Rroxscaffold_1G00069330

Galactose binding lectin domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0016929
Physical Location & Seq
Reverse (-)
90298692 .. 90304135
5444 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00069330.1

Sequence Viewer

Length: 2184 bp
ATGGGTAGCAAAAGTTGGGTGGCATTGGTTCTGTTTGTGATCATAGTTTTTGAGGGTTATTTCATTGAACCAGTAAATTCTGCCACTGTGACATATGACCATAGAGCACTGGTTATTGATGGGAAGCGGCGGGTTTTGCAGTCTGGTTCTATCCATTATCCTAGAACCACCCCTGAGGTGTGGCCGGAGATTATTAATAAGGCCAAGGAAGGAGGACTTGACGTGATAGAGAGTTATGTTTTCTGGAACTATCATGAGCCTGTAAAAGGCCAGTACTACTTTGAAGGCAGGTTTGATTTGGTGAGATTTGTGAAGACAGTGCAAGAAGCTGGCCTTCTAGTTCATTTGCGGATTGGCCCTTATGCTTGTGCTGAATGGAACTACGGGGGATTTCCTATTTGGTTGCACTTCATTCCCGGAATTCAATTCCGTACTACAAATGCACCTTTTAAGAATGAAATGAAGCACTTTCTTGCAAAAATTGTTGAAATGATGAAGGAGGAGCATCTCTTTGCATCACAAGGGGGGCCGATCATTCTTGCTCAGGTTGAAAATGAATACGGAAATGTCGAAGGGTCATATGGAGTTGGCGGAGAATTATATGTCAAATGGGCTGCAGAAACTGCTGTTAGTCTTAATACAAGTGTACCTTGGGTGATGTGTGTGCAAGATGATGCACCTGATCCAATTATAAACACATGCAATGGATTTTATTGTGATATGTTTGCCCCGAATTCTCCCAATAAACCGAAGATGTGGACAGAGAATTACAGCGGATGGTTCCTTGGATTCGGCAATCCAATTCCTTATAGACCTGTTGAGGATCTTGCTTTTGCTGTTGCACGGTTTTTTGAAACAGGTGGTACATTTCAAAACTATTATATGTATTTTGGTGGGACCAACTTCGGGAGAACAGCTGGAGGCCCTTTGGTTGCAACAAGCTATGATTATGATGCTCCTATAGATGAATATGGTTTTCTTAGACAGCCAAAATGGGGCCACCTGCGTGATTTGCACAAGGCAATAAAGCACTGTGAAGAGTATCTGATCAGCTCTGATCCCACTCAAGTGCAACTGGGAGTAAACTTAGAGGCGCATATCTACTATAAACATTCCAATGAGTGTGCAGCCTTTCTTGCCAATTATGGAAGTAGATCAGATGCAAAGGTCACATTCAACGGACATGTTTATTTCCTTCCAGCTTGGTCTGTAAGCATCCTTCCAGATTGTAAGAATGTTATATTCAACACCGCCAAGGTTGTCTCACAAAAAACTCTTGGAGATCCTCTTTTTGCCAGCACAACACTGAAACCATCTTCATGGGGATGGTACAAAGAAAGAGTTGGTATTTTTAGTAACAGTTCATTCAGTAGCCCAGGCTTACTGGAGCAGATAAGTACCACGAAAGATACTAGTGATTTTTTATGGTACTCAATAAGTATCAATGTGAATGAAAACATTGCACCTGGTCAAGGGAAAGAACTGTTTTTAAATATTGAGAGCCTGGGACACGCTGCTCTAGTTTTCGTAAACAAAAAGCCTATAGGATTTGGATATGGTAACCATGAAGATGCTAGCTTCATCCTTAATGAGAAGGTTTCTCTGAACCCTGGAAACAATACCATTGATATGTTGAGTATGATGATTGGTGTACAGAACTATGGACCGTGGTTCGATGTTGCAGGAGCAGGAATTTTCTTTGTTGTTATTGCTGACTTAGAGACTGGAAAAGTTGATCTTTCTGATGAAGAATGGACCTACCAGGTAGGAGTGGAAGGGGAATACCTTGGATTGGATAACATAAGTCTCGCAAATAGTTCACTGTGGACTACAGGGGCTACTCCACCAGTTAATCAGACTTTGATATGGTACAAGGTTTCATTCCTTGCTCCTGAAGGAAAGGGTCCTTTGGCATTAGATCTTGCTAGCATGGGAAAGGGCCAGGCCTGGGTTAATGGGCAGAGCATAGGGAGATATTGGTCTACTTATCTCTCACCATCTACTGGTTGCAACAGTAGCGGTGTTTGCGACTACAGGGGAGCCTATGATGCAAATAAATGTCTAAAGAACTGTGGTCAACCAGCTCAAACTCTGTACCATATTCCTCGTACTTGGGTGCAAGATGGAGAGAACCTTCTAGTTCTCCATGAAGAGCTTGGGGTGACCCTTCAAAAATTTGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Gal_Lectin Glyco_hydro_35

Protein Analysis

727

Amino Acids

81.13

Weight (kDa)

5.35

Isoelectric Point (pI)

34.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_35 PF01301 37 - 341 1.3e-116 Glycosyl hydrolases family 35
Glyco_hydro_42 PF02449 57 - 190 4.9e-06 Beta-galactosidase
GHD PF17834 364 - 420 3.7e-25 Beta-sandwich domain in beta galactosidase
BetaGal_gal-bd PF21467 621 - 711 4.9e-22 Beta-galactosidase, galactose-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016929)

Species Orthologous Gene IDs
malus_domestica MD10G1301600.v1.1
prunus_persica Prupe.4G038600_v2.0.a1
pyrus_communis pycom10g25440
rosa_chinensis RchiOBHm_Chr5g0006691
rosa_laevigata RLG00000031417 RLG00000031511
rosa_multiflora Rmu_sc0017347.1_g000002 Rmu_sc0018387.1_g000009
rosa_roxburghii Rroxscaffold_1G00069330
rosa_rugosa Rorug04G0423700
rosa_samantha Rh5AG051500 Rh5CG059000
rosa_wichuraiana Rw5G005080 Rw5G005300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 692
AarI CACCTGC 1 cut(s) 1011
Acc36I ACCTGC 2 cut(s) 279, 1011
AccB7I CCANNNNNTGG 1 cut(s) 2003
AccI GTMKAC 1 cut(s) 1982
AciI CCGC 7 cut(s) 127, 130, 349, 591, 774, 1251, 2019
AclWI GGATC 4 cut(s) 677, 831, 1052, 1277
AcoI YGGCCR 1 cut(s) 182
AcsI RAATTY 5 cut(s) 76, 420, 733, 1692, 2174
AcuI CTGAAG 1 cut(s) 1914
AfiI CCNNNNNNNGG 7 cut(s) 266, 906, 995, 1472, 1792, 1948, 2003
AflIII ACRYGT 1 cut(s) 1183
AhlI ACTAGT 1 cut(s) 1412
AjiI CACGTC 1 cut(s) 223
AjnI CCWGG 7 cut(s) 1375, 1465, 1503, 1609, 1761, 1941, 1946
AleI CACNNNNGTG 2 cut(s) 1005, 1067
AluBI AGCT 8 cut(s) 329, 917, 942, 1053, 1202, 1578, 2084, 2155
AluI AGCT 8 cut(s) 329, 917, 942, 1053, 1202, 1578, 2084, 2155
Alw21I GWGCWC 1 cut(s) 109
Alw26I GTCTC 3 cut(s) 1267, 1715, 1811
AlwI GGATC 4 cut(s) 677, 831, 1052, 1277
