Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g09870 |
| malus_domestica | MD04G1174700.v1.1 |
| prunus_persica | Prupe.6G293600_v2.0.a1 |
| pyrus_communis | pycom04g15410 |
| rosa_chinensis | RchiOBHm_Chr3g0460471 |
| rosa_laevigata | RLG00000025002 RLG00000025008 |
| rosa_multiflora | Rmu_co8379257.1_g000001 Rmu_sc0004267.1_g000007 |
| rosa_roxburghii | Rroxscaffold_6G00419450 |
| rosa_rugosa | Rorug03G0042900 |
| rosa_samantha | Rh3AG101000 Rh3BG105000 Rh3CG106800 Rh3DG106300 |
| rosa_wichuraiana | Rw3G008590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 847 |
| AfaI | GTAC | 4 cut(s) | 302, 533, 838, 1012 |
| AgsI | TTSAA | 8 cut(s) | 167, 296, 514, 574, 643, 800, 904, 962 |
| AluBI | AGCT | 5 cut(s) | 42, 245, 413, 476, 833 |
| AluI | AGCT | 5 cut(s) | 42, 245, 413, 476, 833 |
| AlwI | GGATC | 1 cut(s) | 847 |
| AoxI | GGCC | 1 cut(s) | 138 |
| AseI | ATTAAT | 1 cut(s) | 491 |
| AspS9I | GGNCC | 1 cut(s) | 279 |
| AsuHPI | GGTGA | 3 cut(s) | 274, 921, 934 |
| AsuII | TTCGAA | 1 cut(s) | 702 |
| AvaII | GGWCC | 1 cut(s) | 279 |
| BccI | CCATC | 6 cut(s) | 259, 416, 451, 521, 679, 907 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 445, 479 |
| BclI | TGATCA | 2 cut(s) | 894, 939 |
| BfaI | CTAG | 1 cut(s) | 834 |
| BfmI | CTRYAG | 1 cut(s) | 535 |
| Bme18I | GGWCC | 1 cut(s) | 279 |
| BmgT120I | GGNCC | 1 cut(s) | 279 |
| BmiI | GGNNCC | 1 cut(s) | 280 |
| BmsI | GCATC | 4 cut(s) | 337, 606, 772, 982 |
| Bpu14I | TTCGAA | 1 cut(s) | 702 |
| BsaJI | CCNNGG | 1 cut(s) | 932 |
| Bse3DI | GCAATG | 1 cut(s) | 558 |
| BseDI | CCNNGG | 1 cut(s) | 932 |
| BseGI | GGATG | 6 cut(s) | 139, 352, 427, 597, 715, 942 |
| BseMI | GCAATG | 1 cut(s) | 558 |
| BseMII | CTCAG | 1 cut(s) | 966 |
| BshFI | GGCC | 1 cut(s) | 140 |
| BslFI | GGGAC | 1 cut(s) | 573 |
| BsmFI | GGGAC | 1 cut(s) | 573 |
| BsmI | GAATGC | 1 cut(s) | 730 |
| BsnI | GGCC | 1 cut(s) | 140 |
| Bsp119I | TTCGAA | 1 cut(s) | 702 |
| Bsp1407I | TGTACA | 1 cut(s) | 300 |
| Bsp143I | GATC | 5 cut(s) | 127, 752, 852, 894, 939 |
| Bsp19I | CCATGG | 1 cut(s) | 932 |
| BspANI | GGCC | 1 cut(s) | 140 |
| BspCNI | CTCAG | 1 cut(s) | 967 |
| BspLI | GGNNCC | 1 cut(s) | 280 |
| BspMAI | CTGCAG | 1 cut(s) | 539 |
| BspPI | GGATC | 1 cut(s) | 847 |
| BspT104I | TTCGAA | 1 cut(s) | 702 |
| BsrDI | GCAATG | 1 cut(s) | 558 |
| BsrGI | TGTACA | 1 cut(s) | 300 |
| BssECI | CCNNGG | 1 cut(s) | 932 |
