RLG00000031417

Galactose binding lectin domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0016929
Physical Location & Seq
Forward (+)
4972156 .. 4976898
4743 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000031417

Sequence Viewer

Length: 2535 bp
ATGGGTAGCAAAAGTTGGGTGGCATTGGTTCTGTTTGTGATCATAGTTTTTGAGGGTTATTTCATTGAACCAGTAAATTCTGCCACTGTGACATATGACCATAGAGCACTGGTTATTGATGGGAAGCGGCGGGTTTTGCAGTCTGGTTCTATCCATTATCCTAGAACCACCCCTGAGGTGTGGCCGGAGATTATTAATAAGGCCAAGGAAGGAGGACTTGACGTGATAGAGAGTTATGTTTTCTGGAACTATCATGAGCCTGTAAAAGGCCAGTACTACTTTGAAGGCAGGTTTGATTTGGTGAGATTTGTAAAGACAGTGCAAGAAGCTGGCCTTCTAGTTCATTTGAGGATTGGCCCTTATGCTTGTGCTGAATGGAACTACGGGGGATTTCCTATTTGGTTACACTTCATTCCCGGAATTCAATTCCGTACTACAAATGCACCTTTTAAGAATGAAATGAAGCACTTTCTTGCAAAAATTGTTGAAATGATGAAGGAGGAGCATCTCTTTGCAGCACAAGGGGGGCCGATCATTCTTGCTCAGGTTGAAAATGAATATGGAAATGTCGAAGGGTCATATGGAGTTGGTGGAGAATTATATGTCAAATGGGCTGCAGAAACTGCTGTTAGTCTTAATACAAGTGTACCTTGGGTGATGTGTGTGCAAGATGATGCACCTGATCCAATCATAAACACATGCAATGGATTCTATTGTGATATGTTTTCCCCGAATTCTCCAAATAAACCGAAGATGTGGACAGAGAATTACAGTGGATGGTTCCTTGGATTCGGCAATCCAATTCCTTATAGACCTGTTGAGGATCTTGCTTTCGCTGTTGCACGGTTTTTTGAAACAGGTGGTACATTTCAAAACTATTATATGTATTTTGGTGGGACCAACTTTGGGAGAACAGCTGGAGGCCCTTTGGTTGCAACAAGCTATGATTATGATGCTCCTATAGATGAATATGGTTTTCTTAGACAGCCAAAATGGGGCCACCTGCGTGATTTGCACAAGGCAATAAAGCACTGTGAAGAGTATCTGATCAGCTCTGATCCCACTCAAGTGCAACTTGGAGTAAATTTAGAGGCGCATATCTACTATAAACATTCCAATGAGTGTGCAGCCTTTCTTGCCAATTATGGAAGTAAATCAGATGCAAATGTCACATTCAAAGGACATGTTTATTTCCTTCCAGCTTGGTCTGTAAGCATCCTTCCAGATTGTAAGAATGTTATATTCAACACCGCCAAGGTTGTCTCACAAAAAACTCTTGGAGATCCTCTTTTTGCCAGCACAACACTGAAACCATCTTCATGGGGATGGTACAAAGAAAGAGTTGGTATTTGGAGTAACAGTTCATTTAGTAGCCCAGGCTTACTGGAGCAGATAAGTACCACGAAAGATACTAGTGATTTTTTATGGTACTCAATAAGTATCAATGTGAATGAAAACATTGCACCTGGTCAAGGGAAAGAACTGTTTTTAAATATTGAGAGCCTGGGACACGCCGCTCTAGTTTTCGTAAACAAAAAGCCTATAGGATTTGGATATGGTAACCATGAAGATGCTAGCTTCATCCTTAATGAGAAGGTTGCTCTGAACCCTGGAAACAATACCATTGATATGTTGAGTATGATGATTGGTGTACAGAACTATGGACCATGGTTCGATGTTGCAGGAGCAGGAATTTTCTTTGTTGTTATTGCTGACTTAGAGACTGGAAAAGTTGATCTTTCTGATGAAGAATGGACCTACCAGGTAGGAGTGGAAGGGGAATACCTTGGATTGGATAACATAAGTCTCGCAAATAGTTCACTGTGGACTACAGGGGCTACTCCACCAGTTAATCAGACTTTGATATGGTACAAGGTTTCATTCCTTGCTCCTGAAGGAAAGGGTCCTTTGGCAATAGATCTTGCTAGCATGGGAAAGGGGCAGGCATGGGTTAATGGGCAGAGCATAGGTAGATATTGGTCTACGTATCTCTCACCATCTACTGGTTGCAACAGTAGCGGTGTTTGTGACTACAGGGGAGCCTATGATGCAAATAAATGTCTAAAGAACTGTGGTCAACCAGCTCAAACTCTGTACCATATTCCTCGTACTTGGGTGCAAGATGGAGAGAACCTTCTAGTTCTCCATGAGGAGCTTGGAGGTGACCCTTCAAAAATTTCTGTGAGGACACGAACTGGCCAAGAGATATGTGCATATGTATCAGACACTGATCCTCCACCTGCCAGTTCTTGGAAACCAAACTCTGAATTCATGTCTCAAAACCCTGAAGTTCAACTGAACTGTGAACAGGGATGGCACATTACTTCAATTAACTTTGCTAGCTATGGAACTCCTATCGGAAGCTGTGGCGCCACTTTCACTCTGGGAACTTGCAATGCTGATGTCTTAACAATCGTTGAGCAGGCTTGCCTTGGCAAAGAAGGATGTTCGATTACCATCTCCACAGAAACCTTAGGTGATCCTTGTCCAGGTGTGTTAAAGAGTTTAGCTGTTCAAGCTTTTTGCAGCAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Gal_Lectin Glyco_hydro_35

Protein Analysis

845

Amino Acids

93.34

Weight (kDa)

5.13

Isoelectric Point (pI)

34.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_35 PF01301 37 - 341 2.9e-116 Glycosyl hydrolases family 35
Glyco_hydro_42 PF02449 57 - 190 5.7e-06 Beta-galactosidase
GHD PF17834 364 - 420 1.9e-25 Beta-sandwich domain in beta galactosidase
BetaGal_gal-bd PF21467 621 - 711 1.4e-21 Beta-galactosidase, galactose-binding domain
SUEL_Lectin PF02140 766 - 842 7.2e-18 D-galactoside/L-rhamnose binding SUEL lectin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0016929)

Species Orthologous Gene IDs
malus_domestica MD10G1301600.v1.1
prunus_persica Prupe.4G038600_v2.0.a1
pyrus_communis pycom10g25440
rosa_chinensis RchiOBHm_Chr5g0006691
rosa_laevigata RLG00000031417 RLG00000031511
rosa_multiflora Rmu_sc0017347.1_g000002 Rmu_sc0018387.1_g000009
rosa_roxburghii Rroxscaffold_1G00069330
rosa_rugosa Rorug04G0423700
rosa_samantha Rh5AG051500 Rh5CG059000
rosa_wichuraiana Rw5G005080 Rw5G005300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1011, 2248
Acc36I ACCTGC 3 cut(s) 279, 1011, 2248
AccB1I GGYRCC 1 cut(s) 2369
AccB7I CCANNNNNTGG 2 cut(s) 2003, 2250
AccBSI CCGCTC 1 cut(s) 1517
AccI GTMKAC 1 cut(s) 1982
AciI CCGC 5 cut(s) 127, 130, 1251, 1515, 2019
AclWI GGATC 6 cut(s) 677, 831, 1052, 1277, 2225, 2474
AcoI YGGCCR 2 cut(s) 182, 2197
AcsI RAATTY 7 cut(s) 76, 420, 733, 1084, 1692, 2175, 2267
AcuI CTGAAG 2 cut(s) 1914, 2307
AcyI GRCGYC 1 cut(s) 2370
AfiI CCNNNNNNNGG 8 cut(s) 266, 906, 995, 1472, 1792, 2003, 2250, 2489
AflIII ACRYGT 1 cut(s) 1183
AhlI ACTAGT 1 cut(s) 1412
AjiI CACGTC 1 cut(s) 223
AjnI CCWGG 6 cut(s) 1375, 1465, 1503, 1609, 1761, 2488
AleI CACNNNNGTG 2 cut(s) 1005, 1067
AloI GAACNNNNNNTCC 2 cut(s) 1345, 1377
Alw21I GWGCWC 1 cut(s) 109
Alw26I GTCTC 4 cut(s) 1267, 1715, 1811, 2280
