Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0007126

Physical Location & Seq

Genomic Coordinates Forward (+)

39775598 .. 39781890

Gene Structure 6293 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG203000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2508 bp

ATGGGCTGCACGGCGTCCAAATTGGACAACGAGGACACTGTGCGGCGGTGCAAGGACCGACGCCGTTTAATGAAAGACGCCGTCTTCGCCCGCCACCACCTCGCCGCCGCTCACGCCGACTACTGCCGCTCCCTCCGCCTCACCGGCTCCGCCCTCGTCTCCTTCGCCAACTTCGAACCCCTCTCCATCTCCGACCAAACCCCCGCCGTCTTCCTCCACCCTACTACTACCACTTCCAACCCCTCTCCTCCTCCTCCTCCCTCCAATCCCCTCCACCCACGTGCCCCTCCCTCCCCAGCTCCCTCCTCCCTCCACCCCCCTCCGCCGCCTCCGCCGGTCTCCCCCACCATCGCCAGCTCCAAGCTCCCCCACATCCTCTCCGACTCCTCCCTCTCCTCCTCCCGCCGCCACCGCCGCCGGAGACAGCCTCCGCCGGGGCCGAAGCTCCCGCACATACTCTCCGACACCAGCCCCTCCTCCACTCCCCGGAGCCAGAACTCGAACTTCACCGGCGGCGGATTTCCGACGGCCTTTCAGGCGAACTCGACGTACTCCAGCACGCCGTCGCAGGCCTCCTCCGTGTGGAATTGGGAGAATTTCTACCCTCCGTCGCCGCCGGGCTCCGATTTTTTCAACCAGAGAGAGCAGGAGTCCAAACAATCCCACCACCTCGACGATTCCGACGACGACGACGACAACACCGAGCCGGAAACCGAAACCGAGGAGGCATCGGAGTACAATTACTTCCACAACATGCCCAAATCCCAACCCACCGCCCGCCAAAACCACTCGTATTCTCAGTCGGAGAAGTACGCCCAGTCCGAAACCGAGAGATCAGAGTACGATTTCTTCGTCCCCAGCCGTAACCCTAAAGCTCCGGCCAAGACTCAGTCGGAGAAGTACGCTCAGTCGGAGAGAGAAGAGGTCCACTGCAGCGAGTGGGGCGATCACGATCGCTACAGCACCACGAGCTCGTCTGAAAACGAAGACGACGACAGGGATTCGAGATCCGAGATGGGGACCCGGTCCAATTTCGACCCGTCGGTTCGGGCCGAGTCGGTCGCGGGGTCGGTGCCGCCGGCCCAGACGATGCCGAAGTACGCGCCGAGCATGAGGTCGGAGGGGTCGGAAGGGAGTACTTACCGGAGCAGTGAAATCTCGAACATGAAAATGGTGGTGAGGCATAAAGACTTGAAGGAGATTGTGCAGGCGATCAAGGAGAATTTCGATAAGGCCGCGGCGGCCGGAGACCAGGTTTCCGAGATGCTCGAGTCCAACCGGGCCCAGCTTGATCGGAGCTTCAAGCAGCTCAAGAAGAAAGTGTATCACTCAAGTAGTGTGCTTAGCACATTGAGCTCGACTTGGTCGTCGAAGCCGCCGCTAGCGGTGAAGTACCAGCTGGACGCGGCGGTGCTCAATGCACAGGGCGGTCCGAAGAGTCTATGTTCCACCTTCGAGCGGCTTTTGGCTTGGGAGAAGAAGCTCTATGAGGAAGTCAAGGCTAGAGAAAGTGTAAAGATTGAACATGAGAAGAAGTTATCTTCACTACAAAATCAGGAGTACAAGGGAGAGGACGAAATCAAGCTAGACAAGACCAAGGCTTCAATAAAGAGGCTGCAATCACTAATTATTGTCACATCTCAGGCCGTCTCAACCACGTCAACTGCCATCATTGATCTTAGAGACTCTGATCTTGTTCCTCAGCTTGTTGAGCTGTGCCATGGGTTTATGTACATGTGGAAATCAATGCACCAGTACCATGAAGTCCAGAACAACATTGTACAGCAAGTTAGGGGACTTGTGAACCTGTCATCCAAGGGTGACGCAACCTCCGAACTGCACCGCCAGGCAACTCGTGACTTGGAATCAGCTGTTTCTGCCTGGCACTCCAGCTTTTGCCGCTTAATAAAGTACAAGCGGGACTTTATCCAGTCTGTTCATGGTTGGTTCAAGCTCAGCCTTCTTCCTGTTAACAATGACACCTTCACCGGCAACAATGAGCCTTCTGATGTATATTTCTTCTGTGACGAGTGGAAGCATGCACTTGACCGTGTCCCTGACACAGTGGCTTCAGAGGCAATCAAGAGCTTCATCAATGTTGTCCACGTAATCTCCATAAAACAAAGTGAAGAGCTGAAGATGAAAAAAAGAACTGAAGCTGCATCCAAGGAGCTTGAAAAGAAGGCTTCTTCTGTCCGGAACATTGAAAAGAAGTTCTATAATTCCTACTCTATGGTTGGTATTGGACTTCCCGATTCAGGGCCTGATGGGCAAGGTTTGGATGCTCGCGACCCGCTTGCTGAAAAGAAATCTGAACTTGCAACCTCCCAGAGGCGGGTTGAAGAAGAAATGAGTAGGCATTCAAAGGCAGTGGTGGTGACTAGAGCAATGACTCTAAACAACCTTCAAACAGGGTTGCCAGGGGTTTTTCAAGCACTGACGAGTTTTTCTGGGTTATTTACAGAGGCACTCGAGTCAGTTTGTACTCGTTCCTACTCCATCAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006810 GO:0006811 GO:0006820 GO:0008150 GO:0009987 GO:0010035 GO:0010167 GO:0015698 GO:0015706 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0070887 GO:0071229 GO:0071241 GO:0071249 GO:0071705 GO:1901698 GO:1901699 GO:1901700 GO:1901701 GO:1902170

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF630 DUF632

Protein Analysis

835

Amino Acids

93.42

Weight (kDa)

6.85

Isoelectric Point (pI)

67.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF630	PF04783	1 - 57	9.5e-24	Protein of unknown function (DUF630)
DUF632	PF04782	398 - 702	2.2e-105	Protein of unknown function (DUF632)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007126)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02110 AT3G60320
fragaria_vesca	FvH4_7g10170
malus_domestica	MD02G1212400.v1.1 MD07G1108500.v1.1 MD07G1108600.v1.1
prunus_persica	Prupe.2G131300_v2.0.a1 Prupe.2G131300_v2.0.a1 Prupe.2G131300_v2.0.a1 Prupe.2G131300_v2.0.a1 Prupe.2G131300_v2.0.a1
pyrus_communis	pycom02g17630 pycom07g09310
rosa_chinensis	RchiOBHm_Chr1g0347891
rosa_laevigata	RLG00000028706
rosa_multiflora	Rmu_co8367439.1_g000001 Rmu_ssc0000342.1_g000007
rosa_roxburghii	Rroxscaffold_4G00307400
rosa_rugosa	Rorug01G0190300 Rorug01G0190400
rosa_samantha	Rh1AG208500 Rh1BG173100 Rh1CG192800 Rh1DG203000
rosa_wichuraiana	Rw1G017330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1366
AccB1I	GGYRCC	1 cut(s)	1072
AccBSI	CCGCTC	3 cut(s)	110, 129, 1459
AccII	CGCG	5 cut(s)	1064, 1103, 1238, 1406, 2289
AccIII	TCCGGA	1 cut(s)	2196
AclWI	GGATC	1 cut(s)	1002
AcoI	YGGCCR	2 cut(s)	879, 1242
AcsI	RAATTY	2 cut(s)	595, 1222
AcuI	CTGAAG	3 cut(s)	2055, 2156, 2175
AcvI	CACGTG	1 cut(s)	281
AcyI	GRCGYC	3 cut(s)	14, 61, 78
AflIII	ACRYGT	1 cut(s)	1734
AjiI	CACGTC	1 cut(s)	1659
AjnI	CCWGG	4 cut(s)	1251, 1845, 1880, 2419
AleI	CACNNNNGTG	1 cut(s)	279
AloI	GAACNNNNNNTCC	2 cut(s)	1796, 1828
Alw21I	GWGCWC	3 cut(s)	974, 1358, 1416
Alw26I	GTCTC	6 cut(s)	163, 343, 415, 1242, 1654, 1677
AlwI	GGATC	1 cut(s)	1002
AlwNI	CAGNNNCTG	1 cut(s)	2264
Ama87I	CYCGRG	2 cut(s)	1268, 2471
Aor13HI	TCCGGA	1 cut(s)	2196
ApaI	GGGCCC	1 cut(s)	1285
ApeKI	GCWGC	5 cut(s)	6, 933, 1306, 1615, 2159
ApoI	RAATTY	2 cut(s)	595, 1222
ArsI	GACNNNNNNTTYG	2 cut(s)	68, 100
AspLEI	GCGC	1 cut(s)	1105
AsuC2I	CCSGG	5 cut(s)	435, 487, 618, 1024, 1280
AsuHPI	GGTGA	7 cut(s)	133, 499, 1189, 1399, 1832, 1978, 2389
AsuII	TTCGAA	1 cut(s)	174
AsuNHI	GCTAGC	1 cut(s)	1381
AvaI	CYCGRG	2 cut(s)	1268, 2471
AvaII	GGWCC	5 cut(s)	55, 925, 1020, 1026, 1430
BaeGI	GKGCMC	2 cut(s)	286, 1285
BanI	GGYRCC	1 cut(s)	1072
BanII	GRGCYC	4 cut(s)	623, 974, 1285, 1358
