DNA-binding domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G06920 AT2G30400 |
| fragaria_vesca | FvH4_3g40310 |
| malus_domestica | MD03G1053600.v1.1 MD11G1055200.v1.1 |
| prunus_persica | Prupe.6G042700_v2.0.a1 |
| pyrus_communis | pycom03g04250 pycom11g04500 |
| rosa_chinensis | RchiOBHm_Chr5g0072651 |
| rosa_laevigata | RLG00000036321 |
| rosa_multiflora | Rmu_co8479013.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00008500 |
| rosa_rugosa | Rorug05G0419000 |
| rosa_samantha | Rh5AG476000 Rh5BG496100 Rh5CG519900 Rh5DG508600 |
| rosa_wichuraiana | Rw5G044200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 510 |
| AclWI | GGATC | 1 cut(s) | 792 |
| AcsI | RAATTY | 1 cut(s) | 424 |
| AcuI | CTGAAG | 1 cut(s) | 866 |
| AfaI | GTAC | 2 cut(s) | 164, 694 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 684, 840, 973 |
| AgsI | TTSAA | 6 cut(s) | 414, 473, 531, 709, 812, 982 |
| AjnI | CCWGG | 1 cut(s) | 158 |
| AluBI | AGCT | 5 cut(s) | 58, 302, 366, 616, 939 |
| AluI | AGCT | 5 cut(s) | 58, 302, 366, 616, 939 |
| Alw26I | GTCTC | 2 cut(s) | 393, 735 |
| AlwI | GGATC | 1 cut(s) | 792 |
| AoxI | GGCC | 2 cut(s) | 355, 663 |
| ApeKI | GCWGC | 1 cut(s) | 886 |
| ApoI | RAATTY | 1 cut(s) | 424 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 456 |
| AspS9I | GGNCC | 1 cut(s) | 1042 |
| AsuHPI | GGTGA | 2 cut(s) | 213, 309 |
| AvaII | GGWCC | 1 cut(s) | 1042 |
| AxyI | CCTNAGG | 1 cut(s) | 352 |
| BbvI | GCAGC | 1 cut(s) | 898 |
| BccI | CCATC | 3 cut(s) | 153, 469, 581 |
| BciT130I | CCWGG | 1 cut(s) | 160 |
| BciVI | GTATCC | 1 cut(s) | 716 |
| BclI | TGATCA | 1 cut(s) | 652 |
| BcoDI | GTCTC | 2 cut(s) | 393, 735 |
| BfaI | CTAG | 1 cut(s) | 900 |
| BfmI | CTRYAG | 2 cut(s) | 10, 514 |
| BfuI | GTATCC | 1 cut(s) | 716 |
| BisI | GCNGC | 1 cut(s) | 887 |
| BlsI | GCNGC | 1 cut(s) | 888 |
| BmcAI | AGTACT | 1 cut(s) | 694 |
| Bme1390I | CCNGG | 1 cut(s) | 160 |
| Bme18I | GGWCC | 1 cut(s) | 1042 |
| BmgT120I | GGNCC | 1 cut(s) | 1042 |
| BmrFI | CCNGG | 1 cut(s) | 160 |
| BmsI | GCATC | 1 cut(s) | 235 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 488, 520 |
| BpuEI | CTTGAG | 1 cut(s) | 1057 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 82, 112, 115, 145, 784, 814 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 684, 840, 973 |
| Bse118I | RCCGGY | 1 cut(s) | 833 |
| Bse1I | ACTGG | 2 cut(s) | 481, 727 |
| Bse21I | CCTNAGG | 1 cut(s) | 352 |
| BseBI | CCWGG | 1 cut(s) | 160 |
| BseGI | GGATG | 2 cut(s) | 461, 698 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 684, 840, 973 |
| BseMII | CTCAG | 5 cut(s) | 255, 366, 375, 486, 618 |
| BseNI | ACTGG | 2 cut(s) | 481, 727 |
| BseXI | GCAGC | 1 cut(s) | 898 |
| BshFI | GGCC | 2 cut(s) | 357, 665 |
| BsiSI | CCGG | 1 cut(s) | 834 |
| BslFI | GGGAC | 1 cut(s) | 989 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 684, 840, 973 |
| BsmAI | GTCTC | 2 cut(s) | 393, 735 |
| BsmFI | GGGAC | 1 cut(s) | 989 |
| BsnI | GGCC | 2 cut(s) | 357, 665 |
| Bsp143I | GATC | 4 cut(s) | 600, 652, 784, 1087 |
