Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0004060

Physical Location & Seq

Genomic Coordinates Reverse (-)

12064124 .. 12070952

Gene Structure 6829 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000032207

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2433 bp

ATGGAATTTTGTAAGATTTCATCAGTCTTGATTTCTCTCGTAGCCTTATCCTTGCTCCATTCCATTTATGCACAAGACAGAATCAAAGACTTCCTGAACGGCCACAACTTTGCTCGAAGGGAGGTAGGTAACAAAGACCTGGAGTGGGATCCTGTACTAGAGCGTTATGCTACTGACTATGCCAAAAAACACATTCATGACTGCCAACTCATCCACACCGGTGGCCCATACGGTGAAAACCTTGCCTCGAGCCCTATTGAGATGTTCGGCTTAGATGCTGTGAGCATGTGGGTGTATGAGAAGAAAAATTACAATTACGAGACGAAATCTTGCGTCGGTGGCGAATGTGGGCATTATTTGCAGTGTCTGTACTCTTGTCATTTTCTTATTCATGATTTGAGCTGCTTTGCTGGCACTGGAAGACAAGTTTTCTGGGCATACTTGAAATTCACTAAGAAAAGAATGGGTGGTGTTGCATCAAGGATTAACAAGGAAGAAAAGGTTCGGGTTTGCAAGGAGAGAAGGAAGCTAATGAAGCAGTTGGTGAGGTTTAGAGGTGAATTTGCAGATGCCCAGTTGGTTTATTTGAGAGCATTAAGGAATACTGGAGCAACACTAAGACAATTTACAGAGTCTGAGTCATTGGAGCTTGAAACTACTACTTATGGCTTAGGATTGCCACCATCACCGCCACTCCCTTTGCCCCCTTGCCCTCCACCACCACCTCCTCTCAGCCCTGACTTGAGAAAGTTGGATAATGATCGGAAAGAAGAAGCTGGCCTAGAAAAAAGCAGGGAAATTATAGATGATGATGTCAATACCCCACCACCTCCTCTGGTCCCAGAGTCATCATCTTGGATTTTTGGTTCTTCTTCACCGCATTATCAGAGACATGATGAAACAGTGGAGCCACATGACGAGGAAAAGTGGGCAGAGACTAATTCGGAATTTGTGGAAGACGATCAGGAAGAGGAAACTGTTGCAAATGTTGCGAGTATGCTGCCCAAGAAACTGCAGCTCGAAGAATCGGTTGAGGATAATTCATCAACAATGAGGTGGCCATATCCTAAGGACTCTGCAGATACAACCATGGTACTATGGAAAAGCAAGAGGACCTTGGAGAGTATAGCTAAGGAGTTGGATGATTATTTTCTGAAATCTTCAGCTGGTTTAAAGGAAATTGCTATTCTTATGGAAATCAAGGGTAGGGATACAGTTCTGCTACAGAGTACTAATGAAAACAAAAGGAAGAGGTGCAATTCTGCAAAGGTCTTTAGTGCATTGTCATGGAGCCGATCTGCTAGGGCACTTCAATATTCAAGAGATGCTGTTGAGTCTAGTGGTCCTAGTGAACCTTGTAGGCCAGGAGCTCATTGCATCACTCTCAGGAAGTTATATGAAGCGGAAAAGAAACTTTACAAGGAGATTAAGGAGGAAGAGCTTACCAAACTAGAATACGAGAGGAAATCCAAATTACTGCAAAAACTAGAGGATGAAAACCAGGATTGCAGCAAGTGTGAGAAAACTCGGTTTAGTGTTGAGAGTTTGGAGGCTGACATCTTACGTCTTCAGCAGTCCATCAGCAGTACTTGTTTTTCTATGGTGAAGCTCATAGATGATGAGCTGTATCCTCAGTTGTGCACATTAATTTCCGGACTTTTGCACATATGGAGAACGATGCATGAATGCCACCAAGTTCAGAATTATGTTTCTCAGCAGTTGAATAATCTTACTGATATTCATAAGATTGACTTGAGCACCACCTATCATCGTCAAGCGGCAATTCAACTAGAGTCTGAGGTATCTTGTTGGAGCACAAGCTTTTCTGAAGCCATAAAATCGCAACAAGAATATGTCAGAACACTTTGCAGGTGGATCCAACTCATTGATAATCCTGTGGATGATCATCCACAGAGTTTGTACTCTTCTGCTGTTCGTTGCTTGTGTGACCAATGGCAGCTTGCCCTTGATAGATCACCAAGTAAGGAAGCAGCAGAGGCCATCAAGAGCCTTCTATCAGCCATCCACAGAATTTGTCTGCAGCAAGAAGAGGAGCACAATCTGCAGAAAAAATGCGAAAAACTTGAGAAAAGGCTGCAAAAGGAGTTGTATTCATTAGCTGACTTGGAGAAAAAGATGGAGCTCAGCTTCACTGACGGAGATGCATGCTCTAACTTGAGCCCTAAGCATCCTTTCACAATAAAGAGGGATAAAACTGAAGCCTTGAAGAAGCAAGTGGAAATTGGGAAAGCCAAATATCTCAACGCAGTCCAGGTCAGCAAGAACCTGATATTGGACAATCTGAAAACAAGCCTTCCCAAGGTGTTCCAAGCATTGATGGCATTTTCTGGTGCTTATGTTCAGGGCATTGAGGCTATATCTAGTGACACCAAGCCAGCAGAGAGTTCTGATGGTGAATTTCAGACCTTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF630 DUF632