BarI	GAAGNNNNNNTAC	4 cut(s)	728, 760, 833, 865
BauI	CACGAG	2 cut(s)	967, 1854
BbrPI	CACGTG	1 cut(s)	281
BbsI	GAAGAC	3 cut(s)	76, 202, 993
Bbv12I	GWGCWC	3 cut(s)	974, 1358, 1416
BbvCI	CCTCAGC	1 cut(s)	1701
BbvI	GCAGC	4 cut(s)	945, 1318, 1602, 2146
BccI	CCATC	6 cut(s)	194, 356, 1009, 1676, 2261, 2507
BceAI	ACGGC	8 cut(s)	27, 48, 65, 191, 543, 547, 846, 1631
BcgI	CGANNNNNNTGC	2 cut(s)	2279, 2313
BciT130I	CCWGG	4 cut(s)	1253, 1847, 1882, 2421
BcnI	CCSGG	5 cut(s)	435, 487, 618, 1024, 1280
BcoDI	GTCTC	6 cut(s)	163, 343, 415, 1242, 1654, 1677
BfaI	CTAG	4 cut(s)	1382, 1503, 1586, 2382
BfmI	CTRYAG	2 cut(s)	931, 958
BglI	GCCNNNNNGGC	4 cut(s)	144, 536, 1241, 2269
BlpI	GCTNAGC	2 cut(s)	1343, 1955
BmcAI	AGTACT	1 cut(s)	1138
Bme1390I	CCNGG	9 cut(s)	435, 487, 618, 1024, 1253, 1280, 1847, 1882, 2421
Bme18I	GGWCC	5 cut(s)	55, 925, 1020, 1026, 1430
BmeT110I	CYCGRG	2 cut(s)	1268, 2471
BmgBI	CACGTC	1 cut(s)	1659
BmiI	GGNNCC	8 cut(s)	148, 438, 491, 622, 1021, 1022, 1074, 1283
BmrFI	CCNGG	9 cut(s)	435, 487, 618, 1024, 1253, 1280, 1847, 1882, 2421
BmrI	ACTGGG	1 cut(s)	811
BmsI	GCATC	5 cut(s)	737, 1080, 1254, 2171, 2272
BmtI	GCTAGC	1 cut(s)	1385
BmuI	ACTGGG	1 cut(s)	811
BpiI	GAAGAC	3 cut(s)	76, 202, 993
BplI	GAGNNNNNCTC	2 cut(s)	412, 444
BpmI	CTGGAG	2 cut(s)	538, 1873
Bpu10I	CCTNAGC	1 cut(s)	1701
Bpu1102I	GCTNAGC	2 cut(s)	1343, 1955
Bpu14I	TTCGAA	1 cut(s)	174
BpuEI	CTTGAG	2 cut(s)	1295, 1315
BpuMI	CCSGG	5 cut(s)	435, 487, 618, 1024, 1280
BsaAI	YACGTR	2 cut(s)	281, 2107
BsaBI	GATNNNNATC	1 cut(s)	951
BsaHI	GRCGYC	3 cut(s)	14, 61, 78
BsaI	GGTCTC	2 cut(s)	343, 1242
BsaJI	CCNNGG	9 cut(s)	434, 485, 720, 1236, 1596, 1720, 1815, 2166, 2420
BsaWI	WCCGGW	2 cut(s)	1143, 2196
Bse118I	RCCGGY	5 cut(s)	143, 334, 509, 1078, 1988
Bse1I	ACTGG	3 cut(s)	817, 1753, 1930
Bse3DI	GCAATG	1 cut(s)	2394
Bse8I	GATNNNNATC	1 cut(s)	951
BseAI	TCCGGA	1 cut(s)	2196
BseBI	CCWGG	4 cut(s)	1253, 1847, 1882, 2421
BseDI	CCNNGG	9 cut(s)	434, 485, 720, 1236, 1596, 1720, 1815, 2166, 2420
BseGI	GGATG	4 cut(s)	372, 1811, 2162, 2287
BseJI	GATNNNNATC	1 cut(s)	951
BseMI	GCAATG	1 cut(s)	2394
BseMII	CTCAG	6 cut(s)	812, 902, 920, 1655, 1715, 1969
BseNI	ACTGG	3 cut(s)	817, 1753, 1930
BseSI	GKGCMC	2 cut(s)	286, 1285
BseX3I	CGGCCG	1 cut(s)	1242
BseXI	GCAGC	4 cut(s)	945, 1318, 1602, 2146
BseYI	CCCAGC	3 cut(s)	295, 857, 1284
