RLG00000029987

breast cancer carboxy-terminal domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0012645
Physical Location & Seq
Forward (+)
52720657 .. 52730627
9971 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000029987

Sequence Viewer

Length: 3264 bp
ATGGCTCATCATCCTATCAACACCTTAGGGTTTCGTCCTCCTCAGTTCTCCGAGGACTTAGCTTGGCTTCCTGGTTGGCTTCAGCAGCATCAGATAGAACAGTTTGATGAGTGCATCGAGAAGCTTAAGGGTACCAACTTAGAGCTAGAATGCAAGGATTTGAAAGTTTCTCAAGGAAAAAACAGTAAAGGTAACTATGCTGATACGTTGTCAAGGGAAGAAGATAGAAACAAAAGCTATCATTTATTCTTATCTGGGGAAGACAATACGCCTGCTGGTTGTTCTTCATCTCCTGGAAATGTTCTTCATTTCCATCTTCGTCTTTCATCAACTGGGTTTTCACAGTGTAGCCCAACTCAAACTCCGGATGCTTCCCAAAATGATCTTAAATCCAATAGAGTTGCATCTGTGGAACTAAATGACATCTCAGTAGGTTCTAAGGACAAGACTTGTTCTGAAATGGGGCTTTATCTTGGTGGGAGAAATTTGCTACCTCTGAATTCCGTTCAGAAGTCCATGGAGGATGTTGGTCCACAATGTCCTTCCAATTATAAGATATCAGCAACGCATAAAAGAGAAAAGTATAATGTCAAGTACCCCAAAGCAACTGATATGACTGCTGCAGCTGAACTCTCAATTGCAGCATCCGAGGCATTGGTTATACATGAAATAGAGAGGCATGGGTTTGTTGCAGATGCATTGCCAACTGAAGTGGTACTTGAAGCTGCTCTTCGGGTAAAGAAAGCTCGGTTGGAGTGGTCAGTAGATGCCTCAGACAGCCTAGCTGACGAAACAGACGAGAGTGATTCACTTTCAGACTTGGATGATTTAACGATGGCCGATGCATATGAAGATGTAGGTTTGTCTCATAGTATTCCTTTTGATGACTGCACTTGTGGTTCAGCTATTTCTCTGGTGAAAGAAACTCCTCTCTCGGAACAGCAGCATGAGTTTGTAAACCTATGTGATCCTGTAGAGCTGGGGGCTCCACAAGTTGAGTTTGATGATATGTCTGCACAAAGGCAGCTATCGGAGAACATGGTTGTGGATATATCAAAGGACAATGTGCCTGCAACATCTTTCAATCATGAGAGAGAAGAGTTCTCTGATAACCTTGTTCCGGGTTTAAACACCTGCAATGTCTCCAGATGCAACCATTTAGCTCTGAAGAACTCAGATGTTTTGGCTAGGAAACAGACAATTGGCCCAAGTATGGTGGATGTAACTTCTTATCAGACTAAAAAAGTAGATATTCACACCCATGCTTGGAATTCCGGAAATGCCAGAGATAATAGGGTATCTTACTTAGTATCGGACAGGTTCAGGAGCCGATGGCTAGGTGGTTGGACAGGCCAAGAAGTATCTGCTGTTGGACACATGGGACAGAATGCTAAAAGTATTGTGAAATGTTTTGCTGTCGAGACAAGCTTTCTCTCAGAATCGGCAGATATTGCTCCAGATATGAACTCTTTCGTGCAAGTTCATGAAACTGAGTCACATAGAATGTCACAGTCAAGCATCCACTTTGGTCTTTTGCCTGGTGAAGCTAATAAGGGGATATTACTTTCTCAAGATGTGGTGAGATCGTCTAGCTTGTCTTTAGTTGATCCTCTTTGTTCAGTTGTTCCTTGCAGTATTCCTTCAGAGAACGAAGTTCCAACATTAGCACAGACTCAGAGGGATAAGGAAAGTCATACTGAAAAATGCTTTAGACCCACCACAGAACTTGGGATGGGGAATTTACACAAATCCTCAAATCTAATTATTGAGGATGGTCAAGCTACTCCCGCAATTAATGGTGAAGATTCTCCTGTCACAGTTCGAAGGCAGTTTATTTCACTGAAGACCTATAGTACACTTCTCCCAAACCCTGTTTCCAATGGGGGAAGCCTTTATCAGTCAATTAAACTAGATTGTGATCAGAGGCTGATCACCTTAGATCAGAATGTGGGTTGCATTAGATCTTCTGATAGAAGTCGTAAAGAGTCCCTTCCTCTCAAGCCCATATCCAGGCATTTATCTTCAGGAGATAATAAGGAAAACGATAAAATGATCTCAAATGGGACTCCGGTTGTAAAAAAGAAATATCAGAAGAGAAAATATAATGAGACTATAGGAGATGGGAATCAGTTACCTGTTCAGGCATCAAAGAAGAGGAGGCAGTCTGTTTCTTCTAACCACAGGGCACACTGCCATCTTCGGGCTTCTAAATCATTTGTCAACAATTCCACTGGGGAGAAACTTCCCAAACTAGCTTTGGTGGCAGAAAATGTTGTTGAGCTTCAACAAAACAAGGAACCCCAGAGTATACCATCTGAACACAAGAGTCTCCATTGCAGAGATGTTCCAGCAAAAAAAAGAGTTCACTTCTCTGAAGCAGAGATTCCAGTTCAGCAGAACAAGAACCCTAAAGTACTAGATTTTTTCACCAAGAATTGGTTAACTGATAGAGCAAGTAAAAAGCGCAAGTATTCAAACTATTCCAAGTTTGAAAATCACGAGAAATGTTGGGGTACCAATTCTCATGTCAAGGCTACGAAAAGATTGCTATTTCAAGGTATACAATTCCTGCTCACAGGATTTTCTAGGCAGAAAGAAAAGGATCTTGAAGGAAAAATATGGAAACATGGTGGAATTGTTCTGTTTGATATTCCTTCTCCAAATTCAAGGGCAAACAGAAGCTTAAGATCTAATGGCTACCAGCTTCCTATTATTCTATGTTCGAAAAAGCTACAAACAACAAAGTTTTTGTACGGGTGTGCTGTGAATGCCTTCATATTAAAAGATGATTGGCTTACTAATTCAATTTCAGCAGATTATATTGTACCACCTGAGCAATACATTATTCTACGGAATGAAGCTGCTGCAGAGCATATTAGCATTGGGAAGCCATTTTGTCACAAGCGTGATTATGTCTTTGATAAAGTAGGAATTATGCTTCATGGGAAGCAAAGTTTCTGCTGCAGATTGGCGAAAATAATTAAGCATGGAGGTGGGCAGGTATTTAAAACCCTCCAGAGGTTAATCCTCGATTTGGAGAGAGACAAGATTTCTTGGGGAGCAATTGTTTCTGAGGATGAAAAGACATCACGCCACTTGAGGCACTGTGCCGCCGAACAAAAGATACCAATAATGCCAGCTAGCTGGATCATAAAAAGCTTGCATTTAGGAAAGCGTCTTCCATTTTCAGATACAGGCCCTTCCTCATCTCCAGTGCTTACAATTTCTGGGCCCAGTTTCCATAGGATGAGTGAAGATGTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BRCT_2 RTT107_BRCT_5

Protein Analysis

1088

Amino Acids

121.11

Weight (kDa)

7.56

Isoelectric Point (pI)

46.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BRCT_3 PF18428 972 - 1063 6.9e-08 BRCA1 C Terminus (BRCT) domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 552
AarI CACCTGC 1 cut(s) 1142
Acc36I ACCTGC 2 cut(s) 1142, 2989
Acc65I GGTACC 2 cut(s) 131, 2513
AccB1I GGYRCC 2 cut(s) 131, 2513
AccB7I CCANNNNNTGG 1 cut(s) 2436
AccI GTMKAC 2 cut(s) 2308, 2560
AccIII TCCGGA 2 cut(s) 364, 1274
AciI CCGC 2 cut(s) 1788, 3111
AclWI GGATC 4 cut(s) 962, 1601, 2610, 3155
AcoI YGGCCR 1 cut(s) 837
AcsI RAATTY 5 cut(s) 484, 499, 1270, 1738, 2662
AcuI CTGAAG 7 cut(s) 65, 729, 1187, 1626, 1862, 2007, 2394
AfaI GTAC 8 cut(s) 133, 596, 717, 1855, 2415, 2515, 2753, 2826
AfiI CCNNNNNNNGG 8 cut(s) 1120, 1213, 1266, 2010, 2200, 2436, 3018, 3034
AflII CTTAAG 2 cut(s) 125, 2683