AlwNI CAGNNNCTG 1 cut(s) 623
ApeKI GCWGC 3 cut(s) 614, 1127, 1514
ApoI RAATTY 5 cut(s) 76, 420, 733, 1692, 2174
AseI ATTAAT 1 cut(s) 195
AspLEI GCGC 1 cut(s) 1096
AspS9I GGNCC 9 cut(s) 356, 527, 897, 923, 997, 1664, 1755, 1904, 1939
AsuC2I CCSGG 1 cut(s) 417
AsuHPI GGTGA 4 cut(s) 313, 667, 1986, 2173
AsuNHI GCTAGC 2 cut(s) 1574, 1925
AvaII GGWCC 4 cut(s) 897, 1664, 1755, 1904
AxyI CCTNAGG 1 cut(s) 174
BaeI ACNNNNGTAYC 2 cut(s) 630, 663
BarI GAAGNNNNNNTAC 2 cut(s) 1203, 1235
BbsI GAAGAC 1 cut(s) 320
Bbv12I GWGCWC 1 cut(s) 109
BbvI GCAGC 3 cut(s) 601, 1139, 1501
BccI CCATC 6 cut(s) 113, 771, 1320, 1321, 2005, 2117
BciT130I CCWGG 7 cut(s) 1377, 1467, 1505, 1611, 1763, 1943, 1948
BclI TGATCA 2 cut(s) 39, 1047
BcnI CCSGG 1 cut(s) 417
BcoDI GTCTC 3 cut(s) 1267, 1715, 1811
BcuI ACTAGT 1 cut(s) 1412
BfaI CTAG 7 cut(s) 162, 338, 1413, 1520, 1575, 1926, 2138
BfmI CTRYAG 5 cut(s) 615, 960, 1542, 1830, 2032
BfuAI ACCTGC 2 cut(s) 279, 1011
BglII AGATCT 1 cut(s) 1918
BisI GCNGC 4 cut(s) 128, 615, 1128, 1515
BlsI GCNGC 4 cut(s) 129, 616, 1129, 1516
BmcAI AGTACT 1 cut(s) 275
Bme1390I CCNGG 8 cut(s) 417, 1377, 1467, 1505, 1611, 1763, 1943, 1948
Bme18I GGWCC 4 cut(s) 897, 1664, 1755, 1904
BmgBI CACGTC 1 cut(s) 223
BmgT120I GGNCC 9 cut(s) 356, 527, 897, 923, 997, 1664, 1755, 1904, 1939
BmiI GGNNCC 6 cut(s) 528, 782, 898, 998, 1905, 2041
BmrFI CCNGG 8 cut(s) 417, 1377, 1467, 1505, 1611, 1763, 1943, 1948
BmrI ACTGGG 1 cut(s) 1085
BmsI GCATC 8 cut(s) 514, 524, 664, 943, 1150, 1224, 1561, 2038
BmtI GCTAGC 2 cut(s) 1578, 1929
BmuI ACTGGG 1 cut(s) 1085
BpiI GAAGAC 1 cut(s) 320
BpmI CTGGAG 2 cut(s) 939, 1406
Bpu10I CCTNAGC 1 cut(s) 543
BpuEI CTTGAG 1 cut(s) 1050
BpuMI CCSGG 1 cut(s) 417
Bsc4I CCNNNNNNNGG 7 cut(s) 266, 906, 995, 1472, 1792, 1948, 2003
Bse1I ACTGG 8 cut(s) 71, 114, 271, 1080, 1389, 1729, 1847, 2008
Bse21I CCTNAGG 1 cut(s) 174
Bse3DI GCAATG 2 cut(s) 709, 1458
BseBI CCWGG 7 cut(s) 1377, 1467, 1505, 1611, 1763, 1943, 1948
BseGI GGATG 4 cut(s) 782, 1215, 1331, 1581
BseLI CCNNNNNNNGG 7 cut(s) 266, 906, 995, 1472, 1792, 1948, 2003
BseMI GCAATG 2 cut(s) 709, 1458
BseMII CTCAG 2 cut(s) 165, 557
