RLG00000032798

Belongs to the 14-3-3 family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
19170427 .. 19174365
3939 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000032798

Sequence Viewer

Length: 1047 bp
ATGATTGCAACTTCTCTCGACTCCAAAGGGGAGTTGATCAAATATTCAAAAGCTATGAGCAATTTGAGGGAGTTAGAGAGCAGAGGATGCCAAATTTTGCATGGGGTGGATGTCAACACCATGCTCCATCACCCTGAACTTATTAACAGACAGTTTGATCGAATAATTTATAACTTCCCTCATGCTGGTTACTTGAAAGGCCGCCCTCGTTCATCAGAAAAGAATAAGTCCCAAATTTTGTTGCATCAGAGTTTGGTGAGGGGATACTTCATGAACTCACGGGAGATGCTGACTAAAAATGCAGAAATTCATGTCACACACAAGACATCATATCCTTTTAAACGCGAAAAATTGGTCTACACTGCTAAGCTGGCTCAGGAGGCAGAGCGATACGATGAGATGGTGGATGCAATGAAGATGGTTGCAAATCTTGATGTTGAATTGACCCTTGAAGAGAGAAGCTACCTCTCTTTTGGGTACAAGAATGTTGTTGATGCTCGGAGATCATCATGGAGGATCTTATCATCAACAGAGCAGACGGAGGAGGCGAAAGGAAATAATATTCACATGAAGGTTCTAAAGAAATATAGACAGAGAGTTGAATCAGAGATATCAATTATTTGTAGAGATATCATCTCAGTGCTTGATAGTCATCTCATCCCTTCGACTTCAGATGGTGAATCAACTGTGCATTATCATAAGATGAAAGGAGACTTTTATAGGTATCTCGCAGAAATCAAGGCCGGTGATGAGAAAGAGGAGGCTATTAAACAGTCGAAGAAAGCATATTACAAGGCCCTCACTGTTGCAGAAGCTGAGTTGCCTCCTACAAATCCCACCCGTTTGGGTGCGGCTTTGCACTTGTCAATCTTATATCATGAGTTCCTGAATAATCCGGAGACGGCCTGCCGTCTTACAAAGATAGCTTTTGAGGAAGGCACTGCTGAGATTAACACACTGAACAATGAACCATACAAGAATACCCTCACGGCCTTGAAACTTTTAAGGGAAAACTACAGCTTGTGGACTTCACAACTTCCACATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

349

Amino Acids

40.12

Weight (kDa)

8.67

Isoelectric Point (pI)