| BssMI | GATC | 5 cut(s) | 127, 752, 852, 894, 939 |
| BssT1I | CCWWGG | 1 cut(s) | 932 |
| Bst4CI | ACNGT | 4 cut(s) | 68, 116, 292, 795 |
| Bst6I | CTCTTC | 1 cut(s) | 331 |
| BstAUI | TGTACA | 1 cut(s) | 300 |
| BstBI | TTCGAA | 1 cut(s) | 702 |
| BstDEI | CTNAG | 2 cut(s) | 668, 975 |
| BstDSI | CCRYGG | 1 cut(s) | 932 |
| BstF5I | GGATG | 6 cut(s) | 139, 352, 427, 597, 715, 942 |
| BstKTI | GATC | 5 cut(s) | 130, 755, 855, 897, 942 |
| BstMBI | GATC | 5 cut(s) | 127, 752, 852, 894, 939 |
| BstSFI | CTRYAG | 1 cut(s) | 535 |
| BsuRI | GGCC | 1 cut(s) | 140 |
| BtgI | CCRYGG | 1 cut(s) | 932 |
| BtgZI | GCGATG | 1 cut(s) | 470 |
| BtsCI | GGATG | 6 cut(s) | 139, 352, 427, 597, 715, 942 |
| BtsI | GCAGTG | 1 cut(s) | 924 |
| BtsIMutI | CAGTG | 2 cut(s) | 288, 924 |
| Cfr13I | GGNCC | 1 cut(s) | 279 |
| CseI | GACGC | 1 cut(s) | 896 |
| Csp6I | GTAC | 4 cut(s) | 301, 532, 837, 1011 |
| CviAII | CATG | 3 cut(s) | 632, 868, 933 |
| CviJI | RGCY | 9 cut(s) | 5, 42, 140, 245, 286, 413, 476, 833, 847 |
| CviKI_1 | RGCY | 9 cut(s) | 5, 42, 140, 245, 286, 413, 476, 833, 847 |
| CviQI | GTAC | 4 cut(s) | 301, 532, 837, 1011 |
| DdeI | CTNAG | 2 cut(s) | 668, 975 |
| DpnI | GATC | 5 cut(s) | 129, 754, 854, 896, 941 |
| DpnII | GATC | 5 cut(s) | 127, 752, 852, 894, 939 |
| Eam1104I | CTCTTC | 1 cut(s) | 331 |
| EarI | CTCTTC | 1 cut(s) | 331 |
| Eco130I | CCWWGG | 1 cut(s) | 932 |
| Eco47I | GGWCC | 1 cut(s) | 279 |
| EcoT14I | CCWWGG | 1 cut(s) | 932 |
| EcoT22I | ATGCAT | 2 cut(s) | 352, 997 |
| ErhI | CCWWGG | 1 cut(s) | 932 |
| FaeI | CATG | 3 cut(s) | 635, 871, 936 |
| FaqI | GGGAC | 1 cut(s) | 573 |
| FatI | CATG | 3 cut(s) | 631, 867, 932 |
| FauNDI | CATATG | 3 cut(s) | 159, 352, 841 |
| FbaI | TGATCA | 2 cut(s) | 894, 939 |
| FokI | GGATG | 6 cut(s) | 146, 359, 434, 584, 722, 949 |
| FspBI | CTAG | 1 cut(s) | 834 |
| HaeIII | GGCC | 1 cut(s) | 140 |
| HgaI | GACGC | 1 cut(s) | 896 |
| Hin1II | CATG | 3 cut(s) | 635, 871, 936 |
| HinfI | GANTC | 3 cut(s) | 80, 212, 958 |
| HphI | GGTGA | 3 cut(s) | 274, 921, 934 |
| Hpy166II | GTNNAC | 1 cut(s) | 791 |
| Hpy188I | TCNGA | 1 cut(s) | 976 |
| Hpy188III | TCNNGA | 2 cut(s) | 77, 131 |
| Hpy8I | GTNNAC | 1 cut(s) | 791 |
| HpyAV | CCTTC | 3 cut(s) | 370, 577, 754 |
| HpyCH4III | ACNGT | 4 cut(s) | 68, 116, 292, 795 |
| HpyF3I | CTNAG | 2 cut(s) | 668, 975 |
| Hsp92II | CATG | 3 cut(s) | 635, 871, 936 |
| Ksp22I | TGATCA | 2 cut(s) | 894, 939 |