Protein Analysis

811

Amino Acids

92.52

Weight (kDa)

5.93

Isoelectric Point (pI)

56.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF630	PF04783	155 - 213	1.4e-20	Protein of unknown function (DUF630)
DUF632	PF04782	373 - 676	7.4e-85	Protein of unknown function (DUF632)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004060)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G34670 AT2G34670
fragaria_vesca	FvH4_3g09830
malus_domestica	MD05G1275400.v1.1 MD10G1254900.v1.1
prunus_persica	Prupe.4G088700_v2.0.a1 Prupe.4G088700_v2.0.a1 Prupe.4G088700_v2.0.a1 Prupe.4G088700_v2.0.a1 Prupe.4G088700_v2.0.a1 Prupe.4G088700_v2.0.a1 Prupe.4G088700_v2.0.a1 Prupe.4G088700_v2.0.a1 Prupe.4G088700_v2.0.a1 Prupe.4G088700_v2.0.a1
pyrus_communis	pycom05g25660 pycom10g21030 pycom10g21040
rosa_chinensis	RchiOBHm_Chr5g0015541
rosa_laevigata	RLG00000032207
rosa_multiflora	Rmu_sc0003064.1_g000007
rosa_roxburghii	Rroxscaffold_1G00060970
rosa_rugosa	Rorug05G0028100 Rorug05G0028200 Rorug05G0028300 Rorug05G0028300 Rorug05G0028300 Rorug05G0028300
rosa_samantha	Rh5AG121600 Rh5BG120400 Rh5CG130700 Rh5DG119300
rosa_wichuraiana	Rw5G010490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1860
Acc36I	ACCTGC	1 cut(s)	1860
AccIII	TCCGGA	1 cut(s)	1652
AciI	CCGC	4 cut(s)	689, 878, 1403, 1778
AclWI	GGATC	4 cut(s)	143, 156, 1870, 1883
AcoI	YGGCCR	2 cut(s)	100, 1058
AcsI	RAATTY	6 cut(s)	5, 446, 560, 947, 2031, 2417
AcuI	CTGAAG	4 cut(s)	1146, 1553, 1848, 2238
AfaI	GTAC	6 cut(s)	156, 371, 1095, 1231, 1588, 1922
AfiI	CCNNNNNNNGG	3 cut(s)	145, 2293, 2320
AgeI	ACCGGT	1 cut(s)	218
AgsI	TTSAA	7 cut(s)	445, 653, 1313, 1320, 1723, 1787, 2227
AjnI	CCWGG	4 cut(s)	138, 1363, 1500, 2271
AjuI	GAANNNNNNNTTGG	2 cut(s)	2276, 2308
AleI	CACNNNNGTG	1 cut(s)	219
AloI	GAACNNNNNNTCC	2 cut(s)	850, 882
Alw21I	GWGCWC	6 cut(s)	1372, 1643, 1760, 1817, 2058, 2145
Alw26I	GTCTC	3 cut(s)	314, 883, 929
Alw44I	GTGCAC	1 cut(s)	1639
AlwI	GGATC	4 cut(s)	143, 156, 1870, 1883
AlwNI	CAGNNNCTG	2 cut(s)	367, 635
Ama87I	CYCGRG	1 cut(s)	247
Aor13HI	TCCGGA	1 cut(s)	1652
AoxI	GGCC	6 cut(s)	100, 223, 778, 1058, 1361, 1998
ApaLI	GTGCAC	1 cut(s)	1639
ApeKI	GCWGC	8 cut(s)	402, 1000, 1015, 1509, 1957, 1991, 2041, 2095