AjnI CCWGG 4 cut(s) 70, 292, 1537, 2009
AjuI GAANNNNNNNTTGG 4 cut(s) 734, 766, 1858, 1890
AleI CACNNNNGTG 1 cut(s) 2904
Alw26I GTCTC 6 cut(s) 870, 1147, 1415, 2102, 2333, 3036
AlwI GGATC 4 cut(s) 962, 1601, 2610, 3155
AlwNI CAGNNNCTG 1 cut(s) 1927
Aor13HI TCCGGA 2 cut(s) 364, 1274
AoxI GGCC 5 cut(s) 837, 1204, 1351, 3196, 3230
ApaI GGGCCC 1 cut(s) 3234
ApoI RAATTY 5 cut(s) 484, 499, 1270, 1738, 2662
AseI ATTAAT 1 cut(s) 1794
Asp700I GAANNNNTTC 2 cut(s) 1469, 2771
Asp718I GGTACC 2 cut(s) 131, 2513
AspLEI GCGC 1 cut(s) 2466
AspS9I GGNCC 5 cut(s) 530, 1205, 3197, 3230, 3231
AsuC2I CCSGG 1 cut(s) 1122
AsuHPI GGTGA 6 cut(s) 928, 1553, 1591, 1811, 1924, 2419
AsuII TTCGAA 2 cut(s) 1822, 2723
AsuNHI GCTAGC 1 cut(s) 3140
AvaII GGWCC 1 cut(s) 530
AxyI CCTNAGG 1 cut(s) 25
BaeGI GKGCMC 2 cut(s) 2188, 3234
BanI GGYRCC 2 cut(s) 131, 2513
BanII GRGCYC 2 cut(s) 988, 3234
BauI CACGAG 1 cut(s) 2498
BbsI GAAGAC 3 cut(s) 267, 1850, 3170
BccI CCATC 8 cut(s) 321, 829, 1326, 1726, 1766, 2114, 2202, 2320
BcgI CGANNNNNNTGC 2 cut(s) 2527, 2561
BciT130I CCWGG 4 cut(s) 72, 294, 1539, 2011
BclI TGATCA 2 cut(s) 1918, 1929
BcnI CCSGG 1 cut(s) 1122
BcoDI GTCTC 6 cut(s) 870, 1147, 1415, 2102, 2333, 3036
BfmI CTRYAG 6 cut(s) 621, 972, 1849, 2112, 2865, 2962
BfrI CTTAAG 2 cut(s) 125, 2683
BfuAI ACCTGC 2 cut(s) 1142, 2989
BglII AGATCT 2 cut(s) 1961, 2687
BmcAI AGTACT 1 cut(s) 2415
Bme1390I CCNGG 5 cut(s) 72, 294, 1122, 1539, 2011
Bme18I GGWCC 1 cut(s) 530
BmgT120I GGNCC 5 cut(s) 530, 1205, 3197, 3230, 3231
BmiI GGNNCC 6 cut(s) 133, 987, 1328, 2298, 2515, 3232
BmrFI CCNGG 5 cut(s) 72, 294, 1122, 1539, 2011
BmrI ACTGGG 3 cut(s) 342, 2241, 3228
BmtI GCTAGC 1 cut(s) 3144
BmuI ACTGGG 3 cut(s) 342, 2241, 3228
BpiI GAAGAC 3 cut(s) 267, 1850, 3170
BpmI CTGGAG 4 cut(s) 1129, 1440, 2999, 3195
Bpu10I CCTNAGC 1 cut(s) 2832
Bpu14I TTCGAA 2 cut(s) 1822, 2723
BpuEI CTTGAG 4 cut(s) 156, 1554, 1982, 3118
BpuMI CCSGG 1 cut(s) 1122
BsaBI GATNNNNATC 2 cut(s) 1917, 2124
BsaJI CCNNGG 3 cut(s) 51, 516, 648
BsaWI WCCGGW 3 cut(s) 364, 1274, 2068
BsaXI ACNNNNNCTCC 4 cut(s) 346, 376, 3051, 3081
Bsc4I CCNNNNNNNGG 8 cut(s) 1120, 1213, 1266, 2010, 2200, 2436, 3018, 3034
Bse1I ACTGG 5 cut(s) 337, 2236, 2387, 3212, 3234
Bse21I CCTNAGG 1 cut(s) 25
