RLG00000036231

Lignin degradation and detoxification of lignin-derived products

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0016555
Physical Location & Seq
Reverse (-)
77720195 .. 77722433
2239 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000036231

Sequence Viewer

Length: 1710 bp
ATGGAGGCTTCCAGCTTGACTTTCAAGCCATGGAGTTCTTGCCTCTTCCTTTCCCTTCTCGCCTTCCTGACTCTCCTAGCTTCTTTTGCAGCTGCTGAAACTCACTATCATGAATTTGTTGTTGAAGCAAAGCCAGTGAAGAGGCTGTGCAGAACCCACACCATAATCACAGTCAATGGCCAATTCCCAGGACCAAATTTGGAAGTCAGAAATGGAGATTCTCTTGCTATCACAGTAACAAACAGAGCAAAATATAATATCACTATCCACTGGCATGGAGTAAGGCAGCTAAGAAATCCATGGGCAGATGGACCTGAATATGTCACGCAGTGTCCCATCCAGCCAGGAGCCACTTACACATACCGCTTCACAATTCAAGACCAAGAAGGCACTTTGTGGTGGCATGCACACAGACAATGGCTTAGAGCCACTGTCTATGGAGCCATCATTATCTATCCTAGATTGGGTTCTCCATACCCCTTCTCAATGCCCAAGAAAGAATTTCCCATTCTTCTTGGTGAATGGTGGGATAGGAACCCACTAGATGTCCAGAGGCTGGCAGCATTCACAGGAGGAGCACCCAATGCCTCTGATGCATATACCATAAATGGTCAGCCTGGTGATCTCTATAGATGCTCCAAACAAGAAACTGTGAGAATTCCATTGGAATACGGCGAGACGATTCTCCTGAGAATCATCAATTCTGCACTCAACCAAGAACTGTTCTTCACCATTGCCAACCATAGATTGACTGTTGTGGGTGCTGATGCAGCCTACACCAAACCTTTCACAACCAGACTCATTATGATAGGACCTGGCCAAACTACGGATGTTCTCCTCACGGCTGATCAGCCCCCTGCTCGCTACTATGCTGCTGCACATGTCTATCAGACTGCTCAGAATGCACCCTTTGACAACACCACCACCACTGCCATCCTTGAATACAAGTTTGCTGCTGCTTGTGGGTCAAAGAAAGGGAGATTTTCAGCACCAATACTACCATTGTTACCAGCCTTCAATGATACAGCAACCGCAACTGCATATAATGTTCAGATAAAGAGCCCTTCCCGGGTCCAAATCCCTATGCAGATCGATGATAACCTACTTTTCATTGTAGGTTTGGGACTAATTAACTGCACAGTTCCTAACAGCCCTCGGTGTCAAGGACCAAACAATACCCGCTTTGCAGCTAGCATGAACAATGTTTCTTTTGTATTCCCAAGAACCACGTCCTTAATGCAAGCCTACTATAATGGTATACCTGGTGTCTTCACCACAGATTTTCCACCAGTTCCTCCAGTGCAATTTGATTATACTGGTAATTGTGGAACTAAGCTCTACAAGTTGAAGTATGGTTCTAGTGTACAAATTGTGTTGCAGGACACAAGTATTGTCACAACTGAGGACCATCCTATGCATCTTCATGGGTACCATTTCTATGTCATTGGATCAGGATTTGGCAACTTCAACCCCAGAACAGATCCAGCCAAATTTAACCTCATTGACCCACCACAGAGGAACACCATTGGAACAAATCCAGGTGGATGGGTAGCTATTCGATTTGTGGCTGATAATCCAGGTGTCTGGCTGATGCACTGTCACTTGGATTCACATCTCGTCTTGGGTTTCGCAATGGCTTTTCTAGTAGAGAATGGAAATGGACCACTGCAGTCTGTCATACCACCCCCAGCAGATCTACCCCGATGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0016491 GO:0016722 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

570

Amino Acids

63.18

Weight (kDa)

8.42

Isoelectric Point (pI)

