Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0007126

Physical Location & Seq

Genomic Coordinates Reverse (-)

26761511 .. 26766719

Gene Structure 5209 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000028706

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2505 bp

ATGGGCTGCACGGCGTCCAAATTGGACAACGAGGACACCGTGCGGCGGTGCAAGGACCGACGCCGTTTAATGAAAGACGCCGTCTTCGCCCGCCACCACCTCGCCGCCGCCCACGCCGACTACTGCCGCTCCCTCCGCCTCACCGGCACCGCCCTCGTCTCCTTCGCCAACTTCGAACCCCTCTCCATCTCCGACCAAACCCCCGCCGTCTTCCTCCACTCTACCACTACCACTTCCAACCCCTCTCCTCCTCCTCCTCCGTCCAATCCCCTCCATCAACGTGTTCCGCCCTCCCCAGCTCCCTCCTCCCTCCACCCCCCGCCGCCGCCTCCGCCGCTCTCCCCCACCATCGCCAGCTCCAAGCTCCCCCACATCCTCTCCGACTCCTCCCTCTCCTCCTCCCGCCGCCACCGCCGCCGGAGACAGCCGCCGCCGGGGCCGAAGCTCCCGCACATACTCTCCGACACCAGCCCCTCCTCCACTCCCCGGAGCCAGAACTCGAACTTCGCCGGCGGCGGGTTTCCGACGGCCTTTCAGGCGAACTCGACGTACTCCAGCACGCCGTCGCAGGCCTCCTCCGTGTGGAATTGGGAGAATTTCTACCCTCCGTCGCCGCCAGGCTCCGATTTTTTCAACCAGAGAGAGCAGGAGTCCAAACAATCGCACCACCTCGACGATTCCGACGACGACAACACCGAGCCGGAAACCGAAACCGAGGAGGCATCGGAGTACAATTACTTCCACAACATGCCCAAATCCCAACCCACCGCCCGCCAAAACCACTCGTATTCTCAATCGGAGAAGTACGCCCAGTCCGAAACGGAGAGATCAGAGTACGATTTCTTCGTCCCCAACCGTAACCCTAAAGCTCCGGCCAAGACTCAGTCGGAGAAGTACGCTCAGTCGGAGAGAGAGGAGGTCCACTGCAGCGAGTGGGGCGATCACGATCGCTACAGCACCACGAGCTCGTCTGAAAACGAAGACGACGACAGGGATTCGAGATCCGAGATGGGGACCCGGTCCAATTTCGACCCGTCGGTTCGGGCCGAGTCGGTTGCGGGGTCGGTGCCGCCGGCCCAGACGATGCCGAAGTACGCGCCGAGCATGAGGTCGGAGGGGTCGGAAGGGAGTACTTACCGGAGCAGTGAAATCTCGAACATGAAAATGGTGGTGAGGCATAAAGACTTGAAGGAGATTGTGCAGGCGATCAAGGAGAATTTCGATAAGGCCGCGGCGGCCGGAGACCAGGTTTCCGAGATGCTCGAGTCCAACCGGGCCCAGCTTGATCGGAGCTTCAAGCAGCTCAAGAAGAAAGTGTATCACTCAAGTAGTGTGCTTAGCACATTGAGCTCGACTTGGTCGTCGAAGCCGCCGCTAGCGGTGAAGTACCAGCTGGACGCGGAAGTGCTCAATGCACAGGGCGGTCCGAAGAGTCTATGTTCCACCTTCGAGCGGCTTTTGGCTTGGGAGAAGAAGCTCTATCAGGAAGTCAAGGCTAGAGAAAGTGTCAAGATTGAACATGAGAAGAAGTTATCTTCACTACAAAATCAGGAGTACAAGGGAGAGGACGAAATCAAGCTAGACAAGACCAAGGCTTCAATAAAAAGGCTGCAATCACTAATTATTGTCACATCTCAGGCCGTCTCAACCACCTCAACTGCCATCATTGATCTTAGAGACTCTGATCTGGTTCCTCAGCTTGTTGAGCTGTGCCATGGGTTTATGTACATGTGGAGATCAATGCACCAGTACCATGAAGTCCAGAACAACATTGTACAGCAAGTTAGGGGACTTGTGAACCGGTCATCCAAGGGTGACGCAACCTCCGAACTGCACCGCCAGGCAACTCGTGACTTGGAATCAGCTGTTTCTGCCTGGCACTCCAGCTTTTGCCGCTTAATAAAGTTCAAGCGGGACTTTATCCAGTCTGTTCATGGTTGGTTCAAGCTCAGCCTTCTTCCTGTTAACAATGACACCTTCACCAGCAACAATGAGCGTTCTGATGTATATCTCTTCTGTGACGAGTGGAAGCATGCACTTGACCGTGTCCCTGACACAGTGGCTTCAGAGGCTATCAAGAGCTTCATCAATGTTGTCCACGTAATCTCCATAAAACAAAGTGAAGAGCTGAAGATCAAAAAAAGAACTGAAGTTGCATCCAAGGAGCTTGAAAGGAAGGCTTCTTCTGTCCGGAACATTGAAAAGAAGTTCTATAATTCCTATTCCATGGTTGGTATTGGACTTCCCGATTCAGGGCCTGATAACGGGCAAGGTTTGGATGCTCGCGACCCGCTTGCTGAAAAGAAATCTGAACTTGCAACCTCCCAGAGGCGGGTTGAAGAAGAAATGAGTAGACATTCAAAGGCAGTGGAGGTGACTAGAGCAATGACTCTAAACAACCTTCAAACAGGGTTGCCAGGGGTTTTTCAAGCACTGACCAGTTTTTCGGGGTTATTTACAGAGGCACTCGATTCAGTTTGTACTCGTTCCTACTCCATCAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006810 GO:0006811 GO:0006820 GO:0008150 GO:0009987 GO:0010035 GO:0010167 GO:0015698 GO:0015706 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0070887 GO:0071229 GO:0071241 GO:0071249 GO:0071705 GO:1901698 GO:1901699 GO:1901700 GO:1901701 GO:1902170