ApoI	RAATTY	6 cut(s)	5, 446, 560, 947, 2031, 2417
AseI	ATTAAT	1 cut(s)	1646
AsiGI	ACCGGT	1 cut(s)	218
Asp700I	GAANNNNTTC	1 cut(s)	501
AspS9I	GGNCC	4 cut(s)	224, 838, 1113, 1343
AsuHPI	GGTGA	8 cut(s)	245, 556, 569, 678, 867, 1615, 1968, 2426
AvaI	CYCGRG	1 cut(s)	247
AvaII	GGWCC	3 cut(s)	838, 1113, 1343
AxyI	CCTNAGG	1 cut(s)	1068
BaeGI	GKGCMC	2 cut(s)	1309, 1643
BalI	TGGCCA	1 cut(s)	1060
BamHI	GGATCC	2 cut(s)	148, 1875
BanII	GRGCYC	4 cut(s)	254, 1372, 2145, 2183
BarI	GAAGNNNNNNTAC	2 cut(s)	293, 325
BbsI	GAAGAC	3 cut(s)	427, 963, 1559
Bbv12I	GWGCWC	6 cut(s)	1372, 1643, 1760, 1817, 2058, 2145
BbvI	GCAGC	8 cut(s)	389, 987, 1027, 1521, 1969, 2003, 2053, 2082
BccI	CCATC	7 cut(s)	691, 1586, 2009, 2030, 2131, 2332, 2405
BceAI	ACGGC	1 cut(s)	115
BcgI	CGANNNNNNTGC	2 cut(s)	982, 1016
BciT130I	CCWGG	4 cut(s)	140, 1365, 1502, 2273
BciVI	GTATCC	2 cut(s)	1204, 1638
BclI	TGATCA	1 cut(s)	1903
BcoDI	GTCTC	3 cut(s)	314, 883, 929
BfaI	CTAG	9 cut(s)	158, 782, 1302, 1338, 1347, 1451, 1487, 1790, 2382
BfmI	CTRYAG	5 cut(s)	1013, 1077, 1223, 2039, 2063
BfuAI	ACCTGC	1 cut(s)	1860
BfuI	GTATCC	2 cut(s)	1204, 1638
BisI	GCNGC	9 cut(s)	403, 1001, 1016, 1510, 1779, 1958, 1992, 2042, 2096
BlpI	GCTNAGC	1 cut(s)	2144
BlsI	GCNGC	9 cut(s)	404, 1002, 1017, 1511, 1780, 1959, 1993, 2043, 2097
BmcAI	AGTACT	2 cut(s)	1231, 1588
Bme1390I	CCNGG	4 cut(s)	140, 1365, 1502, 2273
Bme18I	GGWCC	3 cut(s)	838, 1113, 1343
BmeT110I	CYCGRG	1 cut(s)	247
BmgT120I	GGNCC	4 cut(s)	224, 838, 1113, 1343
BmiI	GGNNCC	5 cut(s)	150, 840, 909, 1292, 1877
BmrFI	CCNGG	4 cut(s)	140, 1365, 1502, 2273
BmrI	ACTGGG	1 cut(s)	568
BmsI	GCATC	8 cut(s)	265, 485, 559, 1315, 1386, 1668, 2152, 2197
BmuI	ACTGGG	1 cut(s)	568
BpiI	GAAGAC	3 cut(s)	427, 963, 1559
BpmI	CTGGAG	2 cut(s)	161, 627
Bpu10I	CCTNAGC	3 cut(s)	670, 1131, 2184
Bpu1102I	GCTNAGC	1 cut(s)	2144
BpuEI	CTTGAG	4 cut(s)	763, 1774, 2105, 2197
BsaBI	GATNNNNATC	2 cut(s)	759, 1905
BsaJI	CCNNGG	3 cut(s)	1089, 1116, 2319
BsaWI	WCCGGW	2 cut(s)	218, 1652
BsaXI	ACNNNNNCTCC	2 cut(s)	678, 708
Bsc4I	CCNNNNNNNGG	3 cut(s)	145, 2293, 2320
Bse118I	RCCGGY	1 cut(s)	218
Bse1I	ACTGG	3 cut(s)	421, 574, 610
Bse21I	CCTNAGG	1 cut(s)	1068
Bse3DI	GCAATG	1 cut(s)	1372
