Alpha/beta hydrolase family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g14140 |
| pyrus_communis | pycom05g29390 |
| rosa_chinensis | RchiOBHm_Chr5g0007851 |
| rosa_multiflora | Rmu_co8357371.1_g000001 Rmu_sc0005098.1_g000010 |
| rosa_samantha | Rh5AG059500 Rh5CG066200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 126 |
| AcoI | YGGCCR | 1 cut(s) | 144 |
| AfaI | GTAC | 1 cut(s) | 116 |
| AgsI | TTSAA | 1 cut(s) | 232 |
| AluBI | AGCT | 3 cut(s) | 46, 202, 209 |
| AluI | AGCT | 3 cut(s) | 46, 202, 209 |
| AoxI | GGCC | 1 cut(s) | 144 |
| ApeKI | GCWGC | 1 cut(s) | 202 |
| AspS9I | GGNCC | 2 cut(s) | 71, 235 |
| AvaII | GGWCC | 2 cut(s) | 71, 235 |
| BalI | TGGCCA | 1 cut(s) | 146 |
| BanI | GGYRCC | 1 cut(s) | 126 |
| BbvI | GCAGC | 1 cut(s) | 189 |
| BisI | GCNGC | 1 cut(s) | 203 |
| BlpI | GCTNAGC | 1 cut(s) | 210 |
| BlsI | GCNGC | 1 cut(s) | 204 |
| Bme18I | GGWCC | 2 cut(s) | 71, 235 |
| BmgT120I | GGNCC | 2 cut(s) | 71, 235 |
| BmiI | GGNNCC | 1 cut(s) | 128 |
| BmsI | GCATC | 1 cut(s) | 256 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 210 |
| BseGI | GGATG | 1 cut(s) | 271 |
| BseMII | CTCAG | 2 cut(s) | 189, 201 |
| BseXI | GCAGC | 1 cut(s) | 189 |
| BshFI | GGCC | 1 cut(s) | 146 |
| BshNI | GGYRCC | 1 cut(s) | 126 |
| BsnI | GGCC | 1 cut(s) | 146 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 210 |
| BspANI | GGCC | 1 cut(s) | 146 |
| BspCNI | CTCAG | 2 cut(s) | 190, 202 |
| BspLI | GGNNCC | 1 cut(s) | 128 |
| BspT107I | GGYRCC | 1 cut(s) | 126 |
| BstC8I | GCNNGC | 1 cut(s) | 207 |
| BstDEI | CTNAG | 2 cut(s) | 198, 210 |
| BstF5I | GGATG | 1 cut(s) | 271 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 211 |
| BstV1I | GCAGC | 1 cut(s) | 189 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 111 |
| BsuRI | GGCC | 1 cut(s) | 146 |
| BtsCI | GGATG | 1 cut(s) | 271 |
| Cac8I | GCNNGC | 1 cut(s) | 207 |
| Cfr13I | GGNCC | 2 cut(s) | 71, 235 |
| Csp6I | GTAC | 1 cut(s) | 115 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 63, 98 |
| CviAII | CATG | 3 cut(s) | 50, 95, 120 |
| CviJI | RGCY | 7 cut(s) | 46, 56, 146, 156, 202, 209, 214 |
| CviKI_1 | RGCY | 7 cut(s) | 46, 56, 146, 156, 202, 209, 214 |
| CviQI | GTAC | 1 cut(s) | 115 |
| DdeI | CTNAG | 2 cut(s) | 198, 210 |
| EaeI | YGGCCR | 1 cut(s) | 144 |
| Eco47I | GGWCC | 2 cut(s) | 71, 235 |
| EcoO109I | RGGNCCY | 1 cut(s) | 235 |
| FaeI | CATG | 3 cut(s) | 53, 98, 123 |
| FaiI | YATR | 8 cut(s) | 18, 24, 51, 96, 112, 121, 174, 189 |
| FatI | CATG | 3 cut(s) | 49, 94, 119 |
| Fnu4HI | GCNGC | 1 cut(s) | 203 |
| FokI | GGATG | 1 cut(s) | 278 |
| Fsp4HI | GCNGC | 1 cut(s) | 203 |
| GluI | GCNGC | 1 cut(s) | 203 |
| HaeIII | GGCC | 1 cut(s) | 146 |
| Hin1II | CATG | 3 cut(s) | 53, 98, 123 |
| HincII | GTYRAC | 1 cut(s) | 244 |
| HindII | GTYRAC | 1 cut(s) | 244 |
| HindIII | AAGCTT | 1 cut(s) | 44 |
| Hpy166II | GTNNAC | 1 cut(s) | 244 |
| Hpy188I | TCNGA | 1 cut(s) | 199 |
| Hpy188III | TCNNGA | 1 cut(s) | 104 |
| Hpy8I | GTNNAC | 1 cut(s) | 244 |
| HpyAV | CCTTC | 1 cut(s) | 29 |
| HpyCH4V | TGCA | 2 cut(s) | 94, 180 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 211 |
| HpyF3I | CTNAG | 2 cut(s) | 198, 210 |
| Hsp92II | CATG | 3 cut(s) | 53, 98, 123 |
| LpnPI | CCDG | 4 cut(s) | 117, 166, 219, 228 |
| Lsp1109I | GCAGC | 1 cut(s) | 189 |
| LweI | GCATC | 1 cut(s) | 256 |
| MlsI | TGGCCA | 1 cut(s) | 146 |
| MluCI | AATT | 3 cut(s) | 60, 165, 276 |
| MluNI | TGGCCA | 1 cut(s) | 146 |
| MnlI | CCTC | 4 cut(s) | 22, 117, 241, 248 |
| Mox20I | TGGCCA | 1 cut(s) | 146 |
| MscI | TGGCCA | 1 cut(s) | 146 |
| MslI | CAYNNNNRTG | 1 cut(s) | 21 |
| Msp20I | TGGCCA | 1 cut(s) | 146 |
| MspA1I | CMGCKG | 1 cut(s) | 209 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 211 |
| NlaIII | CATG | 3 cut(s) | 53, 98, 123 |
| NlaIV | GGNNCC | 1 cut(s) | 128 |
| PkrI | GCNGC | 1 cut(s) | 204 |
| PpuMI | RGGWCCY | 1 cut(s) | 235 |
| Psp5II | RGGWCCY | 1 cut(s) | 235 |
| PspN4I | GGNNCC | 1 cut(s) | 128 |
| PspPI | GGNCC | 2 cut(s) | 71, 235 |
| PspPPI | RGGWCCY | 1 cut(s) | 235 |
| PvuII | CAGCTG | 1 cut(s) | 209 |
| RsaI | GTAC | 1 cut(s) | 116 |
| RsaNI | GTAC | 1 cut(s) | 115 |
| RseI | CAYNNNNRTG | 1 cut(s) | 21 |
| SatI | GCNGC | 1 cut(s) | 203 |
| Sau96I | GGNCC | 2 cut(s) | 71, 235 |
| SetI | ASST | 7 cut(s) | 33, 48, 81, 204, 211, 240, 252 |
| SfaNI | GCATC | 1 cut(s) | 256 |
| SinI | GGWCC | 2 cut(s) | 71, 235 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 21 |
| Sse9I | AATT | 3 cut(s) | 60, 165, 276 |
| TasI | AATT | 3 cut(s) | 60, 165, 276 |
| TseI | GCWGC | 1 cut(s) | 202 |
| TspDTI | ATGAA | 1 cut(s) | 38 |
| VpaK11BI | GGWCC | 2 cut(s) | 71, 235 |