45.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BMT5-like PF10354 1 - 123 3.2e-27 rRNA (uridine-N3-)-methyltransferase BTM5-like
14-3-3 PF00244 121 - 343 2.1e-81 14-3-3 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0018612)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 171
AccI GTMKAC 1 cut(s) 357
AccII CGCG 1 cut(s) 345
AccIII TCCGGA 1 cut(s) 895
AciI CCGC 2 cut(s) 202, 851
AclWI GGATC 1 cut(s) 524
AcsI RAATTY 3 cut(s) 93, 234, 306
AcuI CTGAAG 1 cut(s) 654
AfaI GTAC 1 cut(s) 479
AfiI CCNNNNNNNGG 1 cut(s) 185
AgsI TTSAA 6 cut(s) 48, 196, 440, 452, 602, 997
AluBI AGCT 6 cut(s) 53, 370, 462, 815, 926, 1020
AluI AGCT 6 cut(s) 53, 370, 462, 815, 926, 1020
Alw26I GTCTC 2 cut(s) 705, 893
AlwI GGATC 1 cut(s) 524
AlwNI CAGNNNCTG 1 cut(s) 815
Aor13HI TCCGGA 1 cut(s) 895
AoxI GGCC 5 cut(s) 199, 741, 795, 903, 990
ApoI RAATTY 3 cut(s) 93, 234, 306
ArsI GACNNNNNNTTYG 2 cut(s) 339, 371
AspS9I GGNCC 1 cut(s) 796
AsuHPI GGTGA 4 cut(s) 122, 268, 689, 758
BccI CCATC 4 cut(s) 135, 394, 412, 668
BceAI ACGGC 3 cut(s) 894, 918, 1005
BciVI GTATCC 1 cut(s) 257
BclI TGATCA 1 cut(s) 36
BcoDI GTCTC 2 cut(s) 705, 893
BfmI CTRYAG 1 cut(s) 1015
BfuI GTATCC 1 cut(s) 257
BisI GCNGC 2 cut(s) 202, 852
BlpI GCTNAGC 1 cut(s) 366
BlsI GCNGC 2 cut(s) 203, 853
BmgT120I GGNCC 1 cut(s) 796
BmsI GCATC 5 cut(s) 77, 253, 276, 397, 484
Bpu10I CCTNAGC 1 cut(s) 375
Bpu1102I GCTNAGC 1 cut(s) 366
BsaBI GATNNNNATC 1 cut(s) 651
BsaWI WCCGGW 1 cut(s) 895
Bsc4I CCNNNNNNNGG 1 cut(s) 185
Bse118I RCCGGY 1 cut(s) 743
Bse3DI GCAATG 1 cut(s) 417
Bse8I GATNNNNATC 1 cut(s) 651
BseAI TCCGGA 1 cut(s) 895
BseGI GGATG 4 cut(s) 92, 115, 412, 657
BseJI GATNNNNATC 1 cut(s) 651
BseLI CCNNNNNNNGG 1 cut(s) 185
BseMI GCAATG 1 cut(s) 417
BseMII CTCAG 4 cut(s) 389, 651, 807, 936
BseRI GAGGAG 2 cut(s) 557, 773
Bsh1236I CGCG 1 cut(s) 345
BshFI GGCC 5 cut(s) 201, 743, 797, 905, 992
BsiSI CCGG 2 cut(s) 744, 896
BslFI GGGAC 1 cut(s) 214
BslI CCNNNNNNNGG 1 cut(s) 185
BsmAI GTCTC 2 cut(s) 705, 893
BsmBI CGTCTC 1 cut(s) 893
BsmFI GGGAC 1 cut(s) 214
BsnI GGCC 5 cut(s) 201, 743, 797, 905, 992
Bsp13I TCCGGA 1 cut(s) 895
Bsp143I GATC 4 cut(s) 36, 157, 503, 516
Bsp1720I GCTNAGC 1 cut(s) 366
BspACI CCGC 2 cut(s) 202, 851
BspANI GGCC 5 cut(s) 201, 743, 797, 905, 992
BspCNI CTCAG 4 cut(s) 388, 650, 808, 937
BspEI TCCGGA 1 cut(s) 895
BspFNI CGCG 1 cut(s) 345
BspHI TCATGA 2 cut(s) 270, 877
BspPI GGATC 1 cut(s) 524