Bse8I	GATNNNNATC	2 cut(s)	759, 1905
BseAI	TCCGGA	1 cut(s)	1652
BseBI	CCWGG	4 cut(s)	140, 1365, 1502, 2273
BseDI	CCNNGG	3 cut(s)	1089, 1116, 2319
BseGI	GGATG	7 cut(s)	210, 1147, 1498, 1906, 1906, 2022, 2188
BseJI	GATNNNNATC	2 cut(s)	759, 1905
BseLI	CCNNNNNNNGG	3 cut(s)	145, 2293, 2320
BseMI	GCAATG	1 cut(s)	1372
BseMII	CTCAG	7 cut(s)	627, 745, 1399, 1646, 1727, 1788, 2158
BseNI	ACTGG	3 cut(s)	421, 574, 610
BseRI	GAGGAG	3 cut(s)	717, 822, 2066
BseSI	GKGCMC	2 cut(s)	1309, 1643
BseXI	GCAGC	8 cut(s)	389, 987, 1027, 1521, 1969, 2003, 2053, 2082
BshFI	GGCC	6 cut(s)	102, 225, 780, 1060, 1363, 2000
BshTI	ACCGGT	1 cut(s)	218
BsiHKAI	GWGCWC	6 cut(s)	1372, 1643, 1760, 1817, 2058, 2145
BsiHKCI	CYCGRG	1 cut(s)	247
BsiSI	CCGG	2 cut(s)	219, 1653
BslFI	GGGAC	1 cut(s)	824
BslI	CCNNNNNNNGG	3 cut(s)	145, 2293, 2320
BsmAI	GTCTC	3 cut(s)	314, 883, 929
BsmBI	CGTCTC	1 cut(s)	314
BsmFI	GGGAC	1 cut(s)	824
BsmI	GAATGC	1 cut(s)	1691
BsnI	GGCC	6 cut(s)	102, 225, 780, 1060, 1363, 2000
BsoBI	CYCGRG	1 cut(s)	247
Bsp1286I	GDGCHC	9 cut(s)	254, 1309, 1372, 1643, 1760, 1817, 2058, 2145, 2183
Bsp13I	TCCGGA	1 cut(s)	1652
Bsp143I	GATC	7 cut(s)	148, 760, 961, 1295, 1875, 1903, 1973
Bsp1720I	GCTNAGC	1 cut(s)	2144
Bsp19I	CCATGG	1 cut(s)	1089
BspACI	CCGC	4 cut(s)	689, 878, 1403, 1778
BspANI	GGCC	6 cut(s)	102, 225, 780, 1060, 1363, 2000
BspCNI	CTCAG	7 cut(s)	628, 744, 1398, 1645, 1726, 1789, 2157
BspEI	TCCGGA	1 cut(s)	1652
BspHI	TCATGA	2 cut(s)	196, 391
BspLI	GGNNCC	5 cut(s)	150, 840, 909, 1292, 1877
BspMAI	CTGCAG	4 cut(s)	1017, 1081, 2043, 2067
BspMI	ACCTGC	1 cut(s)	1860
BspPI	GGATC	4 cut(s)	143, 156, 1870, 1883
BspQI	GCTCTTC	1 cut(s)	1431
BsrDI	GCAATG	1 cut(s)	1372
BsrFI	RCCGGY	1 cut(s)	218
BsrI	ACTGG	3 cut(s)	421, 574, 610
BssAI	RCCGGY	1 cut(s)	218
BssECI	CCNNGG	3 cut(s)	1089, 1116, 2319
BssMI	GATC	7 cut(s)	148, 760, 961, 1295, 1875, 1903, 1973
BssT1I	CCWWGG	3 cut(s)	1089, 1116, 2319
Bst2UI	CCWGG	4 cut(s)	140, 1365, 1502, 2273
Bst4CI	ACNGT	4 cut(s)	233, 904, 979, 1216
Bst6I	CTCTTC	5 cut(s)	963, 1244, 1431, 1930, 2043
BstAPI	GCANNNNNTGC	3 cut(s)	358, 989, 2062
BstC8I	GCNNGC	5 cut(s)	412, 778, 1962, 2167, 2397
BstDSI	CCRYGG	1 cut(s)	1089
BstENI	CCTNNNNNAGG	1 cut(s)	2318