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF630 DUF632

Protein Analysis

835

Amino Acids

93.6

Weight (kDa)

7.39

Isoelectric Point (pI)

67.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF630	PF04783	1 - 57	9e-24	Protein of unknown function (DUF630)
DUF632	PF04782	396 - 700	2.2e-105	Protein of unknown function (DUF632)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007126)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02110 AT3G60320
fragaria_vesca	FvH4_7g10170
malus_domestica	MD02G1212400.v1.1 MD07G1108500.v1.1 MD07G1108600.v1.1
prunus_persica	Prupe.2G131300_v2.0.a1 Prupe.2G131300_v2.0.a1 Prupe.2G131300_v2.0.a1 Prupe.2G131300_v2.0.a1 Prupe.2G131300_v2.0.a1
pyrus_communis	pycom02g17630 pycom07g09310
rosa_chinensis	RchiOBHm_Chr1g0347891
rosa_laevigata	RLG00000028706
rosa_multiflora	Rmu_co8367439.1_g000001 Rmu_ssc0000342.1_g000007
rosa_roxburghii	Rroxscaffold_4G00307400
rosa_rugosa	Rorug01G0190300 Rorug01G0190400
rosa_samantha	Rh1AG208500 Rh1BG173100 Rh1CG192800 Rh1DG203000
rosa_wichuraiana	Rw1G017330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1360
AccB1I	GGYRCC	2 cut(s)	146, 1066
AccBSI	CCGCTC	3 cut(s)	129, 337, 1453
AccI	GTMKAC	1 cut(s)	2353
AccII	CGCG	4 cut(s)	1097, 1232, 1400, 2286
AccIII	TCCGGA	1 cut(s)	2190
AclWI	GGATC	1 cut(s)	996
AcoI	YGGCCR	2 cut(s)	873, 1236
AcsI	RAATTY	2 cut(s)	595, 1216
AcuI	CTGAAG	3 cut(s)	2049, 2150, 2169
AcyI	GRCGYC	3 cut(s)	14, 61, 78
AflIII	ACRYGT	2 cut(s)	280, 1728
AgeI	ACCGGT	1 cut(s)	1800
AjnI	CCWGG	5 cut(s)	616, 1245, 1839, 1874, 2416
AloI	GAACNNNNNNTCC	2 cut(s)	1790, 1822
Alw21I	GWGCWC	3 cut(s)	968, 1352, 1410
Alw26I	GTCTC	5 cut(s)	163, 415, 1236, 1648, 1671
AlwI	GGATC	1 cut(s)	996
AlwNI	CAGNNNCTG	1 cut(s)	2258
Ama87I	CYCGRG	1 cut(s)	1262
Aor13HI	TCCGGA	1 cut(s)	2190
ApaI	GGGCCC	1 cut(s)	1279
ApeKI	GCWGC	4 cut(s)	6, 927, 1300, 1609
ApoI	RAATTY	2 cut(s)	595, 1216
ArsI	GACNNNNNNTTYG	4 cut(s)	68, 100, 2428, 2460
AsiGI	ACCGGT	1 cut(s)	1800
AspLEI	GCGC	1 cut(s)	1099
AsuC2I	CCSGG	4 cut(s)	435, 487, 1018, 1274
AsuHPI	GGTGA	6 cut(s)	133, 1183, 1393, 1826, 1972, 2386
