Rroxscaffold_4G00322590

breast cancer carboxy-terminal domain

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Forward (+)
52985044 .. 52998562
13519 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00322590.1

Sequence Viewer

Length: 3021 bp
ATGGCTCATCATCCTATCAACACCTTAGGGTTTCGTCCTCCTCAGTTCTCCGAGGACTTAGCTTGGCTTCCTGGTTGGCTTCAGCAGCATCAGATAGAACAGTTTGATGAGTGCATCGAGAAACTTAAGGGTACCAACTTAGAGCTGGAATGCAAGGATTTGAAAGTTTCTCAAGGAAAAAACAGTAAAGGTAACGAGGCTGATACATTGTCAAGGGAAGAAGATAGGAACAAAAGCTATCATTTATTCTTATCTGGGGAAGACAATACGCCTGCTGGTTTTTCTTCATCTCCTGGAAATGTACTTCATTTCCATCTTCGTCTTTCATCAACTGGGTTTTCACAGTGTAGCCAAACTCCGGATGCTTCCCAAAATGATCTTAAATCCAATAGAGTTGCATCTGTGGAACTAAATGACATCTCAGTAGGTTCTAAGGACAAGACTTGTTCTGAAATGGGGCTTAATCTTGGTGGGAGAAATTTGCTACCTCTGAATTCCGTTCAGAAGTCCATGGAGGATGTTGGTCCACAATGTCCTTCCAATTATAAGATATCAGCAACGCATAAAAGAGAAAACAGCATCCGAGGGCATTGGGTTATACATGAAATAGTGAGGCGTGGGTTTGTTGCAGATGCATTGCCAACTGAAGTGGTGGTACTTGAAGCTGCTCTTGCTCTTCGGGTGAAGAAAGCTCGGTTGTTGGAGTGGTCAGTCGATGCCTTAGACAGCCTAGCTGACGAAACAGACGAGAGTGATTCACTTTCAGACTTGGATGATTTAACGATGGCTGATGCATATGAAGATGTAGGATTGTCTCATAGTATTCCTTTTGATGACTGCACTTGTGGTTCAGCTATTTCTCTGGTGAAAGAAACTCCTCTCTCGGAACAGCAGCATGAGTTTGTAAACCTATGTGATCCTGTAGAGCTGGGGGCTCCACAAGTCGAGTTTGATGATATGTCTGCACAAAGGCAGCTATCGGAGAACATGGTTGTGAATATATCAAAGGACAATGTGCCTGCAACATCTTTCAATCATGAGAGAGAAGAGTTCTCTGATAACCTTGTTCCGGGTTTAAACACCTGGAATGTCTCCAGATGCAACCATTTAGCTCTGAAGAACTCAGATGTTTTGGCTAGGAAACAGACAATTGGCCCAAGTATGGTGGATGTAACTTCTTATCAGACTAAAAAAGTAGATATTCACACCCATGCTTGGAATTCCGGAAATGCCAGAGATAATAGGGTATCTTACTTGGTATCGGACAGGTTCAGGAGCCGATGGCTAGGTGGTTGGACAGGCCAAGAAGTATCTGCTGTTGGACACATGGGACAGAATGCTAAAAGTATTGTGAAATGTTTTGCTGGCGAGACAAGCTTTCTCTCAGAATCGGCAGATATTGCTCCAGATATGAACTCTTTCGTGCAAGTTCATGAAACTGAGTCACACAGAATGTCACAGTCAAGCATCCACTTTGGTCTTTTGCCTGGTGAAGCTAATAAGGGGATATTACTTTCTCAAGATGTGGTGAGATCGTCTAGCTTGTCTTTAGTTGATCCTCTTTGTTCAGTTGTTCCTTGCAGTATTCCTTCAGAGAACGAAGTTCCGACATTAGCACAGACTCAGAGGGATAAGGAAAGTCATACTGAAAAATGCTTTAGACCCACCACAGAACTTGGGATGGGGAATTTACACAAATCCTCAAATCTAATTATTGAGGATGGTCAAGCTACTCCCGCAATTAGTGGTGAAGATTCTCCTGTCACAGTTCGAAGGCAGTTTATTTCACTGAAGACCTATAGTACACTTCTCCCAAACCCTGTTTCCAATGGGGGCAGCGTTTATCAGTCAATTAAACTAGATTGTGATCAGAGGCTGATCACCTTAGATCAGAATGTGCGTTGCGTTAGATCTTCTGATAGAAGTCGTAAAGAGTCCCTTCCTCTCAAGCCCATATCCAGGCATTTATCTTCAGGAGATAATAAGGAAAACGATAAAATGATCTCAAATGGGACTCCGGTTGTAAAAAAAAAATATCAGAAGAGAAAATATAATGAGACTATAGGAGATGGGAATCAGTTACCTGTTCAGGCATCAAAAAAGAGGAGGCAGTCTGTTTCTTCTAACCACAGGGCACACTGCCATCTTCGGGCTTCTAAATCATTTGTCAACAATTCCACTGGGGAGAAACTTCCCAAACTGGCTTTGGTGGCAGAAAATGTTGTTGAGCTTCAACAAAACAAGGAACCCCAGAGGTTAACTGATAGAGCAAGTAAAAAACGCAAGTATTCAAACTATTCCAAGTTTGAAAATCACGAGAAATGTTGGCGTACCAATTCTCATGTTAAGGCTACGAAAAGATTGCTATTTCAAGGTATACAATTCCTGCTCACAGGATTTTCTCGGCAGAAAGAAAAGGATCTTGAAGGAAAAGTATGGAAACATGGTGGAATTGTTCTGTTTGATATTCCTTCTCCAAATTCAAGGGCAAACAGAAACTTAAGATCTAATGGCTACCAGCTTCCTATTATTCTATGTTCGAAAAAGCTACAAACAACAAAGTTTTTGTACGGGTGTGCTGTGAATGCCTTCATATTAAAAGATGATTGGCTTACTAATTCAATTTCAGCAGATTATATTGTACCACCTGAGCAATACATTATTCTACGGAATGAAGCTGCTGCAGAGCATATTAGCATTGGGAAGCCATTTTGTCACAAGCGTGATTATGTCTTTGATAAACATGGAGGTGGGCAGGTCTTTAAAACCCTCCAGAGGTTAATCCTCAATTTGGAGAAAGAGAAGATTTCTTGGGGAGCAATTGTTTCTGAGGATGAAAAGACATCACGCCACTTGAGGCACTGTGCCGCCGAACAAAAGATACCAATAATGCCAGCTAGCTGGATCATAAAAAGCTTGCATTTAGGAAAGCGTCTTCCATTTTCAGATACAGGCCCTTCCTCATCTCCAGTGCTTACAATTTCTGGGCCCAGTTTCCATAGGATGAGTGAAGATGTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1006

Amino Acids

112.24

Weight (kDa)

7.59

Isoelectric Point (pI)

46.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 546
Acc36I ACCTGC 1 cut(s) 2746
Acc65I GGTACC 1 cut(s) 131
AccB1I GGYRCC 1 cut(s) 131
AccI GTMKAC 1 cut(s) 2377
AccIII TCCGGA 2 cut(s) 358, 1223
AciI CCGC 2 cut(s) 1737, 2868
AclWI GGATC 4 cut(s) 911, 1550, 2427, 2912
AcsI RAATTY 5 cut(s) 478, 493, 1219, 1687, 2479
AcuI CTGAAG 6 cut(s) 65, 666, 1136, 1575, 1811, 1956
AfaI GTAC 7 cut(s) 133, 303, 657, 1804, 2332, 2570, 2643
AfiI CCNNNNNNNGG 8 cut(s) 358, 1069, 1162, 1215, 1959, 2149, 2775, 2791
AflII CTTAAG 2 cut(s) 125, 2500
AjnI CCWGG 5 cut(s) 70, 292, 1082, 1486, 1958
AjuI GAANNNNNNNTTGG 2 cut(s) 1807, 1839
AleI CACNNNNGTG 1 cut(s) 2721
Alw26I GTCTC 4 cut(s) 819, 1096, 1364, 2051
AlwI GGATC 4 cut(s) 911, 1550, 2427, 2912
AlwNI CAGNNNCTG 1 cut(s) 1876
Aor13HI TCCGGA 2 cut(s) 358, 1223
AoxI GGCC 4 cut(s) 1153, 1300, 2953, 2987
ApaI GGGCCC 1 cut(s) 2991
ApeKI GCWGC 7 cut(s) 85, 665, 892, 973, 1836, 2678, 2681
ApoI RAATTY 5 cut(s) 478, 493, 1219, 1687, 2479