32.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 41 - 154 8.8e-45 Multicopper oxidase
Cu-oxidase PF00394 167 - 316 1.3e-42 Multicopper oxidase
Cu-oxidase_2 PF07731 441 - 552 3.8e-39 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016555)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G30210
fragaria_vesca FvH4_3g39750
malus_domestica MD03G1056400.v1.1 MD11G1057600.v1.1 MD11G1058200.v1.1
pyrus_communis pycom03g04470 pycom11g04820
rosa_chinensis RchiOBHm_Chr5g0071631
rosa_laevigata RLG00000036231 RLG00000036234
rosa_multiflora Rmu_sc0005745.1_g000031
rosa_rugosa Rorug05G0413700
rosa_samantha Rh5CG513000
rosa_wichuraiana Rw5G043640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1428
AccB1I GGYRCC 1 cut(s) 1428
AccB7I CCANNNNNTGG 1 cut(s) 556
AccI GTMKAC 1 cut(s) 1258
AciI CCGC 3 cut(s) 364, 1032, 1180
AclWI GGATC 2 cut(s) 1456, 1475
AcoI YGGCCR 2 cut(s) 178, 817
AcsI RAATTY 5 cut(s) 113, 196, 500, 657, 1490
AdeI CACNNNGTG 2 cut(s) 330, 396
AfaI GTAC 2 cut(s) 1365, 1430
AfiI CCNNNNNNNGG 4 cut(s) 464, 556, 826, 1069
AflIII ACRYGT 1 cut(s) 880
AgsI TTSAA 7 cut(s) 25, 125, 377, 941, 1018, 1348, 1468
AjiI CACGTC 1 cut(s) 1230
AjnI CCWGG 7 cut(s) 187, 343, 616, 814, 1261, 1537, 1576
AluBI AGCT 7 cut(s) 15, 80, 92, 289, 1190, 1336, 1553
AluI AGCT 7 cut(s) 15, 80, 92, 289, 1190, 1336, 1553
Alw21I GWGCWC 1 cut(s) 580
Alw26I GTCTC 1 cut(s) 671
AlwI GGATC 2 cut(s) 1456, 1475
AlwNI CAGNNNCTG 2 cut(s) 95, 556
Ama87I CYCGRG 1 cut(s) 1068
AoxI GGCC 2 cut(s) 178, 817
ApoI RAATTY 5 cut(s) 113, 196, 500, 657, 1490
Asp718I GGTACC 1 cut(s) 1428
AspS9I GGNCC 7 cut(s) 191, 311, 812, 1072, 1166, 1405, 1661
AsuC2I CCSGG 2 cut(s) 1069, 1070
AsuHPI GGTGA 4 cut(s) 530, 632, 721, 1264
AsuNHI GCTAGC 1 cut(s) 1190
AvaI CYCGRG 1 cut(s) 1068
AvaII GGWCC 7 cut(s) 191, 311, 812, 1072, 1166, 1405, 1661
BalI TGGCCA 2 cut(s) 180, 819
BanI GGYRCC 1 cut(s) 1428
BanII GRGCYC 1 cut(s) 1064
BbsI GAAGAC 1 cut(s) 1261
Bbv12I GWGCWC 1 cut(s) 580
BccI CCATC 6 cut(s) 302, 344, 452, 941, 1416, 1539
BceAI ACGGC 2 cut(s) 688, 858
BciT130I CCWGG 7 cut(s) 189, 345, 618, 816, 1263, 1539, 1578
BclI TGATCA 1 cut(s) 847
BcnI CCSGG 2 cut(s) 1069, 1070
BcoDI GTCTC 1 cut(s) 671
BfaI CTAG 6 cut(s) 77, 459, 542, 1191, 1359, 1643
BfmI CTRYAG 2 cut(s) 628, 1667
BglII AGATCT 1 cut(s) 1693
Bme1390I CCNGG 9 cut(s) 189, 345, 618, 816, 1069, 1070, 1263, 1539, 1578
Bme18I GGWCC 7 cut(s) 191, 311, 812, 1072, 1166, 1405, 1661
