Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_co8508821.1

Orthogroup ID

OG0011670

Physical Location & Seq

Genomic Coordinates Forward (+)

1 .. 3044

Gene Structure 3044 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_co8508821.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2223 bp

ggttctgatgacgtaggaatgaacaaggagtctaaggagttcgccggcgagcttttccgggcacttgctcggagacgcaacattagtggtgattgcatcaacaaggcacagcttagagaattctgggagcagatttctgacgagagcttcgactctaggctccagactttctttgacatggtggataaagacgccgatggaagaatcacagaagaagaagtcagagagattattagtctcagtgcttctgcgaacaaactctccaacattcagaaacaagctcaggaatatgcagcgctcattatggaagagcttgacccagacaatgttggctacattatggttgaaaacttggaaactttgttgctgcaagctccggtgcacaaatcggtcacggtaggcgacagccgagttctgagtcagctactgagtcagaagctgaagccaacacaagaaaacaacccaattacaagatggtaccagaagaccaagtacttcttgttagataattggcaaagagtttgggttatgatgctatggattgggatagtctcagctttgtttgtgtacaaatttattcagtacaagaataaggaagcatttgaagtgatgggctattgtgtttgcatagccaaaggaggagcagagactttgaaattcaacatggcactgattttgttaccagtttgtcgaaacacaattacctggctcagaaacaagaccaaattgggggtggtagtcccgttcgatgataatctgaactttcataaggtcattgcagttggaatagtcatcggggttggattacacgccggagcacatttgacgtgtgattttccgaggctgattcacgcaacggaagaacagtatgagccgatgataccctactttggtaaagaccagcctgagaattactggtggtttttggagggagtggaagggttgactgggattgggattgtggtgttgatgactatagcattcactttggccactccttggtttagaagaaacaagttgaacttgccaaagccgctgaagaaactcacaggtttcaacgccttttggtattcacaccatctatttgtgattgtctacgctctcctcataatccatagcattaaactctacctcactaagaaatggtactacaaaacgacatggatgtatttggcagtgccggttttcctctacgcttgtgaaaggctgatcagattttttagaccaagcatcaagccagtgaagattctcaaggttgctgtttatccgggaaatgtgcttgcactgcacatgtctaagccgcaaggcttcaaatacaagagcgggcagtacatgttcgtcaactgcgccgcagtttctccattcgaatggcatccattttcaattacctcttcaccgggagatgactacctgagcgtccacattagaacactcggggattggactcggcagctcaagaccgttttctcatcggtatgtcagccttcaactgctggtaaaagtgggctactcagagctgacatgcaagaagaaaacaaccccagctttcccaagatactaatcgacggtccatacggagcaccagcacaagactacaagaaatacgacgtcgtgttgctggtcggcctcggaatcggggccacgcccatggtcagcattgtcaaagacatcatcaacaacatgaatttcttgaagaacaaggagctagacgagtacgcagttttggacgacgtactagagagtggcaaggctgttaataacaacaacagcagtagtggcaagagcaacaagagcaataaagggttcaggacccagaaagcttattactattgggtcacgagagaacagggctcgtttgaatggttcaaagggattctcaatgaggtggcagagatggacgaaaagggtgtgatagagttgcacaattactgtaccagtgtgtacgaggaaggtgatgccaggtcagcactgatagccatgcttcagaatctccaccatgccaagaatggcgtagatgtagtctctgggacgcgcgtcaaatcccatttcgccaaacccaattggcgccaagtctacaagaaaatcgcgctgcatcatcctgatagccgagttggtgtgttttactgtggggcaccggcactaacaaaggagctgaggcaattggcgctggacttttctcacaggacctccaccaagttcgagtttcataaagagaatttctag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0006950 GO:0006952 GO:0006970 GO:0007154 GO:0007165 GO:0007231 GO:0008150 GO:0008152 GO:0009266 GO:0009408 GO:0009605 GO:0009607 GO:0009611 GO:0009620 GO:0009628 GO:0009987 GO:0010941 GO:0012505 GO:0016020 GO:0016174 GO:0016491 GO:0016651 GO:0023052 GO:0033500 GO:0033554 GO:0042592 GO:0043067 GO:0043069 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0048519 GO:0048523 GO:0048878 GO:0050664 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0055114 GO:0060548 GO:0065007 GO:0065008 GO:0071214 GO:0071470 GO:0071944 GO:0072593 GO:0098542 GO:0104004

KEGG Pathways

Metabolic & Signaling

ko04016 ko04626 map04016 map04626

Pfam Domains

Protein Families

FAD_binding_8 Ferric_reduct NADPH_Ox NAD_binding_6

Protein Analysis

740

Amino Acids

84.54

Weight (kDa)

8.85

Isoelectric Point (pI)