BsgI	GTGCAG	2 cut(s)	1226, 1823
Bsh1236I	CGCG	5 cut(s)	1064, 1103, 1238, 1406, 2289
Bsh1285I	CGRYCG	3 cut(s)	955, 1062, 1245
BshNI	GGYRCC	1 cut(s)	1072
BsiEI	CGRYCG	3 cut(s)	955, 1062, 1245
BsiHKAI	GWGCWC	3 cut(s)	974, 1358, 1416
BsiHKCI	CYCGRG	2 cut(s)	1268, 2471
BslFI	GGGAC	5 cut(s)	839, 1033, 1809, 1934, 2039
BsmAI	GTCTC	6 cut(s)	163, 343, 415, 1242, 1654, 1677
BsmBI	CGTCTC	2 cut(s)	163, 1654
BsmFI	GGGAC	5 cut(s)	839, 1033, 1809, 1934, 2039
BsmI	GAATGC	1 cut(s)	2359
Bso31I	GGTCTC	2 cut(s)	343, 1242
BsoBI	CYCGRG	2 cut(s)	1268, 2471
Bsp119I	TTCGAA	1 cut(s)	174
Bsp120I	GGGCCC	1 cut(s)	1281
Bsp1286I	GDGCHC	6 cut(s)	286, 623, 974, 1285, 1358, 1416
Bsp13I	TCCGGA	1 cut(s)	2196
Bsp1407I	TGTACA	2 cut(s)	1731, 1780
Bsp143I	GATC	8 cut(s)	833, 946, 952, 1007, 1212, 1291, 1675, 1690
Bsp1720I	GCTNAGC	2 cut(s)	1343, 1955
Bsp19I	CCATGG	1 cut(s)	1720
Bsp68I	TCGCGA	1 cut(s)	2289
BspCNI	CTCAG	6 cut(s)	811, 901, 919, 1654, 1714, 1968
BspEI	TCCGGA	1 cut(s)	2196
BspFNI	CGCG	5 cut(s)	1064, 1103, 1238, 1406, 2289
BspLI	GGNNCC	8 cut(s)	148, 438, 491, 622, 1021, 1022, 1074, 1283
BspMAI	CTGCAG	1 cut(s)	935
BspOI	GCTAGC	1 cut(s)	1385
BspPI	GGATC	1 cut(s)	1002
BspQI	GCTCTTC	1 cut(s)	2124
BspT104I	TTCGAA	1 cut(s)	174
BspT107I	GGYRCC	1 cut(s)	1072
BspTNI	GGTCTC	2 cut(s)	343, 1242
BsrBI	CCGCTC	3 cut(s)	110, 129, 1459
BsrDI	GCAATG	1 cut(s)	2394
BsrFI	RCCGGY	5 cut(s)	143, 334, 509, 1078, 1988
BsrGI	TGTACA	2 cut(s)	1731, 1780
BsrI	ACTGG	3 cut(s)	817, 1753, 1930
BssAI	RCCGGY	5 cut(s)	143, 334, 509, 1078, 1988
BssECI	CCNNGG	9 cut(s)	434, 485, 720, 1236, 1596, 1720, 1815, 2166, 2420
BssMI	GATC	8 cut(s)	833, 946, 952, 1007, 1212, 1291, 1675, 1690
BssNI	GRCGYC	3 cut(s)	14, 61, 78
BssSI	CACGAG	2 cut(s)	967, 1854
BssT1I	CCWWGG	4 cut(s)	1596, 1720, 1815, 2166
Bst2BI	CACGAG	2 cut(s)	967, 1854
Bst2UI	CCWGG	4 cut(s)	1253, 1847, 1882, 2421
Bst4CI	ACNGT	3 cut(s)	40, 2051, 2065
Bst6I	CTCTTC	3 cut(s)	915, 1430, 2124
BstACI	GRCGYC	3 cut(s)	14, 61, 78
BstAUI	TGTACA	2 cut(s)	1731, 1780
BstBAI	YACGTR	2 cut(s)	281, 2107
BstBI	TTCGAA	1 cut(s)	174
BstDEI	CTNAG	8 cut(s)	798, 888, 906, 1343, 1641, 1679, 1701, 1955
BstDSI	CCRYGG	2 cut(s)	1236, 1720
BstENI	CCTNNNNNAGG	1 cut(s)	2329
BstF5I	GGATG	4 cut(s)	372, 1811, 2162, 2287
BstFNI	CGCG	5 cut(s)	1064, 1103, 1238, 1406, 2289
BstHHI	GCGC	1 cut(s)	1105