BmeT110I CYCGRG 1 cut(s) 1068
BmgBI CACGTC 1 cut(s) 1230
BmgT120I GGNCC 7 cut(s) 191, 311, 812, 1072, 1166, 1405, 1661
BmiI GGNNCC 5 cut(s) 349, 442, 536, 1073, 1430
BmrFI CCNGG 9 cut(s) 189, 345, 618, 816, 1069, 1070, 1263, 1539, 1578
BmsI GCATC 5 cut(s) 583, 623, 757, 1426, 1581
BmtI GCTAGC 1 cut(s) 1194
BpiI GAAGAC 1 cut(s) 1261
BpmI CTGGAG 1 cut(s) 1281
BpuMI CCSGG 2 cut(s) 1069, 1070
Bsa29I ATCGAT 1 cut(s) 1092
BsaBI GATNNNNATC 1 cut(s) 1611
BsaJI CCNNGG 5 cut(s) 29, 187, 299, 1068, 1154
Bsc4I CCNNNNNNNGG 4 cut(s) 464, 556, 826, 1069
Bse1I ACTGG 5 cut(s) 134, 275, 1289, 1298, 1321
Bse3DI GCAATG 2 cut(s) 732, 1638
Bse8I GATNNNNATC 1 cut(s) 1611
BseBI CCWGG 7 cut(s) 189, 345, 618, 816, 1263, 1539, 1578
BseCI ATCGAT 1 cut(s) 1092
BseDI CCNNGG 5 cut(s) 29, 187, 299, 1068, 1154
BseGI GGATG 5 cut(s) 336, 835, 933, 1408, 1550
BseJI GATNNNNATC 1 cut(s) 1611
BseLI CCNNNNNNNGG 4 cut(s) 464, 556, 826, 1069
BseMI GCAATG 2 cut(s) 732, 1638
BseMII CTCAG 3 cut(s) 680, 911, 1392
BseNI ACTGG 5 cut(s) 134, 275, 1289, 1298, 1321
BseRI GAGGAG 2 cut(s) 588, 827
BseYI CCCAGC 1 cut(s) 1687
BsgI GTGCAG 4 cut(s) 169, 690, 861, 1120
BshFI GGCC 2 cut(s) 180, 819
BshNI GGYRCC 1 cut(s) 1428
BshVI ATCGAT 1 cut(s) 1092
BsiHKAI GWGCWC 1 cut(s) 580
BsiHKCI CYCGRG 1 cut(s) 1068
BsiSI CCGG 1 cut(s) 1069
BslFI GGGAC 2 cut(s) 318, 1137
BslI CCNNNNNNNGG 4 cut(s) 464, 556, 826, 1069
BsmAI GTCTC 1 cut(s) 671
BsmBI CGTCTC 1 cut(s) 671
BsmFI GGGAC 2 cut(s) 318, 1137
BsmI GAATGC 2 cut(s) 563, 907
BsnI GGCC 2 cut(s) 180, 819
BsoBI CYCGRG 1 cut(s) 1068
Bsp1286I GDGCHC 2 cut(s) 580, 1064
Bsp1407I TGTACA 1 cut(s) 1363
Bsp143I GATC 6 cut(s) 622, 847, 1089, 1448, 1480, 1693
Bsp19I CCATGG 2 cut(s) 29, 299
BspACI CCGC 3 cut(s) 364, 1032, 1180
BspANI GGCC 2 cut(s) 180, 819
BspCNI CTCAG 3 cut(s) 681, 910, 1393
BspDI ATCGAT 1 cut(s) 1092
BspHI TCATGA 1 cut(s) 109
BspLI GGNNCC 5 cut(s) 349, 442, 536, 1073, 1430
BspMAI CTGCAG 1 cut(s) 1671
BspOI GCTAGC 1 cut(s) 1194
BspPI GGATC 2 cut(s) 1456, 1475
BspT107I GGYRCC 1 cut(s) 1428
BsrDI GCAATG 2 cut(s) 732, 1638
BsrGI TGTACA 1 cut(s) 1363
BsrI ACTGG 5 cut(s) 134, 275, 1289, 1298, 1321
BssECI CCNNGG 5 cut(s) 29, 187, 299, 1068, 1154
BssMI GATC 6 cut(s) 622, 847, 1089, 1448, 1480, 1693
BssNAI GTATAC 1 cut(s) 1259
BssT1I CCWWGG 2 cut(s) 29, 299
Bst1107I GTATAC 1 cut(s) 1259
Bst2UI CCWGG 7 cut(s) 189, 345, 618, 816, 1263, 1539, 1578
Bst4CI ACNGT 8 cut(s) 172, 235, 433, 652, 723, 754, 1141, 1598