BstF5I	GGATG	7 cut(s)	210, 1147, 1498, 1906, 1906, 2022, 2188
BstKTI	GATC	7 cut(s)	151, 763, 964, 1298, 1878, 1906, 1976
BstMAI	GTCTC	3 cut(s)	314, 883, 929
BstMBI	GATC	7 cut(s)	148, 760, 961, 1295, 1875, 1903, 1973
BstMWI	GCNNNNNNNGC	8 cut(s)	339, 358, 411, 535, 989, 1997, 2062, 2339
BstNI	CCWGG	4 cut(s)	140, 1365, 1502, 2273
BstNSI	RCATGY	2 cut(s)	289, 2169
BstSCI	CCNGG	4 cut(s)	138, 1363, 1500, 2271
BstSFI	CTRYAG	5 cut(s)	1013, 1077, 1223, 2039, 2063
BstSLI	GKGCMC	2 cut(s)	1309, 1643
BstV1I	GCAGC	8 cut(s)	389, 987, 1027, 1521, 1969, 2003, 2053, 2082
BstV2I	GAAGAC	3 cut(s)	427, 963, 1559
BstX2I	RGATCY	2 cut(s)	148, 1875
BstXI	CCANNNNNNTGG	1 cut(s)	221
BstYI	RGATCY	2 cut(s)	148, 1875
Bsu36I	CCTNAGG	1 cut(s)	1068
BsuI	GTATCC	2 cut(s)	1204, 1638
BsuRI	GGCC	6 cut(s)	102, 225, 780, 1060, 1363, 2000
BtgI	CCRYGG	1 cut(s)	1089
BtsCI	GGATG	7 cut(s)	210, 1147, 1498, 1906, 1906, 2022, 2188
BtsI	GCAGTG	1 cut(s)	368
BtsIMutI	CAGTG	4 cut(s)	368, 414, 909, 2151
BveI	ACCTGC	1 cut(s)	1860
Cac8I	GCNNGC	5 cut(s)	412, 778, 1962, 2167, 2397
CaiI	CAGNNNCTG	2 cut(s)	367, 635
CciI	TCATGA	2 cut(s)	196, 391
Cfr10I	RCCGGY	1 cut(s)	218
Cfr13I	GGNCC	4 cut(s)	224, 838, 1113, 1343
CseI	GACGC	1 cut(s)	322
Csp6I	GTAC	6 cut(s)	155, 370, 1094, 1230, 1587, 1921
CspAI	ACCGGT	1 cut(s)	218
CspCI	CAANNNNNGTGG	6 cut(s)	681, 716, 1899, 1934, 2015, 2050
CviAII	CATG	9 cut(s)	197, 286, 392, 893, 914, 1090, 1287, 1682, 2166
CviQI	GTAC	6 cut(s)	155, 370, 1094, 1230, 1587, 1921
DpnI	GATC	7 cut(s)	150, 762, 963, 1297, 1877, 1905, 1975
DpnII	GATC	7 cut(s)	148, 760, 961, 1295, 1875, 1903, 1973
DraI	TTTAAA	1 cut(s)	1173
EaeI	YGGCCR	2 cut(s)	100, 1058
Eam1104I	CTCTTC	5 cut(s)	963, 1244, 1431, 1930, 2043
EarI	CTCTTC	5 cut(s)	963, 1244, 1431, 1930, 2043
Ecl136II	GAGCTC	2 cut(s)	1370, 2143
Eco130I	CCWWGG	3 cut(s)	1089, 1116, 2319
Eco24I	GRGCYC	4 cut(s)	254, 1372, 2145, 2183
Eco47I	GGWCC	3 cut(s)	838, 1113, 1343
Eco53kI	GAGCTC	2 cut(s)	1370, 2143
Eco57I	CTGAAG	4 cut(s)	1146, 1553, 1848, 2238
Eco81I	CCTNAGG	1 cut(s)	1068
Eco88I	CYCGRG	1 cut(s)	247
EcoICRI	GAGCTC	2 cut(s)	1370, 2143
EcoNI	CCTNNNNNAGG	1 cut(s)	2318
EcoO109I	RGGNCCY	1 cut(s)	1113
EcoRII	CCWGG	4 cut(s)	138, 1363, 1500, 2271
EcoT14I	CCWWGG	3 cut(s)	1089, 1116, 2319