BstKTI	GATC	8 cut(s)	836, 949, 955, 1010, 1215, 1294, 1678, 1693
BstMAI	GTCTC	6 cut(s)	163, 343, 415, 1242, 1654, 1677
BstMBI	GATC	8 cut(s)	833, 946, 952, 1007, 1212, 1291, 1675, 1690
BstMCI	CGRYCG	3 cut(s)	955, 1062, 1245
BstNI	CCWGG	4 cut(s)	1253, 1847, 1882, 2421
BstNSI	RCATGY	3 cut(s)	757, 1738, 2042
BstSCI	CCNGG	9 cut(s)	433, 485, 616, 1022, 1251, 1278, 1845, 1880, 2419
BstSFI	CTRYAG	2 cut(s)	931, 958
BstSLI	GKGCMC	2 cut(s)	286, 1285
BstUI	CGCG	5 cut(s)	1064, 1103, 1238, 1406, 2289
BstV1I	GCAGC	4 cut(s)	945, 1318, 1602, 2146
BstV2I	GAAGAC	3 cut(s)	76, 202, 993
BstX2I	RGATCY	1 cut(s)	1007
BstYI	RGATCY	1 cut(s)	1007
BstZI	CGGCCG	1 cut(s)	1242
BtgI	CCRYGG	2 cut(s)	1236, 1720
BtgZI	GCGATG	1 cut(s)	334
BtrI	CACGTC	1 cut(s)	1659
BtsCI	GGATG	4 cut(s)	372, 1811, 2162, 2287
BtsI	GCAGTG	3 cut(s)	928, 1156, 2376
BtsIMutI	CAGTG	6 cut(s)	36, 928, 1156, 2070, 2376, 2435
BtuMI	TCGCGA	1 cut(s)	2289
CaiI	CAGNNNCTG	1 cut(s)	2264
CfoI	GCGC	1 cut(s)	1105
Cfr10I	RCCGGY	5 cut(s)	143, 334, 509, 1078, 1988
Cfr42I	CCGCGG	1 cut(s)	1239
CpoI	CGGWCCG	1 cut(s)	1430
CseI	GACGC	5 cut(s)	3, 69, 86, 1412, 1832
CsiI	ACCWGGT	1 cut(s)	1251
CspCI	CAANNNNNGTGG	2 cut(s)	2352, 2387
CspI	CGGWCCG	1 cut(s)	1430
CviAII	CATG	9 cut(s)	754, 1111, 1165, 1526, 1721, 1735, 1760, 1940, 2039
DdeI	CTNAG	8 cut(s)	798, 888, 906, 1343, 1641, 1679, 1701, 1955
DpnI	GATC	8 cut(s)	835, 948, 954, 1009, 1214, 1293, 1677, 1692
DpnII	GATC	8 cut(s)	833, 946, 952, 1007, 1212, 1291, 1675, 1690
DrdI	GACNNNNNNGTC	1 cut(s)	1366
DseDI	GACNNNNNNGTC	1 cut(s)	1366
EaeI	YGGCCR	2 cut(s)	879, 1242
EagI	CGGCCG	1 cut(s)	1242
Eam1104I	CTCTTC	3 cut(s)	915, 1430, 2124
EarI	CTCTTC	3 cut(s)	915, 1430, 2124
EciI	GGCGGA	6 cut(s)	125, 139, 312, 321, 420, 531
Ecl136II	GAGCTC	2 cut(s)	972, 1356
EclXI	CGGCCG	1 cut(s)	1242
Eco130I	CCWWGG	4 cut(s)	1596, 1720, 1815, 2166
Eco147I	AGGCCT	1 cut(s)	572
Eco24I	GRGCYC	4 cut(s)	623, 974, 1285, 1358
Eco31I	GGTCTC	2 cut(s)	343, 1242
Eco47I	GGWCC	5 cut(s)	55, 925, 1020, 1026, 1430
Eco52I	CGGCCG	1 cut(s)	1242
Eco53kI	GAGCTC	2 cut(s)	972, 1356
Eco57I	CTGAAG	3 cut(s)	2055, 2156, 2175
Eco72I	CACGTG	1 cut(s)	281
Eco88I	CYCGRG	2 cut(s)	1268, 2471
EcoICRI	GAGCTC	2 cut(s)	972, 1356
EcoNI	CCTNNNNNAGG	1 cut(s)	2329
EcoO109I	RGGNCCY	2 cut(s)	1020, 2261
EcoRII	CCWGG	4 cut(s)	1251, 1845, 1880, 2419
EcoT14I	CCWWGG	4 cut(s)	1596, 1720, 1815, 2166
