Heterogeneous nuclear ribonucleoprotein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g40460 |
| malus_domestica | MD17G1118700.v1.1 MD17G1277100.v1.1 |
| prunus_persica | Prupe.3G195500_v2.0.a1 |
| pyrus_communis | pycom17g10900 |
| rosa_chinensis | RchiOBHm_Chr2g0155691 |
| rosa_multiflora | Rmu_co8436359.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00093550 |
| rosa_rugosa | Rorug02G0449400 |
| rosa_samantha | Rh2AG515300 Rh2CG500200 Rh2DG535200 |
| rosa_wichuraiana | Rw2G042350 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 91 |
| AccBSI | CCGCTC | 1 cut(s) | 59 |
| AccII | CGCG | 1 cut(s) | 484 |
| AciI | CCGC | 3 cut(s) | 57, 378, 482 |
| AcsI | RAATTY | 1 cut(s) | 203 |
| AcuI | CTGAAG | 1 cut(s) | 58 |
| AfaI | GTAC | 1 cut(s) | 494 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 173, 293 |
| AjnI | CCWGG | 3 cut(s) | 148, 292, 460 |
| AluBI | AGCT | 1 cut(s) | 404 |
| AluI | AGCT | 1 cut(s) | 404 |
| Alw26I | GTCTC | 2 cut(s) | 75, 278 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 461 |
| Ama87I | CYCGRG | 1 cut(s) | 436 |
| AoxI | GGCC | 5 cut(s) | 45, 145, 160, 175, 457 |
| ApoI | RAATTY | 1 cut(s) | 203 |
| AspS9I | GGNCC | 5 cut(s) | 146, 176, 284, 458, 479 |
| AsuHPI | GGTGA | 1 cut(s) | 452 |
| AvaI | CYCGRG | 1 cut(s) | 436 |
| AvaII | GGWCC | 2 cut(s) | 284, 479 |
| BaeGI | GKGCMC | 1 cut(s) | 94 |
| BanI | GGYRCC | 1 cut(s) | 91 |
| BccI | CCATC | 1 cut(s) | 437 |
| BciT130I | CCWGG | 3 cut(s) | 150, 294, 462 |
| BciVI | GTATCC | 1 cut(s) | 333 |
| BcoDI | GTCTC | 2 cut(s) | 75, 278 |
| BfaI | CTAG | 6 cut(s) | 87, 108, 327, 405, 468, 501 |
| BfmI | CTRYAG | 1 cut(s) | 187 |
| BfuI | GTATCC | 1 cut(s) | 333 |
| Bme1390I | CCNGG | 3 cut(s) | 150, 294, 462 |
| Bme18I | GGWCC | 2 cut(s) | 284, 479 |
| BmeT110I | CYCGRG | 1 cut(s) | 436 |
| BmgT120I | GGNCC | 5 cut(s) | 146, 176, 284, 458, 479 |
| BmiI | GGNNCC | 1 cut(s) | 93 |
| BmrFI | CCNGG | 3 cut(s) | 150, 294, 462 |
| BmsI | GCATC | 1 cut(s) | 232 |
| BsaBI | GATNNNNATC | 1 cut(s) | 337 |
| BsaI | GGTCTC | 1 cut(s) | 278 |
| BsaJI | CCNNGG | 2 cut(s) | 148, 460 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 173, 293 |
| Bse8I | GATNNNNATC | 1 cut(s) | 337 |
| BseBI | CCWGG | 3 cut(s) | 150, 294, 462 |
| BseDI | CCNNGG | 2 cut(s) | 148, 460 |
| BseGI | GGATG | 2 cut(s) | 10, 338 |
| BseJI | GATNNNNATC | 1 cut(s) | 337 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 173, 293 |
| BseMII | CTCAG | 1 cut(s) | 289 |
| BseSI | GKGCMC | 1 cut(s) | 94 |
| BseYI | CCCAGC | 1 cut(s) | 425 |
| Bsh1236I | CGCG | 1 cut(s) | 484 |
| BshFI | GGCC | 5 cut(s) | 47, 147, 162, 177, 459 |
| BshNI | GGYRCC | 1 cut(s) | 91 |
