RLG00000036675
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
83276530 .. 83277735
1206 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000036675

Sequence Viewer

Length: 1206 bp
ATGGAGGAGATTCCATCACCGGAACTCAACCTCGACACCCTCAAGGCGATCAGAGTCCTCGGCAAGGGAGCCATGGGGACCGTCTTCCTGGTCCACGACCCGAAATCCGACCCGTCCGCCACCTTCCCTTTCGCTCTCAAAGTCGTTGACAAGTCCTTGCTCTGCACCAAGCTCGACGCCGAGCGCCGAGCCCGGTGGGAGGTCCAGGTCCTGACCCGACTCTCCGGCCCGAACCCGCACCCGTTTCTGCCTTCTCTTCTAGGTTCGTTCAACTGCGACGAGTATTTGGGCTGGGCCGTCCCTTACTGCCCCGGCGGCGACCTCAACGTCCTCCGCTACCGCCAAAACGACCGCGTTTTCTCCCAAACGGTGATCCGTTTCTATCTGGCGGAGATCGTCTGCGCGCTGGAGCACCTCCACAGCATGGGGATCGCTTACCGGGATTTAAAGCCAGAGAACGTGCTGATCCAACAGTCGGGTCACGTGACCCTCACGGACTTCGACCTTTCCAGAAGCCTGAAACACCAGGCCGTTAAAACCGTCGTGGACGACGCGCCGGAGATCCGCCGCAAACACCGCAGGAACCTCACGCGCTGGATCAGCATTATCAACGAGAACAACAAGGCCGGGTTGAAGAAGGCCAAGTCTGCCCGGGTCAGCCCGGTCAGCCGCCGCAAGCCGAGCTTCTCCGACAACGGCGAGCGGGCCAACTCGTTCGTCGGCACCGAGGAGTACGTCTCCCCCGAGGTCGTCCGCGGCGAGGGTCACGAGTTCGCGGTGGACTGGTGGGCCCTAGGGATTCTCACCTACGAGTGCCTCTACGGGACGACGCCGTTTAAGGGGAAAAGCCGGAAGGAGACGTTCCGGAACGTGCTGACGAAGACGCCGGAGTTCGTGGGGAAACGGACGGCGCTGACGGACTTGATCGAACGGCTGCTGCACAAGGACCCCACCAGGCGGTTGGGGTACGTGAGAGGCGCGTGCGAGATCAAAGAGCATGAGTTTTTTCGCGGGGTGAGGTGGGACCTACTAACGGAGGTGTCACGGGCTCCGTTTATTCCGCCGAGGGACGAGGACGGAGACGTAACGGAGAGCAGGGCCGCCTCGGCGAGATGTGGGGCGAGCGTGAGAGAGTATTTCCAAAAGTTACGGGCTCCTCCGCCGTCAATGCCGCCGTCGCCGGATTGTCAGTTAGCAGAGTTTTGA

Protein Analysis

402

Amino Acids

45.41

Weight (kDa)

9.0

Isoelectric Point (pI)

49.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 15 - 179 2.3e-14 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 16 - 182 2.5e-28 Protein kinase domain
Pkinase PF00069 232 - 336 1.2e-19 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010942)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 326
AccB1I GGYRCC 1 cut(s) 722
AccB7I CCANNNNNTGG 1 cut(s) 424
AccBSI CCGCTC 1 cut(s) 703
AccII CGCG 8 cut(s) 354, 404, 554, 592, 756, 776, 980, 1011
AccIII TCCGGA 1 cut(s) 864
AclWI GGATC 5 cut(s) 367, 437, 460, 556, 605
AcvI CACGTG 1 cut(s) 484
AcyI GRCGYC 3 cut(s) 177, 830, 884
AfaI GTAC 2 cut(s) 734, 968
AfiI CCNNNNNNNGG 8 cut(s) 64, 199, 424, 475, 760, 839, 957, 1033