| BspANI | GGCC | 2 cut(s) | 357, 665 |
| BspCNI | CTCAG | 5 cut(s) | 254, 365, 376, 487, 617 |
| BspHI | TCATGA | 3 cut(s) | 439, 448, 655 |
| BspMAI | CTGCAG | 1 cut(s) | 518 |
| BspPI | GGATC | 1 cut(s) | 792 |
| BsrFI | RCCGGY | 1 cut(s) | 833 |
| BsrI | ACTGG | 2 cut(s) | 481, 727 |
| BssAI | RCCGGY | 1 cut(s) | 833 |
| BssMI | GATC | 4 cut(s) | 600, 652, 784, 1087 |
| Bst2UI | CCWGG | 1 cut(s) | 160 |
| BstC8I | GCNNGC | 1 cut(s) | 871 |
| BstDEI | CTNAG | 7 cut(s) | 241, 352, 384, 495, 604, 1144, 1152 |
| BstF5I | GGATG | 2 cut(s) | 461, 698 |
| BstKTI | GATC | 4 cut(s) | 603, 655, 787, 1090 |
| BstMAI | GTCTC | 2 cut(s) | 393, 735 |
| BstMBI | GATC | 4 cut(s) | 600, 652, 784, 1087 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 245, 363 |
| BstNI | CCWGG | 1 cut(s) | 160 |
| BstSCI | CCNGG | 1 cut(s) | 158 |
| BstSFI | CTRYAG | 2 cut(s) | 10, 514 |
| BstV1I | GCAGC | 1 cut(s) | 898 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 45, 488, 1036 |
| Bsu36I | CCTNAGG | 1 cut(s) | 352 |
| BsuI | GTATCC | 1 cut(s) | 716 |
| BsuRI | GGCC | 2 cut(s) | 357, 665 |
| BtsCI | GGATG | 2 cut(s) | 461, 698 |
| Cac8I | GCNNGC | 1 cut(s) | 871 |
| CciI | TCATGA | 3 cut(s) | 439, 448, 655 |
| Cfr10I | RCCGGY | 1 cut(s) | 833 |
| Cfr13I | GGNCC | 1 cut(s) | 1042 |
| CsiI | ACCWGGT | 1 cut(s) | 158 |
| Csp6I | GTAC | 2 cut(s) | 163, 693 |
| CviAII | CATG | 9 cut(s) | 371, 431, 440, 449, 553, 584, 598, 656, 1085 |
| CviQI | GTAC | 2 cut(s) | 163, 693 |
| DdeI | CTNAG | 7 cut(s) | 241, 352, 384, 495, 604, 1144, 1152 |
| DpnI | GATC | 4 cut(s) | 602, 654, 786, 1089 |
| DpnII | GATC | 4 cut(s) | 600, 652, 784, 1087 |
| Eco47I | GGWCC | 1 cut(s) | 1042 |
| Eco57I | CTGAAG | 1 cut(s) | 866 |
| Eco81I | CCTNAGG | 1 cut(s) | 352 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1042 |
| EcoRII | CCWGG | 1 cut(s) | 158 |
| FaeI | CATG | 9 cut(s) | 374, 434, 443, 452, 556, 587, 601, 659, 1088 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 787, 819 |
| FaqI | GGGAC | 1 cut(s) | 989 |
| FatI | CATG | 9 cut(s) | 370, 430, 439, 448, 552, 583, 597, 655, 1084 |
| FbaI | TGATCA | 1 cut(s) | 652 |
| Fnu4HI | GCNGC | 1 cut(s) | 887 |
| FokI | GGATG | 2 cut(s) | 448, 685 |
| Fsp4HI | GCNGC | 1 cut(s) | 887 |
| FspBI | CTAG | 1 cut(s) | 900 |
| GluI | GCNGC | 1 cut(s) | 887 |
| HaeIII | GGCC | 2 cut(s) | 357, 665 |
| HapII | CCGG | 1 cut(s) | 834 |
| Hin1II | CATG | 9 cut(s) | 374, 434, 443, 452, 556, 587, 601, 659, 1088 |
| HincII | GTYRAC | 1 cut(s) | 279 |
| HindII | GTYRAC | 1 cut(s) | 279 |
| HinfI | GANTC | 7 cut(s) | 386, 457, 624, 671, 986, 1025, 1148 |
| HpaII | CCGG | 1 cut(s) | 834 |
| HphI | GGTGA | 2 cut(s) | 213, 309 |
| Hpy166II | GTNNAC | 4 cut(s) | 279, 307, 334, 675 |
| Hpy188I | TCNGA | 9 cut(s) | 20, 28, 244, 466, 496, 538, 607, 934, 1147 |
| Hpy188III | TCNNGA | 7 cut(s) | 257, 383, 440, 449, 628, 656, 742 |
| Hpy8I | GTNNAC | 4 cut(s) | 279, 307, 334, 675 |
| HpyAV | CCTTC | 7 cut(s) | 264, 288, 324, 557, 703, 775, 1055 |