AlwI GGATC 6 cut(s) 677, 831, 1052, 1277, 2225, 2474
AlwNI CAGNNNCTG 2 cut(s) 623, 2228
AoxI GGCC 9 cut(s) 182, 201, 268, 331, 355, 527, 922, 997, 2197
ApeKI GCWGC 4 cut(s) 515, 614, 1127, 2526
ApoI RAATTY 7 cut(s) 76, 420, 733, 1084, 1692, 2175, 2267
AseI ATTAAT 1 cut(s) 195
AspLEI GCGC 2 cut(s) 1096, 2372
AspS9I GGNCC 8 cut(s) 356, 527, 897, 923, 997, 1664, 1755, 1904
AsuC2I CCSGG 1 cut(s) 417
AsuHPI GGTGA 5 cut(s) 313, 667, 1986, 2174, 2489
AsuNHI GCTAGC 3 cut(s) 1574, 1925, 2339
AvaII GGWCC 4 cut(s) 897, 1664, 1755, 1904
AxyI CCTNAGG 2 cut(s) 174, 2473
BaeI ACNNNNGTAYC 2 cut(s) 630, 663
BalI TGGCCA 1 cut(s) 2199
BanI GGYRCC 1 cut(s) 2369
BarI GAAGNNNNNNTAC 2 cut(s) 1203, 1235
Bbv12I GWGCWC 1 cut(s) 109
BbvI GCAGC 3 cut(s) 527, 601, 1139
BccI CCATC 8 cut(s) 113, 771, 1320, 1321, 2005, 2117, 2307, 2465
BciT130I CCWGG 6 cut(s) 1377, 1467, 1505, 1611, 1763, 2490
BclI TGATCA 2 cut(s) 39, 1047
BcnI CCSGG 1 cut(s) 417
BcoDI GTCTC 4 cut(s) 1267, 1715, 1811, 2280
BcuI ACTAGT 1 cut(s) 1412
BfaI CTAG 8 cut(s) 162, 338, 1413, 1520, 1575, 1926, 2138, 2340
BfmI CTRYAG 5 cut(s) 615, 960, 1542, 1830, 2032
BfoI RGCGCY 1 cut(s) 2373
BfuAI ACCTGC 3 cut(s) 279, 1011, 2248
BglII AGATCT 1 cut(s) 1918
BisI GCNGC 6 cut(s) 128, 516, 615, 1128, 1515, 2527
BlsI GCNGC 6 cut(s) 129, 517, 616, 1129, 1516, 2528
BmcAI AGTACT 1 cut(s) 275
Bme1390I CCNGG 7 cut(s) 417, 1377, 1467, 1505, 1611, 1763, 2490
Bme18I GGWCC 4 cut(s) 897, 1664, 1755, 1904
BmgBI CACGTC 1 cut(s) 223
BmgT120I GGNCC 8 cut(s) 356, 527, 897, 923, 997, 1664, 1755, 1904
BmiI GGNNCC 7 cut(s) 528, 782, 898, 998, 1905, 2041, 2371
BmrFI CCNGG 7 cut(s) 417, 1377, 1467, 1505, 1611, 1763, 2490
BmsI GCATC 7 cut(s) 514, 664, 943, 1150, 1224, 1561, 2038
BmtI GCTAGC 3 cut(s) 1578, 1929, 2343
BpmI CTGGAG 2 cut(s) 939, 1406
Bpu10I CCTNAGC 1 cut(s) 543
BpuEI CTTGAG 1 cut(s) 1050
BpuMI CCSGG 1 cut(s) 417
BsaAI YACGTR 1 cut(s) 1986
BsaBI GATNNNNATC 1 cut(s) 2456
BsaHI GRCGYC 1 cut(s) 2370
BsaXI ACNNNNNCTCC 4 cut(s) 1345, 1375, 2218, 2248
Bsc4I CCNNNNNNNGG 8 cut(s) 266, 906, 995, 1472, 1792, 2003, 2250, 2489
Bse1I ACTGG 9 cut(s) 71, 114, 271, 1389, 1729, 1847, 2008, 2200, 2244
Bse21I CCTNAGG 2 cut(s) 174, 2473
Bse3DI GCAATG 3 cut(s) 709, 1458, 2401
Bse8I GATNNNNATC 1 cut(s) 2456
BseBI CCWGG 6 cut(s) 1377, 1467, 1505, 1611, 1763, 2490
BseGI GGATG 6 cut(s) 782, 1215, 1331, 1581, 2318, 2450
