Rh5AG121600

Protein of unknown function (DUF632)

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
Physical Location & Seq
Reverse (-)
11356056 .. 11362263
6208 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG121600.1

Sequence Viewer

Length: 1518 bp
ATGGGTGGTGTTGCATCAAGGATTAACAAGGAAGAAAAGGTTCGGGTTTGCAAGGAGAGAAGGAAGCTAATGAAGCAGTTGGTGAGGTTTAGAGGTGAATTTGCAGATGCCCAGTTGGTTTATTTGAGAGCATTAAGGAATACTGGAGCAACACTAAGACAATTTACAGAGTCTGAGTCATTGGAGCTTGAAACTACTACTTATGGCTTAGGATTGCCACCATCACCGCCACCCCCTTTGCCCCCTTCCCCTCCACCACCACCTCCTCTCAGCCCTGACTTGAGAAAGTTGGATAATGATCGGAAAGAAGAAGCTGGCCTAGAAAAAAGCAGGGAAATTATGGAGGATGATGTCAGTACCCCACCAGACTCATCATCTTGGGACATTTTTGGTTTGTCTTCACCGCATTATCAGAGACATGATGAAACAGTGGAGCCACAAGACGAGGAAAAGTGGGCAGAGACTAATTCGGAATTTGTGGAAGACGAACAGGAAGAGGAAACTGTTGCAAATGTTGTGAGTATGCTGCCTAAGAAACTGCAGCTCGAAGAATCGGTTGAGGATAATTCATCGACAATGAGGTGGCCATATCCTAAGGACTCTGCAGATACAACCATGGTACTATGGAAAAGCAAGAGGACCTTGGAGAGTATAGCTAAGGAGTTGGATGATTATTTTCTGAAATCTTCAGCTGGTTTAAAGGAAATTGCTATTCTTATGGAAATCAAAGGCAGGGATACAGCTCTGCTACAGAGTACTTATGAAAACAAAAGGAAGAGGTGCAATTCTGCAAAGGTCTTTAGTGCATTGTCATGGAGCCGATCTGCTAGGGCACTTCAATATTCAAGAGATGCTGTTGAGTCTAGTGGTCCTAGTGAACCTTGCAGGCCAGGAGCTCATTGCATCACTCTCAGGAAGTTATATGAAGCAGAAAATAAACTTTACAAGGAGATTAAGGAGGAAGAGCTTACCAAACTAGAATACGAGAGGAAATCCAAATTACTGCAAAAACAAGAGGATGAAAACCTGGATTGCAGCAAGAGTGAGAAAACTCGGTTTAGTGTTGAGAGTTTGGAGGCTGACATCTTACGTCTTCAGCAGTCCATCAGCAGTACTCGTTTTTCTATAGTGAAGCTCATAGATGACGAGCTGTATCCTCAGTTGTGCACATTAATTTCCGGACTTTTGCACATATGGAGAACGATGCATGAATGCCACCAAGTTCAGAATTATGTTTCTCAGCAGTTGAATAATCTTACTGATATTCATAAGATTGACTTGAGCACCACCTATCATCGCCAAGCAGCAATTCAACTAGAGTCTGAGGTATCTTGTTGGAACAACAGCTTTTCTGAAGCCATAAAATCGCAACAAGAATATGTCAGAACTCTTTGCAGGTGGATCCAACTCATTGATAATCCTGTGGATGATCATCCACAGAGTTTGTACTCTTCTGCTGTTCGTTGCTTGTGTGACCAATGGCAGCTTGCCCTTGATAGATCACCAAGTAAGGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

505

Amino Acids

58.04

Weight (kDa)

5.33

Isoelectric Point (pI)