EcoT22I	ATGCAT	2 cut(s)	1683, 2167
EcoT38I	GRGCYC	4 cut(s)	254, 1372, 2145, 2183
ErhI	CCWWGG	3 cut(s)	1089, 1116, 2319
Esp3I	CGTCTC	1 cut(s)	314
FaeI	CATG	9 cut(s)	200, 289, 395, 896, 917, 1093, 1290, 1685, 2169
FalI	AAGNNNNNCTT	4 cut(s)	1100, 1132, 1736, 1768
FaqI	GGGAC	1 cut(s)	824
FatI	CATG	9 cut(s)	196, 285, 391, 892, 913, 1089, 1286, 1681, 2165
FauNDI	CATATG	1 cut(s)	1667
FbaI	TGATCA	1 cut(s)	1903
Fnu4HI	GCNGC	9 cut(s)	403, 1001, 1016, 1510, 1779, 1958, 1992, 2042, 2096
FokI	GGATG	7 cut(s)	197, 1154, 1505, 1893, 1913, 2009, 2175
FriOI	GRGCYC	4 cut(s)	254, 1372, 2145, 2183
Fsp4HI	GCNGC	9 cut(s)	403, 1001, 1016, 1510, 1779, 1958, 1992, 2042, 2096
FspBI	CTAG	9 cut(s)	158, 782, 1302, 1338, 1347, 1451, 1487, 1790, 2382
GluI	GCNGC	9 cut(s)	403, 1001, 1016, 1510, 1779, 1958, 1992, 2042, 2096
GsuI	CTGGAG	2 cut(s)	161, 627
HaeIII	GGCC	6 cut(s)	102, 225, 780, 1060, 1363, 2000
HapII	CCGG	2 cut(s)	219, 1653
HgaI	GACGC	1 cut(s)	322
Hin1II	CATG	9 cut(s)	200, 289, 395, 896, 917, 1093, 1290, 1685, 2169
HindIII	AAGCTT	1 cut(s)	1819
HinfI	GANTC	8 cut(s)	81, 632, 638, 845, 1025, 1073, 1334, 1793
HpaII	CCGG	2 cut(s)	219, 1653
HphI	GGTGA	8 cut(s)	245, 556, 569, 678, 867, 1615, 1968, 2426
Hpy166II	GTNNAC	2 cut(s)	1352, 1641
Hpy188III	TCNNGA	9 cut(s)	28, 94, 197, 392, 965, 1320, 1387, 1653, 2005
Hpy8I	GTNNAC	2 cut(s)	1352, 1641
Hpy99I	CGWCG	1 cut(s)	338
HpyAV	CCTTC	4 cut(s)	111, 516, 2021, 2324
HpyCH4III	ACNGT	4 cut(s)	233, 904, 979, 1216
HpyCH4IV	ACGT	1 cut(s)	1564
HpyF10VI	GCNNNNNNNGC	8 cut(s)	339, 358, 411, 535, 989, 1997, 2062, 2339
HpySE526I	ACGT	1 cut(s)	1564
Hsp92II	CATG	9 cut(s)	200, 289, 395, 896, 917, 1093, 1290, 1685, 2169
Kpn2I	TCCGGA	1 cut(s)	1652
Ksp22I	TGATCA	1 cut(s)	1903
Kzo9I	GATC	7 cut(s)	148, 760, 961, 1295, 1875, 1903, 1973
LguI	GCTCTTC	1 cut(s)	1431
LmnI	GCTCC	9 cut(s)	60, 608, 646, 907, 1290, 1367, 1812, 2053, 2140
Lsp1109I	GCAGC	8 cut(s)	389, 987, 1027, 1521, 1969, 2003, 2053, 2082
LweI	GCATC	8 cut(s)	265, 485, 559, 1315, 1386, 1668, 2152, 2197
MaeI	CTAG	9 cut(s)	158, 782, 1302, 1338, 1347, 1451, 1487, 1790, 2382
MaeII	ACGT	1 cut(s)	1564
MaeIII	GTNAC	3 cut(s)	128, 1946, 2384
MalI	GATC	7 cut(s)	150, 762, 963, 1297, 1877, 1905, 1975