AgsI TTSAA 2 cut(s) 271, 634
AjnI CCWGG 4 cut(s) 87, 204, 525, 953
AluBI AGCT 2 cut(s) 172, 684
AluI AGCT 2 cut(s) 172, 684
Alw21I GWGCWC 1 cut(s) 414
Alw26I GTCTC 3 cut(s) 742, 851, 1074
AlwI GGATC 5 cut(s) 367, 437, 460, 556, 605
AlwNI CAGNNNCTG 1 cut(s) 211
Ama87I CYCGRG 2 cut(s) 651, 743
Aor13HI TCCGGA 1 cut(s) 864
AoxI GGCC 8 cut(s) 226, 294, 528, 624, 639, 705, 789, 1098
ApaI GGGCCC 1 cut(s) 793
ApeKI GCWGC 2 cut(s) 934, 937
AspA2I CCTAGG 1 cut(s) 793
AspLEI GCGC 7 cut(s) 186, 404, 406, 556, 594, 913, 980
AsuC2I CCSGG 7 cut(s) 193, 312, 440, 628, 652, 653, 662
AsuHPI GGTGA 4 cut(s) 9, 382, 796, 1027
AvaI CYCGRG 2 cut(s) 651, 743
AvaII GGWCC 6 cut(s) 78, 91, 202, 208, 946, 1024
AvrII CCTAGG 1 cut(s) 793
BaeGI GKGCMC 1 cut(s) 793
BanI GGYRCC 1 cut(s) 722
BanII GRGCYC 4 cut(s) 193, 793, 1051, 1156
BauI CACGAG 1 cut(s) 767
BbrPI CACGTG 1 cut(s) 484
BbsI GAAGAC 2 cut(s) 76, 887
Bbv12I GWGCWC 1 cut(s) 414
BbvI GCAGC 2 cut(s) 921, 924
BccI CCATC 1 cut(s) 22
BceAI ACGGC 8 cut(s) 281, 515, 712, 817, 924, 947, 1147, 1159
BcgI CGANNNNNNTGC 4 cut(s) 154, 188, 412, 446
BciT130I CCWGG 4 cut(s) 89, 206, 527, 955
BcnI CCSGG 7 cut(s) 193, 312, 440, 628, 652, 653, 662
BcoDI GTCTC 3 cut(s) 742, 851, 1074
BfaI CTAG 2 cut(s) 260, 794
BfoI RGCGCY 2 cut(s) 187, 914
BglI GCCNNNNNGGC 2 cut(s) 315, 1106
BisI GCNGC 9 cut(s) 316, 568, 670, 673, 757, 935, 938, 1101, 1172
BlnI CCTAGG 1 cut(s) 793
BlsI GCNGC 9 cut(s) 317, 569, 671, 674, 758, 936, 939, 1102, 1173
Bme18I GGWCC 6 cut(s) 78, 91, 202, 208, 946, 1024
BmeT110I CYCGRG 2 cut(s) 651, 743
BmiI GGNNCC 9 cut(s) 70, 79, 584, 724, 791, 948, 1025, 1050, 1155
BpiI GAAGAC 2 cut(s) 76, 887
BplI GAGNNNNNCTC 2 cut(s) 722, 754
BpmI CTGGAG 1 cut(s) 428
BpuEI CTTGAG 1 cut(s) 26
BpuMI CCSGG 7 cut(s) 193, 312, 440, 628, 652, 653, 662
BsaAI YACGTR 2 cut(s) 484, 970
BsaHI GRCGYC 3 cut(s) 177, 830, 884
BsaWI WCCGGW 2 cut(s) 19, 864
Bsc4I CCNNNNNNNGG 8 cut(s) 64, 199, 424, 475, 760, 839, 957, 1033
Bse1I ACTGG 1 cut(s) 788
BseAI TCCGGA 1 cut(s) 864
BseBI CCWGG 4 cut(s) 89, 206, 527, 955
BseLI CCNNNNNNNGG 8 cut(s) 64, 199, 424, 475, 760, 839, 957, 1033
BseNI ACTGG 1 cut(s) 788
BsePI GCGCGC 1 cut(s) 402