66.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF630 PF04783 1 - 59 7.3e-21 Protein of unknown function (DUF630)
DUF632 PF04782 215 - 504 2.3e-78 Protein of unknown function (DUF632)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1386
Acc36I ACCTGC 1 cut(s) 1386
AccIII TCCGGA 1 cut(s) 1178
AciI CCGC 2 cut(s) 227, 404
AclWI GGATC 2 cut(s) 1396, 1409
AcoI YGGCCR 1 cut(s) 584
AcsI RAATTY 2 cut(s) 98, 473
AcuI CTGAAG 3 cut(s) 672, 1079, 1374
AfaI GTAC 5 cut(s) 358, 621, 757, 1114, 1448
AgsI TTSAA 5 cut(s) 191, 839, 846, 1249, 1313
AjnI CCWGG 2 cut(s) 889, 1026
AjuI GAANNNNNNNTTGG 2 cut(s) 1293, 1325
Alw21I GWGCWC 3 cut(s) 898, 1169, 1286
Alw26I GTCTC 2 cut(s) 409, 455
Alw44I GTGCAC 1 cut(s) 1165
AlwI GGATC 2 cut(s) 1396, 1409
AlwNI CAGNNNCTG 1 cut(s) 173
Aor13HI TCCGGA 1 cut(s) 1178
AoxI GGCC 3 cut(s) 316, 584, 887
ApaLI GTGCAC 1 cut(s) 1165
ApeKI GCWGC 5 cut(s) 526, 541, 1035, 1304, 1483
ApoI RAATTY 2 cut(s) 98, 473
AseI ATTAAT 1 cut(s) 1172
Asp700I GAANNNNTTC 1 cut(s) 39
AspS9I GGNCC 2 cut(s) 639, 869
AsuHPI GGTGA 5 cut(s) 94, 107, 216, 393, 1494
AvaII GGWCC 2 cut(s) 639, 869
AxyI CCTNAGG 1 cut(s) 594
BaeGI GKGCMC 2 cut(s) 835, 1169
BalI TGGCCA 1 cut(s) 586
BamHI GGATCC 1 cut(s) 1401
BanII GRGCYC 1 cut(s) 898
BbsI GAAGAC 3 cut(s) 390, 489, 1085
Bbv12I GWGCWC 3 cut(s) 898, 1169, 1286
BbvI GCAGC 5 cut(s) 513, 553, 1047, 1316, 1495
BccI CCATC 2 cut(s) 229, 1112
BciT130I CCWGG 2 cut(s) 891, 1028
BciVI GTATCC 2 cut(s) 730, 1164
BclI TGATCA 1 cut(s) 1429
BcoDI GTCTC 2 cut(s) 409, 455
BfaI CTAG 6 cut(s) 320, 828, 864, 873, 977, 1316
BfmI CTRYAG 4 cut(s) 539, 603, 749, 1125
BfuAI ACCTGC 1 cut(s) 1386
BfuI GTATCC 2 cut(s) 730, 1164
BisI GCNGC 5 cut(s) 527, 542, 1036, 1305, 1484
BlsI GCNGC 5 cut(s) 528, 543, 1037, 1306, 1485
BmcAI AGTACT 2 cut(s) 757, 1114
Bme1390I CCNGG 2 cut(s) 891, 1028
Bme18I GGWCC 2 cut(s) 639, 869
BmgT120I GGNCC 2 cut(s) 639, 869
BmiI GGNNCC 3 cut(s) 435, 818, 1403
BmrFI CCNGG 2 cut(s) 891, 1028
BmrI ACTGGG 1 cut(s) 106
BmsI GCATC 5 cut(s) 23, 97, 841, 912, 1194
BmuI ACTGGG 1 cut(s) 106
BpiI GAAGAC 3 cut(s) 390, 489, 1085
BpmI CTGGAG 1 cut(s) 165
Bpu10I CCTNAGC 2 cut(s) 208, 657
BpuEI CTTGAG 2 cut(s) 301, 1300
BsaBI GATNNNNATC 2 cut(s) 297, 1431
BsaJI CCNNGG 2 cut(s) 615, 642
BsaWI WCCGGW 1 cut(s) 1178
Bse1I ACTGG 2 cut(s) 112, 148
Bse21I CCTNAGG 1 cut(s) 594
Bse3DI GCAATG 1 cut(s) 898
Bse8I GATNNNNATC 2 cut(s) 297, 1431
BseAI TCCGGA 1 cut(s) 1178
BseBI CCWGG 2 cut(s) 891, 1028
BseDI CCNNGG 2 cut(s) 615, 642
BseGI GGATG 5 cut(s) 352, 673, 1024, 1432, 1432
