Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0004060

Physical Location & Seq

Genomic Coordinates Forward (+)

83154302 .. 83160471

Gene Structure 6170 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00060970.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1959 bp

ATGGGTGGTGTTGCATCAAGGATTAACAAGGAAGAAAAGGTTCGGGTTTGTAAGGAGAGAAGGAAGCTAATGAAGCAGTTGGTGAGGTTTAGAGGTGAATTTGCAGATGCCCAGTTGGATTATTTGAAAGCATTAAGGAATACTGGAGCAACACTAAGACAATTTACAGAGTCTGAGTCATTGGAGCTTGAAACTACTACTTATGGCTTAGGATTGCCACCATCACCGCCACCCCCTTTGCCCCCTTCCCCTCCACCACCACCTCCTCTCAGCCCTGACTTGAGAAAGTTGGATAATGATCGGAAAGAAGAAGCTGGCCTAGATATAGAGGATGATGTCAATACCCCACCACCTCCTCTGGTCCCAGACTCATCATCTTGGGACATTTTTGGTTCATATTCACCACATTATCAGAGACATGATGAAACAGTGGAGCCACATGACGAGGAAAAGTGGGCAGAGACTAATTCGGAATTTGTGGAAGACGAACAGGAAGAGGAAACTGTTGCAAATGTTGTGAGTATGCTGCCTAAGAAACTGCAGCTCGAAGAACCGGTTGAGGATAATTCATCAACAATGAGGTGGCCATATCCAAAGGACTCTGCAGATACAACCATGGTACTATGGAAAAGCAAGAGGACCTTGGAGAGTATAGCTAAGGAGTTGGATGATTATTTTCTGAAATCTTCAGCTGGTTTAAAGGAAATTGCTATTCTTATGGAAATCAAAGGTAGGGATACAGTTCTGCTACAGAGTCCTAATGAAAACAAAAGGAAGAGGTGCAATTCTGCAAAGGTCTTTAGTGCATTGTCATGGAGCCGATCTTCTAGGGCACTTCAATATTCAAGAGATGCTGTTGAGTCTAGTGGTCCTAGTGAACCTTGCAGGCCAGGAGCTCATTGCATCACTCTCAGGAAGTTATATGAAGCGGAAAAGAAACTTTACAAGGAGATTAAGGAGGAAGAGCTTACCAAACTAGAATACAAGAGGAAATCCAAATTACTGCAAAAACAAGAGGATGAAAACCAGGATTGCAGCAAGAGTGAGAAAACTCGGTTTAGTGTTGAGAGTTTGGAGGCTGACATCTTGCGTCTTCAGCAGTCCATCAGCAATACTTGTTTTTCTATAGTGAAGCTCATAGATGACGAGCTGTATCCTCAGTTGTGCACATTAATTTCCGGACTTTTGCACATATGGAGAACGATGCATGAATGCCACCAAGTTCAGAATTATGTTTCTCAGCAGTTGAATAATCTTACCGATATTGATAAGATTGACTTGAGCACCATCTATCATCGCCAAGCAGCAATTCAACTAGAGTCTGAGGTATCTTGTTGGAACAACAGCTTTTCTGAAGCCATAAAATCGCAACAAGAATATGTCAGAACACTTTGCAGGTGGATCCAACTCATTGATAATCCTGTGGATGATCATCCACAGAGTTTGTACTCTTCTGCTGTTCGTTGCTTGTGTGACCAATGGCAGCTTGTCCTTGATAGATCACCAAGTAAGGAAGCAGCAGAGGCCATCAAGAGCCTTCTATCAGCCATCCACAGAATTTGTCTGCAGCAAGAAGAGGAGCACAATCTGCAGAAGAAATCCGAAAAACTCGAGAAGAGGCTGCAAAAGGAGTTGTATTCATTAGCTGACTTGGAGAAAAAGATGGAGCTCAGCTTCACCGATGGAGATGCGTGCTCGGACCTTGGCCCTAAGCATCCTTTCACAATAAAGAGGGATAAAACTGAAGCCTTGAAGAAGCAAGTGGAAATTGAGAAAGCCAGATATCACAACGCAGTCCAGGTCAGCAAGAACCTGATATTGGACAATCTGAAAACAAGCCTTCCCAAGGTGTTCCAAACATTGATGGCATTTTCTGGTGCTTATGTTCAGGGCATTGAGGCTATATTTAGTGACACCAAGCCAGCAGAGAGTTCTGATGGTGAAGTTCAAACCTATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF630 DUF632

