Transferase family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G62160 |
| fragaria_vesca | FvH4_1g26300 |
| rosa_chinensis | RchiOBHm_Chr3g0485971 |
| rosa_laevigata | RLG00000023118 |
| rosa_multiflora | Rmu_co8349471.1_g000001 Rmu_sc0000899.1_g000003 |
| rosa_roxburghii | Rroxscaffold_6G00396160 |
| rosa_rugosa | Rorug03G0223100 |
| rosa_samantha | Rh3AG272600 Rh3BG307200 Rh3CG305800 Rh3DG302100 |
| rosa_wichuraiana | Rw3G024170 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 179 |
| AarI | CACCTGC | 1 cut(s) | 421 |
| AbsI | CCTCGAGG | 1 cut(s) | 393 |
| Acc36I | ACCTGC | 1 cut(s) | 421 |
| AciI | CCGC | 1 cut(s) | 7 |
| AclWI | GGATC | 2 cut(s) | 19, 511 |
| AcsI | RAATTY | 2 cut(s) | 440, 473 |
| AcuI | CTGAAG | 1 cut(s) | 423 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 224 |
| AgsI | TTSAA | 3 cut(s) | 269, 275, 446 |
| AluBI | AGCT | 3 cut(s) | 102, 265, 401 |
| AluI | AGCT | 3 cut(s) | 102, 265, 401 |
| AlwI | GGATC | 2 cut(s) | 19, 511 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 489 |
| Ama87I | CYCGRG | 1 cut(s) | 393 |
| ApoI | RAATTY | 2 cut(s) | 440, 473 |
| AsuHPI | GGTGA | 2 cut(s) | 152, 445 |
| AvaI | CYCGRG | 1 cut(s) | 393 |
| BccI | CCATC | 1 cut(s) | 529 |
| BceAI | ACGGC | 1 cut(s) | 511 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 293, 327 |
| BfaI | CTAG | 1 cut(s) | 44 |
| BfuAI | ACCTGC | 1 cut(s) | 421 |
| BmeT110I | CYCGRG | 1 cut(s) | 393 |
| BmiI | GGNNCC | 1 cut(s) | 207 |
| BmsI | GCATC | 3 cut(s) | 319, 477, 495 |
| Bpu10I | CCTNAGC | 1 cut(s) | 499 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 224 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 224 |
| BseRI | GAGGAG | 1 cut(s) | 411 |
| BsgI | GTGCAG | 1 cut(s) | 492 |
| Bsh1285I | CGRYCG | 1 cut(s) | 72 |
| BsiEI | CGRYCG | 1 cut(s) | 72 |
| BsiHKCI | CYCGRG | 1 cut(s) | 393 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 224 |
| BsoBI | CYCGRG | 1 cut(s) | 393 |
| Bsp143I | GATC | 5 cut(s) | 24, 29, 69, 382, 503 |
| BspACI | CCGC | 1 cut(s) | 7 |
| BspLI | GGNNCC | 1 cut(s) | 207 |
| BspMI | ACCTGC | 1 cut(s) | 421 |
| BspPI | GGATC | 2 cut(s) | 19, 511 |
| BssMI | GATC | 5 cut(s) | 24, 29, 69, 382, 503 |
| Bst4CI | ACNGT | 2 cut(s) | 355, 513 |
| BstC8I | GCNNGC | 2 cut(s) | 59, 104 |
| BstDEI | CTNAG | 2 cut(s) | 113, 499 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 222 |
| BstKTI | GATC | 5 cut(s) | 27, 32, 72, 385, 506 |
| BstMBI | GATC | 5 cut(s) | 24, 29, 69, 382, 503 |
| BstMCI | CGRYCG | 1 cut(s) | 72 |
| BstNSI | RCATGY | 1 cut(s) | 140 |
| BstX2I | RGATCY | 1 cut(s) | 503 |
| BstYI | RGATCY | 1 cut(s) | 503 |
| BtsI | GCAGTG | 1 cut(s) | 131 |
| BtsIMutI | CAGTG | 1 cut(s) | 131 |
| BveI | ACCTGC | 1 cut(s) | 421 |
| Cac8I | GCNNGC | 2 cut(s) | 59, 104 |
| CaiI | CAGNNNCTG | 1 cut(s) | 489 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 275, 310 |
| CviAII | CATG | 4 cut(s) | 10, 54, 137, 149 |
| CviJI | RGCY | 9 cut(s) | 14, 36, 42, 102, 170, 265, 401, 480, 498 |
| CviKI_1 | RGCY | 9 cut(s) | 14, 36, 42, 102, 170, 265, 401, 480, 498 |
| DdeI | CTNAG | 2 cut(s) | 113, 499 |