BseJI GATNNNNATC 2 cut(s) 297, 1431
BseMI GCAATG 1 cut(s) 898
BseMII CTCAG 6 cut(s) 165, 283, 925, 1172, 1253, 1314
BseNI ACTGG 2 cut(s) 112, 148
BseRI GAGGAG 1 cut(s) 255
BseSI GKGCMC 2 cut(s) 835, 1169
BseXI GCAGC 5 cut(s) 513, 553, 1047, 1316, 1495
BshFI GGCC 3 cut(s) 318, 586, 889
BsiHKAI GWGCWC 3 cut(s) 898, 1169, 1286
BsiSI CCGG 1 cut(s) 1179
BslFI GGGAC 1 cut(s) 395
BsmAI GTCTC 2 cut(s) 409, 455
BsmFI GGGAC 1 cut(s) 395
BsmI GAATGC 1 cut(s) 1217
BsnI GGCC 3 cut(s) 318, 586, 889
Bsp1286I GDGCHC 4 cut(s) 835, 898, 1169, 1286
Bsp13I TCCGGA 1 cut(s) 1178
Bsp143I GATC 5 cut(s) 298, 821, 1401, 1429, 1499
Bsp19I CCATGG 1 cut(s) 615
BspACI CCGC 2 cut(s) 227, 404
BspANI GGCC 3 cut(s) 318, 586, 889
BspCNI CTCAG 6 cut(s) 166, 282, 924, 1171, 1252, 1315
BspEI TCCGGA 1 cut(s) 1178
BspLI GGNNCC 3 cut(s) 435, 818, 1403
BspMAI CTGCAG 2 cut(s) 543, 607
BspMI ACCTGC 1 cut(s) 1386
BspPI GGATC 2 cut(s) 1396, 1409
BspQI GCTCTTC 1 cut(s) 957
BsrDI GCAATG 1 cut(s) 898
BsrI ACTGG 2 cut(s) 112, 148
BssECI CCNNGG 2 cut(s) 615, 642
BssMI GATC 5 cut(s) 298, 821, 1401, 1429, 1499
BssT1I CCWWGG 2 cut(s) 615, 642
Bst2UI CCWGG 2 cut(s) 891, 1028
Bst4CI ACNGT 2 cut(s) 430, 505
Bst6I CTCTTC 4 cut(s) 489, 770, 957, 1456
BstC8I GCNNGC 3 cut(s) 316, 887, 1488
BstDSI CCRYGG 1 cut(s) 615
BstF5I GGATG 5 cut(s) 352, 673, 1024, 1432, 1432
BstKTI GATC 5 cut(s) 301, 824, 1404, 1432, 1502
BstMAI GTCTC 2 cut(s) 409, 455
BstMBI GATC 5 cut(s) 298, 821, 1401, 1429, 1499
BstMWI GCNNNNNNNGC 1 cut(s) 73
BstNI CCWGG 2 cut(s) 891, 1028
BstSCI CCNGG 2 cut(s) 889, 1026
BstSFI CTRYAG 4 cut(s) 539, 603, 749, 1125
BstSLI GKGCMC 2 cut(s) 835, 1169
BstV1I GCAGC 5 cut(s) 513, 553, 1047, 1316, 1495
BstV2I GAAGAC 3 cut(s) 390, 489, 1085
BstX2I RGATCY 1 cut(s) 1401
BstYI RGATCY 1 cut(s) 1401
Bsu36I CCTNAGG 1 cut(s) 594
BsuI GTATCC 2 cut(s) 730, 1164
BsuRI GGCC 3 cut(s) 318, 586, 889
BtgI CCRYGG 1 cut(s) 615
BtgZI GCGATG 1 cut(s) 1280
BtsCI GGATG 5 cut(s) 352, 673, 1024, 1432, 1432
BtsIMutI CAGTG 1 cut(s) 435
BveI ACCTGC 1 cut(s) 1386
Cac8I GCNNGC 3 cut(s) 316, 887, 1488
CaiI CAGNNNCTG 1 cut(s) 173
Cfr13I GGNCC 2 cut(s) 639, 869
Csp6I GTAC 5 cut(s) 357, 620, 756, 1113, 1447
CspCI CAANNNNNGTGG 4 cut(s) 219, 254, 1425, 1460
CviAII CATG 4 cut(s) 419, 616, 813, 1208
CviQI GTAC 5 cut(s) 357, 620, 756, 1113, 1447
DpnI GATC 5 cut(s) 300, 823, 1403, 1431, 1501
DpnII GATC 5 cut(s) 298, 821, 1401, 1429, 1499
DraI TTTAAA 1 cut(s) 699
EaeI YGGCCR 1 cut(s) 584
Eam1104I CTCTTC 4 cut(s) 489, 770, 957, 1456
EarI CTCTTC 4 cut(s) 489, 770, 957, 1456
Ecl136II GAGCTC 1 cut(s) 896