AsuII	TTCGAA	1 cut(s)	174
AsuNHI	GCTAGC	1 cut(s)	1375
AvaI	CYCGRG	1 cut(s)	1262
AvaII	GGWCC	5 cut(s)	55, 919, 1014, 1020, 1424
BaeGI	GKGCMC	1 cut(s)	1279
BanI	GGYRCC	2 cut(s)	146, 1066
BanII	GRGCYC	3 cut(s)	968, 1279, 1352
BarI	GAAGNNNNNNTAC	4 cut(s)	722, 754, 827, 859
BauI	CACGAG	2 cut(s)	961, 1848
BbsI	GAAGAC	3 cut(s)	76, 202, 987
Bbv12I	GWGCWC	3 cut(s)	968, 1352, 1410
BbvCI	CCTCAGC	1 cut(s)	1695
BbvI	GCAGC	3 cut(s)	939, 1312, 1596
BccI	CCATC	6 cut(s)	194, 282, 356, 1003, 1670, 2504
BceAI	ACGGC	7 cut(s)	27, 48, 65, 191, 543, 547, 1625
BcgI	CGANNNNNNTGC	6 cut(s)	136, 170, 1037, 1071, 2276, 2310
BciT130I	CCWGG	5 cut(s)	618, 1247, 1841, 1876, 2418
BcnI	CCSGG	4 cut(s)	435, 487, 1018, 1274
BcoDI	GTCTC	5 cut(s)	163, 415, 1236, 1648, 1671
BfaI	CTAG	4 cut(s)	1376, 1497, 1580, 2379
BfmI	CTRYAG	2 cut(s)	925, 952
BglI	GCCNNNNNGGC	4 cut(s)	144, 436, 536, 1235
BlpI	GCTNAGC	2 cut(s)	1337, 1949
BmcAI	AGTACT	1 cut(s)	1132
Bme1390I	CCNGG	9 cut(s)	435, 487, 618, 1018, 1247, 1274, 1841, 1876, 2418
Bme18I	GGWCC	5 cut(s)	55, 919, 1014, 1020, 1424
BmeT110I	CYCGRG	1 cut(s)	1262
BmiI	GGNNCC	9 cut(s)	148, 438, 491, 622, 1015, 1016, 1068, 1277, 1692
BmrFI	CCNGG	9 cut(s)	435, 487, 618, 1018, 1247, 1274, 1841, 1876, 2418
BmrI	ACTGGG	1 cut(s)	805
BmsI	GCATC	5 cut(s)	731, 1074, 1248, 2165, 2269
BmtI	GCTAGC	1 cut(s)	1379
BmuI	ACTGGG	1 cut(s)	805
BpiI	GAAGAC	3 cut(s)	76, 202, 987
BpmI	CTGGAG	2 cut(s)	538, 1867
Bpu10I	CCTNAGC	1 cut(s)	1695
Bpu1102I	GCTNAGC	2 cut(s)	1337, 1949
Bpu14I	TTCGAA	1 cut(s)	174
BpuEI	CTTGAG	2 cut(s)	1289, 1309
BpuMI	CCSGG	4 cut(s)	435, 487, 1018, 1274
BsaAI	YACGTR	1 cut(s)	2101
BsaBI	GATNNNNATC	2 cut(s)	945, 2007
BsaHI	GRCGYC	3 cut(s)	14, 61, 78
BsaI	GGTCTC	1 cut(s)	1236
BsaWI	WCCGGW	3 cut(s)	1137, 1800, 2190
Bse118I	RCCGGY	4 cut(s)	143, 509, 1072, 1800
Bse1I	ACTGG	4 cut(s)	811, 1747, 1924, 2439
Bse3DI	GCAATG	1 cut(s)	2391
Bse8I	GATNNNNATC	2 cut(s)	945, 2007
BseAI	TCCGGA	1 cut(s)	2190
BseBI	CCWGG	5 cut(s)	618, 1247, 1841, 1876, 2418
BseGI	GGATG	4 cut(s)	372, 1805, 2156, 2284
BseJI	GATNNNNATC	2 cut(s)	945, 2007