| DpnI | GATC | 5 cut(s) | 26, 31, 71, 384, 505 |
| DpnII | GATC | 5 cut(s) | 24, 29, 69, 382, 503 |
| Eco57I | CTGAAG | 1 cut(s) | 423 |
| Eco88I | CYCGRG | 1 cut(s) | 393 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 222 |
| FaeI | CATG | 4 cut(s) | 13, 57, 140, 152 |
| FatI | CATG | 4 cut(s) | 9, 53, 136, 148 |
| FauNDI | CATATG | 1 cut(s) | 310 |
| FspBI | CTAG | 1 cut(s) | 44 |
| Hin1II | CATG | 4 cut(s) | 13, 57, 140, 152 |
| HinfI | GANTC | 1 cut(s) | 456 |
| HphI | GGTGA | 2 cut(s) | 152, 445 |
| Hpy166II | GTNNAC | 2 cut(s) | 284, 323 |
| Hpy188I | TCNGA | 2 cut(s) | 29, 91 |
| Hpy8I | GTNNAC | 2 cut(s) | 284, 323 |
| Hpy99I | CGWCG | 1 cut(s) | 497 |
| HpyAV | CCTTC | 2 cut(s) | 179, 398 |
| HpyCH4III | ACNGT | 2 cut(s) | 355, 513 |
| HpyCH4V | TGCA | 5 cut(s) | 4, 136, 224, 430, 509 |
| HpyF3I | CTNAG | 2 cut(s) | 113, 499 |
| Hsp92II | CATG | 4 cut(s) | 13, 57, 140, 152 |
| Kzo9I | GATC | 5 cut(s) | 24, 29, 69, 382, 503 |
| LmnI | GCTCC | 1 cut(s) | 398 |
| LpnPI | CCDG | 2 cut(s) | 210, 416 |
| LweI | GCATC | 3 cut(s) | 319, 477, 495 |
| MaeI | CTAG | 1 cut(s) | 44 |
| MaeIII | GTNAC | 1 cut(s) | 433 |
| MalI | GATC | 5 cut(s) | 26, 31, 71, 384, 505 |
| MboI | GATC | 5 cut(s) | 24, 29, 69, 382, 503 |
| MboII | GAAGA | 2 cut(s) | 377, 380 |
| MflI | RGATCY | 1 cut(s) | 503 |
| MluCI | AATT | 4 cut(s) | 316, 337, 440, 473 |
| MnlI | CCTC | 6 cut(s) | 228, 251, 298, 370, 389, 402 |
| MseI | TTAA | 1 cut(s) | 249 |
| NdeI | CATATG | 1 cut(s) | 310 |
| NdeII | GATC | 5 cut(s) | 24, 29, 69, 382, 503 |
| NlaIII | CATG | 4 cut(s) | 13, 57, 140, 152 |
| NlaIV | GGNNCC | 1 cut(s) | 207 |
| NmuCI | GTSAC | 1 cut(s) | 433 |
| NspI | RCATGY | 1 cut(s) | 140 |
| PaeR7I | CTCGAG | 1 cut(s) | 393 |
| PaqCI | CACCTGC | 1 cut(s) | 421 |
| PfeI | GAWTC | 1 cut(s) | 456 |
| Ple19I | CGATCG | 1 cut(s) | 72 |
| PsiI | TTATAA | 1 cut(s) | 179 |
| PspN4I | GGNNCC | 1 cut(s) | 207 |
| PspXI | VCTCGAGB | 1 cut(s) | 393 |
| PstNI | CAGNNNCTG | 1 cut(s) | 489 |
| PsuI | RGATCY | 1 cut(s) | 503 |
| PvuI | CGATCG | 1 cut(s) | 72 |
| SaqAI | TTAA | 1 cut(s) | 249 |
| Sau3AI | GATC | 5 cut(s) | 24, 29, 69, 382, 503 |
| SetI | ASST | 8 cut(s) | 104, 190, 262, 267, 292, 403, 417, 435 |
| SfaNI | GCATC | 3 cut(s) | 319, 477, 495 |
| Sfr274I | CTCGAG | 1 cut(s) | 393 |
| SlaI | CTCGAG | 1 cut(s) | 393 |
| SmlI | CTYRAG | 1 cut(s) | 393 |
| SmoI | CTYRAG | 1 cut(s) | 393 |
| Sse9I | AATT | 4 cut(s) | 316, 337, 440, 473 |
| SsiI | CCGC | 1 cut(s) | 7 |
| SspMI | CTAG | 1 cut(s) | 44 |
| TaaI | ACNGT | 2 cut(s) | 355, 513 |
| TaqI | TCGA | 6 cut(s) | 96, 127, 194, 303, 368, 394 |
| TasI | AATT | 4 cut(s) | 316, 337, 440, 473 |
| TfiI | GAWTC | 1 cut(s) | 456 |
| Tru1I | TTAA | 1 cut(s) | 249 |
| Tru9I | TTAA | 1 cut(s) | 249 |
| TscAI | CASTG | 1 cut(s) | 138 |
| TseFI | GTSAC | 1 cut(s) | 433 |
| Tsp45I | GTSAC | 1 cut(s) | 433 |
| TspRI | CASTG | 1 cut(s) | 138 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 222 |
| XapI | RAATTY | 2 cut(s) | 440, 473 |
| XceI | RCATGY | 1 cut(s) | 140 |
| XhoI | CTCGAG | 1 cut(s) | 393 |
| XspI | CTAG | 1 cut(s) | 44 |