Eco130I CCWWGG 2 cut(s) 615, 642
Eco24I GRGCYC 1 cut(s) 898
Eco47I GGWCC 2 cut(s) 639, 869
Eco53kI GAGCTC 1 cut(s) 896
Eco57I CTGAAG 3 cut(s) 672, 1079, 1374
Eco81I CCTNAGG 1 cut(s) 594
EcoICRI GAGCTC 1 cut(s) 896
EcoO109I RGGNCCY 1 cut(s) 639
EcoRII CCWGG 2 cut(s) 889, 1026
EcoT14I CCWWGG 2 cut(s) 615, 642
EcoT22I ATGCAT 1 cut(s) 1209
EcoT38I GRGCYC 1 cut(s) 898
ErhI CCWWGG 2 cut(s) 615, 642
FaeI CATG 4 cut(s) 422, 619, 816, 1211
FalI AAGNNNNNCTT 4 cut(s) 626, 658, 1262, 1294
FaqI GGGAC 1 cut(s) 395
FatI CATG 4 cut(s) 418, 615, 812, 1207
FauNDI CATATG 1 cut(s) 1193
FbaI TGATCA 1 cut(s) 1429
Fnu4HI GCNGC 5 cut(s) 527, 542, 1036, 1305, 1484
FokI GGATG 5 cut(s) 359, 680, 1031, 1419, 1439
FriOI GRGCYC 1 cut(s) 898
Fsp4HI GCNGC 5 cut(s) 527, 542, 1036, 1305, 1484
FspBI CTAG 6 cut(s) 320, 828, 864, 873, 977, 1316
GluI GCNGC 5 cut(s) 527, 542, 1036, 1305, 1484
GsuI CTGGAG 1 cut(s) 165
HaeIII GGCC 3 cut(s) 318, 586, 889
HapII CCGG 1 cut(s) 1179
Hin1II CATG 4 cut(s) 422, 619, 816, 1211
HinfI GANTC 7 cut(s) 170, 176, 368, 551, 599, 860, 1319
HpaII CCGG 1 cut(s) 1179
HphI GGTGA 5 cut(s) 94, 107, 216, 393, 1494
Hpy166II GTNNAC 2 cut(s) 878, 1167
Hpy188I TCNGA 9 cut(s) 175, 303, 414, 472, 681, 1227, 1324, 1354, 1385
Hpy188III TCNNGA 3 cut(s) 846, 913, 1179
Hpy8I GTNNAC 2 cut(s) 878, 1167
HpyAV CCTTC 2 cut(s) 54, 255
HpyCH4III ACNGT 2 cut(s) 430, 505
HpyCH4IV ACGT 1 cut(s) 1090
HpyF10VI GCNNNNNNNGC 1 cut(s) 73
HpySE526I ACGT 1 cut(s) 1090
Hsp92II CATG 4 cut(s) 422, 619, 816, 1211
Kpn2I TCCGGA 1 cut(s) 1178
Ksp22I TGATCA 1 cut(s) 1429
Kzo9I GATC 5 cut(s) 298, 821, 1401, 1429, 1499
LguI GCTCTTC 1 cut(s) 957
LmnI GCTCC 5 cut(s) 146, 184, 433, 816, 893
Lsp1109I GCAGC 5 cut(s) 513, 553, 1047, 1316, 1495
LweI GCATC 5 cut(s) 23, 97, 841, 912, 1194
MaeI CTAG 6 cut(s) 320, 828, 864, 873, 977, 1316
MaeII ACGT 1 cut(s) 1090
MaeIII GTNAC 1 cut(s) 1472
MalI GATC 5 cut(s) 300, 823, 1403, 1431, 1501
MboI GATC 5 cut(s) 298, 821, 1401, 1429, 1499
MflI RGATCY 1 cut(s) 1401
MhlI GDGCHC 4 cut(s) 835, 898, 1169, 1286
MlsI TGGCCA 1 cut(s) 586
MluNI TGGCCA 1 cut(s) 586
MlyI GAGTC 6 cut(s) 179, 185, 362, 593, 869, 1328
MmeI TCCRAC 4 cut(s) 270, 645, 1316, 1429
Mox20I TGGCCA 1 cut(s) 586
Mph1103I ATGCAT 1 cut(s) 1209
MroI TCCGGA 1 cut(s) 1178
MroXI GAANNNNTTC 1 cut(s) 39
MscI TGGCCA 1 cut(s) 586
MseI TTAA 5 cut(s) 24, 134, 698, 954, 1172
MslI CAYNNNNRTG 1 cut(s) 811
Msp20I TGGCCA 1 cut(s) 586
MspA1I CMGCKG 1 cut(s) 692
MspI CCGG 1 cut(s) 1179
MspR9I CCNGG 2 cut(s) 891, 1028
Mva1269I GAATGC 1 cut(s) 1217
MvaI CCWGG 2 cut(s) 891, 1028