| BsiHKCI | CYCGRG | 1 cut(s) | 436 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 173, 293 |
| BsmAI | GTCTC | 2 cut(s) | 75, 278 |
| BsnI | GGCC | 5 cut(s) | 47, 147, 162, 177, 459 |
| Bso31I | GGTCTC | 1 cut(s) | 278 |
| BsoBI | CYCGRG | 1 cut(s) | 436 |
| Bsp1286I | GDGCHC | 1 cut(s) | 94 |
| Bsp143I | GATC | 1 cut(s) | 21 |
| BspACI | CCGC | 3 cut(s) | 57, 378, 482 |
| BspANI | GGCC | 5 cut(s) | 47, 147, 162, 177, 459 |
| BspCNI | CTCAG | 1 cut(s) | 288 |
| BspFNI | CGCG | 1 cut(s) | 484 |
| BspLI | GGNNCC | 1 cut(s) | 93 |
| BspT107I | GGYRCC | 1 cut(s) | 91 |
| BspTNI | GGTCTC | 1 cut(s) | 278 |
| BsrBI | CCGCTC | 1 cut(s) | 59 |
| BssECI | CCNNGG | 2 cut(s) | 148, 460 |
| BssMI | GATC | 1 cut(s) | 21 |
| Bst2UI | CCWGG | 3 cut(s) | 150, 294, 462 |
| Bst4CI | ACNGT | 1 cut(s) | 497 |
| BstDEI | CTNAG | 1 cut(s) | 275 |
| BstF5I | GGATG | 2 cut(s) | 10, 338 |
| BstFNI | CGCG | 1 cut(s) | 484 |
| BstKTI | GATC | 1 cut(s) | 24 |
| BstMAI | GTCTC | 2 cut(s) | 75, 278 |
| BstMBI | GATC | 1 cut(s) | 21 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 506 |
| BstNI | CCWGG | 3 cut(s) | 150, 294, 462 |
| BstSCI | CCNGG | 3 cut(s) | 148, 292, 460 |
| BstSFI | CTRYAG | 1 cut(s) | 187 |
| BstSLI | GKGCMC | 1 cut(s) | 94 |
| BstUI | CGCG | 1 cut(s) | 484 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 542 |
| BsuI | GTATCC | 1 cut(s) | 333 |
| BsuRI | GGCC | 5 cut(s) | 47, 147, 162, 177, 459 |
| BtsCI | GGATG | 2 cut(s) | 10, 338 |
| CaiI | CAGNNNCTG | 1 cut(s) | 461 |
| Cfr13I | GGNCC | 5 cut(s) | 146, 176, 284, 458, 479 |
| Csp6I | GTAC | 1 cut(s) | 493 |
| CviAII | CATG | 3 cut(s) | 62, 104, 197 |
| CviQI | GTAC | 1 cut(s) | 493 |
| DdeI | CTNAG | 1 cut(s) | 275 |
| DpnI | GATC | 1 cut(s) | 23 |
| DpnII | GATC | 1 cut(s) | 21 |
| Eco147I | AGGCCT | 1 cut(s) | 47 |
| Eco31I | GGTCTC | 1 cut(s) | 278 |
| Eco47I | GGWCC | 2 cut(s) | 284, 479 |
| Eco57I | CTGAAG | 1 cut(s) | 58 |
| Eco88I | CYCGRG | 1 cut(s) | 436 |
| EcoO109I | RGGNCCY | 1 cut(s) | 458 |
| EcoRII | CCWGG | 3 cut(s) | 148, 292, 460 |
| FaeI | CATG | 3 cut(s) | 65, 107, 200 |
| FatI | CATG | 3 cut(s) | 61, 103, 196 |
| FauI | CCCGC | 2 cut(s) | 64, 371 |
| FauNDI | CATATG | 1 cut(s) | 391 |
| FokI | GGATG | 2 cut(s) | 17, 325 |
| FspBI | CTAG | 6 cut(s) | 87, 108, 327, 405, 468, 501 |
| GsaI | CCCAGC | 1 cut(s) | 429 |
| HaeIII | GGCC | 5 cut(s) | 47, 147, 162, 177, 459 |
| Hin1II | CATG | 3 cut(s) | 65, 107, 200 |
| HinfI | GANTC | 4 cut(s) | 83, 308, 333, 452 |
| HphI | GGTGA | 1 cut(s) | 452 |
| Hpy188I | TCNGA | 2 cut(s) | 241, 278 |
| Hpy188III | TCNNGA | 1 cut(s) | 25 |
| HpyAV | CCTTC | 8 cut(s) | 22, 37, 82, 173, 177, 192, 470, 540 |