BseJI GATNNNNATC 1 cut(s) 2456
BseLI CCNNNNNNNGG 8 cut(s) 266, 906, 995, 1472, 1792, 2003, 2250, 2489
BseMI GCAATG 3 cut(s) 709, 1458, 2401
BseMII CTCAG 2 cut(s) 165, 557
BseNI ACTGG 9 cut(s) 71, 114, 271, 1389, 1729, 1847, 2008, 2200, 2244
BseRI GAGGAG 2 cut(s) 515, 2165
BseXI GCAGC 3 cut(s) 527, 601, 1139
BsgI GTGCAG 1 cut(s) 1146
BshFI GGCC 9 cut(s) 184, 203, 270, 333, 357, 529, 924, 999, 2199
BshNI GGYRCC 1 cut(s) 2369
BsiHKAI GWGCWC 1 cut(s) 109
BsiSI CCGG 2 cut(s) 185, 417
BslFI GGGAC 2 cut(s) 910, 1521
BslI CCNNNNNNNGG 8 cut(s) 266, 906, 995, 1472, 1792, 2003, 2250, 2489
BsmAI GTCTC 4 cut(s) 1267, 1715, 1811, 2280
BsmFI GGGAC 2 cut(s) 910, 1521
BsnI GGCC 9 cut(s) 184, 203, 270, 333, 357, 529, 924, 999, 2199
Bsp1286I GDGCHC 1 cut(s) 109
Bsp1407I TGTACA 1 cut(s) 1651
Bsp19I CCATGG 1 cut(s) 1667
BspACI CCGC 5 cut(s) 127, 130, 1251, 1515, 2019
BspANI GGCC 9 cut(s) 184, 203, 270, 333, 357, 529, 924, 999, 2199
BspCNI CTCAG 2 cut(s) 166, 556
BspHI TCATGA 1 cut(s) 253
BspLI GGNNCC 7 cut(s) 528, 782, 898, 998, 1905, 2041, 2371
BspMAI CTGCAG 1 cut(s) 619
BspMI ACCTGC 3 cut(s) 279, 1011, 2248
BspOI GCTAGC 3 cut(s) 1578, 1929, 2343
BspPI GGATC 6 cut(s) 677, 831, 1052, 1277, 2225, 2474
BspT107I GGYRCC 1 cut(s) 2369
BsrBI CCGCTC 1 cut(s) 1517
BsrDI GCAATG 3 cut(s) 709, 1458, 2401
BsrGI TGTACA 1 cut(s) 1651
BsrI ACTGG 9 cut(s) 71, 114, 271, 1389, 1729, 1847, 2008, 2200, 2244
BssNI GRCGYC 1 cut(s) 2370
BssT1I CCWWGG 7 cut(s) 204, 650, 784, 1254, 1667, 1786, 2431
Bst2UI CCWGG 6 cut(s) 1377, 1467, 1505, 1611, 1763, 2490
Bst6I CTCTTC 1 cut(s) 1032
BstACI GRCGYC 1 cut(s) 2370
BstAPI GCANNNNNTGC 1 cut(s) 623
BstAUI TGTACA 1 cut(s) 1651
BstBAI YACGTR 1 cut(s) 1986
BstC8I GCNNGC 8 cut(s) 331, 1297, 1576, 1927, 1944, 2341, 2424, 2428
BstDEI CTNAG 5 cut(s) 174, 543, 980, 1717, 2473
BstDSI CCRYGG 1 cut(s) 1667
BstEII GGTNACC 2 cut(s) 1559, 2162
BstENI CCTNNNNNAGG 3 cut(s) 264, 1470, 2487
BstF5I GGATG 6 cut(s) 782, 1215, 1331, 1581, 2318, 2450
BstH2I RGCGCY 1 cut(s) 2373
BstHHI GCGC 2 cut(s) 1096, 2372
BstMAI GTCTC 4 cut(s) 1267, 1715, 1811, 2280
BstMWI GCNNNNNNNGC 7 cut(s) 136, 623, 1012, 1136, 2016, 2048, 2516
BstNI CCWGG 6 cut(s) 1377, 1467, 1505, 1611, 1763, 2490
BstNSI RCATGY 2 cut(s) 702, 1187
BstPI GGTNACC 2 cut(s) 1559, 2162
BstSCI CCNGG 7 cut(s) 415, 1375, 1465, 1503, 1609, 1761, 2488
BstSFI CTRYAG 5 cut(s) 615, 960, 1542, 1830, 2032