MwoI GCNNNNNNNGC 1 cut(s) 73
NcoI CCATGG 1 cut(s) 615
NdeI CATATG 1 cut(s) 1193
NdeII GATC 5 cut(s) 298, 821, 1401, 1429, 1499
NlaIII CATG 4 cut(s) 422, 619, 816, 1211
NlaIV GGNNCC 3 cut(s) 435, 818, 1403
NmuCI GTSAC 1 cut(s) 1472
NsiI ATGCAT 1 cut(s) 1209
PaqCI CACCTGC 1 cut(s) 1386
PciSI GCTCTTC 1 cut(s) 957
PctI GAATGC 1 cut(s) 1217
PdmI GAANNNNTTC 1 cut(s) 39
PfeI GAWTC 1 cut(s) 551
PkrI GCNGC 5 cut(s) 528, 543, 1037, 1306, 1485
PleI GAGTC 6 cut(s) 178, 184, 362, 593, 868, 1327
PpsI GAGTC 6 cut(s) 178, 184, 362, 593, 868, 1327
PpuMI RGGWCCY 1 cut(s) 639
PshBI ATTAAT 1 cut(s) 1172
Psp124BI GAGCTC 1 cut(s) 898
Psp5II RGGWCCY 1 cut(s) 639
Psp6I CCWGG 2 cut(s) 889, 1026
PspGI CCWGG 2 cut(s) 889, 1026
PspN4I GGNNCC 3 cut(s) 435, 818, 1403
PspPI GGNCC 2 cut(s) 639, 869
PspPPI RGGWCCY 1 cut(s) 639
PstI CTGCAG 2 cut(s) 543, 607
PstNI CAGNNNCTG 1 cut(s) 173
PsuI RGATCY 1 cut(s) 1401
PvuII CAGCTG 1 cut(s) 692
RsaI GTAC 5 cut(s) 358, 621, 757, 1114, 1448
RsaNI GTAC 5 cut(s) 357, 620, 756, 1113, 1447
RseI CAYNNNNRTG 1 cut(s) 811
SacI GAGCTC 1 cut(s) 898
SapI GCTCTTC 1 cut(s) 957
SaqAI TTAA 5 cut(s) 24, 134, 698, 954, 1172
SatI GCNGC 5 cut(s) 527, 542, 1036, 1305, 1484
Sau3AI GATC 5 cut(s) 298, 821, 1401, 1429, 1499
Sau96I GGNCC 2 cut(s) 639, 869
ScaI AGTACT 2 cut(s) 757, 1114
SchI GAGTC 6 cut(s) 179, 185, 362, 593, 869, 1328
ScrFI CCNGG 2 cut(s) 891, 1028
SduI GDGCHC 4 cut(s) 835, 898, 1169, 1286
SfaNI GCATC 5 cut(s) 23, 97, 841, 912, 1194
SfcI CTRYAG 4 cut(s) 539, 603, 749, 1125
SinI GGWCC 2 cut(s) 639, 869
SmiMI CAYNNNNRTG 1 cut(s) 811
SmlI CTYRAG 2 cut(s) 280, 1279
SmoI CTYRAG 2 cut(s) 280, 1279
SsiI CCGC 2 cut(s) 227, 404
SspI AATATT 1 cut(s) 842
SspMI CTAG 6 cut(s) 320, 828, 864, 873, 977, 1316
SstI GAGCTC 1 cut(s) 898
StyD4I CCNGG 2 cut(s) 889, 1026
StyI CCWWGG 2 cut(s) 615, 642
TaaI ACNGT 2 cut(s) 430, 505
TaiI ACGT 1 cut(s) 1093
TaqI TCGA 2 cut(s) 546, 572
TatI WGTACW 3 cut(s) 755, 1112, 1446
TfiI GAWTC 1 cut(s) 551
Tru1I TTAA 5 cut(s) 24, 134, 698, 954, 1172
Tru9I TTAA 5 cut(s) 24, 134, 698, 954, 1172
TscAI CASTG 1 cut(s) 435
TseFI GTSAC 1 cut(s) 1472
TseI GCWGC 5 cut(s) 526, 541, 1035, 1304, 1483
Tsp45I GTSAC 1 cut(s) 1472
TspDTI ATGAA 8 cut(s) 86, 438, 558, 777, 939, 1035, 1224, 1256
TspRI CASTG 1 cut(s) 435
VneI GTGCAC 1 cut(s) 1165
VpaK11BI GGWCC 2 cut(s) 639, 869
VspI ATTAAT 1 cut(s) 1172
XapI RAATTY 2 cut(s) 98, 473
XmnI GAANNNNTTC 1 cut(s) 39
XspI CTAG 6 cut(s) 320, 828, 864, 873, 977, 1316
ZrmI AGTACT 2 cut(s) 757, 1114
Zsp2I ATGCAT 1 cut(s) 1209
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.