BseNI ACTGG 8 cut(s) 71, 114, 271, 1080, 1389, 1729, 1847, 2008
BseRI GAGGAG 1 cut(s) 515
BseXI GCAGC 3 cut(s) 601, 1139, 1501
BsgI GTGCAG 1 cut(s) 1146
BsiHKAI GWGCWC 1 cut(s) 109
BsiSI CCGG 2 cut(s) 185, 417
BslFI GGGAC 2 cut(s) 910, 1521
BslI CCNNNNNNNGG 7 cut(s) 266, 906, 995, 1472, 1792, 1948, 2003
BsmAI GTCTC 3 cut(s) 1267, 1715, 1811
BsmFI GGGAC 2 cut(s) 910, 1521
Bsp1286I GDGCHC 1 cut(s) 109
Bsp1407I TGTACA 1 cut(s) 1651
BspACI CCGC 7 cut(s) 127, 130, 349, 591, 774, 1251, 2019
BspCNI CTCAG 2 cut(s) 166, 556
BspHI TCATGA 1 cut(s) 253
BspLI GGNNCC 6 cut(s) 528, 782, 898, 998, 1905, 2041
BspMAI CTGCAG 1 cut(s) 619
BspMI ACCTGC 2 cut(s) 279, 1011
BspOI GCTAGC 2 cut(s) 1578, 1929
BspPI GGATC 4 cut(s) 677, 831, 1052, 1277
BspQI GCTCTTC 1 cut(s) 2145
BsrDI GCAATG 2 cut(s) 709, 1458
BsrGI TGTACA 1 cut(s) 1651
BsrI ACTGG 8 cut(s) 71, 114, 271, 1080, 1389, 1729, 1847, 2008
BssT1I CCWWGG 5 cut(s) 204, 650, 784, 1254, 1786
Bst2UI CCWGG 7 cut(s) 1377, 1467, 1505, 1611, 1763, 1943, 1948
Bst6I CTCTTC 2 cut(s) 1032, 2145
BstAPI GCANNNNNTGC 1 cut(s) 623
BstAUI TGTACA 1 cut(s) 1651
BstC8I GCNNGC 4 cut(s) 331, 1297, 1576, 1927
BstDEI CTNAG 5 cut(s) 174, 543, 980, 1087, 1717
BstDSI CCRYGG 1 cut(s) 1667
BstEII GGTNACC 2 cut(s) 1559, 2161
BstENI CCTNNNNNAGG 2 cut(s) 264, 1470
BstF5I GGATG 4 cut(s) 782, 1215, 1331, 1581
BstHHI GCGC 1 cut(s) 1096
BstMAI GTCTC 3 cut(s) 1267, 1715, 1811
BstMWI GCNNNNNNNGC 7 cut(s) 136, 623, 1012, 1136, 2016, 2025, 2048
BstNI CCWGG 7 cut(s) 1377, 1467, 1505, 1611, 1763, 1943, 1948
BstNSI RCATGY 2 cut(s) 702, 1187
BstPI GGTNACC 2 cut(s) 1559, 2161
BstSCI CCNGG 8 cut(s) 415, 1375, 1465, 1503, 1609, 1761, 1941, 1946
BstSFI CTRYAG 5 cut(s) 615, 960, 1542, 1830, 2032
BstV1I GCAGC 3 cut(s) 601, 1139, 1501
BstV2I GAAGAC 1 cut(s) 320
BstX2I RGATCY 3 cut(s) 823, 1282, 1918
BstXI CCANNNNNNTGG 1 cut(s) 1320
BstYI RGATCY 3 cut(s) 823, 1282, 1918
Bsu36I CCTNAGG 1 cut(s) 174
BtgI CCRYGG 1 cut(s) 1667
BtrI CACGTC 1 cut(s) 223
BtsCI GGATG 4 cut(s) 782, 1215, 1331, 1581
BtsIMutI CAGTG 6 cut(s) 84, 107, 324, 1030, 1304, 1820
BveI ACCTGC 2 cut(s) 279, 1011
Cac8I GCNNGC 4 cut(s) 331, 1297, 1576, 1927