BseMI	GCAATG	1 cut(s)	2391
BseMII	CTCAG	5 cut(s)	896, 914, 1649, 1709, 1963
BseNI	ACTGG	4 cut(s)	811, 1747, 1924, 2439
BseSI	GKGCMC	1 cut(s)	1279
BseX3I	CGGCCG	1 cut(s)	1236
BseXI	GCAGC	3 cut(s)	939, 1312, 1596
BseYI	CCCAGC	2 cut(s)	295, 1278
BsgI	GTGCAG	2 cut(s)	1220, 1817
Bsh1236I	CGCG	4 cut(s)	1097, 1232, 1400, 2286
Bsh1285I	CGRYCG	2 cut(s)	949, 1239
BshNI	GGYRCC	2 cut(s)	146, 1066
BshTI	ACCGGT	1 cut(s)	1800
BsiEI	CGRYCG	2 cut(s)	949, 1239
BsiHKAI	GWGCWC	3 cut(s)	968, 1352, 1410
BsiHKCI	CYCGRG	1 cut(s)	1262
BslFI	GGGAC	5 cut(s)	833, 1027, 1803, 1928, 2033
BsmAI	GTCTC	5 cut(s)	163, 415, 1236, 1648, 1671
BsmBI	CGTCTC	2 cut(s)	163, 1648
BsmFI	GGGAC	5 cut(s)	833, 1027, 1803, 1928, 2033
Bso31I	GGTCTC	1 cut(s)	1236
BsoBI	CYCGRG	1 cut(s)	1262
Bsp119I	TTCGAA	1 cut(s)	174
Bsp120I	GGGCCC	1 cut(s)	1275
Bsp1286I	GDGCHC	4 cut(s)	968, 1279, 1352, 1410
Bsp13I	TCCGGA	1 cut(s)	2190
Bsp1407I	TGTACA	2 cut(s)	1725, 1774
Bsp1720I	GCTNAGC	2 cut(s)	1337, 1949
Bsp19I	CCATGG	2 cut(s)	1714, 2226
Bsp68I	TCGCGA	1 cut(s)	2286
BspCNI	CTCAG	5 cut(s)	895, 913, 1648, 1708, 1962
BspEI	TCCGGA	1 cut(s)	2190
BspFNI	CGCG	4 cut(s)	1097, 1232, 1400, 2286
BspLI	GGNNCC	9 cut(s)	148, 438, 491, 622, 1015, 1016, 1068, 1277, 1692
BspMAI	CTGCAG	1 cut(s)	929
BspOI	GCTAGC	1 cut(s)	1379
BspPI	GGATC	1 cut(s)	996
BspQI	GCTCTTC	1 cut(s)	2118
BspT104I	TTCGAA	1 cut(s)	174
BspT107I	GGYRCC	2 cut(s)	146, 1066
BspTNI	GGTCTC	1 cut(s)	1236
BsrBI	CCGCTC	3 cut(s)	129, 337, 1453
BsrDI	GCAATG	1 cut(s)	2391
BsrFI	RCCGGY	4 cut(s)	143, 509, 1072, 1800
BsrGI	TGTACA	2 cut(s)	1725, 1774
BsrI	ACTGG	4 cut(s)	811, 1747, 1924, 2439
BssAI	RCCGGY	4 cut(s)	143, 509, 1072, 1800
BssNI	GRCGYC	3 cut(s)	14, 61, 78
BssSI	CACGAG	2 cut(s)	961, 1848
BssT1I	CCWWGG	5 cut(s)	1590, 1714, 1809, 2160, 2226
Bst2BI	CACGAG	2 cut(s)	961, 1848
Bst2UI	CCWGG	5 cut(s)	618, 1247, 1841, 1876, 2418
Bst4CI	ACNGT	4 cut(s)	40, 857, 2045, 2059
Bst6I	CTCTTC	3 cut(s)	1424, 2018, 2118
BstACI	GRCGYC	3 cut(s)	14, 61, 78
BstAUI	TGTACA	2 cut(s)	1725, 1774
BstBAI	YACGTR	1 cut(s)	2101
BstBI	TTCGAA	1 cut(s)	174