BseRI GAGGAG 3 cut(s) 20, 743, 1146
BseSI GKGCMC 1 cut(s) 793
BseXI GCAGC 2 cut(s) 921, 924
BseYI CCCAGC 1 cut(s) 291
BsgI GTGCAG 2 cut(s) 148, 923
Bsh1236I CGCG 8 cut(s) 354, 404, 554, 592, 756, 776, 980, 1011
Bsh1285I CGRYCG 1 cut(s) 352
BshFI GGCC 8 cut(s) 228, 296, 530, 626, 641, 707, 791, 1100
BshNI GGYRCC 1 cut(s) 722
BsiEI CGRYCG 1 cut(s) 352
BsiHKAI GWGCWC 1 cut(s) 414
BsiHKCI CYCGRG 2 cut(s) 651, 743
BslFI GGGAC 5 cut(s) 91, 284, 838, 1037, 1082
BslI CCNNNNNNNGG 8 cut(s) 64, 199, 424, 475, 760, 839, 957, 1033
BsmAI GTCTC 3 cut(s) 742, 851, 1074
BsmBI CGTCTC 3 cut(s) 742, 851, 1074
BsmFI GGGAC 5 cut(s) 91, 284, 838, 1037, 1082
BsnI GGCC 8 cut(s) 228, 296, 530, 626, 641, 707, 791, 1100
BsoBI CYCGRG 2 cut(s) 651, 743
Bsp120I GGGCCC 1 cut(s) 789
Bsp1286I GDGCHC 5 cut(s) 193, 414, 793, 1051, 1156
Bsp13I TCCGGA 1 cut(s) 864
Bsp143I GATC 9 cut(s) 48, 372, 393, 429, 465, 561, 597, 924, 987
Bsp19I CCATGG 1 cut(s) 72
BspANI GGCC 8 cut(s) 228, 296, 530, 626, 641, 707, 791, 1100
BspEI TCCGGA 1 cut(s) 864
BspFNI CGCG 8 cut(s) 354, 404, 554, 592, 756, 776, 980, 1011
BspLI GGNNCC 9 cut(s) 70, 79, 584, 724, 791, 948, 1025, 1050, 1155
BspPI GGATC 5 cut(s) 367, 437, 460, 556, 605
BspT107I GGYRCC 1 cut(s) 722
BsrBI CCGCTC 1 cut(s) 703
BsrI ACTGG 1 cut(s) 788
BssHII GCGCGC 1 cut(s) 402
BssMI GATC 9 cut(s) 48, 372, 393, 429, 465, 561, 597, 924, 987
BssNI GRCGYC 3 cut(s) 177, 830, 884
BssSI CACGAG 1 cut(s) 767
BssT1I CCWWGG 2 cut(s) 72, 793
Bst2BI CACGAG 1 cut(s) 767
Bst2UI CCWGG 4 cut(s) 89, 206, 527, 955
Bst4CI ACNGT 4 cut(s) 82, 370, 474, 541
Bst6I CTCTTC 1 cut(s) 261
BstACI GRCGYC 3 cut(s) 177, 830, 884
BstBAI YACGTR 2 cut(s) 484, 970
BstC8I GCNNGC 6 cut(s) 404, 677, 701, 705, 982, 1123
BstDSI CCRYGG 2 cut(s) 72, 754
BstENI CCTNNNNNAGG 1 cut(s) 62
BstFNI CGCG 8 cut(s) 354, 404, 554, 592, 756, 776, 980, 1011
BstH2I RGCGCY 2 cut(s) 187, 914
BstHHI GCGC 7 cut(s) 186, 404, 406, 556, 594, 913, 980
BstKTI GATC 9 cut(s) 51, 375, 396, 432, 468, 564, 600, 927, 990
BstMAI GTCTC 3 cut(s) 742, 851, 1074
BstMBI GATC 9 cut(s) 48, 372, 393, 429, 465, 561, 597, 924, 987
BstMCI CGRYCG 1 cut(s) 352
BstMWI GCNNNNNNNGC 9 cut(s) 315, 576, 600, 647, 666, 681, 1106, 1168, 1177