Bse3DI GCAATG 3 cut(s) 698, 1144, 2332
Bse8I GATNNNNATC 2 cut(s) 1917, 2124
BseAI TCCGGA 2 cut(s) 364, 1274
BseBI CCWGG 4 cut(s) 72, 294, 1539, 2011
BseDI CCNNGG 3 cut(s) 51, 516, 648
BseJI GATNNNNATC 2 cut(s) 1917, 2124
BseLI CCNNNNNNNGG 8 cut(s) 1120, 1213, 1266, 2010, 2200, 2436, 3018, 3034
BseMI GCAATG 3 cut(s) 698, 1144, 2332
BseMII CTCAG 9 cut(s) 56, 441, 786, 1188, 1449, 1482, 1688, 2823, 3063
BseNI ACTGG 5 cut(s) 337, 2236, 2387, 3212, 3234
BseRI GAGGAG 3 cut(s) 30, 918, 2170
BseSI GKGCMC 2 cut(s) 2188, 3234
BseYI CCCAGC 1 cut(s) 979
BsgI GTGCAG 2 cut(s) 874, 999
BshFI GGCC 5 cut(s) 839, 1206, 1353, 3198, 3232
BshNI GGYRCC 2 cut(s) 131, 2513
BsiSI CCGG 4 cut(s) 365, 1121, 1275, 2069
BslFI GGGAC 3 cut(s) 1395, 1972, 2077
BslI CCNNNNNNNGG 8 cut(s) 1120, 1213, 1266, 2010, 2200, 2436, 3018, 3034
BsmAI GTCTC 6 cut(s) 870, 1147, 1415, 2102, 2333, 3036
BsmFI GGGAC 3 cut(s) 1395, 1972, 2077
BsmI GAATGC 3 cut(s) 155, 1393, 2773
BsnI GGCC 5 cut(s) 839, 1206, 1353, 3198, 3232
Bsp119I TTCGAA 2 cut(s) 1822, 2723
Bsp120I GGGCCC 1 cut(s) 3230
Bsp1286I GDGCHC 3 cut(s) 988, 2188, 3234
Bsp13I TCCGGA 2 cut(s) 364, 1274
Bsp19I CCATGG 1 cut(s) 516
BspACI CCGC 2 cut(s) 1788, 3111
BspANI GGCC 5 cut(s) 839, 1206, 1353, 3198, 3232
BspCNI CTCAG 9 cut(s) 55, 440, 785, 1187, 1448, 1483, 1687, 2824, 3064
BspEI TCCGGA 2 cut(s) 364, 1274
BspHI TCATGA 2 cut(s) 1087, 1483
BspLI GGNNCC 6 cut(s) 133, 987, 1328, 2298, 2515, 3232
BspMAI CTGCAG 3 cut(s) 625, 2869, 2966
BspMI ACCTGC 2 cut(s) 1142, 2989
BspOI GCTAGC 1 cut(s) 3144
BspPI GGATC 4 cut(s) 962, 1601, 2610, 3155
BspQI GCTCTTC 1 cut(s) 735
BspT104I TTCGAA 2 cut(s) 1822, 2723
BspT107I GGYRCC 2 cut(s) 131, 2513
BspTI CTTAAG 2 cut(s) 125, 2683
BsrDI GCAATG 3 cut(s) 698, 1144, 2332
BsrI ACTGG 5 cut(s) 337, 2236, 2387, 3212, 3234
BssECI CCNNGG 3 cut(s) 51, 516, 648
BssNAI GTATAC 2 cut(s) 2309, 2561
BssSI CACGAG 1 cut(s) 2498
BssT1I CCWWGG 1 cut(s) 516
Bst1107I GTATAC 2 cut(s) 2309, 2561
Bst2BI CACGAG 1 cut(s) 2498
Bst2UI CCWGG 4 cut(s) 72, 294, 1539, 2011
Bst4CI ACNGT 6 cut(s) 102, 185, 345, 1512, 1819, 3107
Bst6I CTCTTC 4 cut(s) 735, 1092, 2087, 2147
BstAFI CTTAAG 2 cut(s) 125, 2683
BstAPI GCANNNNNTGC 1 cut(s) 1451
BstBI TTCGAA 2 cut(s) 1822, 2723
BstC8I GCNNGC 5 cut(s) 273, 1071, 3138, 3142, 3161