BstDEI	CTNAG	7 cut(s)	882, 900, 1337, 1635, 1673, 1695, 1949
BstDSI	CCRYGG	3 cut(s)	1230, 1714, 2226
BstENI	CCTNNNNNAGG	1 cut(s)	2326
BstF5I	GGATG	4 cut(s)	372, 1805, 2156, 2284
BstFNI	CGCG	4 cut(s)	1097, 1232, 1400, 2286
BstHHI	GCGC	1 cut(s)	1099
BstMAI	GTCTC	5 cut(s)	163, 415, 1236, 1648, 1671
BstMCI	CGRYCG	2 cut(s)	949, 1239
BstNI	CCWGG	5 cut(s)	618, 1247, 1841, 1876, 2418
BstNSI	RCATGY	3 cut(s)	751, 1732, 2036
BstSCI	CCNGG	9 cut(s)	433, 485, 616, 1016, 1245, 1272, 1839, 1874, 2416
BstSFI	CTRYAG	2 cut(s)	925, 952
BstSLI	GKGCMC	1 cut(s)	1279
BstUI	CGCG	4 cut(s)	1097, 1232, 1400, 2286
BstV1I	GCAGC	3 cut(s)	939, 1312, 1596
BstV2I	GAAGAC	3 cut(s)	76, 202, 987
BstX2I	RGATCY	1 cut(s)	1001
BstYI	RGATCY	1 cut(s)	1001
BstZI	CGGCCG	1 cut(s)	1236
BtgI	CCRYGG	3 cut(s)	1230, 1714, 2226
BtgZI	GCGATG	1 cut(s)	334
BtsCI	GGATG	4 cut(s)	372, 1805, 2156, 2284
BtsI	GCAGTG	3 cut(s)	922, 1150, 2373
BtsIMutI	CAGTG	5 cut(s)	922, 1150, 2064, 2373, 2432
BtuMI	TCGCGA	1 cut(s)	2286
CaiI	CAGNNNCTG	1 cut(s)	2258
CfoI	GCGC	1 cut(s)	1099
Cfr10I	RCCGGY	4 cut(s)	143, 509, 1072, 1800
Cfr42I	CCGCGG	1 cut(s)	1233
CpoI	CGGWCCG	1 cut(s)	1424
CseI	GACGC	5 cut(s)	3, 69, 86, 1406, 1826
CsiI	ACCWGGT	1 cut(s)	1245
CspAI	ACCGGT	1 cut(s)	1800
CspCI	CAANNNNNGTGG	2 cut(s)	2349, 2384
CspI	CGGWCCG	1 cut(s)	1424
DdeI	CTNAG	7 cut(s)	882, 900, 1337, 1635, 1673, 1695, 1949
DrdI	GACNNNNNNGTC	1 cut(s)	1360
DseDI	GACNNNNNNGTC	1 cut(s)	1360
EaeI	YGGCCR	2 cut(s)	873, 1236
EagI	CGGCCG	1 cut(s)	1236
Eam1104I	CTCTTC	3 cut(s)	1424, 2018, 2118
EarI	CTCTTC	3 cut(s)	1424, 2018, 2118
EciI	GGCGGA	3 cut(s)	125, 276, 321
Ecl136II	GAGCTC	2 cut(s)	966, 1350
EclXI	CGGCCG	1 cut(s)	1236
Eco130I	CCWWGG	5 cut(s)	1590, 1714, 1809, 2160, 2226
Eco147I	AGGCCT	1 cut(s)	572
Eco24I	GRGCYC	3 cut(s)	968, 1279, 1352
Eco31I	GGTCTC	1 cut(s)	1236
Eco47I	GGWCC	5 cut(s)	55, 919, 1014, 1020, 1424
Eco52I	CGGCCG	1 cut(s)	1236
Eco53kI	GAGCTC	2 cut(s)	966, 1350
Eco57I	CTGAAG	3 cut(s)	2049, 2150, 2169
Eco88I	CYCGRG	1 cut(s)	1262
EcoICRI	GAGCTC	2 cut(s)	966, 1350
EcoNI	CCTNNNNNAGG	1 cut(s)	2326