BsrDI GCAATG 1 cut(s) 417
BsrFI RCCGGY 1 cut(s) 743
BssAI RCCGGY 1 cut(s) 743
BssMI GATC 4 cut(s) 36, 157, 503, 516
Bst4CI ACNGT 4 cut(s) 153, 688, 774, 805
Bst6I CTCTTC 1 cut(s) 447
BstAPI GCANNNNNTGC 1 cut(s) 87
BstC8I GCNNGC 2 cut(s) 372, 907
BstDEI CTNAG 5 cut(s) 366, 375, 637, 816, 945
BstF5I GGATG 4 cut(s) 92, 115, 412, 657
BstFNI CGCG 1 cut(s) 345
BstKTI GATC 4 cut(s) 39, 160, 506, 519
BstMAI GTCTC 2 cut(s) 705, 893
BstMBI GATC 4 cut(s) 36, 157, 503, 516
BstMWI GCNNNNNNNGC 3 cut(s) 87, 371, 380
BstSFI CTRYAG 1 cut(s) 1015
BstUI CGCG 1 cut(s) 345
BstX2I RGATCY 1 cut(s) 516
BstXI CCANNNNNNTGG 1 cut(s) 844
BstYI RGATCY 1 cut(s) 516
BsuI GTATCC 1 cut(s) 257
BsuRI GGCC 5 cut(s) 201, 743, 797, 905, 992
BtsCI GGATG 4 cut(s) 92, 115, 412, 657
BtsI GCAGTG 2 cut(s) 360, 939
BtsIMutI CAGTG 5 cut(s) 360, 645, 801, 939, 956
Cac8I GCNNGC 2 cut(s) 372, 907
CaiI CAGNNNCTG 1 cut(s) 815
CciI TCATGA 2 cut(s) 270, 877
Cfr10I RCCGGY 1 cut(s) 743
Cfr13I GGNCC 1 cut(s) 796
Csp6I GTAC 1 cut(s) 478
CviAII CATG 8 cut(s) 101, 121, 182, 271, 311, 510, 568, 878
CviQI GTAC 1 cut(s) 478
DdeI CTNAG 5 cut(s) 366, 375, 637, 816, 945
DpnI GATC 4 cut(s) 38, 159, 505, 518
DpnII GATC 4 cut(s) 36, 157, 503, 516
DraI TTTAAA 1 cut(s) 340
Eam1104I CTCTTC 1 cut(s) 447
EarI CTCTTC 1 cut(s) 447
Eco32I GATATC 2 cut(s) 612, 631
Eco57I CTGAAG 1 cut(s) 654
EcoO109I RGGNCCY 1 cut(s) 796
EcoRV GATATC 2 cut(s) 612, 631
Esp3I CGTCTC 1 cut(s) 893
FaeI CATG 8 cut(s) 104, 124, 185, 274, 314, 513, 571, 881
FaqI GGGAC 1 cut(s) 214
FatI CATG 8 cut(s) 100, 120, 181, 270, 310, 509, 567, 877
FbaI TGATCA 1 cut(s) 36
FblI GTMKAC 1 cut(s) 357
Fnu4HI GCNGC 2 cut(s) 202, 852
FokI GGATG 4 cut(s) 99, 122, 419, 644
Fsp4HI GCNGC 2 cut(s) 202, 852
GluI GCNGC 2 cut(s) 202, 852
HaeIII GGCC 5 cut(s) 201, 743, 797, 905, 992
HapII CCGG 2 cut(s) 744, 896
Hin1II CATG 8 cut(s) 104, 124, 185, 274, 314, 513, 571, 881
HincII GTYRAC 1 cut(s) 115
HindII GTYRAC 1 cut(s) 115
HinfI GANTC 3 cut(s) 20, 602, 680
HpaII CCGG 2 cut(s) 744, 896
HphI GGTGA 4 cut(s) 122, 268, 689, 758
Hpy166II GTNNAC 3 cut(s) 115, 358, 1026
Hpy188I TCNGA 5 cut(s) 217, 249, 501, 607, 673
Hpy188III TCNNGA 7 cut(s) 17, 271, 377, 431, 878, 886, 896
Hpy8I GTNNAC 3 cut(s) 115, 358, 1026
HpyAV CCTTC 3 cut(s) 565, 672, 929
HpyCH4III ACNGT 4 cut(s) 153, 688, 774, 805
HpyCH4V TGCA 9 cut(s) 8, 100, 244, 302, 410, 425, 691, 809, 859