CaiI CAGNNNCTG 1 cut(s) 623
CciI TCATGA 1 cut(s) 253
CfoI GCGC 1 cut(s) 1096
Cfr13I GGNCC 9 cut(s) 356, 527, 897, 923, 997, 1664, 1755, 1904, 1939
CsiI ACCWGGT 2 cut(s) 1465, 1761
CviAII CATG 7 cut(s) 254, 699, 1184, 1320, 1565, 1930, 2147
DdeI CTNAG 5 cut(s) 174, 543, 980, 1087, 1717
DraI TTTAAA 1 cut(s) 1491
EaeI YGGCCR 1 cut(s) 182
Eam1104I CTCTTC 2 cut(s) 1032, 2145
EarI CTCTTC 2 cut(s) 1032, 2145
EciI GGCGGA 1 cut(s) 606
Eco130I CCWWGG 5 cut(s) 204, 650, 784, 1254, 1786
Eco147I AGGCCT 1 cut(s) 1946
Eco47I GGWCC 4 cut(s) 897, 1664, 1755, 1904
Eco57I CTGAAG 1 cut(s) 1914
Eco81I CCTNAGG 1 cut(s) 174
Eco91I GGTNACC 2 cut(s) 1559, 2161
EcoNI CCTNNNNNAGG 2 cut(s) 264, 1470
EcoO109I RGGNCCY 2 cut(s) 923, 1904
EcoO65I GGTNACC 2 cut(s) 1559, 2161
EcoRI GAATTC 2 cut(s) 420, 733
EcoRII CCWGG 7 cut(s) 1375, 1465, 1503, 1609, 1761, 1941, 1946
EcoT14I CCWWGG 5 cut(s) 204, 650, 784, 1254, 1786
ErhI CCWWGG 5 cut(s) 204, 650, 784, 1254, 1786
FaeI CATG 7 cut(s) 257, 702, 1187, 1323, 1568, 1933, 2150
FalI AAGNNNNNCTT 8 cut(s) 201, 233, 318, 350, 634, 666, 1722, 1754
FaqI GGGAC 2 cut(s) 910, 1521
FatI CATG 7 cut(s) 253, 698, 1183, 1319, 1564, 1929, 2146
FauI CCCGC 1 cut(s) 123
FauNDI CATATG 2 cut(s) 94, 580
FbaI TGATCA 2 cut(s) 39, 1047
FblI GTMKAC 1 cut(s) 1982
Fnu4HI GCNGC 4 cut(s) 128, 615, 1128, 1515
FokI GGATG 4 cut(s) 789, 1202, 1338, 1568
Fsp4HI GCNGC 4 cut(s) 128, 615, 1128, 1515
FspBI CTAG 7 cut(s) 162, 338, 1413, 1520, 1575, 1926, 2138
GlaI GCGC 1 cut(s) 1095
GluI GCNGC 4 cut(s) 128, 615, 1128, 1515
GsuI CTGGAG 2 cut(s) 939, 1406
HapII CCGG 2 cut(s) 185, 417
HhaI GCGC 1 cut(s) 1096
Hin1II CATG 7 cut(s) 257, 702, 1187, 1323, 1568, 1933, 2150
Hin6I GCGC 1 cut(s) 1094
HinP1I GCGC 1 cut(s) 1094
HincII GTYRAC 1 cut(s) 2078
HindII GTYRAC 1 cut(s) 2078
HinfI GANTC 1 cut(s) 789
HpaII CCGG 2 cut(s) 185, 417
HphI GGTGA 4 cut(s) 313, 667, 1986, 2173
Hpy166II GTNNAC 9 cut(s) 647, 759, 1084, 1531, 1652, 1820, 1827, 1983, 2078
Hpy188I TCNGA 6 cut(s) 1047, 1057, 1159, 1605, 1744, 1857
Hpy188III TCNNGA 5 cut(s) 244, 254, 907, 1223, 1892
Hpy8I GTNNAC 9 cut(s) 647, 759, 1084, 1531, 1652, 1820, 1827, 1983, 2078
HpyCH4IV ACGT 1 cut(s) 222