BstSNI TACGTA 1 cut(s) 1986
BstV1I GCAGC 3 cut(s) 527, 601, 1139
BstX2I RGATCY 3 cut(s) 823, 1282, 1918
BstXI CCANNNNNNTGG 1 cut(s) 1320
BstYI RGATCY 3 cut(s) 823, 1282, 1918
Bsu36I CCTNAGG 2 cut(s) 174, 2473
BsuRI GGCC 9 cut(s) 184, 203, 270, 333, 357, 529, 924, 999, 2199
BtgI CCRYGG 1 cut(s) 1667
BtrI CACGTC 1 cut(s) 223
BtsCI GGATG 6 cut(s) 782, 1215, 1331, 1581, 2318, 2450
BtsIMutI CAGTG 8 cut(s) 84, 107, 324, 778, 1030, 1304, 1820, 2226
BveI ACCTGC 3 cut(s) 279, 1011, 2248
Cac8I GCNNGC 8 cut(s) 331, 1297, 1576, 1927, 1944, 2341, 2424, 2428
CaiI CAGNNNCTG 2 cut(s) 623, 2228
CciI TCATGA 1 cut(s) 253
CfoI GCGC 2 cut(s) 1096, 2372
Cfr13I GGNCC 8 cut(s) 356, 527, 897, 923, 997, 1664, 1755, 1904
CsiI ACCWGGT 2 cut(s) 1465, 1761
DdeI CTNAG 5 cut(s) 174, 543, 980, 1717, 2473
DinI GGCGCC 1 cut(s) 2371
DraI TTTAAA 1 cut(s) 1491
EaeI YGGCCR 2 cut(s) 182, 2197
Eam1104I CTCTTC 1 cut(s) 1032
EarI CTCTTC 1 cut(s) 1032
Eco105I TACGTA 1 cut(s) 1986
Eco130I CCWWGG 7 cut(s) 204, 650, 784, 1254, 1667, 1786, 2431
Eco47I GGWCC 4 cut(s) 897, 1664, 1755, 1904
Eco57I CTGAAG 2 cut(s) 1914, 2307
Eco81I CCTNAGG 2 cut(s) 174, 2473
Eco91I GGTNACC 2 cut(s) 1559, 2162
EcoNI CCTNNNNNAGG 3 cut(s) 264, 1470, 2487
EcoO109I RGGNCCY 2 cut(s) 923, 1904
EcoO65I GGTNACC 2 cut(s) 1559, 2162
EcoRI GAATTC 3 cut(s) 420, 733, 2267
EcoRII CCWGG 6 cut(s) 1375, 1465, 1503, 1609, 1761, 2488
EcoT14I CCWWGG 7 cut(s) 204, 650, 784, 1254, 1667, 1786, 2431
EgeI GGCGCC 1 cut(s) 2371
EheI GGCGCC 1 cut(s) 2371
ErhI CCWWGG 7 cut(s) 204, 650, 784, 1254, 1667, 1786, 2431
FaqI GGGAC 2 cut(s) 910, 1521
FauI CCCGC 1 cut(s) 123
FauNDI CATATG 3 cut(s) 94, 580, 2215
FbaI TGATCA 2 cut(s) 39, 1047
FblI GTMKAC 1 cut(s) 1982
Fnu4HI GCNGC 6 cut(s) 128, 516, 615, 1128, 1515, 2527
FokI GGATG 6 cut(s) 789, 1202, 1338, 1568, 2325, 2457
Fsp4HI GCNGC 6 cut(s) 128, 516, 615, 1128, 1515, 2527
FspBI CTAG 8 cut(s) 162, 338, 1413, 1520, 1575, 1926, 2138, 2340
GlaI GCGC 2 cut(s) 1095, 2371
GluI GCNGC 6 cut(s) 128, 516, 615, 1128, 1515, 2527
GsuI CTGGAG 2 cut(s) 939, 1406
HaeII RGCGCY 1 cut(s) 2373
HaeIII GGCC 9 cut(s) 184, 203, 270, 333, 357, 529, 924, 999, 2199
HapII CCGG 2 cut(s) 185, 417
HhaI GCGC 2 cut(s) 1096, 2372
Hin1I GRCGYC 1 cut(s) 2370
Hin6I GCGC 2 cut(s) 1094, 2370
HinP1I GCGC 2 cut(s) 1094, 2370
HincII GTYRAC 1 cut(s) 2078
HindII GTYRAC 1 cut(s) 2078