HpyF10VI GCNNNNNNNGC 3 cut(s) 87, 371, 380
HpyF3I CTNAG 5 cut(s) 366, 375, 637, 816, 945
Hsp92II CATG 8 cut(s) 104, 124, 185, 274, 314, 513, 571, 881
Kpn2I TCCGGA 1 cut(s) 895
Ksp22I TGATCA 1 cut(s) 36
Kzo9I GATC 4 cut(s) 36, 157, 503, 516
LmnI GCTCC 1 cut(s) 129
LpnPI CCDG 8 cut(s) 147, 171, 356, 362, 757, 899, 909, 919
LweI GCATC 5 cut(s) 77, 253, 276, 397, 484
MaeIII GTNAC 2 cut(s) 188, 313
MalI GATC 4 cut(s) 38, 159, 505, 518
MboI GATC 4 cut(s) 36, 157, 503, 516
MboII GAAGA 3 cut(s) 427, 464, 790
MflI RGATCY 1 cut(s) 516
MluCI AATT 8 cut(s) 61, 93, 165, 234, 306, 350, 440, 615
MlyI GAGTC 1 cut(s) 14
MroI TCCGGA 1 cut(s) 895
MseI TTAA 6 cut(s) 144, 339, 768, 951, 1004, 1045
MslI CAYNNNNRTG 1 cut(s) 638
MspI CCGG 2 cut(s) 744, 896
MvnI CGCG 1 cut(s) 345
MwoI GCNNNNNNNGC 3 cut(s) 87, 371, 380
NdeII GATC 4 cut(s) 36, 157, 503, 516
NlaIII CATG 8 cut(s) 104, 124, 185, 274, 314, 513, 571, 881
NmuCI GTSAC 1 cut(s) 313
PagI TCATGA 2 cut(s) 270, 877
PcsI WCGNNNNNNNCGW 1 cut(s) 545
PfeI GAWTC 2 cut(s) 602, 680
PkrI GCNGC 2 cut(s) 203, 853
PleI GAGTC 1 cut(s) 14
PpsI GAGTC 1 cut(s) 14
PsiI TTATAA 1 cut(s) 171
PspPI GGNCC 1 cut(s) 796
PstNI CAGNNNCTG 1 cut(s) 815
PsuI RGATCY 1 cut(s) 516
RsaI GTAC 1 cut(s) 479
RsaNI GTAC 1 cut(s) 478
RseI CAYNNNNRTG 1 cut(s) 638
SaqAI TTAA 6 cut(s) 144, 339, 768, 951, 1004, 1045
SatI GCNGC 2 cut(s) 202, 852
Sau3AI GATC 4 cut(s) 36, 157, 503, 516
Sau96I GGNCC 1 cut(s) 796
SchI GAGTC 1 cut(s) 14
SetI ASST 9 cut(s) 55, 372, 464, 468, 576, 725, 817, 928, 1022
SfaNI GCATC 5 cut(s) 77, 253, 276, 397, 484
SfcI CTRYAG 1 cut(s) 1015
SmiMI CAYNNNNRTG 1 cut(s) 638
Sse9I AATT 8 cut(s) 61, 93, 165, 234, 306, 350, 440, 615
SsiI CCGC 2 cut(s) 202, 851
SspI AATATT 2 cut(s) 44, 562
TaaI ACNGT 4 cut(s) 153, 688, 774, 805
TaqI TCGA 4 cut(s) 18, 160, 665, 776
TasI AATT 8 cut(s) 61, 93, 165, 234, 306, 350, 440, 615
TauI GCSGC 2 cut(s) 204, 854
TfiI GAWTC 2 cut(s) 602, 680
Tru1I TTAA 6 cut(s) 144, 339, 768, 951, 1004, 1045
Tru9I TTAA 6 cut(s) 144, 339, 768, 951, 1004, 1045
TscAI CASTG 5 cut(s) 367, 645, 808, 946, 963
TseFI GTSAC 1 cut(s) 313
Tsp45I GTSAC 1 cut(s) 313
TspDTI ATGAA 8 cut(s) 201, 259, 287, 299, 428, 584, 719, 981
TspGWI ACGGA 1 cut(s) 554
TspRI CASTG 5 cut(s) 367, 645, 808, 946, 963
XapI RAATTY 3 cut(s) 93, 234, 306
XcmI CCANNNNNNNNNTGG 1 cut(s) 98
XmiI GTMKAC 1 cut(s) 357
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.