EcoT38I	GRGCYC	4 cut(s)	623, 974, 1285, 1358
ErhI	CCWWGG	4 cut(s)	1596, 1720, 1815, 2166
Esp3I	CGTCTC	2 cut(s)	163, 1654
FaeI	CATG	9 cut(s)	757, 1114, 1168, 1529, 1724, 1738, 1763, 1943, 2042
FalI	AAGNNNNNCTT	2 cut(s)	1907, 1939
FaqI	GGGAC	5 cut(s)	839, 1033, 1809, 1934, 2039
FatI	CATG	9 cut(s)	753, 1110, 1164, 1525, 1720, 1734, 1759, 1939, 2038
FauI	CCCGC	9 cut(s)	98, 211, 410, 456, 785, 1057, 1911, 2301, 2328
FokI	GGATG	4 cut(s)	359, 1798, 2149, 2294
FriOI	GRGCYC	4 cut(s)	623, 974, 1285, 1358
FspBI	CTAG	4 cut(s)	1382, 1503, 1586, 2382
GlaI	GCGC	1 cut(s)	1104
GsaI	CCCAGC	3 cut(s)	299, 861, 1288
GsuI	CTGGAG	2 cut(s)	538, 1873
HgaI	GACGC	5 cut(s)	3, 69, 86, 1412, 1832
HhaI	GCGC	1 cut(s)	1105
Hin1I	GRCGYC	3 cut(s)	14, 61, 78
Hin1II	CATG	9 cut(s)	757, 1114, 1168, 1529, 1724, 1738, 1763, 1943, 2042
Hin6I	GCGC	1 cut(s)	1103
HinP1I	GCGC	1 cut(s)	1103
HincII	GTYRAC	2 cut(s)	1662, 1972
HindII	GTYRAC	2 cut(s)	1662, 1972
HpaI	GTTAAC	1 cut(s)	1972
HphI	GGTGA	7 cut(s)	133, 499, 1189, 1399, 1832, 1978, 2389
Hpy166II	GTNNAC	5 cut(s)	928, 1662, 1804, 1972, 2104
Hpy8I	GTNNAC	5 cut(s)	928, 1662, 1804, 1972, 2104
HpyAV	CCTTC	9 cut(s)	172, 1124, 1189, 1462, 1970, 1993, 2013, 2176, 2414
HpyCH4III	ACNGT	3 cut(s)	40, 2051, 2065
HpyCH4IV	ACGT	4 cut(s)	280, 548, 1658, 2106
HpyF3I	CTNAG	8 cut(s)	798, 888, 906, 1343, 1641, 1679, 1701, 1955
HpySE526I	ACGT	4 cut(s)	280, 548, 1658, 2106
Hsp92I	GRCGYC	3 cut(s)	14, 61, 78
Hsp92II	CATG	9 cut(s)	757, 1114, 1168, 1529, 1724, 1738, 1763, 1943, 2042
HspAI	GCGC	1 cut(s)	1103
KflI	GGGWCCC	1 cut(s)	1020
Kpn2I	TCCGGA	1 cut(s)	2196
KroI	GCCGGC	1 cut(s)	1078
KroNI	GCCGGC	1 cut(s)	1080
KspAI	GTTAAC	1 cut(s)	1972
KspI	CCGCGG	1 cut(s)	1239
Kzo9I	GATC	8 cut(s)	833, 946, 952, 1007, 1212, 1291, 1675, 1690
LguI	GCTCTTC	1 cut(s)	2124
Lsp1109I	GCAGC	4 cut(s)	945, 1318, 1602, 2146
LweI	GCATC	5 cut(s)	737, 1080, 1254, 2171, 2272
MabI	ACCWGGT	1 cut(s)	1251
MaeI	CTAG	4 cut(s)	1382, 1503, 1586, 2382
MaeII	ACGT	4 cut(s)	280, 548, 1658, 2106
MaeIII	GTNAC	6 cut(s)	863, 1633, 1820, 1856, 2024, 2377
MalI	GATC	8 cut(s)	835, 948, 954, 1009, 1214, 1293, 1677, 1692
MbiI	CCGCTC	3 cut(s)	110, 129, 1459
MboI	GATC	8 cut(s)	833, 946, 952, 1007, 1212, 1291, 1675, 1690
MflI	RGATCY	1 cut(s)	1007
MhlI	GDGCHC	6 cut(s)	286, 623, 974, 1285, 1358, 1416
MluCI	AATT	8 cut(s)	20, 586, 595, 739, 1030, 1222, 1626, 2221