Protein Analysis

652

Amino Acids

74.6

Weight (kDa)

5.43

Isoelectric Point (pI)

63.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF630	PF04783	1 - 59	3.9e-21	Protein of unknown function (DUF630)
DUF632	PF04782	215 - 518	5.5e-85	Protein of unknown function (DUF632)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004060)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G34670 AT2G34670
fragaria_vesca	FvH4_3g09830
malus_domestica	MD05G1275400.v1.1 MD10G1254900.v1.1
prunus_persica	Prupe.4G088700_v2.0.a1 Prupe.4G088700_v2.0.a1 Prupe.4G088700_v2.0.a1 Prupe.4G088700_v2.0.a1 Prupe.4G088700_v2.0.a1 Prupe.4G088700_v2.0.a1 Prupe.4G088700_v2.0.a1 Prupe.4G088700_v2.0.a1 Prupe.4G088700_v2.0.a1 Prupe.4G088700_v2.0.a1
pyrus_communis	pycom05g25660 pycom10g21030 pycom10g21040
rosa_chinensis	RchiOBHm_Chr5g0015541
rosa_laevigata	RLG00000032207
rosa_multiflora	Rmu_sc0003064.1_g000007
rosa_roxburghii	Rroxscaffold_1G00060970
rosa_rugosa	Rorug05G0028100 Rorug05G0028200 Rorug05G0028300 Rorug05G0028300 Rorug05G0028300 Rorug05G0028300
rosa_samantha	Rh5AG121600 Rh5BG120400 Rh5CG130700 Rh5DG119300
rosa_wichuraiana	Rw5G010490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1386
Acc36I	ACCTGC	1 cut(s)	1386
AccIII	TCCGGA	1 cut(s)	1178
AciI	CCGC	2 cut(s)	227, 929
AclWI	GGATC	2 cut(s)	1396, 1409
AcoI	YGGCCR	1 cut(s)	584
AcsI	RAATTY	3 cut(s)	98, 473, 1557
AcuI	CTGAAG	4 cut(s)	672, 1079, 1374, 1764
AfaI	GTAC	2 cut(s)	621, 1448
AfiI	CCNNNNNNNGG	2 cut(s)	1819, 1846
AgeI	ACCGGT	1 cut(s)	553
AgsI	TTSAA	8 cut(s)	127, 191, 839, 846, 1249, 1313, 1753, 1949
AjnI	CCWGG	3 cut(s)	889, 1026, 1797
AjuI	GAANNNNNNNTTGG	4 cut(s)	1293, 1325, 1802, 1834
Alw21I	GWGCWC	6 cut(s)	898, 1169, 1286, 1584, 1671, 1697
Alw26I	GTCTC	2 cut(s)	409, 455
Alw44I	GTGCAC	1 cut(s)	1165
AlwI	GGATC	2 cut(s)	1396, 1409
AlwNI	CAGNNNCTG	1 cut(s)	173
Ama87I	CYCGRG	1 cut(s)	1610
Aor13HI	TCCGGA	1 cut(s)	1178
AoxI	GGCC	5 cut(s)	316, 584, 887, 1524, 1705
ApaLI	GTGCAC	1 cut(s)	1165
ApeKI	GCWGC	8 cut(s)	526, 541, 1035, 1304, 1483, 1517, 1567, 1621
ApoI	RAATTY	3 cut(s)	98, 473, 1557
AseI	ATTAAT	1 cut(s)	1172
AsiGI	ACCGGT	1 cut(s)	553
Asp700I	GAANNNNTTC	1 cut(s)	39
AspS9I	GGNCC	5 cut(s)	361, 639, 869, 1699, 1706