HindIII AAGCTT 1 cut(s) 2517
HinfI GANTC 2 cut(s) 708, 789
HpaII CCGG 2 cut(s) 185, 417
HphI GGTGA 5 cut(s) 313, 667, 1986, 2174, 2489
Hpy166II GTNNAC 9 cut(s) 647, 759, 1531, 1652, 1820, 1827, 1983, 2078, 2306
Hpy188I TCNGA 9 cut(s) 1047, 1057, 1159, 1605, 1744, 1857, 2224, 2266, 2360
Hpy188III TCNNGA 4 cut(s) 244, 254, 1223, 1892
Hpy8I GTNNAC 9 cut(s) 647, 759, 1531, 1652, 1820, 1827, 1983, 2078, 2306
HpyCH4IV ACGT 2 cut(s) 222, 1985
HpyF10VI GCNNNNNNNGC 7 cut(s) 136, 623, 1012, 1136, 2016, 2048, 2516
HpyF3I CTNAG 5 cut(s) 174, 543, 980, 1717, 2473
HpySE526I ACGT 2 cut(s) 222, 1985
Hsp92I GRCGYC 1 cut(s) 2370
HspAI GCGC 2 cut(s) 1094, 2370
KasI GGCGCC 1 cut(s) 2369
Ksp22I TGATCA 2 cut(s) 39, 1047
LmnI GCTCC 7 cut(s) 502, 961, 1387, 1685, 1894, 2039, 2152
Lsp1109I GCAGC 3 cut(s) 527, 601, 1139
LweI GCATC 7 cut(s) 514, 664, 943, 1150, 1224, 1561, 2038
MabI ACCWGGT 2 cut(s) 1465, 1761
MaeI CTAG 8 cut(s) 162, 338, 1413, 1520, 1575, 1926, 2138, 2340
MaeII ACGT 2 cut(s) 222, 1985
MaeIII GTNAC 7 cut(s) 88, 402, 1168, 1355, 1559, 2027, 2162
MbiI CCGCTC 1 cut(s) 1517
MboII GAAGA 5 cut(s) 763, 1049, 1308, 1580, 1760
MfeI CAATTG 1 cut(s) 2530
MflI RGATCY 3 cut(s) 823, 1282, 1918
MhlI GDGCHC 1 cut(s) 109
MlsI TGGCCA 1 cut(s) 2199
MluNI TGGCCA 1 cut(s) 2199
Mly113I GGCGCC 1 cut(s) 2370
Mox20I TGGCCA 1 cut(s) 2199
MscI TGGCCA 1 cut(s) 2199
MslI CAYNNNNRTG 7 cut(s) 1005, 1067, 1116, 1318, 1324, 1569, 1628
Msp20I TGGCCA 1 cut(s) 2199
MspA1I CMGCKG 1 cut(s) 917
MspI CCGG 2 cut(s) 185, 417
MspR9I CCNGG 7 cut(s) 417, 1377, 1467, 1505, 1611, 1763, 2490
MunI CAATTG 1 cut(s) 2530
MvaI CCWGG 6 cut(s) 1377, 1467, 1505, 1611, 1763, 2490
MwoI GCNNNNNNNGC 7 cut(s) 136, 623, 1012, 1136, 2016, 2048, 2516
NarI GGCGCC 1 cut(s) 2370
NciI CCSGG 1 cut(s) 417
NcoI CCATGG 1 cut(s) 1667
NdeI CATATG 3 cut(s) 94, 580, 2215
NheI GCTAGC 3 cut(s) 1574, 1925, 2339
NlaIV GGNNCC 7 cut(s) 528, 782, 898, 998, 1905, 2041, 2371
NmuCI GTSAC 4 cut(s) 88, 1168, 2027, 2162
NspI RCATGY 2 cut(s) 702, 1187
OliI CACNNNNGTG 2 cut(s) 1005, 1067
PagI TCATGA 1 cut(s) 253
PaqCI CACCTGC 2 cut(s) 1011, 2248
PciI ACATGT 1 cut(s) 1183
PfeI GAWTC 2 cut(s) 708, 789
PflMI CCANNNNNTGG 2 cut(s) 2003, 2250
PfoI TCCNGGA 1 cut(s) 415
PkrI GCNGC 6 cut(s) 129, 517, 616, 1129, 1516, 2528
PluTI GGCGCC 1 cut(s) 2373
Ppu21I YACGTR 1 cut(s) 1986
PpuMI RGGWCCY 1 cut(s) 1904