| HpyCH4III | ACNGT | 1 cut(s) | 497 |
| HpyCH4V | TGCA | 1 cut(s) | 389 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 506 |
| HpyF3I | CTNAG | 1 cut(s) | 275 |
| Hsp92II | CATG | 3 cut(s) | 65, 107, 200 |
| Kzo9I | GATC | 1 cut(s) | 21 |
| LweI | GCATC | 1 cut(s) | 232 |
| MaeI | CTAG | 6 cut(s) | 87, 108, 327, 405, 468, 501 |
| MaeIII | GTNAC | 2 cut(s) | 192, 530 |
| MalI | GATC | 1 cut(s) | 23 |
| MbiI | CCGCTC | 1 cut(s) | 59 |
| MboI | GATC | 1 cut(s) | 21 |
| MboII | GAAGA | 2 cut(s) | 52, 303 |
| MhlI | GDGCHC | 1 cut(s) | 94 |
| MluCI | AATT | 1 cut(s) | 203 |
| MlyI | GAGTC | 1 cut(s) | 77 |
| MnlI | CCTC | 6 cut(s) | 58, 189, 262, 272, 344, 479 |
| MslI | CAYNNNNRTG | 1 cut(s) | 540 |
| MspR9I | CCNGG | 3 cut(s) | 150, 294, 462 |
| MvaI | CCWGG | 3 cut(s) | 150, 294, 462 |
| MvnI | CGCG | 1 cut(s) | 484 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 506 |
| NdeI | CATATG | 1 cut(s) | 391 |
| NdeII | GATC | 1 cut(s) | 21 |
| NlaIII | CATG | 3 cut(s) | 65, 107, 200 |
| NlaIV | GGNNCC | 1 cut(s) | 93 |
| NmuCI | GTSAC | 1 cut(s) | 192 |
| PceI | AGGCCT | 1 cut(s) | 47 |
| PfeI | GAWTC | 3 cut(s) | 308, 333, 452 |
| PleI | GAGTC | 1 cut(s) | 77 |
| PpsI | GAGTC | 1 cut(s) | 77 |
| Psp6I | CCWGG | 3 cut(s) | 148, 292, 460 |
| PspFI | CCCAGC | 1 cut(s) | 425 |
| PspGI | CCWGG | 3 cut(s) | 148, 292, 460 |
| PspN4I | GGNNCC | 1 cut(s) | 93 |
| PspPI | GGNCC | 5 cut(s) | 146, 176, 284, 458, 479 |
| PstNI | CAGNNNCTG | 1 cut(s) | 461 |
| RsaI | GTAC | 1 cut(s) | 494 |
| RsaNI | GTAC | 1 cut(s) | 493 |
| RseI | CAYNNNNRTG | 1 cut(s) | 540 |
| Sau3AI | GATC | 1 cut(s) | 21 |
| Sau96I | GGNCC | 5 cut(s) | 146, 176, 284, 458, 479 |
| SchI | GAGTC | 1 cut(s) | 77 |
| ScrFI | CCNGG | 3 cut(s) | 150, 294, 462 |
| SduI | GDGCHC | 1 cut(s) | 94 |
| SetI | ASST | 7 cut(s) | 18, 194, 218, 283, 388, 406, 551 |
| SfaNI | GCATC | 1 cut(s) | 232 |
| SfcI | CTRYAG | 1 cut(s) | 187 |
| SinI | GGWCC | 2 cut(s) | 284, 479 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 540 |
| Sse9I | AATT | 1 cut(s) | 203 |
| SseBI | AGGCCT | 1 cut(s) | 47 |
| SsiI | CCGC | 3 cut(s) | 57, 378, 482 |
| SspMI | CTAG | 6 cut(s) | 87, 108, 327, 405, 468, 501 |
| StuI | AGGCCT | 1 cut(s) | 47 |
| StyD4I | CCNGG | 3 cut(s) | 148, 292, 460 |
| TaaI | ACNGT | 1 cut(s) | 497 |
| TasI | AATT | 1 cut(s) | 203 |
| TfiI | GAWTC | 3 cut(s) | 308, 333, 452 |
| TseFI | GTSAC | 1 cut(s) | 192 |
| Tsp45I | GTSAC | 1 cut(s) | 192 |
| TspDTI | ATGAA | 2 cut(s) | 303, 489 |
| TspGWI | ACGGA | 1 cut(s) | 318 |
| VpaK11BI | GGWCC | 2 cut(s) | 284, 479 |
| XapI | RAATTY | 1 cut(s) | 203 |
| XspI | CTAG | 6 cut(s) | 87, 108, 327, 405, 468, 501 |