AsuHPI	GGTGA	7 cut(s)	94, 107, 216, 393, 1494, 1669, 1952
AvaI	CYCGRG	1 cut(s)	1610
AvaII	GGWCC	4 cut(s)	361, 639, 869, 1699
BaeGI	GKGCMC	2 cut(s)	835, 1169
BalI	TGGCCA	1 cut(s)	586
BamHI	GGATCC	1 cut(s)	1401
BanII	GRGCYC	2 cut(s)	898, 1671
BbsI	GAAGAC	2 cut(s)	489, 1085
Bbv12I	GWGCWC	6 cut(s)	898, 1169, 1286, 1584, 1671, 1697
BbvI	GCAGC	8 cut(s)	513, 553, 1047, 1316, 1495, 1529, 1579, 1608
BccI	CCATC	9 cut(s)	229, 1112, 1295, 1535, 1556, 1657, 1676, 1858, 1931
BcgI	CGANNNNNNTGC	2 cut(s)	1670, 1704
BciT130I	CCWGG	3 cut(s)	891, 1028, 1799
BciVI	GTATCC	2 cut(s)	730, 1164
BclI	TGATCA	1 cut(s)	1429
BcoDI	GTCTC	2 cut(s)	409, 455
BfaI	CTAG	6 cut(s)	320, 828, 864, 873, 977, 1316
BfmI	CTRYAG	6 cut(s)	539, 603, 749, 1125, 1565, 1589
BfuAI	ACCTGC	1 cut(s)	1386
BfuI	GTATCC	2 cut(s)	730, 1164
BisI	GCNGC	8 cut(s)	527, 542, 1036, 1305, 1484, 1518, 1568, 1622
BlpI	GCTNAGC	1 cut(s)	1670
BlsI	GCNGC	8 cut(s)	528, 543, 1037, 1306, 1485, 1519, 1569, 1623
Bme1390I	CCNGG	3 cut(s)	891, 1028, 1799
Bme18I	GGWCC	4 cut(s)	361, 639, 869, 1699
BmeT110I	CYCGRG	1 cut(s)	1610
BmgT120I	GGNCC	5 cut(s)	361, 639, 869, 1699, 1706
BmiI	GGNNCC	4 cut(s)	363, 435, 818, 1403
BmrFI	CCNGG	3 cut(s)	891, 1028, 1799
BmrI	ACTGGG	1 cut(s)	106
BmsI	GCATC	7 cut(s)	23, 97, 841, 912, 1194, 1678, 1723
BmuI	ACTGGG	1 cut(s)	106
BpiI	GAAGAC	2 cut(s)	489, 1085
BpmI	CTGGAG	1 cut(s)	165
Bpu10I	CCTNAGC	3 cut(s)	208, 657, 1710
Bpu1102I	GCTNAGC	1 cut(s)	1670
BpuEI	CTTGAG	2 cut(s)	301, 1300
BsaBI	GATNNNNATC	2 cut(s)	297, 1431
BsaJI	CCNNGG	4 cut(s)	615, 642, 1702, 1845
BsaWI	WCCGGW	2 cut(s)	553, 1178
Bsc4I	CCNNNNNNNGG	2 cut(s)	1819, 1846
Bse118I	RCCGGY	1 cut(s)	553
Bse1I	ACTGG	2 cut(s)	112, 148
Bse3DI	GCAATG	1 cut(s)	898
Bse8I	GATNNNNATC	2 cut(s)	297, 1431
BseAI	TCCGGA	1 cut(s)	1178
BseBI	CCWGG	3 cut(s)	891, 1028, 1799
BseDI	CCNNGG	4 cut(s)	615, 642, 1702, 1845
BseGI	GGATG	7 cut(s)	337, 673, 1024, 1432, 1432, 1548, 1714
BseJI	GATNNNNATC	2 cut(s)	297, 1431
BseLI	CCNNNNNNNGG	2 cut(s)	1819, 1846
BseMI	GCAATG	1 cut(s)	898
BseMII	CTCAG	7 cut(s)	165, 283, 925, 1172, 1253, 1314, 1684
BseNI	ACTGG	2 cut(s)	112, 148
BseRI	GAGGAG	3 cut(s)	255, 345, 1592
BseSI	GKGCMC	2 cut(s)	835, 1169