BstDSI CCRYGG 1 cut(s) 516
BstHHI GCGC 1 cut(s) 2466
BstMAI GTCTC 6 cut(s) 870, 1147, 1415, 2102, 2333, 3036
BstMWI GCNNNNNNNGC 6 cut(s) 85, 650, 1451, 1787, 2261, 2768
BstNI CCWGG 4 cut(s) 72, 294, 1539, 2011
BstSCI CCNGG 5 cut(s) 70, 292, 1120, 1537, 2009
BstSFI CTRYAG 6 cut(s) 621, 972, 1849, 2112, 2865, 2962
BstSLI GKGCMC 2 cut(s) 2188, 3234
BstV2I GAAGAC 3 cut(s) 267, 1850, 3170
BstX2I RGATCY 3 cut(s) 1961, 2602, 2687
BstXI CCANNNNNNTGG 1 cut(s) 3144
BstYI RGATCY 3 cut(s) 1961, 2602, 2687
BstZ17I GTATAC 2 cut(s) 2309, 2561
Bsu36I CCTNAGG 1 cut(s) 25
BsuRI GGCC 5 cut(s) 839, 1206, 1353, 3198, 3232
BtgI CCRYGG 1 cut(s) 516
BtsI GCAGTG 1 cut(s) 2188
BtsIMutI CAGTG 6 cut(s) 350, 1838, 2188, 2229, 3103, 3219
BveI ACCTGC 2 cut(s) 1142, 2989
Cac8I GCNNGC 5 cut(s) 273, 1071, 3138, 3142, 3161
CaiI CAGNNNCTG 1 cut(s) 1927
CciI TCATGA 2 cut(s) 1087, 1483
CfoI GCGC 1 cut(s) 2466
Cfr13I GGNCC 5 cut(s) 530, 1205, 3197, 3230, 3231
CseI GACGC 1 cut(s) 3164
Csp6I GTAC 8 cut(s) 132, 595, 716, 1854, 2414, 2514, 2752, 2825
CspCI CAANNNNNGTGG 6 cut(s) 693, 728, 1197, 1232, 1708, 1743
CviQI GTAC 8 cut(s) 132, 595, 716, 1854, 2414, 2514, 2752, 2825
DraI TTTAAA 2 cut(s) 1128, 3007
EaeI YGGCCR 1 cut(s) 837
Eam1104I CTCTTC 4 cut(s) 735, 1092, 2087, 2147
EarI CTCTTC 4 cut(s) 735, 1092, 2087, 2147
Eco130I CCWWGG 1 cut(s) 516
Eco24I GRGCYC 2 cut(s) 988, 3234
Eco32I GATATC 1 cut(s) 558
Eco47I GGWCC 1 cut(s) 530
Eco57I CTGAAG 7 cut(s) 65, 729, 1187, 1626, 1862, 2007, 2394
Eco81I CCTNAGG 1 cut(s) 25
EcoO109I RGGNCCY 1 cut(s) 3197
EcoRI GAATTC 2 cut(s) 499, 1270
EcoRII CCWGG 4 cut(s) 70, 292, 1537, 2009
EcoRV GATATC 1 cut(s) 558
EcoT14I CCWWGG 1 cut(s) 516
EcoT22I ATGCAT 2 cut(s) 700, 847
EcoT38I GRGCYC 2 cut(s) 988, 3234
ErhI CCWWGG 1 cut(s) 516
FalI AAGNNNNNCTT 6 cut(s) 702, 734, 714, 746, 1974, 2006
FaqI GGGAC 3 cut(s) 1395, 1972, 2077
FauI CCCGC 1 cut(s) 1795
FauNDI CATATG 1 cut(s) 847
FbaI TGATCA 2 cut(s) 1918, 1929
FblI GTMKAC 2 cut(s) 2308, 2560
FriOI GRGCYC 2 cut(s) 988, 3234
GlaI GCGC 1 cut(s) 2465
GsaI CCCAGC 1 cut(s) 983
GsuI CTGGAG 4 cut(s) 1129, 1440, 2999, 3195
HaeIII GGCC 5 cut(s) 839, 1206, 1353, 3198, 3232
HapII CCGG 4 cut(s) 365, 1121, 1275, 2069
HgaI GACGC 1 cut(s) 3164
HhaI GCGC 1 cut(s) 2466