| HpyCH4V | TGCA | 4 cut(s) | 248, 516, 869, 944 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 245, 363 |
| HpyF3I | CTNAG | 7 cut(s) | 241, 352, 384, 495, 604, 1144, 1152 |
| Hsp92II | CATG | 9 cut(s) | 374, 434, 443, 452, 556, 587, 601, 659, 1088 |
| Ksp22I | TGATCA | 1 cut(s) | 652 |
| Kzo9I | GATC | 4 cut(s) | 600, 652, 784, 1087 |
| Lsp1109I | GCAGC | 1 cut(s) | 898 |
| LweI | GCATC | 1 cut(s) | 235 |
| MabI | ACCWGGT | 1 cut(s) | 158 |
| MaeI | CTAG | 1 cut(s) | 900 |
| MaeIII | GTNAC | 1 cut(s) | 5 |
| MalI | GATC | 4 cut(s) | 602, 654, 786, 1089 |
| MboI | GATC | 4 cut(s) | 600, 652, 784, 1087 |
| MboII | GAAGA | 3 cut(s) | 402, 519, 767 |
| MluCI | AATT | 5 cut(s) | 378, 424, 452, 608, 704 |
| MlyI | GAGTC | 3 cut(s) | 395, 680, 980 |
| MmeI | TCCRAC | 1 cut(s) | 854 |
| MroXI | GAANNNNTTC | 1 cut(s) | 456 |
| MseI | TTAA | 2 cut(s) | 549, 683 |
| MslI | CAYNNNNRTG | 1 cut(s) | 551 |
| MspI | CCGG | 1 cut(s) | 834 |
| MspR9I | CCNGG | 1 cut(s) | 160 |
| MvaI | CCWGG | 1 cut(s) | 160 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 245, 363 |
| NdeII | GATC | 4 cut(s) | 600, 652, 784, 1087 |
| NlaIII | CATG | 9 cut(s) | 374, 434, 443, 452, 556, 587, 601, 659, 1088 |
| PagI | TCATGA | 3 cut(s) | 439, 448, 655 |
| PdmI | GAANNNNTTC | 1 cut(s) | 456 |
| PfeI | GAWTC | 4 cut(s) | 457, 624, 1025, 1148 |
| PkrI | GCNGC | 1 cut(s) | 888 |
| PleI | GAGTC | 3 cut(s) | 394, 679, 980 |
| PpsI | GAGTC | 3 cut(s) | 394, 679, 980 |
| PpuMI | RGGWCCY | 1 cut(s) | 1042 |
| PsiI | TTATAA | 1 cut(s) | 510 |
| Psp5II | RGGWCCY | 1 cut(s) | 1042 |
| Psp6I | CCWGG | 1 cut(s) | 158 |
| PspGI | CCWGG | 1 cut(s) | 158 |
| PspPI | GGNCC | 1 cut(s) | 1042 |
| PspPPI | RGGWCCY | 1 cut(s) | 1042 |
| PstI | CTGCAG | 1 cut(s) | 518 |
| RsaI | GTAC | 2 cut(s) | 164, 694 |
| RsaNI | GTAC | 2 cut(s) | 163, 693 |
| RseI | CAYNNNNRTG | 1 cut(s) | 551 |
| SaqAI | TTAA | 2 cut(s) | 549, 683 |
| SatI | GCNGC | 1 cut(s) | 887 |
| Sau3AI | GATC | 4 cut(s) | 600, 652, 784, 1087 |
| Sau96I | GGNCC | 1 cut(s) | 1042 |
| ScaI | AGTACT | 1 cut(s) | 694 |
| SchI | GAGTC | 3 cut(s) | 395, 680, 980 |
| ScrFI | CCNGG | 1 cut(s) | 160 |
| SexAI | ACCWGGT | 1 cut(s) | 158 |
| SfaNI | GCATC | 1 cut(s) | 235 |
| SfcI | CTRYAG | 2 cut(s) | 10, 514 |
| SinI | GGWCC | 1 cut(s) | 1042 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 551 |
| SmlI | CTYRAG | 1 cut(s) | 1072 |
| SmoI | CTYRAG | 1 cut(s) | 1072 |
| Sse9I | AATT | 5 cut(s) | 378, 424, 452, 608, 704 |
| SspMI | CTAG | 1 cut(s) | 900 |
| StyD4I | CCNGG | 1 cut(s) | 158 |
| TaqI | TCGA | 5 cut(s) | 622, 847, 989, 1107, 1122 |
| TasI | AATT | 5 cut(s) | 378, 424, 452, 608, 704 |
| TatI | WGTACW | 1 cut(s) | 692 |
| TfiI | GAWTC | 4 cut(s) | 457, 624, 1025, 1148 |
| Tru1I | TTAA | 2 cut(s) | 549, 683 |
| Tru9I | TTAA | 2 cut(s) | 549, 683 |
| TseI | GCWGC | 1 cut(s) | 886 |
| TspDTI | ATGAA | 7 cut(s) | 219, 437, 447, 465, 569, 656, 687 |
| VpaK11BI | GGWCC | 1 cut(s) | 1042 |
| XapI | RAATTY | 1 cut(s) | 424 |
| XmnI | GAANNNNTTC | 1 cut(s) | 456 |
| XspI | CTAG | 1 cut(s) | 900 |
| ZrmI | AGTACT | 1 cut(s) | 694 |