HpyF10VI GCNNNNNNNGC 7 cut(s) 136, 623, 1012, 1136, 2016, 2025, 2048
HpyF3I CTNAG 5 cut(s) 174, 543, 980, 1087, 1717
HpySE526I ACGT 1 cut(s) 222
Hsp92II CATG 7 cut(s) 257, 702, 1187, 1323, 1568, 1933, 2150
HspAI GCGC 1 cut(s) 1094
Ksp22I TGATCA 2 cut(s) 39, 1047
LguI GCTCTTC 1 cut(s) 2145
LmnI GCTCC 6 cut(s) 502, 961, 1387, 1685, 1894, 2039
Lsp1109I GCAGC 3 cut(s) 601, 1139, 1501
LweI GCATC 8 cut(s) 514, 524, 664, 943, 1150, 1224, 1561, 2038
MabI ACCWGGT 2 cut(s) 1465, 1761
MaeI CTAG 7 cut(s) 162, 338, 1413, 1520, 1575, 1926, 2138
MaeII ACGT 1 cut(s) 222
MaeIII GTNAC 5 cut(s) 88, 1168, 1355, 1559, 2161
MboII GAAGA 7 cut(s) 325, 763, 1049, 1308, 1580, 1760, 2162
MflI RGATCY 3 cut(s) 823, 1282, 1918
MhlI GDGCHC 1 cut(s) 109
MnlI CCTC 9 cut(s) 46, 169, 206, 493, 814, 914, 1084, 1296, 2115
MseI TTAA 7 cut(s) 195, 450, 636, 1490, 1587, 1851, 1953
MslI CAYNNNNRTG 7 cut(s) 1005, 1067, 1116, 1318, 1324, 1569, 1628
MspA1I CMGCKG 2 cut(s) 774, 917
MspI CCGG 2 cut(s) 185, 417
MspR9I CCNGG 8 cut(s) 417, 1377, 1467, 1505, 1611, 1763, 1943, 1948
MvaI CCWGG 7 cut(s) 1377, 1467, 1505, 1611, 1763, 1943, 1948
MwoI GCNNNNNNNGC 7 cut(s) 136, 623, 1012, 1136, 2016, 2025, 2048
NciI CCSGG 1 cut(s) 417
NdeI CATATG 2 cut(s) 94, 580
NheI GCTAGC 2 cut(s) 1574, 1925
NlaIII CATG 7 cut(s) 257, 702, 1187, 1323, 1568, 1933, 2150
NlaIV GGNNCC 6 cut(s) 528, 782, 898, 998, 1905, 2041
NmuCI GTSAC 3 cut(s) 88, 1168, 2161
NspI RCATGY 2 cut(s) 702, 1187
OliI CACNNNNGTG 2 cut(s) 1005, 1067
PagI TCATGA 1 cut(s) 253
PaqCI CACCTGC 1 cut(s) 1011
PceI AGGCCT 1 cut(s) 1946
PciI ACATGT 1 cut(s) 1183
PciSI GCTCTTC 1 cut(s) 2145
PcsI WCGNNNNNNNCGW 1 cut(s) 567
PfeI GAWTC 1 cut(s) 789
PflMI CCANNNNNTGG 1 cut(s) 2003
PfoI TCCNGGA 1 cut(s) 415
PkrI GCNGC 4 cut(s) 129, 616, 1129, 1516
PpuMI RGGWCCY 1 cut(s) 1904
PscI ACATGT 1 cut(s) 1183
PshBI ATTAAT 1 cut(s) 195
PsiI TTATAA 1 cut(s) 692
Psp5II RGGWCCY 1 cut(s) 1904
Psp6I CCWGG 7 cut(s) 1375, 1465, 1503, 1609, 1761, 1941, 1946
PspEI GGTNACC 2 cut(s) 1559, 2161
PspGI CCWGG 7 cut(s) 1375, 1465, 1503, 1609, 1761, 1941, 1946
PspN4I GGNNCC 6 cut(s) 528, 782, 898, 998, 1905, 2041