BseXI	GCAGC	8 cut(s)	513, 553, 1047, 1316, 1495, 1529, 1579, 1608
BshFI	GGCC	5 cut(s)	318, 586, 889, 1526, 1707
BshTI	ACCGGT	1 cut(s)	553
BsiHKAI	GWGCWC	6 cut(s)	898, 1169, 1286, 1584, 1671, 1697
BsiHKCI	CYCGRG	1 cut(s)	1610
BsiSI	CCGG	2 cut(s)	554, 1179
BslFI	GGGAC	2 cut(s)	347, 395
BslI	CCNNNNNNNGG	2 cut(s)	1819, 1846
BsmAI	GTCTC	2 cut(s)	409, 455
BsmFI	GGGAC	2 cut(s)	347, 395
BsmI	GAATGC	1 cut(s)	1217
BsnI	GGCC	5 cut(s)	318, 586, 889, 1526, 1707
BsoBI	CYCGRG	1 cut(s)	1610
Bsp1286I	GDGCHC	7 cut(s)	835, 898, 1169, 1286, 1584, 1671, 1697
Bsp13I	TCCGGA	1 cut(s)	1178
Bsp143I	GATC	5 cut(s)	298, 821, 1401, 1429, 1499
Bsp1720I	GCTNAGC	1 cut(s)	1670
Bsp19I	CCATGG	1 cut(s)	615
BspACI	CCGC	2 cut(s)	227, 929
BspANI	GGCC	5 cut(s)	318, 586, 889, 1526, 1707
BspCNI	CTCAG	7 cut(s)	166, 282, 924, 1171, 1252, 1315, 1683
BspEI	TCCGGA	1 cut(s)	1178
BspLI	GGNNCC	4 cut(s)	363, 435, 818, 1403
BspMAI	CTGCAG	4 cut(s)	543, 607, 1569, 1593
BspMI	ACCTGC	1 cut(s)	1386
BspPI	GGATC	2 cut(s)	1396, 1409
BspQI	GCTCTTC	1 cut(s)	957
BsrDI	GCAATG	1 cut(s)	898
BsrFI	RCCGGY	1 cut(s)	553
BsrI	ACTGG	2 cut(s)	112, 148
BssAI	RCCGGY	1 cut(s)	553
BssECI	CCNNGG	4 cut(s)	615, 642, 1702, 1845
BssMI	GATC	5 cut(s)	298, 821, 1401, 1429, 1499
BssT1I	CCWWGG	4 cut(s)	615, 642, 1702, 1845
Bst2UI	CCWGG	3 cut(s)	891, 1028, 1799
Bst4CI	ACNGT	3 cut(s)	430, 505, 742
Bst6I	CTCTTC	6 cut(s)	489, 770, 957, 1456, 1569, 1610
BstAPI	GCANNNNNTGC	1 cut(s)	1588
BstC8I	GCNNGC	4 cut(s)	316, 887, 1693, 1923
BstDSI	CCRYGG	1 cut(s)	615
BstENI	CCTNNNNNAGG	1 cut(s)	1844
BstF5I	GGATG	7 cut(s)	337, 673, 1024, 1432, 1432, 1548, 1714
BstKTI	GATC	5 cut(s)	301, 824, 1404, 1432, 1502
BstMAI	GTCTC	2 cut(s)	409, 455
BstMBI	GATC	5 cut(s)	298, 821, 1401, 1429, 1499
BstMWI	GCNNNNNNNGC	4 cut(s)	73, 1096, 1523, 1588
BstNI	CCWGG	3 cut(s)	891, 1028, 1799
BstSCI	CCNGG	3 cut(s)	889, 1026, 1797
BstSFI	CTRYAG	6 cut(s)	539, 603, 749, 1125, 1565, 1589
BstSLI	GKGCMC	2 cut(s)	835, 1169
BstV1I	GCAGC	8 cut(s)	513, 553, 1047, 1316, 1495, 1529, 1579, 1608
BstV2I	GAAGAC	2 cut(s)	489, 1085
BstX2I	RGATCY	1 cut(s)	1401
BstYI	RGATCY	1 cut(s)	1401
BsuI	GTATCC	2 cut(s)	730, 1164
BsuRI	GGCC	5 cut(s)	318, 586, 889, 1526, 1707
BtgI	CCRYGG	1 cut(s)	615