Asp700I GAANNNNTTC 2 cut(s) 1418, 2588
Asp718I GGTACC 1 cut(s) 131
AspS9I GGNCC 5 cut(s) 524, 1154, 2954, 2987, 2988
AsuC2I CCSGG 1 cut(s) 1071
AsuHPI GGTGA 6 cut(s) 694, 877, 1502, 1540, 1760, 1873
AsuII TTCGAA 2 cut(s) 1771, 2540
AsuNHI GCTAGC 1 cut(s) 2897
AvaII GGWCC 1 cut(s) 524
AxyI CCTNAGG 1 cut(s) 25
BaeGI GKGCMC 2 cut(s) 2137, 2991
BanI GGYRCC 1 cut(s) 131
BanII GRGCYC 2 cut(s) 937, 2991
BarI GAAGNNNNNNTAC 2 cut(s) 639, 671
BauI CACGAG 1 cut(s) 2315
BbsI GAAGAC 3 cut(s) 267, 1799, 2927
BbvI GCAGC 7 cut(s) 97, 652, 904, 985, 1848, 2665, 2668
BccI CCATC 7 cut(s) 321, 778, 1275, 1675, 1715, 2063, 2151
BcgI CGANNNNNNTGC 2 cut(s) 2344, 2378
BciT130I CCWGG 5 cut(s) 72, 294, 1084, 1488, 1960
BclI TGATCA 2 cut(s) 1867, 1878
BcnI CCSGG 1 cut(s) 1071
BcoDI GTCTC 4 cut(s) 819, 1096, 1364, 2051
BfaI CTAG 6 cut(s) 731, 1137, 1286, 1539, 1859, 2898
BfmI CTRYAG 4 cut(s) 921, 1798, 2061, 2682
BfrI CTTAAG 2 cut(s) 125, 2500
BfuAI ACCTGC 1 cut(s) 2746
BglII AGATCT 2 cut(s) 1910, 2504
BisI GCNGC 8 cut(s) 86, 666, 893, 974, 1837, 2679, 2682, 2868
BlsI GCNGC 8 cut(s) 87, 667, 894, 975, 1838, 2680, 2683, 2869
Bme1390I CCNGG 6 cut(s) 72, 294, 1071, 1084, 1488, 1960
Bme18I GGWCC 1 cut(s) 524
BmgT120I GGNCC 5 cut(s) 524, 1154, 2954, 2987, 2988
BmiI GGNNCC 5 cut(s) 133, 936, 1277, 2247, 2989
BmrFI CCNGG 6 cut(s) 72, 294, 1071, 1084, 1488, 1960
BmrI ACTGGG 3 cut(s) 342, 2190, 2985
BmtI GCTAGC 1 cut(s) 2901
BmuI ACTGGG 3 cut(s) 342, 2190, 2985
BpiI GAAGAC 3 cut(s) 267, 1799, 2927
BpmI CTGGAG 4 cut(s) 1078, 1389, 2756, 2952
Bpu10I CCTNAGC 1 cut(s) 2649
Bpu14I TTCGAA 2 cut(s) 1771, 2540
BpuEI CTTGAG 4 cut(s) 156, 1503, 1931, 2875
BpuMI CCSGG 1 cut(s) 1071
BsaBI GATNNNNATC 2 cut(s) 1866, 2073
BsaJI CCNNGG 3 cut(s) 51, 510, 583
BsaWI WCCGGW 3 cut(s) 358, 1223, 2017
BsaXI ACNNNNNCTCC 2 cut(s) 2808, 2838
Bsc4I CCNNNNNNNGG 8 cut(s) 358, 1069, 1162, 1215, 1959, 2149, 2775, 2791
Bse1I ACTGG 5 cut(s) 337, 2185, 2205, 2969, 2991
Bse21I CCTNAGG 1 cut(s) 25
Bse3DI GCAATG 1 cut(s) 635
Bse8I GATNNNNATC 2 cut(s) 1866, 2073
BseAI TCCGGA 2 cut(s) 358, 1223
BseBI CCWGG 5 cut(s) 72, 294, 1084, 1488, 1960
BseDI CCNNGG 3 cut(s) 51, 510, 583
BseJI GATNNNNATC 2 cut(s) 1866, 2073