Bst6I CTCTTC 2 cut(s) 50, 134
BstAPI GCANNNNNTGC 1 cut(s) 584
BstAUI TGTACA 1 cut(s) 1363
BstC8I GCNNGC 5 cut(s) 405, 558, 862, 1192, 1242
BstDEI CTNAG 6 cut(s) 290, 422, 689, 897, 1332, 1401
BstDSI CCRYGG 2 cut(s) 29, 299
BstF5I GGATG 5 cut(s) 336, 835, 933, 1408, 1550
BstKTI GATC 6 cut(s) 625, 850, 1092, 1451, 1483, 1696
BstMAI GTCTC 1 cut(s) 671
BstMBI GATC 6 cut(s) 622, 847, 1089, 1448, 1480, 1693
BstMWI GCNNNNNNNGC 5 cut(s) 86, 584, 593, 770, 902
BstNI CCWGG 7 cut(s) 189, 345, 618, 816, 1263, 1539, 1578
BstNSI RCATGY 2 cut(s) 407, 884
BstSCI CCNGG 9 cut(s) 187, 343, 616, 814, 1067, 1068, 1261, 1537, 1576
BstSFI CTRYAG 2 cut(s) 628, 1667
BstV2I GAAGAC 1 cut(s) 1261
BstX2I RGATCY 2 cut(s) 1480, 1693
BstXI CCANNNNNNTGG 3 cut(s) 275, 1545, 1584
BstYI RGATCY 2 cut(s) 1480, 1693
BstZ17I GTATAC 1 cut(s) 1259
Bsu15I ATCGAT 1 cut(s) 1092
BsuRI GGCC 2 cut(s) 180, 819
BsuTUI ATCGAT 1 cut(s) 1092
BtgI CCRYGG 2 cut(s) 29, 299
BtrI CACGTC 1 cut(s) 1230
BtsCI GGATG 5 cut(s) 336, 835, 933, 1408, 1550
BtsI GCAGTG 3 cut(s) 335, 927, 1664
BtsIMutI CAGTG 8 cut(s) 141, 268, 335, 429, 927, 1305, 1594, 1664
Cac8I GCNNGC 5 cut(s) 405, 558, 862, 1192, 1242
CaiI CAGNNNCTG 2 cut(s) 95, 556
CciI TCATGA 1 cut(s) 109
Cfr13I GGNCC 7 cut(s) 191, 311, 812, 1072, 1166, 1405, 1661
Cfr9I CCCGGG 1 cut(s) 1068
ClaI ATCGAT 1 cut(s) 1092
CsiI ACCWGGT 1 cut(s) 1261
Csp6I GTAC 2 cut(s) 1364, 1429
CviAII CATG 8 cut(s) 30, 110, 275, 300, 404, 881, 1195, 1424
CviQI GTAC 2 cut(s) 1364, 1429
DdeI CTNAG 6 cut(s) 290, 422, 689, 897, 1332, 1401
DpnI GATC 6 cut(s) 624, 849, 1091, 1450, 1482, 1695
DpnII GATC 6 cut(s) 622, 847, 1089, 1448, 1480, 1693
DraIII CACNNNGTG 2 cut(s) 330, 396
EaeI YGGCCR 2 cut(s) 178, 817
Eam1104I CTCTTC 2 cut(s) 50, 134
EarI CTCTTC 2 cut(s) 50, 134
Eco130I CCWWGG 2 cut(s) 29, 299
Eco24I GRGCYC 1 cut(s) 1064
Eco47I GGWCC 7 cut(s) 191, 311, 812, 1072, 1166, 1405, 1661
Eco88I CYCGRG 1 cut(s) 1068
EcoO109I RGGNCCY 1 cut(s) 812
EcoRI GAATTC 1 cut(s) 657
EcoRII CCWGG 7 cut(s) 187, 343, 616, 814, 1261, 1537, 1576
EcoT14I CCWWGG 2 cut(s) 29, 299
EcoT22I ATGCAT 2 cut(s) 598, 1419
EcoT38I GRGCYC 1 cut(s) 1064
ErhI CCWWGG 2 cut(s) 29, 299
Esp3I CGTCTC 1 cut(s) 671
FaeI CATG 8 cut(s) 33, 113, 278, 303, 407, 884, 1198, 1427
FaqI GGGAC 2 cut(s) 318, 1137
FatI CATG 8 cut(s) 29, 109, 274, 299, 403, 880, 1194, 1423
FauI CCCGC 1 cut(s) 1187
FbaI TGATCA 1 cut(s) 847
FblI GTMKAC 1 cut(s) 1258