MlyI	GAGTC	9 cut(s)	377, 659, 880, 1064, 1280, 1447, 1679, 2386, 2483
MroI	TCCGGA	1 cut(s)	2196
MroNI	GCCGGC	1 cut(s)	1078
MseI	TTAA	3 cut(s)	68, 1904, 1971
MslI	CAYNNNNRTG	2 cut(s)	279, 1169
MspA1I	CMGCKG	3 cut(s)	1238, 1399, 1871
MspR9I	CCNGG	9 cut(s)	435, 487, 618, 1024, 1253, 1280, 1847, 1882, 2421
Mva1269I	GAATGC	1 cut(s)	2359
MvaI	CCWGG	4 cut(s)	1253, 1847, 1882, 2421
MvnI	CGCG	5 cut(s)	1064, 1103, 1238, 1406, 2289
NaeI	GCCGGC	1 cut(s)	1080
NciI	CCSGG	5 cut(s)	435, 487, 618, 1024, 1280
NcoI	CCATGG	1 cut(s)	1720
NdeII	GATC	8 cut(s)	833, 946, 952, 1007, 1212, 1291, 1675, 1690
NgoMIV	GCCGGC	1 cut(s)	1078
NheI	GCTAGC	1 cut(s)	1381
NlaIII	CATG	9 cut(s)	757, 1114, 1168, 1529, 1724, 1738, 1763, 1943, 2042
NlaIV	GGNNCC	8 cut(s)	148, 438, 491, 622, 1021, 1022, 1074, 1283
NmeAIII	GCCGAG	2 cut(s)	1078, 1131
NmuCI	GTSAC	5 cut(s)	1633, 1820, 1856, 2024, 2377
NruI	TCGCGA	1 cut(s)	2289
NspI	RCATGY	3 cut(s)	757, 1738, 2042
NspV	TTCGAA	1 cut(s)	174
OliI	CACNNNNGTG	1 cut(s)	279
PaeI	GCATGC	1 cut(s)	2042
PaeR7I	CTCGAG	2 cut(s)	1268, 2471
PceI	AGGCCT	1 cut(s)	572
PciI	ACATGT	1 cut(s)	1734
PciSI	GCTCTTC	1 cut(s)	2124
PctI	GAATGC	1 cut(s)	2359
PdiI	GCCGGC	1 cut(s)	1080
PfeI	GAWTC	4 cut(s)	677, 1001, 1865, 2255
PflFI	GACNNNGTC	5 cut(s)	80, 889, 1024, 1363, 2051
Ple19I	CGATCG	1 cut(s)	955
PleI	GAGTC	9 cut(s)	377, 658, 880, 1063, 1279, 1446, 1679, 2386, 2482
PmaCI	CACGTG	1 cut(s)	281
PmlI	CACGTG	1 cut(s)	281
PpsI	GAGTC	9 cut(s)	377, 658, 880, 1063, 1279, 1446, 1679, 2386, 2482
Ppu21I	YACGTR	2 cut(s)	281, 2107
PpuMI	RGGWCCY	1 cut(s)	1020
PscI	ACATGT	1 cut(s)	1734
Psp124BI	GAGCTC	2 cut(s)	974, 1358
Psp5II	RGGWCCY	1 cut(s)	1020
Psp6I	CCWGG	4 cut(s)	1251, 1845, 1880, 2419
PspCI	CACGTG	1 cut(s)	281
PspFI	CCCAGC	3 cut(s)	295, 857, 1284
PspGI	CCWGG	4 cut(s)	1251, 1845, 1880, 2419
PspN4I	GGNNCC	8 cut(s)	148, 438, 491, 622, 1021, 1022, 1074, 1283
PspOMI	GGGCCC	1 cut(s)	1281
PspPPI	RGGWCCY	1 cut(s)	1020
PspXI	VCTCGAGB	2 cut(s)	1268, 2471
PsrI	GAACNNNNNNTAC	2 cut(s)	533, 565
PstI	CTGCAG	1 cut(s)	935
PstNI	CAGNNNCTG	1 cut(s)	2264
PsuI	RGATCY	1 cut(s)	1007
PsyI	GACNNNGTC	5 cut(s)	80, 889, 1024, 1363, 2051
PvuI	CGATCG	1 cut(s)	955
PvuII	CAGCTG	2 cut(s)	1399, 1871
RruI	TCGCGA	1 cut(s)	2289
RseI	CAYNNNNRTG	2 cut(s)	279, 1169
Rsr2I	CGGWCCG	1 cut(s)	1430
RsrII	CGGWCCG	1 cut(s)	1430
