RLG00000031276

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
3645120 .. 3645506
387 bp
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UTR
Exon/CDS
Intron
RLM00000031276

Sequence Viewer

Length: 387 bp
ATGGCAGCAAATTGTACCAAGATCGGCGAACAGGGTTATGATCGAGCTGAAGAAGTAAAGCAATTCGACGACGCCAAGCTCGGAGTCAAAGGCCTCATCGACTCGGGTCTCTCCTCCATCCCCCGAATCTTTATCCATCCACCCATAATATCACACCAATTCCAGCCCACGACCCAACCTGACGCTGAATCAATCCCCACCATCAACCTCTCCGACCTCCACTCTGATCGTCGCTCCACCATCATTGACCCATTTAATTTTAACCACCACACAGTGTTAGATTTGAACAATTCAAGATCCAAGCAGGTTCAGACAACACCAGACACAACAAACGATGTCCTCGCCGCCTCCTTGCCCTTCACAACATCACTCAGGATGTCAGTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

129

Amino Acids

14.14

Weight (kDa)

5.62

Isoelectric Point (pI)

42.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0019492)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 295
AciI CCGC 1 cut(s) 345
AclWI GGATC 1 cut(s) 291
AcuI CTGAAG 1 cut(s) 69
AcyI GRCGYC 1 cut(s) 72
AdeI CACNNNGTG 1 cut(s) 274
AfaI GTAC 1 cut(s) 16
AgsI TTSAA 2 cut(s) 286, 294
AluBI AGCT 2 cut(s) 47, 79
AluI AGCT 2 cut(s) 47, 79
Alw26I GTCTC 1 cut(s) 113
AlwI GGATC 1 cut(s) 291
Ama87I CYCGRG 1 cut(s) 103
AoxI GGCC 1 cut(s) 91
ApeKI GCWGC 1 cut(s) 5
AvaI CYCGRG 1 cut(s) 103
BbvI GCAGC 1 cut(s) 17
BccI CCATC 4 cut(s) 125, 144, 209, 248
BcoDI GTCTC 1 cut(s) 113
BfuAI ACCTGC 1 cut(s) 295
BisI GCNGC 2 cut(s) 6, 345
BlsI GCNGC 2 cut(s) 7, 346
BmeT110I CYCGRG 1 cut(s) 103
BoxI GACNNNNGTC 1 cut(s) 105
BsaHI GRCGYC 1 cut(s) 72
BsaI GGTCTC 1 cut(s) 113
BseGI GGATG 3 cut(s) 117, 136, 381
BseMII CTCAG 1 cut(s) 385
BseRI GAGGAG 1 cut(s) 103
BseXI GCAGC 1 cut(s) 17
BshFI GGCC 1 cut(s) 93
BsiHKCI CYCGRG 1 cut(s) 103
BsmAI GTCTC 1 cut(s) 113
BsnI GGCC 1 cut(s) 93
Bso31I GGTCTC 1 cut(s) 113
BsoBI CYCGRG 1 cut(s) 103
Bsp143I GATC 4 cut(s) 21, 40, 226, 296
BspACI CCGC 1 cut(s) 345
BspANI GGCC 1 cut(s) 93
BspCNI CTCAG 1 cut(s) 384
BspMI ACCTGC 1 cut(s) 295
BspPI GGATC 1 cut(s) 291
BspTNI GGTCTC 1 cut(s) 113
BssMI GATC 4 cut(s) 21, 40, 226, 296
BssNI GRCGYC 1 cut(s) 72
Bst4CI ACNGT 1 cut(s) 274
BstACI GRCGYC 1 cut(s) 72
BstDEI CTNAG 1 cut(s) 371
BstF5I GGATG 3 cut(s) 117, 136, 381
BstKTI GATC 4 cut(s) 24, 43, 229, 299
BstMAI GTCTC 1 cut(s) 113
BstMBI GATC 4 cut(s) 21, 40, 226, 296
BstPAI GACNNNNGTC 1 cut(s) 105
BstV1I GCAGC 1 cut(s) 17
BstX2I RGATCY 1 cut(s) 296
BstYI RGATCY 1 cut(s) 296