PspPI GGNCC 9 cut(s) 356, 527, 897, 923, 997, 1664, 1755, 1904, 1939
PspPPI RGGWCCY 1 cut(s) 1904
PstI CTGCAG 1 cut(s) 619
PstNI CAGNNNCTG 1 cut(s) 623
PsuI RGATCY 3 cut(s) 823, 1282, 1918
PvuII CAGCTG 1 cut(s) 917
RseI CAYNNNNRTG 7 cut(s) 1005, 1067, 1116, 1318, 1324, 1569, 1628
SapI GCTCTTC 1 cut(s) 2145
SaqAI TTAA 7 cut(s) 195, 450, 636, 1490, 1587, 1851, 1953
SatI GCNGC 4 cut(s) 128, 615, 1128, 1515
Sau96I GGNCC 9 cut(s) 356, 527, 897, 923, 997, 1664, 1755, 1904, 1939
ScaI AGTACT 1 cut(s) 275
ScrFI CCNGG 8 cut(s) 417, 1377, 1467, 1505, 1611, 1763, 1943, 1948
SduI GDGCHC 1 cut(s) 109
SexAI ACCWGGT 2 cut(s) 1465, 1761
SfaNI GCATC 8 cut(s) 514, 524, 664, 943, 1150, 1224, 1561, 2038
SfcI CTRYAG 5 cut(s) 615, 960, 1542, 1830, 2032
SinI GGWCC 4 cut(s) 897, 1664, 1755, 1904
SmiMI CAYNNNNRTG 7 cut(s) 1005, 1067, 1116, 1318, 1324, 1569, 1628
SmlI CTYRAG 1 cut(s) 1065
SmoI CTYRAG 1 cut(s) 1065
SpeI ACTAGT 1 cut(s) 1412
SseBI AGGCCT 1 cut(s) 1946
SsiI CCGC 7 cut(s) 127, 130, 349, 591, 774, 1251, 2019
SspI AATATT 1 cut(s) 1495
SspMI CTAG 7 cut(s) 162, 338, 1413, 1520, 1575, 1926, 2138
StuI AGGCCT 1 cut(s) 1946
StyD4I CCNGG 8 cut(s) 415, 1375, 1465, 1503, 1609, 1761, 1941, 1946
StyI CCWWGG 5 cut(s) 204, 650, 784, 1254, 1786
TaiI ACGT 1 cut(s) 225
TaqI TCGA 2 cut(s) 570, 1674
TatI WGTACW 2 cut(s) 273, 1651
TauI GCSGC 1 cut(s) 130
TfiI GAWTC 1 cut(s) 789
Tru1I TTAA 7 cut(s) 195, 450, 636, 1490, 1587, 1851, 1953
Tru9I TTAA 7 cut(s) 195, 450, 636, 1490, 1587, 1851, 1953
TscAI CASTG 6 cut(s) 91, 114, 324, 1037, 1311, 1827
TseFI GTSAC 3 cut(s) 88, 1168, 2161
TseI GCWGC 3 cut(s) 614, 1127, 1514
Tsp45I GTSAC 3 cut(s) 88, 1168, 2161
TspGWI ACGGA 3 cut(s) 419, 576, 1194
TspRI CASTG 6 cut(s) 91, 114, 324, 1037, 1311, 1827
Van91I CCANNNNNTGG 1 cut(s) 2003
VpaK11BI GGWCC 4 cut(s) 897, 1664, 1755, 1904
VspI ATTAAT 1 cut(s) 195
XagI CCTNNNNNAGG 2 cut(s) 264, 1470
XapI RAATTY 5 cut(s) 76, 420, 733, 1692, 2174
XceI RCATGY 2 cut(s) 702, 1187
XcmI CCANNNNNNNNNTGG 1 cut(s) 2153
XmiI GTMKAC 1 cut(s) 1982
XspI CTAG 7 cut(s) 162, 338, 1413, 1520, 1575, 1926, 2138
ZrmI AGTACT 1 cut(s) 275
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.