FokI GGATG 5 cut(s) 323, 842, 920, 1395, 1557
FriOI GRGCYC 1 cut(s) 1064
FspBI CTAG 6 cut(s) 77, 459, 542, 1191, 1359, 1643
GsaI CCCAGC 1 cut(s) 1691
GsuI CTGGAG 1 cut(s) 1281
HaeIII GGCC 2 cut(s) 180, 819
HapII CCGG 1 cut(s) 1069
Hin1II CATG 8 cut(s) 33, 113, 278, 303, 407, 884, 1198, 1427
HinfI GANTC 6 cut(s) 70, 218, 682, 693, 798, 1607
HpaII CCGG 1 cut(s) 1069
HphI GGTGA 4 cut(s) 530, 632, 721, 1264
Hpy166II GTNNAC 2 cut(s) 1259, 1364
Hpy188I TCNGA 5 cut(s) 209, 592, 891, 900, 1053
Hpy188III TCNNGA 6 cut(s) 67, 110, 377, 550, 688, 1452
Hpy8I GTNNAC 2 cut(s) 1259, 1364
HpyAV CCTTC 6 cut(s) 65, 73, 380, 490, 1024, 1074
HpyCH4III ACNGT 8 cut(s) 172, 235, 433, 652, 723, 754, 1141, 1598
HpyCH4IV ACGT 1 cut(s) 1229
HpyF10VI GCNNNNNNNGC 5 cut(s) 86, 584, 593, 770, 902
HpyF3I CTNAG 6 cut(s) 290, 422, 689, 897, 1332, 1401
HpySE526I ACGT 1 cut(s) 1229
Hsp92II CATG 8 cut(s) 33, 113, 278, 303, 407, 884, 1198, 1427
KpnI GGTACC 1 cut(s) 1432
Ksp22I TGATCA 1 cut(s) 847
Kzo9I GATC 6 cut(s) 622, 847, 1089, 1448, 1480, 1693
LmnI GCTCC 4 cut(s) 347, 440, 575, 641
LweI GCATC 5 cut(s) 583, 623, 757, 1426, 1581
MabI ACCWGGT 1 cut(s) 1261
MaeI CTAG 6 cut(s) 77, 459, 542, 1191, 1359, 1643
MaeII ACGT 1 cut(s) 1229
MaeIII GTNAC 5 cut(s) 235, 322, 1005, 1393, 1598
MalI GATC 6 cut(s) 624, 849, 1091, 1450, 1482, 1695
MboI GATC 6 cut(s) 622, 847, 1089, 1448, 1480, 1693
MboII GAAGA 6 cut(s) 37, 151, 503, 718, 1261, 1412
MflI RGATCY 2 cut(s) 1480, 1693
MhlI GDGCHC 2 cut(s) 580, 1064
MlsI TGGCCA 2 cut(s) 180, 819
MluNI TGGCCA 2 cut(s) 180, 819
MlyI GAGTC 2 cut(s) 64, 792
Mox20I TGGCCA 2 cut(s) 180, 819
Mph1103I ATGCAT 2 cut(s) 598, 1419
MscI TGGCCA 2 cut(s) 180, 819
MseI TTAA 4 cut(s) 1131, 1235, 1494, 1708
MslI CAYNNNNRTG 4 cut(s) 108, 273, 1422, 1437
Msp20I TGGCCA 2 cut(s) 180, 819
MspA1I CMGCKG 1 cut(s) 92
MspI CCGG 1 cut(s) 1069
MspR9I CCNGG 9 cut(s) 189, 345, 618, 816, 1069, 1070, 1263, 1539, 1578
Mva1269I GAATGC 2 cut(s) 563, 907
MvaI CCWGG 7 cut(s) 189, 345, 618, 816, 1263, 1539, 1578
MwoI GCNNNNNNNGC 5 cut(s) 86, 584, 593, 770, 902
NciI CCSGG 2 cut(s) 1069, 1070
NcoI CCATGG 2 cut(s) 29, 299
NdeII GATC 6 cut(s) 622, 847, 1089, 1448, 1480, 1693
NheI GCTAGC 1 cut(s) 1190
NlaIII CATG 8 cut(s) 33, 113, 278, 303, 407, 884, 1198, 1427
NlaIV GGNNCC 5 cut(s) 349, 442, 536, 1073, 1430
NmuCI GTSAC 3 cut(s) 322, 1393, 1598
NsiI ATGCAT 2 cut(s) 598, 1419
NspI RCATGY 2 cut(s) 407, 884
PaeI GCATGC 1 cut(s) 407
PagI TCATGA 1 cut(s) 109