EcoO109I	RGGNCCY	2 cut(s)	1014, 2255
EcoRII	CCWGG	5 cut(s)	616, 1245, 1839, 1874, 2416
EcoT14I	CCWWGG	5 cut(s)	1590, 1714, 1809, 2160, 2226
EcoT38I	GRGCYC	3 cut(s)	968, 1279, 1352
ErhI	CCWWGG	5 cut(s)	1590, 1714, 1809, 2160, 2226
Esp3I	CGTCTC	2 cut(s)	163, 1648
FalI	AAGNNNNNCTT	4 cut(s)	1901, 1933, 2164, 2196
FaqI	GGGAC	5 cut(s)	833, 1027, 1803, 1928, 2033
FblI	GTMKAC	1 cut(s)	2353
FokI	GGATG	4 cut(s)	359, 1792, 2143, 2291
FriOI	GRGCYC	3 cut(s)	968, 1279, 1352
FspBI	CTAG	4 cut(s)	1376, 1497, 1580, 2379
GlaI	GCGC	1 cut(s)	1098
GsaI	CCCAGC	2 cut(s)	299, 1282
GsuI	CTGGAG	2 cut(s)	538, 1867
HgaI	GACGC	5 cut(s)	3, 69, 86, 1406, 1826
HhaI	GCGC	1 cut(s)	1099
Hin1I	GRCGYC	3 cut(s)	14, 61, 78
Hin6I	GCGC	1 cut(s)	1097
HinP1I	GCGC	1 cut(s)	1097
HincII	GTYRAC	1 cut(s)	1966
HindII	GTYRAC	1 cut(s)	1966
HpaI	GTTAAC	1 cut(s)	1966
HphI	GGTGA	6 cut(s)	133, 1183, 1393, 1826, 1972, 2386
Hpy166II	GTNNAC	5 cut(s)	922, 1798, 1966, 2098, 2354
Hpy8I	GTNNAC	5 cut(s)	922, 1798, 1966, 2098, 2354
HpyAV	CCTTC	8 cut(s)	172, 1118, 1183, 1456, 1964, 1987, 2170, 2411
HpyCH4III	ACNGT	4 cut(s)	40, 857, 2045, 2059
HpyCH4IV	ACGT	3 cut(s)	280, 548, 2100
HpyF3I	CTNAG	7 cut(s)	882, 900, 1337, 1635, 1673, 1695, 1949
HpySE526I	ACGT	3 cut(s)	280, 548, 2100
Hsp92I	GRCGYC	3 cut(s)	14, 61, 78
HspAI	GCGC	1 cut(s)	1097
KflI	GGGWCCC	1 cut(s)	1014
Kpn2I	TCCGGA	1 cut(s)	2190
KroI	GCCGGC	2 cut(s)	509, 1072
KroNI	GCCGGC	2 cut(s)	511, 1074
KspAI	GTTAAC	1 cut(s)	1966
KspI	CCGCGG	1 cut(s)	1233
LguI	GCTCTTC	1 cut(s)	2118
Lsp1109I	GCAGC	3 cut(s)	939, 1312, 1596
LweI	GCATC	5 cut(s)	731, 1074, 1248, 2165, 2269
MabI	ACCWGGT	1 cut(s)	1245
MaeI	CTAG	4 cut(s)	1376, 1497, 1580, 2379
MaeII	ACGT	3 cut(s)	280, 548, 2100
MaeIII	GTNAC	6 cut(s)	857, 1627, 1814, 1850, 2018, 2374
MbiI	CCGCTC	3 cut(s)	129, 337, 1453
MflI	RGATCY	1 cut(s)	1001
MhlI	GDGCHC	4 cut(s)	968, 1279, 1352, 1410
MluCI	AATT	8 cut(s)	20, 586, 595, 733, 1024, 1216, 1620, 2215
MlyI	GAGTC	8 cut(s)	377, 659, 874, 1058, 1274, 1441, 1673, 2383
MreI	CGCCGGCG	1 cut(s)	509
MroI	TCCGGA	1 cut(s)	2190
MroNI	GCCGGC	2 cut(s)	509, 1072