BtgZI	GCGATG	1 cut(s)	1280
BtsCI	GGATG	7 cut(s)	337, 673, 1024, 1432, 1432, 1548, 1714
BtsIMutI	CAGTG	1 cut(s)	435
BveI	ACCTGC	1 cut(s)	1386
Cac8I	GCNNGC	4 cut(s)	316, 887, 1693, 1923
CaiI	CAGNNNCTG	1 cut(s)	173
Cfr10I	RCCGGY	1 cut(s)	553
Cfr13I	GGNCC	5 cut(s)	361, 639, 869, 1699, 1706
CseI	GACGC	1 cut(s)	1079
Csp6I	GTAC	2 cut(s)	620, 1447
CspAI	ACCGGT	1 cut(s)	553
CspCI	CAANNNNNGTGG	6 cut(s)	219, 254, 1425, 1460, 1541, 1576
CviAII	CATG	5 cut(s)	419, 440, 616, 813, 1208
CviQI	GTAC	2 cut(s)	620, 1447
DpnI	GATC	5 cut(s)	300, 823, 1403, 1431, 1501
DpnII	GATC	5 cut(s)	298, 821, 1401, 1429, 1499
DraI	TTTAAA	1 cut(s)	699
EaeI	YGGCCR	1 cut(s)	584
Eam1104I	CTCTTC	6 cut(s)	489, 770, 957, 1456, 1569, 1610
EarI	CTCTTC	6 cut(s)	489, 770, 957, 1456, 1569, 1610
Ecl136II	GAGCTC	2 cut(s)	896, 1669
Eco130I	CCWWGG	4 cut(s)	615, 642, 1702, 1845
Eco24I	GRGCYC	2 cut(s)	898, 1671
Eco32I	GATATC	1 cut(s)	1784
Eco47I	GGWCC	4 cut(s)	361, 639, 869, 1699
Eco53kI	GAGCTC	2 cut(s)	896, 1669
Eco57I	CTGAAG	4 cut(s)	672, 1079, 1374, 1764
Eco88I	CYCGRG	1 cut(s)	1610
EcoICRI	GAGCTC	2 cut(s)	896, 1669
EcoNI	CCTNNNNNAGG	1 cut(s)	1844
EcoO109I	RGGNCCY	1 cut(s)	639
EcoRII	CCWGG	3 cut(s)	889, 1026, 1797
EcoRV	GATATC	1 cut(s)	1784
EcoT14I	CCWWGG	4 cut(s)	615, 642, 1702, 1845
EcoT22I	ATGCAT	1 cut(s)	1209
EcoT38I	GRGCYC	2 cut(s)	898, 1671
ErhI	CCWWGG	4 cut(s)	615, 642, 1702, 1845
FaeI	CATG	5 cut(s)	422, 443, 619, 816, 1211
FalI	AAGNNNNNCTT	4 cut(s)	626, 658, 1262, 1294
FaqI	GGGAC	2 cut(s)	347, 395
FatI	CATG	5 cut(s)	418, 439, 615, 812, 1207
FauNDI	CATATG	1 cut(s)	1193
FbaI	TGATCA	1 cut(s)	1429
Fnu4HI	GCNGC	8 cut(s)	527, 542, 1036, 1305, 1484, 1518, 1568, 1622
FokI	GGATG	7 cut(s)	344, 680, 1031, 1419, 1439, 1535, 1701
FriOI	GRGCYC	2 cut(s)	898, 1671
Fsp4HI	GCNGC	8 cut(s)	527, 542, 1036, 1305, 1484, 1518, 1568, 1622
FspBI	CTAG	6 cut(s)	320, 828, 864, 873, 977, 1316
GluI	GCNGC	8 cut(s)	527, 542, 1036, 1305, 1484, 1518, 1568, 1622
GsuI	CTGGAG	1 cut(s)	165
HaeIII	GGCC	5 cut(s)	318, 586, 889, 1526, 1707
HapII	CCGG	2 cut(s)	554, 1179
HgaI	GACGC	1 cut(s)	1079
Hin1II	CATG	5 cut(s)	422, 443, 619, 816, 1211
HinfI	GANTC	7 cut(s)	170, 176, 368, 599, 754, 860, 1319
HpaII	CCGG	2 cut(s)	554, 1179