Hin6I GCGC 1 cut(s) 2464
HinP1I GCGC 1 cut(s) 2464
HincII GTYRAC 2 cut(s) 2221, 2442
HindII GTYRAC 2 cut(s) 2221, 2442
HindIII AAGCTT 4 cut(s) 122, 1426, 2680, 3157
HpaI GTTAAC 1 cut(s) 2442
HpaII CCGG 4 cut(s) 365, 1121, 1275, 2069
HphI GGTGA 6 cut(s) 928, 1553, 1591, 1811, 1924, 2419
Hpy166II GTNNAC 8 cut(s) 533, 958, 1856, 2221, 2309, 2365, 2442, 2561
Hpy8I GTNNAC 8 cut(s) 533, 958, 1856, 2221, 2309, 2365, 2442, 2561
HpyAV CCTTC 8 cut(s) 552, 1650, 1818, 2000, 2603, 2664, 2782, 3210
HpyCH4III ACNGT 6 cut(s) 102, 185, 345, 1512, 1819, 3107
HpyCH4IV ACGT 1 cut(s) 206
HpyF10VI GCNNNNNNNGC 6 cut(s) 85, 650, 1451, 1787, 2261, 2768
HpySE526I ACGT 1 cut(s) 206
HspAI GCGC 1 cut(s) 2464
Kpn2I TCCGGA 2 cut(s) 364, 1274
KpnI GGTACC 2 cut(s) 135, 2517
Ksp22I TGATCA 2 cut(s) 1918, 1929
KspAI GTTAAC 1 cut(s) 2442
LguI GCTCTTC 1 cut(s) 735
LmnI GCTCC 4 cut(s) 991, 1326, 1459, 3059
MaeII ACGT 1 cut(s) 206
MaeIII GTNAC 7 cut(s) 191, 1222, 1494, 1506, 1813, 2130, 2897
MfeI CAATTG 3 cut(s) 636, 1200, 3063
MflI RGATCY 3 cut(s) 1961, 2602, 2687
MhlI GDGCHC 3 cut(s) 988, 2188, 3234
MlyI GAGTC 5 cut(s) 1502, 1666, 1994, 2059, 2335
MmeI TCCRAC 4 cut(s) 732, 1325, 1351, 1682
Mph1103I ATGCAT 2 cut(s) 700, 847
MroI TCCGGA 2 cut(s) 364, 1274
MroXI GAANNNNTTC 2 cut(s) 1469, 2771
MslI CAYNNNNRTG 4 cut(s) 1043, 1260, 2904, 2991
MspA1I CMGCKG 1 cut(s) 626
MspCI CTTAAG 2 cut(s) 125, 2683
MspI CCGG 4 cut(s) 365, 1121, 1275, 2069
MspR9I CCNGG 5 cut(s) 72, 294, 1122, 1539, 2011
MssI GTTTAAAC 1 cut(s) 1128
MunI CAATTG 3 cut(s) 636, 1200, 3063
Mva1269I GAATGC 3 cut(s) 155, 1393, 2773
MvaI CCWGG 4 cut(s) 72, 294, 1539, 2011
MwoI GCNNNNNNNGC 6 cut(s) 85, 650, 1451, 1787, 2261, 2768
NciI CCSGG 1 cut(s) 1122
NcoI CCATGG 1 cut(s) 516
NdeI CATATG 1 cut(s) 847
NheI GCTAGC 1 cut(s) 3140
NlaIV GGNNCC 6 cut(s) 133, 987, 1328, 2298, 2515, 3232
NmuCI GTSAC 4 cut(s) 1494, 1506, 1813, 2897
NsiI ATGCAT 2 cut(s) 700, 847
NspV TTCGAA 2 cut(s) 1822, 2723
OliI CACNNNNGTG 1 cut(s) 2904
PagI TCATGA 2 cut(s) 1087, 1483
PaqCI CACCTGC 1 cut(s) 1142
PciSI GCTCTTC 1 cut(s) 735
PcsI WCGNNNNNNNCGW 1 cut(s) 795
PctI GAATGC 3 cut(s) 155, 1393, 2773
PdmI GAANNNNTTC 2 cut(s) 1469, 2771
PfeI GAWTC 5 cut(s) 806, 1439, 1805, 2125, 2383
PflMI CCANNNNNTGG 1 cut(s) 2436