SacI	GAGCTC	2 cut(s)	974, 1358
SacII	CCGCGG	1 cut(s)	1239
SapI	GCTCTTC	1 cut(s)	2124
SaqAI	TTAA	3 cut(s)	68, 1904, 1971
Sau3AI	GATC	8 cut(s)	833, 946, 952, 1007, 1212, 1291, 1675, 1690
ScaI	AGTACT	1 cut(s)	1138
SchI	GAGTC	9 cut(s)	377, 659, 880, 1064, 1280, 1447, 1679, 2386, 2483
ScrFI	CCNGG	9 cut(s)	435, 487, 618, 1024, 1253, 1280, 1847, 1882, 2421
SduI	GDGCHC	6 cut(s)	286, 623, 974, 1285, 1358, 1416
SexAI	ACCWGGT	1 cut(s)	1251
SfaNI	GCATC	5 cut(s)	737, 1080, 1254, 2171, 2272
SfcI	CTRYAG	2 cut(s)	931, 958
SfiI	GGCCNNNNNGGCC	1 cut(s)	1241
Sfr274I	CTCGAG	2 cut(s)	1268, 2471
Sfr303I	CCGCGG	1 cut(s)	1239
SfuI	TTCGAA	1 cut(s)	174
SgrAI	CRCCGGYG	1 cut(s)	509
SgrBI	CCGCGG	1 cut(s)	1239
SinI	GGWCC	5 cut(s)	55, 925, 1020, 1026, 1430
SlaI	CTCGAG	2 cut(s)	1268, 2471
SmiMI	CAYNNNNRTG	2 cut(s)	279, 1169
SmlI	CTYRAG	4 cut(s)	1268, 1310, 1330, 2471
SmoI	CTYRAG	4 cut(s)	1268, 1310, 1330, 2471
SphI	GCATGC	1 cut(s)	2042
Sse9I	AATT	8 cut(s)	20, 586, 595, 739, 1030, 1222, 1626, 2221
SseBI	AGGCCT	1 cut(s)	572
SspMI	CTAG	4 cut(s)	1382, 1503, 1586, 2382
SstI	GAGCTC	2 cut(s)	974, 1358
StuI	AGGCCT	1 cut(s)	572
StyD4I	CCNGG	9 cut(s)	433, 485, 616, 1022, 1251, 1278, 1845, 1880, 2419
StyI	CCWWGG	4 cut(s)	1596, 1720, 1815, 2166
TaaI	ACNGT	3 cut(s)	40, 2051, 2065
TaiI	ACGT	4 cut(s)	283, 551, 1661, 2109
TaqII	GACCGA	2 cut(s)	72, 1048
TasI	AATT	8 cut(s)	20, 586, 595, 739, 1030, 1222, 1626, 2221
TatI	WGTACW	7 cut(s)	735, 1136, 1560, 1731, 1780, 1911, 2483
TfiI	GAWTC	4 cut(s)	677, 1001, 1865, 2255
Tru1I	TTAA	3 cut(s)	68, 1904, 1971
Tru9I	TTAA	3 cut(s)	68, 1904, 1971
TscAI	CASTG	6 cut(s)	43, 935, 1156, 2070, 2376, 2442
TseFI	GTSAC	5 cut(s)	1633, 1820, 1856, 2024, 2377
TseI	GCWGC	5 cut(s)	6, 933, 1306, 1615, 2159
Tsp45I	GTSAC	5 cut(s)	1633, 1820, 1856, 2024, 2377
TspDTI	ATGAA	6 cut(s)	86, 1181, 1776, 1928, 2080, 2156
TspGWI	ACGGA	2 cut(s)	568, 597
TspRI	CASTG	6 cut(s)	43, 935, 1156, 2070, 2376, 2442
Tth111I	GACNNNGTC	5 cut(s)	80, 889, 1024, 1363, 2051
VpaK11BI	GGWCC	5 cut(s)	55, 925, 1020, 1026, 1430
XagI	CCTNNNNNAGG	1 cut(s)	2329
XapI	RAATTY	2 cut(s)	595, 1222
XceI	RCATGY	3 cut(s)	757, 1738, 2042
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1937
XhoI	CTCGAG	2 cut(s)	1268, 2471
XspI	CTAG	4 cut(s)	1382, 1503, 1586, 2382
ZrmI	AGTACT	1 cut(s)	1138

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.