HphI	GGTGA	7 cut(s)	94, 107, 216, 393, 1494, 1669, 1952
Hpy166II	GTNNAC	2 cut(s)	878, 1167
Hpy188III	TCNNGA	5 cut(s)	846, 913, 1179, 1531, 1612
Hpy8I	GTNNAC	2 cut(s)	878, 1167
HpyAV	CCTTC	4 cut(s)	54, 255, 1547, 1850
HpyCH4III	ACNGT	3 cut(s)	430, 505, 742
HpyF10VI	GCNNNNNNNGC	4 cut(s)	73, 1096, 1523, 1588
Hsp92II	CATG	5 cut(s)	422, 443, 619, 816, 1211
Kpn2I	TCCGGA	1 cut(s)	1178
Ksp22I	TGATCA	1 cut(s)	1429
Kzo9I	GATC	5 cut(s)	298, 821, 1401, 1429, 1499
LguI	GCTCTTC	1 cut(s)	957
LmnI	GCTCC	7 cut(s)	146, 184, 433, 816, 893, 1579, 1666
Lsp1109I	GCAGC	8 cut(s)	513, 553, 1047, 1316, 1495, 1529, 1579, 1608
LweI	GCATC	7 cut(s)	23, 97, 841, 912, 1194, 1678, 1723
MaeI	CTAG	6 cut(s)	320, 828, 864, 873, 977, 1316
MaeIII	GTNAC	2 cut(s)	1472, 1910
MalI	GATC	5 cut(s)	300, 823, 1403, 1431, 1501
MboI	GATC	5 cut(s)	298, 821, 1401, 1429, 1499
MflI	RGATCY	1 cut(s)	1401
MhlI	GDGCHC	7 cut(s)	835, 898, 1169, 1286, 1584, 1671, 1697
MlsI	TGGCCA	1 cut(s)	586
MluNI	TGGCCA	1 cut(s)	586
MlyI	GAGTC	7 cut(s)	179, 185, 362, 593, 763, 869, 1328
MmeI	TCCRAC	5 cut(s)	96, 270, 645, 1316, 1429
Mox20I	TGGCCA	1 cut(s)	586
Mph1103I	ATGCAT	1 cut(s)	1209
MroI	TCCGGA	1 cut(s)	1178
MroXI	GAANNNNTTC	1 cut(s)	39
MscI	TGGCCA	1 cut(s)	586
MseI	TTAA	5 cut(s)	24, 134, 698, 954, 1172
MslI	CAYNNNNRTG	1 cut(s)	811
Msp20I	TGGCCA	1 cut(s)	586
MspA1I	CMGCKG	1 cut(s)	692
MspI	CCGG	2 cut(s)	554, 1179
MspR9I	CCNGG	3 cut(s)	891, 1028, 1799
Mva1269I	GAATGC	1 cut(s)	1217
MvaI	CCWGG	3 cut(s)	891, 1028, 1799
MwoI	GCNNNNNNNGC	4 cut(s)	73, 1096, 1523, 1588
NcoI	CCATGG	1 cut(s)	615
NdeI	CATATG	1 cut(s)	1193
NdeII	GATC	5 cut(s)	298, 821, 1401, 1429, 1499
NlaIII	CATG	5 cut(s)	422, 443, 619, 816, 1211
NlaIV	GGNNCC	4 cut(s)	363, 435, 818, 1403
NmuCI	GTSAC	2 cut(s)	1472, 1910
NsiI	ATGCAT	1 cut(s)	1209
PaeR7I	CTCGAG	1 cut(s)	1610
PaqCI	CACCTGC	1 cut(s)	1386
PciSI	GCTCTTC	1 cut(s)	957
PctI	GAATGC	1 cut(s)	1217
PdmI	GAANNNNTTC	1 cut(s)	39
PinAI	ACCGGT	1 cut(s)	553
PkrI	GCNGC	8 cut(s)	528, 543, 1037, 1306, 1485, 1519, 1569, 1623
PleI	GAGTC	7 cut(s)	178, 184, 362, 593, 762, 868, 1327
PpsI	GAGTC	7 cut(s)	178, 184, 362, 593, 762, 868, 1327
PpuMI	RGGWCCY	1 cut(s)	639
PshBI	ATTAAT	1 cut(s)	1172