BseLI CCNNNNNNNGG 8 cut(s) 358, 1069, 1162, 1215, 1959, 2149, 2775, 2791
BseMI GCAATG 1 cut(s) 635
BseMII CTCAG 8 cut(s) 56, 435, 1137, 1398, 1431, 1637, 2640, 2820
BseNI ACTGG 5 cut(s) 337, 2185, 2205, 2969, 2991
BseRI GAGGAG 3 cut(s) 30, 867, 2119
BseSI GKGCMC 2 cut(s) 2137, 2991
BseXI GCAGC 7 cut(s) 97, 652, 904, 985, 1848, 2665, 2668
BseYI CCCAGC 1 cut(s) 928
BsgI GTGCAG 2 cut(s) 823, 948
BshFI GGCC 4 cut(s) 1155, 1302, 2955, 2989
BshNI GGYRCC 1 cut(s) 131
BsiSI CCGG 4 cut(s) 359, 1070, 1224, 2018
BslFI GGGAC 3 cut(s) 1344, 1921, 2026
BslI CCNNNNNNNGG 8 cut(s) 358, 1069, 1162, 1215, 1959, 2149, 2775, 2791
BsmAI GTCTC 4 cut(s) 819, 1096, 1364, 2051
BsmFI GGGAC 3 cut(s) 1344, 1921, 2026
BsmI GAATGC 3 cut(s) 155, 1342, 2590
BsnI GGCC 4 cut(s) 1155, 1302, 2955, 2989
Bsp119I TTCGAA 2 cut(s) 1771, 2540
Bsp120I GGGCCC 1 cut(s) 2987
Bsp1286I GDGCHC 3 cut(s) 937, 2137, 2991
Bsp13I TCCGGA 2 cut(s) 358, 1223
Bsp19I CCATGG 1 cut(s) 510
BspACI CCGC 2 cut(s) 1737, 2868
BspANI GGCC 4 cut(s) 1155, 1302, 2955, 2989
BspCNI CTCAG 8 cut(s) 55, 434, 1136, 1397, 1432, 1636, 2641, 2821
BspEI TCCGGA 2 cut(s) 358, 1223
BspHI TCATGA 2 cut(s) 1036, 1432
BspLI GGNNCC 5 cut(s) 133, 936, 1277, 2247, 2989
BspMAI CTGCAG 1 cut(s) 2686
BspMI ACCTGC 1 cut(s) 2746
BspOI GCTAGC 1 cut(s) 2901
BspPI GGATC 4 cut(s) 911, 1550, 2427, 2912
BspQI GCTCTTC 1 cut(s) 681
BspT104I TTCGAA 2 cut(s) 1771, 2540
BspT107I GGYRCC 1 cut(s) 131
BspTI CTTAAG 2 cut(s) 125, 2500
BsrDI GCAATG 1 cut(s) 635
BsrI ACTGG 5 cut(s) 337, 2185, 2205, 2969, 2991
BssECI CCNNGG 3 cut(s) 51, 510, 583
BssNAI GTATAC 1 cut(s) 2378
BssSI CACGAG 1 cut(s) 2315
BssT1I CCWWGG 1 cut(s) 510
Bst1107I GTATAC 1 cut(s) 2378
Bst2BI CACGAG 1 cut(s) 2315
Bst2UI CCWGG 5 cut(s) 72, 294, 1084, 1488, 1960
Bst4CI ACNGT 6 cut(s) 102, 185, 345, 1461, 1768, 2864
Bst6I CTCTTC 3 cut(s) 681, 1041, 2036
BstAFI CTTAAG 2 cut(s) 125, 2500
BstAPI GCANNNNNTGC 1 cut(s) 1400
BstBI TTCGAA 2 cut(s) 1771, 2540
BstC8I GCNNGC 6 cut(s) 273, 1020, 1366, 2895, 2899, 2918
BstDSI CCRYGG 1 cut(s) 510
BstMAI GTCTC 4 cut(s) 819, 1096, 1364, 2051
BstMWI GCNNNNNNNGC 7 cut(s) 85, 671, 1374, 1400, 1736, 2210, 2585
BstNI CCWGG 5 cut(s) 72, 294, 1084, 1488, 1960
BstSCI CCNGG 6 cut(s) 70, 292, 1069, 1082, 1486, 1958