MboI	GATC	7 cut(s)	148, 760, 961, 1295, 1875, 1903, 1973
MflI	RGATCY	2 cut(s)	148, 1875
MhlI	GDGCHC	9 cut(s)	254, 1309, 1372, 1643, 1760, 1817, 2058, 2145, 2183
MlsI	TGGCCA	1 cut(s)	1060
MluNI	TGGCCA	1 cut(s)	1060
MlyI	GAGTC	6 cut(s)	641, 647, 854, 1067, 1343, 1802
MmeI	TCCRAC	4 cut(s)	732, 1119, 1790, 1903
Mox20I	TGGCCA	1 cut(s)	1060
Mph1103I	ATGCAT	2 cut(s)	1683, 2167
MroI	TCCGGA	1 cut(s)	1652
MroXI	GAANNNNTTC	1 cut(s)	501
MscI	TGGCCA	1 cut(s)	1060
MseI	TTAA	5 cut(s)	486, 596, 1172, 1428, 1646
MslI	CAYNNNNRTG	4 cut(s)	195, 219, 290, 1285
Msp20I	TGGCCA	1 cut(s)	1060
MspA1I	CMGCKG	1 cut(s)	1166
MspI	CCGG	2 cut(s)	219, 1653
MspR9I	CCNGG	4 cut(s)	140, 1365, 1502, 2273
Mva1269I	GAATGC	1 cut(s)	1691
MvaI	CCWGG	4 cut(s)	140, 1365, 1502, 2273
MwoI	GCNNNNNNNGC	8 cut(s)	339, 358, 411, 535, 989, 1997, 2062, 2339
NcoI	CCATGG	1 cut(s)	1089
NdeI	CATATG	1 cut(s)	1667
NdeII	GATC	7 cut(s)	148, 760, 961, 1295, 1875, 1903, 1973
NlaIII	CATG	9 cut(s)	200, 289, 395, 896, 917, 1093, 1290, 1685, 2169
NlaIV	GGNNCC	5 cut(s)	150, 840, 909, 1292, 1877
NmuCI	GTSAC	2 cut(s)	1946, 2384
NsiI	ATGCAT	2 cut(s)	1683, 2167
NspI	RCATGY	2 cut(s)	289, 2169
OliI	CACNNNNGTG	1 cut(s)	219
PaeI	GCATGC	1 cut(s)	2169
PaeR7I	CTCGAG	1 cut(s)	247
PagI	TCATGA	2 cut(s)	196, 391
PaqCI	CACCTGC	1 cut(s)	1860
PciSI	GCTCTTC	1 cut(s)	1431
PctI	GAATGC	1 cut(s)	1691
PdmI	GAANNNNTTC	1 cut(s)	501
PfeI	GAWTC	2 cut(s)	81, 1025
PinAI	ACCGGT	1 cut(s)	218
PkrI	GCNGC	9 cut(s)	404, 1002, 1017, 1511, 1780, 1959, 1993, 2043, 2097
PleI	GAGTC	6 cut(s)	640, 646, 853, 1067, 1342, 1801
PpsI	GAGTC	6 cut(s)	640, 646, 853, 1067, 1342, 1801
PpuMI	RGGWCCY	1 cut(s)	1113
PshBI	ATTAAT	1 cut(s)	1646
Psp124BI	GAGCTC	2 cut(s)	1372, 2145
Psp5II	RGGWCCY	1 cut(s)	1113
Psp6I	CCWGG	4 cut(s)	138, 1363, 1500, 2271
PspGI	CCWGG	4 cut(s)	138, 1363, 1500, 2271
PspN4I	GGNNCC	5 cut(s)	150, 840, 909, 1292, 1877
PspPI	GGNCC	4 cut(s)	224, 838, 1113, 1343
PspPPI	RGGWCCY	1 cut(s)	1113
PspXI	VCTCGAGB	1 cut(s)	247
PstI	CTGCAG	4 cut(s)	1017, 1081, 2043, 2067
PstNI	CAGNNNCTG	2 cut(s)	367, 635
PsuI	RGATCY	2 cut(s)	148, 1875
PvuII	CAGCTG	1 cut(s)	1166
RsaI	GTAC	6 cut(s)	156, 371, 1095, 1231, 1588, 1922
RsaNI	GTAC	6 cut(s)	155, 370, 1094, 1230, 1587, 1921