Psp124BI	GAGCTC	2 cut(s)	898, 1671
Psp5II	RGGWCCY	1 cut(s)	639
Psp6I	CCWGG	3 cut(s)	889, 1026, 1797
PspGI	CCWGG	3 cut(s)	889, 1026, 1797
PspN4I	GGNNCC	4 cut(s)	363, 435, 818, 1403
PspPI	GGNCC	5 cut(s)	361, 639, 869, 1699, 1706
PspPPI	RGGWCCY	1 cut(s)	639
PstI	CTGCAG	4 cut(s)	543, 607, 1569, 1593
PstNI	CAGNNNCTG	1 cut(s)	173
PsuI	RGATCY	1 cut(s)	1401
PvuII	CAGCTG	1 cut(s)	692
RsaI	GTAC	2 cut(s)	621, 1448
RsaNI	GTAC	2 cut(s)	620, 1447
RseI	CAYNNNNRTG	1 cut(s)	811
SacI	GAGCTC	2 cut(s)	898, 1671
SapI	GCTCTTC	1 cut(s)	957
SaqAI	TTAA	5 cut(s)	24, 134, 698, 954, 1172
SatI	GCNGC	8 cut(s)	527, 542, 1036, 1305, 1484, 1518, 1568, 1622
Sau3AI	GATC	5 cut(s)	298, 821, 1401, 1429, 1499
Sau96I	GGNCC	5 cut(s)	361, 639, 869, 1699, 1706
SchI	GAGTC	7 cut(s)	179, 185, 362, 593, 763, 869, 1328
ScrFI	CCNGG	3 cut(s)	891, 1028, 1799
SduI	GDGCHC	7 cut(s)	835, 898, 1169, 1286, 1584, 1671, 1697
SfaNI	GCATC	7 cut(s)	23, 97, 841, 912, 1194, 1678, 1723
SfcI	CTRYAG	6 cut(s)	539, 603, 749, 1125, 1565, 1589
Sfr274I	CTCGAG	1 cut(s)	1610
SinI	GGWCC	4 cut(s)	361, 639, 869, 1699
SlaI	CTCGAG	1 cut(s)	1610
SmiMI	CAYNNNNRTG	1 cut(s)	811
SmlI	CTYRAG	3 cut(s)	280, 1279, 1610
SmoI	CTYRAG	3 cut(s)	280, 1279, 1610
SsiI	CCGC	2 cut(s)	227, 929
SspI	AATATT	1 cut(s)	842
SspMI	CTAG	6 cut(s)	320, 828, 864, 873, 977, 1316
SstI	GAGCTC	2 cut(s)	898, 1671
StyD4I	CCNGG	3 cut(s)	889, 1026, 1797
StyI	CCWWGG	4 cut(s)	615, 642, 1702, 1845
TaaI	ACNGT	3 cut(s)	430, 505, 742
TaqI	TCGA	2 cut(s)	546, 1611
TatI	WGTACW	1 cut(s)	1446
Tru1I	TTAA	5 cut(s)	24, 134, 698, 954, 1172
Tru9I	TTAA	5 cut(s)	24, 134, 698, 954, 1172
TscAI	CASTG	1 cut(s)	435
TseFI	GTSAC	2 cut(s)	1472, 1910
TseI	GCWGC	8 cut(s)	526, 541, 1035, 1304, 1483, 1517, 1567, 1621
Tsp45I	GTSAC	2 cut(s)	1472, 1910
TspDTI	ATGAA	9 cut(s)	86, 384, 438, 558, 777, 939, 1035, 1224, 1629
TspRI	CASTG	1 cut(s)	435
VneI	GTGCAC	1 cut(s)	1165
VpaK11BI	GGWCC	4 cut(s)	361, 639, 869, 1699
VspI	ATTAAT	1 cut(s)	1172
XagI	CCTNNNNNAGG	1 cut(s)	1844
XapI	RAATTY	3 cut(s)	98, 473, 1557
XhoI	CTCGAG	1 cut(s)	1610
XmnI	GAANNNNTTC	1 cut(s)	39
XspI	CTAG	6 cut(s)	320, 828, 864, 873, 977, 1316
Zsp2I	ATGCAT	1 cut(s)	1209

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.