BstNI CCWGG 4 cut(s) 89, 206, 527, 955
BstSLI GKGCMC 1 cut(s) 793
BstUI CGCG 8 cut(s) 354, 404, 554, 592, 756, 776, 980, 1011
BstV1I GCAGC 2 cut(s) 921, 924
BstV2I GAAGAC 2 cut(s) 76, 887
BstX2I RGATCY 1 cut(s) 561
BstXI CCANNNNNNTGG 1 cut(s) 961
BstYI RGATCY 1 cut(s) 561
BsuRI GGCC 8 cut(s) 228, 296, 530, 626, 641, 707, 791, 1100
BtgI CCRYGG 2 cut(s) 72, 754
Cac8I GCNNGC 6 cut(s) 404, 677, 701, 705, 982, 1123
CaiI CAGNNNCTG 1 cut(s) 211
CfoI GCGC 7 cut(s) 186, 404, 406, 556, 594, 913, 980
Cfr42I CCGCGG 1 cut(s) 757
Cfr9I CCCGGG 1 cut(s) 651
CseI GACGC 4 cut(s) 185, 560, 838, 892
Csp6I GTAC 2 cut(s) 733, 967
CviAII CATG 3 cut(s) 73, 424, 998
CviQI GTAC 2 cut(s) 733, 967
DpnI GATC 9 cut(s) 50, 374, 395, 431, 467, 563, 599, 926, 989
DpnII GATC 9 cut(s) 48, 372, 393, 429, 465, 561, 597, 924, 987
DraI TTTAAA 1 cut(s) 447
DrdI GACNNNNNNGTC 1 cut(s) 326
DseDI GACNNNNNNGTC 1 cut(s) 326
Eam1104I CTCTTC 1 cut(s) 261
EarI CTCTTC 1 cut(s) 261
EciI GGCGGA 5 cut(s) 106, 404, 554, 1050, 1149
Eco130I CCWWGG 2 cut(s) 72, 793
Eco24I GRGCYC 4 cut(s) 193, 793, 1051, 1156
Eco47I GGWCC 6 cut(s) 78, 91, 202, 208, 946, 1024
Eco72I CACGTG 1 cut(s) 484
Eco88I CYCGRG 2 cut(s) 651, 743
EcoNI CCTNNNNNAGG 1 cut(s) 62
EcoO109I RGGNCCY 4 cut(s) 208, 790, 946, 1024
EcoRII CCWGG 4 cut(s) 87, 204, 525, 953
EcoT14I CCWWGG 2 cut(s) 72, 793
EcoT38I GRGCYC 4 cut(s) 193, 793, 1051, 1156
ErhI CCWWGG 2 cut(s) 72, 793
Esp3I CGTCTC 3 cut(s) 742, 851, 1074
FaeI CATG 3 cut(s) 76, 427, 1001
FaiI YATR 3 cut(s) 74, 425, 999
FalI AAGNNNNNCTT 2 cut(s) 668, 700
FaqI GGGAC 5 cut(s) 91, 284, 838, 1037, 1082
FatI CATG 3 cut(s) 72, 423, 997
FauI CCCGC 3 cut(s) 243, 696, 1004
Fnu4HI GCNGC 9 cut(s) 316, 568, 670, 673, 757, 935, 938, 1101, 1172
FriOI GRGCYC 4 cut(s) 193, 793, 1051, 1156
Fsp4HI GCNGC 9 cut(s) 316, 568, 670, 673, 757, 935, 938, 1101, 1172
FspBI CTAG 2 cut(s) 260, 794
GlaI GCGC 7 cut(s) 185, 403, 405, 555, 593, 912, 979
GluI GCNGC 9 cut(s) 316, 568, 670, 673, 757, 935, 938, 1101, 1172
GsaI CCCAGC 1 cut(s) 295
GsuI CTGGAG 1 cut(s) 428
HaeII RGCGCY 2 cut(s) 187, 914
HaeIII GGCC 8 cut(s) 228, 296, 530, 626, 641, 707, 791, 1100
HgaI GACGC 4 cut(s) 185, 560, 838, 892