RseI	CAYNNNNRTG	4 cut(s)	195, 219, 290, 1285
SacI	GAGCTC	2 cut(s)	1372, 2145
SapI	GCTCTTC	1 cut(s)	1431
SaqAI	TTAA	5 cut(s)	486, 596, 1172, 1428, 1646
SatI	GCNGC	9 cut(s)	403, 1001, 1016, 1510, 1779, 1958, 1992, 2042, 2096
Sau3AI	GATC	7 cut(s)	148, 760, 961, 1295, 1875, 1903, 1973
Sau96I	GGNCC	4 cut(s)	224, 838, 1113, 1343
ScaI	AGTACT	2 cut(s)	1231, 1588
SchI	GAGTC	6 cut(s)	641, 647, 854, 1067, 1343, 1802
ScrFI	CCNGG	4 cut(s)	140, 1365, 1502, 2273
SduI	GDGCHC	9 cut(s)	254, 1309, 1372, 1643, 1760, 1817, 2058, 2145, 2183
SfaNI	GCATC	8 cut(s)	265, 485, 559, 1315, 1386, 1668, 2152, 2197
SfcI	CTRYAG	5 cut(s)	1013, 1077, 1223, 2039, 2063
Sfr274I	CTCGAG	1 cut(s)	247
SgrAI	CRCCGGYG	1 cut(s)	218
SinI	GGWCC	3 cut(s)	838, 1113, 1343
SlaI	CTCGAG	1 cut(s)	247
SmiMI	CAYNNNNRTG	4 cut(s)	195, 219, 290, 1285
SmlI	CTYRAG	5 cut(s)	247, 742, 1753, 2084, 2176
SmoI	CTYRAG	5 cut(s)	247, 742, 1753, 2084, 2176
SphI	GCATGC	1 cut(s)	2169
SsiI	CCGC	4 cut(s)	689, 878, 1403, 1778
SspI	AATATT	1 cut(s)	1316
SspMI	CTAG	9 cut(s)	158, 782, 1302, 1338, 1347, 1451, 1487, 1790, 2382
SstI	GAGCTC	2 cut(s)	1372, 2145
StyD4I	CCNGG	4 cut(s)	138, 1363, 1500, 2271
StyI	CCWWGG	3 cut(s)	1089, 1116, 2319
TaaI	ACNGT	4 cut(s)	233, 904, 979, 1216
TaiI	ACGT	1 cut(s)	1567
TaqI	TCGA	3 cut(s)	115, 248, 1020
TatI	WGTACW	5 cut(s)	154, 369, 1229, 1586, 1920
TauI	GCSGC	1 cut(s)	1781
TfiI	GAWTC	2 cut(s)	81, 1025
Tru1I	TTAA	5 cut(s)	486, 596, 1172, 1428, 1646
Tru9I	TTAA	5 cut(s)	486, 596, 1172, 1428, 1646
TscAI	CASTG	4 cut(s)	368, 421, 909, 2158
TseFI	GTSAC	2 cut(s)	1946, 2384
TseI	GCWGC	8 cut(s)	402, 1000, 1015, 1509, 1957, 1991, 2041, 2095
Tsp45I	GTSAC	2 cut(s)	1946, 2384
TspGWI	ACGGA	1 cut(s)	2172
TspRI	CASTG	4 cut(s)	368, 421, 909, 2158
VneI	GTGCAC	1 cut(s)	1639
VpaK11BI	GGWCC	3 cut(s)	838, 1113, 1343
VspI	ATTAAT	1 cut(s)	1646
XagI	CCTNNNNNAGG	1 cut(s)	2318
XapI	RAATTY	6 cut(s)	5, 446, 560, 947, 2031, 2417
XceI	RCATGY	2 cut(s)	289, 2169
XhoI	CTCGAG	1 cut(s)	247
XmnI	GAANNNNTTC	1 cut(s)	501
XspI	CTAG	9 cut(s)	158, 782, 1302, 1338, 1347, 1451, 1487, 1790, 2382
ZrmI	AGTACT	2 cut(s)	1231, 1588
Zsp2I	ATGCAT	2 cut(s)	1683, 2167

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.