| Kzo9I | GATC | 5 cut(s) | 127, 752, 852, 894, 939 |
| LpnPI | CCDG | 9 cut(s) | 90, 116, 121, 510, 523, 615, 733, 785, 799 |
| LweI | GCATC | 4 cut(s) | 337, 606, 772, 982 |
| MaeI | CTAG | 1 cut(s) | 834 |
| MaeIII | GTNAC | 2 cut(s) | 110, 627 |
| MalI | GATC | 5 cut(s) | 129, 754, 854, 896, 941 |
| MboI | GATC | 5 cut(s) | 127, 752, 852, 894, 939 |
| MboII | GAAGA | 5 cut(s) | 75, 348, 379, 791, 889 |
| MfeI | CAATTG | 1 cut(s) | 304 |
| MluCI | AATT | 4 cut(s) | 304, 693, 803, 898 |
| MmeI | TCCRAC | 1 cut(s) | 756 |
| Mph1103I | ATGCAT | 2 cut(s) | 352, 997 |
| MseI | TTAA | 6 cut(s) | 177, 314, 468, 491, 564, 948 |
| MspA1I | CMGCKG | 1 cut(s) | 413 |
| MunI | CAATTG | 1 cut(s) | 304 |
| Mva1269I | GAATGC | 1 cut(s) | 730 |
| NcoI | CCATGG | 1 cut(s) | 932 |
| NdeI | CATATG | 3 cut(s) | 159, 352, 841 |
| NdeII | GATC | 5 cut(s) | 127, 752, 852, 894, 939 |
| NlaIII | CATG | 3 cut(s) | 635, 871, 936 |
| NlaIV | GGNNCC | 1 cut(s) | 280 |
| NsiI | ATGCAT | 2 cut(s) | 352, 997 |
| NspV | TTCGAA | 1 cut(s) | 702 |
| PctI | GAATGC | 1 cut(s) | 730 |
| PfeI | GAWTC | 3 cut(s) | 80, 212, 958 |
| PshBI | ATTAAT | 1 cut(s) | 491 |
| PspN4I | GGNNCC | 1 cut(s) | 280 |
| PspPI | GGNCC | 1 cut(s) | 279 |
| PstI | CTGCAG | 1 cut(s) | 539 |
| PvuII | CAGCTG | 1 cut(s) | 413 |
| RsaI | GTAC | 4 cut(s) | 302, 533, 838, 1012 |
| RsaNI | GTAC | 4 cut(s) | 301, 532, 837, 1011 |
| SaqAI | TTAA | 6 cut(s) | 177, 314, 468, 491, 564, 948 |
| Sau3AI | GATC | 5 cut(s) | 127, 752, 852, 894, 939 |
| Sau96I | GGNCC | 1 cut(s) | 279 |
| SfaNI | GCATC | 4 cut(s) | 337, 606, 772, 982 |
| SfcI | CTRYAG | 1 cut(s) | 535 |
| SfuI | TTCGAA | 1 cut(s) | 702 |
| SinI | GGWCC | 1 cut(s) | 279 |
| Sse9I | AATT | 4 cut(s) | 304, 693, 803, 898 |
| SspMI | CTAG | 1 cut(s) | 834 |
| StyI | CCWWGG | 1 cut(s) | 932 |
| TaaI | ACNGT | 4 cut(s) | 68, 116, 292, 795 |
| TaqI | TCGA | 2 cut(s) | 702, 758 |
| TasI | AATT | 4 cut(s) | 304, 693, 803, 898 |
| TatI | WGTACW | 2 cut(s) | 300, 836 |
| TfiI | GAWTC | 3 cut(s) | 80, 212, 958 |
| Tru1I | TTAA | 6 cut(s) | 177, 314, 468, 491, 564, 948 |
| Tru9I | TTAA | 6 cut(s) | 177, 314, 468, 491, 564, 948 |
| TscAI | CASTG | 2 cut(s) | 295, 924 |
| TspDTI | ATGAA | 6 cut(s) | 66, 204, 369, 380, 486, 596 |
| TspRI | CASTG | 2 cut(s) | 295, 924 |
| VpaK11BI | GGWCC | 1 cut(s) | 279 |
| VspI | ATTAAT | 1 cut(s) | 491 |
| XspI | CTAG | 1 cut(s) | 834 |
| Zsp2I | ATGCAT | 2 cut(s) | 352, 997 |