HhaI GCGC 7 cut(s) 186, 404, 406, 556, 594, 913, 980
Hin1I GRCGYC 3 cut(s) 177, 830, 884
Hin1II CATG 3 cut(s) 76, 427, 1001
Hin6I GCGC 7 cut(s) 184, 402, 404, 554, 592, 911, 978
HinP1I GCGC 7 cut(s) 184, 402, 404, 554, 592, 911, 978
HincII GTYRAC 1 cut(s) 148
HindII GTYRAC 1 cut(s) 148
HinfI GANTC 4 cut(s) 10, 54, 219, 799
HphI GGTGA 4 cut(s) 9, 382, 796, 1027
Hpy166II GTNNAC 4 cut(s) 94, 148, 547, 781
Hpy188I TCNGA 3 cut(s) 53, 109, 691
Hpy188III TCNNGA 4 cut(s) 211, 510, 767, 865
Hpy8I GTNNAC 4 cut(s) 94, 148, 547, 781
Hpy99I CGWCG 7 cut(s) 179, 281, 545, 554, 722, 832, 1180
HpyAV CCTTC 4 cut(s) 133, 261, 631, 847
HpyCH4III ACNGT 4 cut(s) 82, 370, 474, 541
HpyCH4IV ACGT 8 cut(s) 327, 459, 483, 735, 860, 870, 969, 1083
HpyCH4V TGCA 2 cut(s) 165, 940
HpyF10VI GCNNNNNNNGC 9 cut(s) 315, 576, 600, 647, 666, 681, 1106, 1168, 1177
HpySE526I ACGT 8 cut(s) 327, 459, 483, 735, 860, 870, 969, 1083
Hsp92I GRCGYC 3 cut(s) 177, 830, 884
Hsp92II CATG 3 cut(s) 76, 427, 1001
HspAI GCGC 7 cut(s) 184, 402, 404, 554, 592, 911, 978
Kpn2I TCCGGA 1 cut(s) 864
KspI CCGCGG 1 cut(s) 757
Kzo9I GATC 9 cut(s) 48, 372, 393, 429, 465, 561, 597, 924, 987
LmnI GCTCC 4 cut(s) 68, 409, 1054, 1159
Lsp1109I GCAGC 2 cut(s) 921, 924
MaeI CTAG 2 cut(s) 260, 794
MaeII ACGT 8 cut(s) 327, 459, 483, 735, 860, 870, 969, 1083
MaeIII GTNAC 6 cut(s) 479, 484, 764, 1041, 1084, 1146
MalI GATC 9 cut(s) 50, 374, 395, 431, 467, 563, 599, 926, 989
MbiI CCGCTC 1 cut(s) 703
MboI GATC 9 cut(s) 48, 372, 393, 429, 465, 561, 597, 924, 987
MboII GAAGA 4 cut(s) 76, 248, 646, 892
MflI RGATCY 1 cut(s) 561
MhlI GDGCHC 5 cut(s) 193, 414, 793, 1051, 1156
MlyI GAGTC 2 cut(s) 63, 213
MmeI TCCRAC 3 cut(s) 132, 493, 714
MroI TCCGGA 1 cut(s) 864
MseI TTAA 3 cut(s) 446, 534, 837
MspA1I CMGCKG 1 cut(s) 756
MvaI CCWGG 4 cut(s) 89, 206, 527, 955
MvnI CGCG 8 cut(s) 354, 404, 554, 592, 756, 776, 980, 1011
MwoI GCNNNNNNNGC 9 cut(s) 315, 576, 600, 647, 666, 681, 1106, 1168, 1177
NciI CCSGG 7 cut(s) 193, 312, 440, 628, 652, 653, 662
NcoI CCATGG 1 cut(s) 72
NdeII GATC 9 cut(s) 48, 372, 393, 429, 465, 561, 597, 924, 987
NlaIII CATG 3 cut(s) 76, 427, 1001
NlaIV GGNNCC 9 cut(s) 70, 79, 584, 724, 791, 948, 1025, 1050, 1155