PscI ACATGT 1 cut(s) 1183
PshBI ATTAAT 1 cut(s) 195
Psp5II RGGWCCY 1 cut(s) 1904
Psp6I CCWGG 6 cut(s) 1375, 1465, 1503, 1609, 1761, 2488
PspEI GGTNACC 2 cut(s) 1559, 2162
PspGI CCWGG 6 cut(s) 1375, 1465, 1503, 1609, 1761, 2488
PspN4I GGNNCC 7 cut(s) 528, 782, 898, 998, 1905, 2041, 2371
PspPI GGNCC 8 cut(s) 356, 527, 897, 923, 997, 1664, 1755, 1904
PspPPI RGGWCCY 1 cut(s) 1904
PstI CTGCAG 1 cut(s) 619
PstNI CAGNNNCTG 2 cut(s) 623, 2228
PsuI RGATCY 3 cut(s) 823, 1282, 1918
PvuII CAGCTG 1 cut(s) 917
RseI CAYNNNNRTG 7 cut(s) 1005, 1067, 1116, 1318, 1324, 1569, 1628
SatI GCNGC 6 cut(s) 128, 516, 615, 1128, 1515, 2527
Sau96I GGNCC 8 cut(s) 356, 527, 897, 923, 997, 1664, 1755, 1904
ScaI AGTACT 1 cut(s) 275
ScrFI CCNGG 7 cut(s) 417, 1377, 1467, 1505, 1611, 1763, 2490
SduI GDGCHC 1 cut(s) 109
SexAI ACCWGGT 2 cut(s) 1465, 1761
SfaNI GCATC 7 cut(s) 514, 664, 943, 1150, 1224, 1561, 2038
SfcI CTRYAG 5 cut(s) 615, 960, 1542, 1830, 2032
SfoI GGCGCC 1 cut(s) 2371
SinI GGWCC 4 cut(s) 897, 1664, 1755, 1904
SmiMI CAYNNNNRTG 7 cut(s) 1005, 1067, 1116, 1318, 1324, 1569, 1628
SmlI CTYRAG 1 cut(s) 1065
SmoI CTYRAG 1 cut(s) 1065
SnaBI TACGTA 1 cut(s) 1986
SpeI ACTAGT 1 cut(s) 1412
SsiI CCGC 5 cut(s) 127, 130, 1251, 1515, 2019
SspDI GGCGCC 1 cut(s) 2369
SspI AATATT 1 cut(s) 1495
SspMI CTAG 8 cut(s) 162, 338, 1413, 1520, 1575, 1926, 2138, 2340
StyD4I CCNGG 7 cut(s) 415, 1375, 1465, 1503, 1609, 1761, 2488
StyI CCWWGG 7 cut(s) 204, 650, 784, 1254, 1667, 1786, 2431
TaiI ACGT 2 cut(s) 225, 1988
TaqI TCGA 3 cut(s) 570, 1674, 2450
TatI WGTACW 2 cut(s) 273, 1651
TauI GCSGC 2 cut(s) 130, 1517
TfiI GAWTC 2 cut(s) 708, 789
TscAI CASTG 8 cut(s) 91, 114, 324, 778, 1037, 1311, 1827, 2233
TseFI GTSAC 4 cut(s) 88, 1168, 2027, 2162
TseI GCWGC 4 cut(s) 515, 614, 1127, 2526
Tsp45I GTSAC 4 cut(s) 88, 1168, 2027, 2162
TspGWI ACGGA 1 cut(s) 419
TspRI CASTG 8 cut(s) 91, 114, 324, 778, 1037, 1311, 1827, 2233
Van91I CCANNNNNTGG 2 cut(s) 2003, 2250
VpaK11BI GGWCC 4 cut(s) 897, 1664, 1755, 1904
VspI ATTAAT 1 cut(s) 195
XagI CCTNNNNNAGG 3 cut(s) 264, 1470, 2487
XapI RAATTY 7 cut(s) 76, 420, 733, 1084, 1692, 2175, 2267
XceI RCATGY 2 cut(s) 702, 1187
XcmI CCANNNNNNNNNTGG 2 cut(s) 2153, 2380
XmiI GTMKAC 1 cut(s) 1982
XspI CTAG 8 cut(s) 162, 338, 1413, 1520, 1575, 1926, 2138, 2340
ZrmI AGTACT 1 cut(s) 275
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.