BsuRI GGCC 1 cut(s) 93
BtsCI GGATG 3 cut(s) 117, 136, 381
BtsIMutI CAGTG 2 cut(s) 279, 387
BveI ACCTGC 1 cut(s) 295
CseI GACGC 2 cut(s) 80, 191
Csp6I GTAC 1 cut(s) 15
CspCI CAANNNNNGTGG 2 cut(s) 226, 261
CviJI RGCY 4 cut(s) 47, 79, 93, 166
CviKI_1 RGCY 4 cut(s) 47, 79, 93, 166
CviQI GTAC 1 cut(s) 15
DdeI CTNAG 1 cut(s) 371
DpnI GATC 4 cut(s) 23, 42, 228, 298
DpnII GATC 4 cut(s) 21, 40, 226, 296
DraIII CACNNNGTG 1 cut(s) 274
Eco147I AGGCCT 1 cut(s) 93
Eco31I GGTCTC 1 cut(s) 113
Eco57I CTGAAG 1 cut(s) 69
Eco88I CYCGRG 1 cut(s) 103
FaiI YATR 2 cut(s) 39, 146
Fnu4HI GCNGC 2 cut(s) 6, 345
FokI GGATG 2 cut(s) 104, 123
Fsp4HI GCNGC 2 cut(s) 6, 345
GluI GCNGC 2 cut(s) 6, 345
HaeIII GGCC 1 cut(s) 93
HgaI GACGC 2 cut(s) 80, 191
Hin1I GRCGYC 1 cut(s) 72
HinfI GANTC 4 cut(s) 84, 101, 126, 188
Hpy188I TCNGA 4 cut(s) 83, 214, 226, 312
Hpy188III TCNNGA 2 cut(s) 294, 373
Hpy99I CGWCG 3 cut(s) 71, 74, 234
HpyAV CCTTC 1 cut(s) 367
HpyCH4III ACNGT 1 cut(s) 274
HpyF3I CTNAG 1 cut(s) 371
Hsp92I GRCGYC 1 cut(s) 72
Kzo9I GATC 4 cut(s) 21, 40, 226, 296
LmnI GCTCC 1 cut(s) 239
LpnPI CCDG 6 cut(s) 17, 176, 192, 290, 333, 358
Lsp1109I GCAGC 1 cut(s) 17
MalI GATC 4 cut(s) 23, 42, 228, 298
MboI GATC 4 cut(s) 21, 40, 226, 296
MboII GAAGA 1 cut(s) 62
MflI RGATCY 1 cut(s) 296
MluCI AATT 5 cut(s) 10, 62, 158, 256, 289
MlyI GAGTC 2 cut(s) 93, 95
MmeI TCCRAC 1 cut(s) 237
MnlI CCTC 6 cut(s) 104, 124, 218, 227, 350, 358
MseI TTAA 2 cut(s) 255, 261
NdeII GATC 4 cut(s) 21, 40, 226, 296
PceI AGGCCT 1 cut(s) 93
PfeI GAWTC 2 cut(s) 126, 188
PkrI GCNGC 2 cut(s) 7, 346
PleI GAGTC 2 cut(s) 92, 95
PpsI GAGTC 2 cut(s) 92, 95
PshAI GACNNNNGTC 1 cut(s) 105
PsuI RGATCY 1 cut(s) 296
RsaI GTAC 1 cut(s) 16
RsaNI GTAC 1 cut(s) 15
SaqAI TTAA 2 cut(s) 255, 261
SatI GCNGC 2 cut(s) 6, 345
Sau3AI GATC 4 cut(s) 21, 40, 226, 296
SchI GAGTC 2 cut(s) 93, 95
SetI ASST 6 cut(s) 49, 81, 181, 210, 219, 309
Sse9I AATT 5 cut(s) 10, 62, 158, 256, 289
SseBI AGGCCT 1 cut(s) 93
SsiI CCGC 1 cut(s) 345
StuI AGGCCT 1 cut(s) 93
TaaI ACNGT 1 cut(s) 274
TaqI TCGA 3 cut(s) 43, 66, 99
TasI AATT 5 cut(s) 10, 62, 158, 256, 289
TauI GCSGC 1 cut(s) 347
TfiI GAWTC 2 cut(s) 126, 188
Tru1I TTAA 2 cut(s) 255, 261
Tru9I TTAA 2 cut(s) 255, 261
TscAI CASTG 2 cut(s) 279, 387
TseI GCWGC 1 cut(s) 5
TspRI CASTG 2 cut(s) 279, 387
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.