744
MaeI CTAG 1 cut(s) 1481
MaeIII GTNAC 7 cut(s) 302, 353, 640, 839, 890, 1177, 1915
MboII GAAGA 7 cut(s) 208, 538, 541, 1075, 1078, 1834, 1900
MflI RGATCY 1 cut(s) 1530
MhlI GDGCHC 6 cut(s) 196, 314, 447, 851, 984, 1718
MluCI AATT 1 cut(s) 70
MluI ACGCGT 2 cut(s) 648, 1185
Mly113I GGCGCC 1 cut(s) 1564
MlyI GAGTC 4 cut(s) 13, 362, 899, 1478
MmeI TCCRAC 8 cut(s) 186, 396, 435, 933, 972, 1655, 1664, 1743
Mph1103I ATGCAT 2 cut(s) 1510, 1981
MroI TCCGGA 2 cut(s) 462, 999
MseI TTAA 3 cut(s) 492, 1029, 1761
MslI CAYNNNNRTG 1 cut(s) 92
MspA1I CMGCKG 2 cut(s) 697, 1234
MspR9I CCNGG 6 cut(s) 179, 410, 472, 947, 1009, 1528
MvaI CCWGG 1 cut(s) 179
MvnI CGCG 7 cut(s) 93, 351, 650, 706, 888, 1187, 1243
MwoI GCNNNNNNNGC 7 cut(s) 200, 209, 703, 710, 1240, 1247, 1844
NarI GGCGCC 1 cut(s) 1564
NciI CCSGG 5 cut(s) 410, 472, 947, 1009, 1528
NmeAIII GCCGAG 1 cut(s) 258
NmuCI GTSAC 4 cut(s) 302, 640, 839, 1177
NsiI ATGCAT 2 cut(s) 1510, 1981
NspI RCATGY 1 cut(s) 91
PaeI GCATGC 1 cut(s) 91
PcsI WCGNNNNNNNCGW 4 cut(s) 285, 636, 1173, 1661
Pfl23II CGTACG 2 cut(s) 651, 1188
PflFI GACNNNGTC 2 cut(s) 1487, 1576
PflMI CCANNNNNTGG 1 cut(s) 1587
PfoI TCCNGGA 2 cut(s) 177, 1526
PinAI ACCGGT 4 cut(s) 306, 738, 843, 1275
PleI GAGTC 4 cut(s) 12, 362, 899, 1478
PluTI GGCGCC 1 cut(s) 1567
PpsI GAGTC 4 cut(s) 12, 362, 899, 1478
Ppu21I YACGTR 2 cut(s) 442, 979
Psp124BI GAGCTC 1 cut(s) 1718
Psp6I CCWGG 1 cut(s) 177
PspGI CCWGG 1 cut(s) 177
PspLI CGTACG 2 cut(s) 651, 1188
PstI CTGCAG 1 cut(s) 1044
PsuI RGATCY 1 cut(s) 1530
PsyI GACNNNGTC 2 cut(s) 1487, 1576
RseI CAYNNNNRTG 1 cut(s) 92
SacI GAGCTC 1 cut(s) 1718
SalI GTCGAC 2 cut(s) 290, 827
SaqAI TTAA 3 cut(s) 492, 1029, 1761
ScaI AGTACT 2 cut(s) 1904, 1942
SchI GAGTC 4 cut(s) 13, 362, 899, 1478
ScrFI CCNGG 6 cut(s) 179, 410, 472, 947, 1009, 1528
SduI GDGCHC 6 cut(s) 196, 314, 447, 851, 984, 1718
SfcI CTRYAG 1 cut(s) 1040
SfoI GGCGCC 1 cut(s) 1565
SinI GGWCC 9 cut(s) 181, 426, 460, 736, 963, 997, 1273, 1685, 1894
SmiMI CAYNNNNRTG 1 cut(s) 92
SphI GCATGC 1 cut(s) 91
Sse9I AATT 1 cut(s) 70
SspDI GGCGCC 1 cut(s) 1563
SspMI CTAG 1 cut(s) 1481
SstI GAGCTC 1 cut(s) 1718
StyD4I CCNGG 6 cut(s) 177, 408, 470, 945, 1007, 1526
StyI CCWWGG 1 cut(s) 1449
TaaI ACNGT 3 cut(s) 582, 1119, 1576
TaqII GACCGA 2 cut(s) 198, 263
TasI AATT 1 cut(s) 70
TatI WGTACW 4 cut(s) 600, 1137, 1902, 1940
TauI GCSGC 7 cut(s) 672, 675, 704, 1209, 1212, 1241, 1406
Tru1I TTAA 3 cut(s) 492, 1029, 1761
Tru9I TTAA 3 cut(s) 492, 1029, 1761
TscAI CASTG 2 cut(s) 1428, 1581
TseFI GTSAC 4 cut(s) 302, 640, 839, 1177
TseI GCWGC 5 cut(s) 22, 282, 502, 1039, 1732
Tsp45I GTSAC 4 cut(s) 302, 640, 839, 1177
TspDTI ATGAA 2 cut(s) 1575, 1977
TspGWI ACGGA 5 cut(s) 277, 814, 1377, 1477, 1782
TspRI CASTG 2 cut(s) 1428, 1581
Tth111I GACNNNGTC 2 cut(s) 1487, 1576
Van91I CCANNNNNTGG 1 cut(s) 1587
VneI GTGCAC 2 cut(s) 443, 980
VpaK11BI GGWCC 9 cut(s) 181, 426, 460, 736, 963, 997, 1273, 1685, 1894
XbaI TCTAGA 1 cut(s) 1480
XceI RCATGY 1 cut(s) 91
XmiI GTMKAC 2 cut(s) 291, 828
XspI CTAG 1 cut(s) 1481
ZrmI AGTACT 2 cut(s) 1904, 1942
Zsp2I ATGCAT 2 cut(s) 1510, 1981
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.