BstSFI CTRYAG 4 cut(s) 921, 1798, 2061, 2682
BstSLI GKGCMC 2 cut(s) 2137, 2991
BstV1I GCAGC 7 cut(s) 97, 652, 904, 985, 1848, 2665, 2668
BstV2I GAAGAC 3 cut(s) 267, 1799, 2927
BstX2I RGATCY 3 cut(s) 1910, 2419, 2504
BstXI CCANNNNNNTGG 1 cut(s) 2901
BstYI RGATCY 3 cut(s) 1910, 2419, 2504
BstZ17I GTATAC 1 cut(s) 2378
Bsu36I CCTNAGG 1 cut(s) 25
BsuRI GGCC 4 cut(s) 1155, 1302, 2955, 2989
BtgI CCRYGG 1 cut(s) 510
BtsI GCAGTG 1 cut(s) 2137
BtsIMutI CAGTG 6 cut(s) 350, 1787, 2137, 2178, 2860, 2976
BveI ACCTGC 1 cut(s) 2746
Cac8I GCNNGC 6 cut(s) 273, 1020, 1366, 2895, 2899, 2918
CaiI CAGNNNCTG 1 cut(s) 1876
CciI TCATGA 2 cut(s) 1036, 1432
Cfr13I GGNCC 5 cut(s) 524, 1154, 2954, 2987, 2988
CseI GACGC 1 cut(s) 2921
Csp6I GTAC 7 cut(s) 132, 302, 656, 1803, 2331, 2569, 2642
CspCI CAANNNNNGTGG 6 cut(s) 630, 665, 1146, 1181, 1657, 1692
CviQI GTAC 7 cut(s) 132, 302, 656, 1803, 2331, 2569, 2642
DraI TTTAAA 2 cut(s) 1077, 2764
Eam1104I CTCTTC 3 cut(s) 681, 1041, 2036
EarI CTCTTC 3 cut(s) 681, 1041, 2036
Eco130I CCWWGG 1 cut(s) 510
Eco24I GRGCYC 2 cut(s) 937, 2991
Eco32I GATATC 1 cut(s) 552
Eco47I GGWCC 1 cut(s) 524
Eco57I CTGAAG 6 cut(s) 65, 666, 1136, 1575, 1811, 1956
Eco81I CCTNAGG 1 cut(s) 25
EcoO109I RGGNCCY 1 cut(s) 2954
EcoRI GAATTC 2 cut(s) 493, 1219
EcoRII CCWGG 5 cut(s) 70, 292, 1082, 1486, 1958
EcoRV GATATC 1 cut(s) 552
EcoT14I CCWWGG 1 cut(s) 510
EcoT22I ATGCAT 2 cut(s) 637, 796
EcoT38I GRGCYC 2 cut(s) 937, 2991
ErhI CCWWGG 1 cut(s) 510
FalI AAGNNNNNCTT 4 cut(s) 654, 686, 1923, 1955
FaqI GGGAC 3 cut(s) 1344, 1921, 2026
FauI CCCGC 1 cut(s) 1744
FauNDI CATATG 1 cut(s) 796
FbaI TGATCA 2 cut(s) 1867, 1878
FblI GTMKAC 1 cut(s) 2377
Fnu4HI GCNGC 8 cut(s) 86, 666, 893, 974, 1837, 2679, 2682, 2868
FriOI GRGCYC 2 cut(s) 937, 2991
Fsp4HI GCNGC 8 cut(s) 86, 666, 893, 974, 1837, 2679, 2682, 2868
FspBI CTAG 6 cut(s) 731, 1137, 1286, 1539, 1859, 2898
GluI GCNGC 8 cut(s) 86, 666, 893, 974, 1837, 2679, 2682, 2868
GsaI CCCAGC 1 cut(s) 932
GsuI CTGGAG 4 cut(s) 1078, 1389, 2756, 2952
HaeIII GGCC 4 cut(s) 1155, 1302, 2955, 2989
HapII CCGG 4 cut(s) 359, 1070, 1224, 2018
HgaI GACGC 1 cut(s) 2921
HincII GTYRAC 2 cut(s) 2170, 2259
HindII GTYRAC 2 cut(s) 2170, 2259