MseI	TTAA	3 cut(s)	68, 1898, 1965
MslI	CAYNNNNRTG	2 cut(s)	279, 1163
MspA1I	CMGCKG	3 cut(s)	1232, 1393, 1865
MspR9I	CCNGG	9 cut(s)	435, 487, 618, 1018, 1247, 1274, 1841, 1876, 2418
MvaI	CCWGG	5 cut(s)	618, 1247, 1841, 1876, 2418
MvnI	CGCG	4 cut(s)	1097, 1232, 1400, 2286
NaeI	GCCGGC	2 cut(s)	511, 1074
NciI	CCSGG	4 cut(s)	435, 487, 1018, 1274
NcoI	CCATGG	2 cut(s)	1714, 2226
NgoMIV	GCCGGC	2 cut(s)	509, 1072
NheI	GCTAGC	1 cut(s)	1375
NlaIV	GGNNCC	9 cut(s)	148, 438, 491, 622, 1015, 1016, 1068, 1277, 1692
NmeAIII	GCCGAG	2 cut(s)	1072, 1125
NmuCI	GTSAC	5 cut(s)	1627, 1814, 1850, 2018, 2374
NruI	TCGCGA	1 cut(s)	2286
NspI	RCATGY	3 cut(s)	751, 1732, 2036
NspV	TTCGAA	1 cut(s)	174
PaeI	GCATGC	1 cut(s)	2036
PaeR7I	CTCGAG	1 cut(s)	1262
PceI	AGGCCT	1 cut(s)	572
PciI	ACATGT	1 cut(s)	1728
PciSI	GCTCTTC	1 cut(s)	2118
PdiI	GCCGGC	2 cut(s)	511, 1074
PfeI	GAWTC	5 cut(s)	677, 995, 1859, 2249, 2471
PflFI	GACNNNGTC	5 cut(s)	80, 883, 1018, 1357, 2045
PinAI	ACCGGT	1 cut(s)	1800
Ple19I	CGATCG	1 cut(s)	949
PleI	GAGTC	8 cut(s)	377, 658, 874, 1057, 1273, 1440, 1673, 2383
PpsI	GAGTC	8 cut(s)	377, 658, 874, 1057, 1273, 1440, 1673, 2383
Ppu21I	YACGTR	1 cut(s)	2101
PpuMI	RGGWCCY	1 cut(s)	1014
PscI	ACATGT	1 cut(s)	1728
Psp124BI	GAGCTC	2 cut(s)	968, 1352
Psp5II	RGGWCCY	1 cut(s)	1014
Psp6I	CCWGG	5 cut(s)	616, 1245, 1839, 1874, 2416
PspFI	CCCAGC	2 cut(s)	295, 1278
PspGI	CCWGG	5 cut(s)	616, 1245, 1839, 1874, 2416
PspN4I	GGNNCC	9 cut(s)	148, 438, 491, 622, 1015, 1016, 1068, 1277, 1692
PspOMI	GGGCCC	1 cut(s)	1275
PspPPI	RGGWCCY	1 cut(s)	1014
PspXI	VCTCGAGB	1 cut(s)	1262
PsrI	GAACNNNNNNTAC	2 cut(s)	533, 565
PstI	CTGCAG	1 cut(s)	929
PstNI	CAGNNNCTG	1 cut(s)	2258
PsuI	RGATCY	1 cut(s)	1001
PsyI	GACNNNGTC	5 cut(s)	80, 883, 1018, 1357, 2045
PvuI	CGATCG	1 cut(s)	949
PvuII	CAGCTG	2 cut(s)	1393, 1865
RruI	TCGCGA	1 cut(s)	2286
RseI	CAYNNNNRTG	2 cut(s)	279, 1163
Rsr2I	CGGWCCG	1 cut(s)	1424
RsrII	CGGWCCG	1 cut(s)	1424
SacI	GAGCTC	2 cut(s)	968, 1352
SacII	CCGCGG	1 cut(s)	1233
SapI	GCTCTTC	1 cut(s)	2118
SaqAI	TTAA	3 cut(s)	68, 1898, 1965
ScaI	AGTACT	1 cut(s)	1132