PciI ACATGT 1 cut(s) 880
PctI GAATGC 2 cut(s) 563, 907
PfeI GAWTC 4 cut(s) 218, 682, 693, 1607
PflMI CCANNNNNTGG 1 cut(s) 556
PleI GAGTC 2 cut(s) 64, 792
PpsI GAGTC 2 cut(s) 64, 792
PpuMI RGGWCCY 1 cut(s) 812
PscI ACATGT 1 cut(s) 880
Psp5II RGGWCCY 1 cut(s) 812
Psp6I CCWGG 7 cut(s) 187, 343, 616, 814, 1261, 1537, 1576
PspFI CCCAGC 1 cut(s) 1687
PspGI CCWGG 7 cut(s) 187, 343, 616, 814, 1261, 1537, 1576
PspN4I GGNNCC 5 cut(s) 349, 442, 536, 1073, 1430
PspPI GGNCC 7 cut(s) 191, 311, 812, 1072, 1166, 1405, 1661
PspPPI RGGWCCY 1 cut(s) 812
PstI CTGCAG 1 cut(s) 1671
PstNI CAGNNNCTG 2 cut(s) 95, 556
PsuI RGATCY 2 cut(s) 1480, 1693
PvuII CAGCTG 1 cut(s) 92
RsaI GTAC 2 cut(s) 1365, 1430
RsaNI GTAC 2 cut(s) 1364, 1429
RseI CAYNNNNRTG 4 cut(s) 108, 273, 1422, 1437
SaqAI TTAA 4 cut(s) 1131, 1235, 1494, 1708
Sau3AI GATC 6 cut(s) 622, 847, 1089, 1448, 1480, 1693
Sau96I GGNCC 7 cut(s) 191, 311, 812, 1072, 1166, 1405, 1661
SchI GAGTC 2 cut(s) 64, 792
ScrFI CCNGG 9 cut(s) 189, 345, 618, 816, 1069, 1070, 1263, 1539, 1578
SduI GDGCHC 2 cut(s) 580, 1064
SexAI ACCWGGT 1 cut(s) 1261
SfaNI GCATC 5 cut(s) 583, 623, 757, 1426, 1581
SfcI CTRYAG 2 cut(s) 628, 1667
SinI GGWCC 7 cut(s) 191, 311, 812, 1072, 1166, 1405, 1661
SmaI CCCGGG 1 cut(s) 1070
SmiMI CAYNNNNRTG 4 cut(s) 108, 273, 1422, 1437
SphI GCATGC 1 cut(s) 407
SsiI CCGC 3 cut(s) 364, 1032, 1180
SspMI CTAG 6 cut(s) 77, 459, 542, 1191, 1359, 1643
StyD4I CCNGG 9 cut(s) 187, 343, 616, 814, 1067, 1068, 1261, 1537, 1576
StyI CCWWGG 2 cut(s) 29, 299
TaaI ACNGT 8 cut(s) 172, 235, 433, 652, 723, 754, 1141, 1598
TaiI ACGT 1 cut(s) 1232
TaqI TCGA 2 cut(s) 1092, 1558
TatI WGTACW 1 cut(s) 1363
TfiI GAWTC 4 cut(s) 218, 682, 693, 1607
Tru1I TTAA 4 cut(s) 1131, 1235, 1494, 1708
Tru9I TTAA 4 cut(s) 1131, 1235, 1494, 1708
TscAI CASTG 8 cut(s) 141, 275, 335, 436, 934, 1305, 1601, 1671
TseFI GTSAC 3 cut(s) 322, 1393, 1598
Tsp45I GTSAC 3 cut(s) 322, 1393, 1598
TspDTI ATGAA 4 cut(s) 126, 1099, 1211, 1412
TspGWI ACGGA 1 cut(s) 842
TspMI CCCGGG 1 cut(s) 1068
TspRI CASTG 8 cut(s) 141, 275, 335, 436, 934, 1305, 1601, 1671
Van91I CCANNNNNTGG 1 cut(s) 556
VpaK11BI GGWCC 7 cut(s) 191, 311, 812, 1072, 1166, 1405, 1661
XapI RAATTY 5 cut(s) 113, 196, 500, 657, 1490
XceI RCATGY 2 cut(s) 407, 884
XmaI CCCGGG 1 cut(s) 1068
XmiI GTMKAC 1 cut(s) 1258
XspI CTAG 6 cut(s) 77, 459, 542, 1191, 1359, 1643
Zsp2I ATGCAT 2 cut(s) 598, 1419
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.