HindIII AAGCTT 2 cut(s) 1375, 2914
HinfI GANTC 8 cut(s) 755, 1388, 1442, 1621, 1754, 1934, 2014, 2074
HpaI GTTAAC 1 cut(s) 2259
HpaII CCGG 4 cut(s) 359, 1070, 1224, 2018
HphI GGTGA 6 cut(s) 694, 877, 1502, 1540, 1760, 1873
Hpy166II GTNNAC 6 cut(s) 527, 907, 1805, 2170, 2259, 2378
Hpy8I GTNNAC 6 cut(s) 527, 907, 1805, 2170, 2259, 2378
HpyAV CCTTC 8 cut(s) 546, 1599, 1767, 1949, 2420, 2481, 2599, 2967
HpyCH4III ACNGT 6 cut(s) 102, 185, 345, 1461, 1768, 2864
HpyF10VI GCNNNNNNNGC 7 cut(s) 85, 671, 1374, 1400, 1736, 2210, 2585
Kpn2I TCCGGA 2 cut(s) 358, 1223
KpnI GGTACC 1 cut(s) 135
Ksp22I TGATCA 2 cut(s) 1867, 1878
KspAI GTTAAC 1 cut(s) 2259
LguI GCTCTTC 1 cut(s) 681
LmnI GCTCC 4 cut(s) 940, 1275, 1408, 2816
Lsp1109I GCAGC 7 cut(s) 97, 652, 904, 985, 1848, 2665, 2668
MaeI CTAG 6 cut(s) 731, 1137, 1286, 1539, 1859, 2898
MaeIII GTNAC 7 cut(s) 191, 1171, 1443, 1455, 1762, 2079, 2714
MfeI CAATTG 2 cut(s) 1149, 2820
MflI RGATCY 3 cut(s) 1910, 2419, 2504
MhlI GDGCHC 3 cut(s) 937, 2137, 2991
MlyI GAGTC 4 cut(s) 1451, 1615, 1943, 2008
MmeI TCCRAC 4 cut(s) 681, 1274, 1300, 1631
Mph1103I ATGCAT 2 cut(s) 637, 796
MroI TCCGGA 2 cut(s) 358, 1223
MroXI GAANNNNTTC 2 cut(s) 1418, 2588
MslI CAYNNNNRTG 4 cut(s) 992, 1209, 2721, 2748
MspCI CTTAAG 2 cut(s) 125, 2500
MspI CCGG 4 cut(s) 359, 1070, 1224, 2018
MspR9I CCNGG 6 cut(s) 72, 294, 1071, 1084, 1488, 1960
MssI GTTTAAAC 1 cut(s) 1077
MunI CAATTG 2 cut(s) 1149, 2820
Mva1269I GAATGC 3 cut(s) 155, 1342, 2590
MvaI CCWGG 5 cut(s) 72, 294, 1084, 1488, 1960
MwoI GCNNNNNNNGC 7 cut(s) 85, 671, 1374, 1400, 1736, 2210, 2585
NciI CCSGG 1 cut(s) 1071
NcoI CCATGG 1 cut(s) 510
NdeI CATATG 1 cut(s) 796
NheI GCTAGC 1 cut(s) 2897
NlaIV GGNNCC 5 cut(s) 133, 936, 1277, 2247, 2989
NmeAIII GCCGAG 1 cut(s) 2383
NmuCI GTSAC 4 cut(s) 1443, 1455, 1762, 2714
NsiI ATGCAT 2 cut(s) 637, 796
NspV TTCGAA 2 cut(s) 1771, 2540
OliI CACNNNNGTG 1 cut(s) 2721
PagI TCATGA 2 cut(s) 1036, 1432
PciSI GCTCTTC 1 cut(s) 681
PcsI WCGNNNNNNNCGW 1 cut(s) 744
PctI GAATGC 3 cut(s) 155, 1342, 2590
PdmI GAANNNNTTC 2 cut(s) 1418, 2588
PfeI GAWTC 4 cut(s) 755, 1388, 1754, 2074
PfoI TCCNGGA 1 cut(s) 292
PkrI GCNGC 8 cut(s) 87, 667, 894, 975, 1838, 2680, 2683, 2869