SchI	GAGTC	8 cut(s)	377, 659, 874, 1058, 1274, 1441, 1673, 2383
ScrFI	CCNGG	9 cut(s)	435, 487, 618, 1018, 1247, 1274, 1841, 1876, 2418
SduI	GDGCHC	4 cut(s)	968, 1279, 1352, 1410
SexAI	ACCWGGT	1 cut(s)	1245
SfaNI	GCATC	5 cut(s)	731, 1074, 1248, 2165, 2269
SfcI	CTRYAG	2 cut(s)	925, 952
SfiI	GGCCNNNNNGGCC	1 cut(s)	1235
Sfr274I	CTCGAG	1 cut(s)	1262
Sfr303I	CCGCGG	1 cut(s)	1233
SfuI	TTCGAA	1 cut(s)	174
SgrAI	CRCCGGYG	1 cut(s)	509
SgrBI	CCGCGG	1 cut(s)	1233
SinI	GGWCC	5 cut(s)	55, 919, 1014, 1020, 1424
SlaI	CTCGAG	1 cut(s)	1262
SmiMI	CAYNNNNRTG	2 cut(s)	279, 1163
SmlI	CTYRAG	3 cut(s)	1262, 1304, 1324
SmoI	CTYRAG	3 cut(s)	1262, 1304, 1324
SphI	GCATGC	1 cut(s)	2036
Sse9I	AATT	8 cut(s)	20, 586, 595, 733, 1024, 1216, 1620, 2215
SseBI	AGGCCT	1 cut(s)	572
SspMI	CTAG	4 cut(s)	1376, 1497, 1580, 2379
SstI	GAGCTC	2 cut(s)	968, 1352
StuI	AGGCCT	1 cut(s)	572
StyD4I	CCNGG	9 cut(s)	433, 485, 616, 1016, 1245, 1272, 1839, 1874, 2416
StyI	CCWWGG	5 cut(s)	1590, 1714, 1809, 2160, 2226
TaaI	ACNGT	4 cut(s)	40, 857, 2045, 2059
TaiI	ACGT	3 cut(s)	283, 551, 2103
TaqII	GACCGA	1 cut(s)	72
TasI	AATT	8 cut(s)	20, 586, 595, 733, 1024, 1216, 1620, 2215
TatI	WGTACW	6 cut(s)	729, 1130, 1554, 1725, 1774, 2480
TfiI	GAWTC	5 cut(s)	677, 995, 1859, 2249, 2471
Tru1I	TTAA	3 cut(s)	68, 1898, 1965
Tru9I	TTAA	3 cut(s)	68, 1898, 1965
TscAI	CASTG	5 cut(s)	929, 1150, 2064, 2373, 2439
TseFI	GTSAC	5 cut(s)	1627, 1814, 1850, 2018, 2374
TseI	GCWGC	4 cut(s)	6, 927, 1300, 1609
Tsp45I	GTSAC	5 cut(s)	1627, 1814, 1850, 2018, 2374
TspDTI	ATGAA	5 cut(s)	86, 1175, 1770, 1922, 2074
TspGWI	ACGGA	4 cut(s)	249, 568, 597, 836
TspRI	CASTG	5 cut(s)	929, 1150, 2064, 2373, 2439
Tth111I	GACNNNGTC	5 cut(s)	80, 883, 1018, 1357, 2045
VpaK11BI	GGWCC	5 cut(s)	55, 919, 1014, 1020, 1424
XagI	CCTNNNNNAGG	1 cut(s)	2326
XapI	RAATTY	2 cut(s)	595, 1216
XceI	RCATGY	3 cut(s)	751, 1732, 2036
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1931
XhoI	CTCGAG	1 cut(s)	1262
XmiI	GTMKAC	1 cut(s)	2353
XspI	CTAG	4 cut(s)	1376, 1497, 1580, 2379
ZrmI	AGTACT	1 cut(s)	1132

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.