PfoI TCCNGGA 1 cut(s) 292
PleI GAGTC 5 cut(s) 1501, 1666, 1993, 2059, 2334
PmeI GTTTAAAC 1 cut(s) 1128
PpsI GAGTC 5 cut(s) 1501, 1666, 1993, 2059, 2334
PshBI ATTAAT 1 cut(s) 1794
PsiI TTATAA 1 cut(s) 552
Psp6I CCWGG 4 cut(s) 70, 292, 1537, 2009
PspFI CCCAGC 1 cut(s) 979
PspGI CCWGG 4 cut(s) 70, 292, 1537, 2009
PspN4I GGNNCC 6 cut(s) 133, 987, 1328, 2298, 2515, 3232
PspOMI GGGCCC 1 cut(s) 3230
PspPI GGNCC 5 cut(s) 530, 1205, 3197, 3230, 3231
PsrI GAACNNNNNNTAC 2 cut(s) 3108, 3140
PstI CTGCAG 3 cut(s) 625, 2869, 2966
PstNI CAGNNNCTG 1 cut(s) 1927
PsuI RGATCY 3 cut(s) 1961, 2602, 2687
PvuII CAGCTG 1 cut(s) 626
RsaI GTAC 8 cut(s) 133, 596, 717, 1855, 2415, 2515, 2753, 2826
RsaNI GTAC 8 cut(s) 132, 595, 716, 1854, 2414, 2514, 2752, 2825
RseI CAYNNNNRTG 4 cut(s) 1043, 1260, 2904, 2991
SapI GCTCTTC 1 cut(s) 735
Sau96I GGNCC 5 cut(s) 530, 1205, 3197, 3230, 3231
ScaI AGTACT 1 cut(s) 2415
SchI GAGTC 5 cut(s) 1502, 1666, 1994, 2059, 2335
ScrFI CCNGG 5 cut(s) 72, 294, 1122, 1539, 2011
SduI GDGCHC 3 cut(s) 988, 2188, 3234
SfcI CTRYAG 6 cut(s) 621, 972, 1849, 2112, 2865, 2962
SfuI TTCGAA 2 cut(s) 1822, 2723
SinI GGWCC 1 cut(s) 530
SmiMI CAYNNNNRTG 4 cut(s) 1043, 1260, 2904, 2991
SmlI CTYRAG 6 cut(s) 125, 171, 1569, 1997, 2683, 3097
SmoI CTYRAG 6 cut(s) 125, 171, 1569, 1997, 2683, 3097
SsiI CCGC 2 cut(s) 1788, 3111
StyD4I CCNGG 5 cut(s) 70, 292, 1120, 1537, 2009
StyI CCWWGG 1 cut(s) 516
TaaI ACNGT 6 cut(s) 102, 185, 345, 1512, 1819, 3107
TaiI ACGT 1 cut(s) 209
TaqI TCGA 5 cut(s) 117, 1419, 1822, 2723, 3030
TatI WGTACW 2 cut(s) 1853, 2413
TauI GCSGC 1 cut(s) 3113
TfiI GAWTC 5 cut(s) 806, 1439, 1805, 2125, 2383
TscAI CASTG 6 cut(s) 350, 1845, 2195, 2236, 3110, 3219
TseFI GTSAC 4 cut(s) 1494, 1506, 1813, 2897
Tsp45I GTSAC 4 cut(s) 1494, 1506, 1813, 2897
TspGWI ACGGA 2 cut(s) 493, 2866
TspRI CASTG 6 cut(s) 350, 1845, 2195, 2236, 3110, 3219
Van91I CCANNNNNTGG 1 cut(s) 2436
Vha464I CTTAAG 2 cut(s) 125, 2683
VpaK11BI GGWCC 1 cut(s) 530
VspI ATTAAT 1 cut(s) 1794
XapI RAATTY 5 cut(s) 484, 499, 1270, 1738, 2662
XcmI CCANNNNNNNNNTGG 1 cut(s) 2254
XmiI GTMKAC 2 cut(s) 2308, 2560
XmnI GAANNNNTTC 2 cut(s) 1469, 2771
ZrmI AGTACT 1 cut(s) 2415
Zsp2I ATGCAT 2 cut(s) 700, 847
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.