PleI GAGTC 4 cut(s) 1450, 1615, 1942, 2008
PmeI GTTTAAAC 1 cut(s) 1077
PpsI GAGTC 4 cut(s) 1450, 1615, 1942, 2008
PsiI TTATAA 1 cut(s) 546
Psp6I CCWGG 5 cut(s) 70, 292, 1082, 1486, 1958
PspFI CCCAGC 1 cut(s) 928
PspGI CCWGG 5 cut(s) 70, 292, 1082, 1486, 1958
PspN4I GGNNCC 5 cut(s) 133, 936, 1277, 2247, 2989
PspOMI GGGCCC 1 cut(s) 2987
PspPI GGNCC 5 cut(s) 524, 1154, 2954, 2987, 2988
PsrI GAACNNNNNNTAC 2 cut(s) 2865, 2897
PstI CTGCAG 1 cut(s) 2686
PstNI CAGNNNCTG 1 cut(s) 1876
PsuI RGATCY 3 cut(s) 1910, 2419, 2504
RsaI GTAC 7 cut(s) 133, 303, 657, 1804, 2332, 2570, 2643
RsaNI GTAC 7 cut(s) 132, 302, 656, 1803, 2331, 2569, 2642
RseI CAYNNNNRTG 4 cut(s) 992, 1209, 2721, 2748
SapI GCTCTTC 1 cut(s) 681
SatI GCNGC 8 cut(s) 86, 666, 893, 974, 1837, 2679, 2682, 2868
Sau96I GGNCC 5 cut(s) 524, 1154, 2954, 2987, 2988
SchI GAGTC 4 cut(s) 1451, 1615, 1943, 2008
ScrFI CCNGG 6 cut(s) 72, 294, 1071, 1084, 1488, 1960
SduI GDGCHC 3 cut(s) 937, 2137, 2991
SfcI CTRYAG 4 cut(s) 921, 1798, 2061, 2682
SfuI TTCGAA 2 cut(s) 1771, 2540
SinI GGWCC 1 cut(s) 524
SmiMI CAYNNNNRTG 4 cut(s) 992, 1209, 2721, 2748
SmlI CTYRAG 6 cut(s) 125, 171, 1518, 1946, 2500, 2854
SmoI CTYRAG 6 cut(s) 125, 171, 1518, 1946, 2500, 2854
SsiI CCGC 2 cut(s) 1737, 2868
SspMI CTAG 6 cut(s) 731, 1137, 1286, 1539, 1859, 2898
StyD4I CCNGG 6 cut(s) 70, 292, 1069, 1082, 1486, 1958
StyI CCWWGG 1 cut(s) 510
TaaI ACNGT 6 cut(s) 102, 185, 345, 1461, 1768, 2864
TaqI TCGA 5 cut(s) 117, 714, 945, 1771, 2540
TatI WGTACW 2 cut(s) 301, 1802
TauI GCSGC 1 cut(s) 2870
TfiI GAWTC 4 cut(s) 755, 1388, 1754, 2074
TscAI CASTG 6 cut(s) 350, 1794, 2144, 2185, 2867, 2976
TseFI GTSAC 4 cut(s) 1443, 1455, 1762, 2714
TseI GCWGC 7 cut(s) 85, 665, 892, 973, 1836, 2678, 2681
Tsp45I GTSAC 4 cut(s) 1443, 1455, 1762, 2714
TspGWI ACGGA 2 cut(s) 487, 2683
TspRI CASTG 6 cut(s) 350, 1794, 2144, 2185, 2867, 2976
Vha464I CTTAAG 2 cut(s) 125, 2500
VpaK11BI GGWCC 1 cut(s) 524
XapI RAATTY 5 cut(s) 478, 493, 1219, 1687, 2479
XcmI CCANNNNNNNNNTGG 2 cut(s) 142, 2203
XmiI GTMKAC 1 cut(s) 2377
XmnI GAANNNNTTC 2 cut(s) 1418, 2588
XspI CTAG 6 cut(s) 731, 1137, 1286, 1539, 1859, 2898
Zsp2I ATGCAT 2 cut(s) 637, 796
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.