NmeAIII GCCGAG 6 cut(s) 39, 205, 212, 705, 1085, 1089
NmuCI GTSAC 4 cut(s) 479, 484, 764, 1041
PauI GCGCGC 1 cut(s) 402
PcsI WCGNNNNNNNCGW 3 cut(s) 723, 741, 756
PfeI GAWTC 2 cut(s) 10, 799
PflMI CCANNNNNTGG 1 cut(s) 424
PkrI GCNGC 9 cut(s) 317, 569, 671, 674, 758, 936, 939, 1102, 1173
PleI GAGTC 2 cut(s) 62, 213
PmaCI CACGTG 1 cut(s) 484
PmlI CACGTG 1 cut(s) 484
PpsI GAGTC 2 cut(s) 62, 213
Ppu21I YACGTR 2 cut(s) 484, 970
PpuMI RGGWCCY 3 cut(s) 208, 946, 1024
Psp5II RGGWCCY 3 cut(s) 208, 946, 1024
Psp6I CCWGG 4 cut(s) 87, 204, 525, 953
PspCI CACGTG 1 cut(s) 484
PspFI CCCAGC 1 cut(s) 291
PspGI CCWGG 4 cut(s) 87, 204, 525, 953
PspN4I GGNNCC 9 cut(s) 70, 79, 584, 724, 791, 948, 1025, 1050, 1155
PspOMI GGGCCC 1 cut(s) 789
PspPPI RGGWCCY 3 cut(s) 208, 946, 1024
PstNI CAGNNNCTG 1 cut(s) 211
PsuI RGATCY 1 cut(s) 561
PteI GCGCGC 1 cut(s) 402
RsaI GTAC 2 cut(s) 734, 968
RsaNI GTAC 2 cut(s) 733, 967
SacII CCGCGG 1 cut(s) 757
SaqAI TTAA 3 cut(s) 446, 534, 837
SatI GCNGC 9 cut(s) 316, 568, 670, 673, 757, 935, 938, 1101, 1172
Sau3AI GATC 9 cut(s) 48, 372, 393, 429, 465, 561, 597, 924, 987
SchI GAGTC 2 cut(s) 63, 213
SduI GDGCHC 5 cut(s) 193, 414, 793, 1051, 1156
Sfr303I CCGCGG 1 cut(s) 757
SgrBI CCGCGG 1 cut(s) 757
SinI GGWCC 6 cut(s) 78, 91, 202, 208, 946, 1024
SmaI CCCGGG 1 cut(s) 653
SmlI CTYRAG 1 cut(s) 41
SmoI CTYRAG 1 cut(s) 41
SspMI CTAG 2 cut(s) 260, 794
StyI CCWWGG 2 cut(s) 72, 793
TaaI ACNGT 4 cut(s) 82, 370, 474, 541
TaiI ACGT 8 cut(s) 330, 462, 486, 738, 863, 873, 972, 1086
TaqI TCGA 4 cut(s) 33, 174, 501, 927
TauI GCSGC 7 cut(s) 318, 570, 672, 675, 759, 1103, 1174
TfiI GAWTC 2 cut(s) 10, 799
Tru1I TTAA 3 cut(s) 446, 534, 837
Tru9I TTAA 3 cut(s) 446, 534, 837
TseFI GTSAC 4 cut(s) 479, 484, 764, 1041
TseI GCWGC 2 cut(s) 934, 937
Tsp45I GTSAC 4 cut(s) 479, 484, 764, 1041
TspGWI ACGGA 8 cut(s) 365, 509, 919, 932, 1041, 1049, 1092, 1103
TspMI CCCGGG 1 cut(s) 651
Van91I CCANNNNNTGG 1 cut(s) 424
VpaK11BI GGWCC 6 cut(s) 78, 91, 202, 208, 946, 1024
XagI CCTNNNNNAGG 1 cut(s) 62
XcmI CCANNNNNNNNNTGG 1 cut(s) 958
XmaI CCCGGG 1 cut(s) 651
XmaJI CCTAGG 1 cut(s) 793
XspI CTAG 2 cut(s) 260, 794
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.