36.36

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011670)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G47910
fragaria_vesca	FvH4_4g22100 FvH4_4g22100
malus_domestica	MD13G1134500.v1.1 MD16G1145100.v1.1
prunus_persica	Prupe.1G211000_v2.0.a1
pyrus_communis	pycom13g11730 pycom16g11470
rosa_chinensis	RchiOBHm_Chr4g0428361
rosa_laevigata	RLG00000007160
rosa_multiflora	Rmu_co8508821.1_g000001 Rmu_sc0003384.1_g000003 Rmu_sc0010192.1_g000005
rosa_roxburghii	Rroxscaffold_5G00370020
rosa_rugosa	Rorug04G0225000
rosa_samantha	Rh4AG281800 Rh4CG303200 Rh4DG284600
rosa_wichuraiana	Rw4G024470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1611
Acc65I	GGTACC	1 cut(s)	477
AccB1I	GGYRCC	3 cut(s)	477, 2064, 2131
AccB7I	CCANNNNNTGG	1 cut(s)	999
AccBSI	CCGCTC	1 cut(s)	1323
AccI	GTMKAC	2 cut(s)	1095, 2073
AccII	CGCG	3 cut(s)	2032, 2034, 2087
AciI	CCGC	4 cut(s)	1034, 1301, 1323, 1350
AcoI	YGGCCR	1 cut(s)	990
AcsI	RAATTY	5 cut(s)	119, 572, 656, 1684, 2215
AcuI	CTGAAG	3 cut(s)	461, 1058, 1967
AcyI	GRCGYC	3 cut(s)	192, 1608, 2065
AfeI	AGCGCT	1 cut(s)	297
AfiI	CCNNNNNNNGG	3 cut(s)	729, 890, 999
AflIII	ACRYGT	3 cut(s)	827, 1290, 1332
AjiI	CACGTC	1 cut(s)	828
AjnI	CCWGG	2 cut(s)	704, 1958
AloI	GAACNNNNNNTCC	2 cut(s)	245, 277
Alw21I	GWGCWC	3 cut(s)	384, 820, 1582
Alw26I	GTCTC	5 cut(s)	67, 242, 556, 641, 2026
Alw44I	GTGCAC	1 cut(s)	380
AlwNI	CAGNNNCTG	2 cut(s)	427, 439
Ama87I	CYCGRG	1 cut(s)	1433
Aor51HI	AGCGCT	1 cut(s)	297
AoxI	GGCC	3 cut(s)	990, 1624, 1638
ApaLI	GTGCAC	1 cut(s)	380
ApeKI	GCWGC	4 cut(s)	293, 367, 1450, 2089
ApoI	RAATTY	5 cut(s)	119, 572, 656, 1684, 2215
ArsI	GACNNNNNNTTYG	2 cut(s)	131, 163
Asp718I	GGTACC	1 cut(s)	477
AspLEI	GCGC	6 cut(s)	298, 1349, 2034, 2067, 2089, 2167
AspS9I	GGNCC	4 cut(s)	1568, 1638, 1809, 2184
AsuC2I	CCSGG	3 cut(s)	59, 1269, 1398
AsuHPI	GGTGA	3 cut(s)	101, 1386, 1964
AsuII	TTCGAA	1 cut(s)	1365
AvaI	CYCGRG	1 cut(s)	1433
AvaII	GGWCC	3 cut(s)	1568, 1809, 2184
BaeGI	GKGCMC	3 cut(s)	64, 384, 2134
BalI	TGGCCA	1 cut(s)	992
BanI	GGYRCC	3 cut(s)	477, 2064, 2131
BanII	GRGCYC	1 cut(s)	1853
BarI	GAAGNNNNNNTAC	2 cut(s)	476, 508
BauI	CACGAG	1 cut(s)	1837
BbsI	GAAGAC	1 cut(s)	491
Bbv12I	GWGCWC	3 cut(s)	384, 820, 1582
BbvCI	CCTCAGC	1 cut(s)	2153
BbvI	GCAGC	4 cut(s)	305, 354, 1462, 2076
BccI	CCATC	5 cut(s)	191, 468, 604, 1086, 1888
BciT130I	CCWGG	2 cut(s)	706, 1960
BclI	TGATCA	1 cut(s)	1209
BcnI	CCSGG	3 cut(s)	59, 1269, 1398
BcoDI	GTCTC	5 cut(s)	67, 242, 556, 641, 2026
BfaI	CTAG	4 cut(s)	156, 1706, 1736, 2221
BfmI	CTRYAG	1 cut(s)	975
BfoI	RGCGCY	3 cut(s)	299, 2068, 2168
BisI	GCNGC	7 cut(s)	294, 368, 1034, 1301, 1350, 1451, 2090
BlsI	GCNGC	7 cut(s)	295, 369, 1035, 1302, 1351, 1452, 2091
BmcAI	AGTACT	1 cut(s)	494
Bme1390I	CCNGG	5 cut(s)	59, 706, 1269, 1398, 1960
Bme18I	GGWCC	3 cut(s)	1568, 1809, 2184
BmeT110I	CYCGRG	1 cut(s)	1433
BmgBI	CACGTC	1 cut(s)	828
BmgT120I	GGNCC	4 cut(s)	1568, 1638, 1809, 2184
BmiI	GGNNCC	6 cut(s)	161, 479, 1639, 1811, 2066, 2133
BmrFI	CCNGG	5 cut(s)	59, 706, 1269, 1398, 1960
BmrI	ACTGGG	1 cut(s)	957
BmsI	GCATC	6 cut(s)	105, 522, 1239, 1381, 1945, 2101
BmuI	ACTGGG	1 cut(s)	957
BoxI	GACNNNNGTC	1 cut(s)	2033
BpiI	GAAGAC	1 cut(s)	491
BpmI	CTGGAG	1 cut(s)	146
Bpu10I	CCTNAGC	3 cut(s)	282, 1412, 2153
Bpu14I	TTCGAA	1 cut(s)	1365
BpuEI	CTTGAG	2 cut(s)	1235, 1439
BpuMI	CCSGG	3 cut(s)	59, 1269, 1398
BsaBI	GATNNNNATC	2 cut(s)	753, 1559
BsaHI	GRCGYC	3 cut(s)	192, 1608, 2065
BsaJI	CCNNGG	4 cut(s)	839, 998, 1627, 1647
BsaWI	WCCGGW	1 cut(s)	376
BsaXI	ACNNNNNCTCC	4 cut(s)	245, 275, 2171, 2201
Bsc4I	CCNNNNNNNGG	3 cut(s)	729, 890, 999
Bse118I	RCCGGY	3 cut(s)	44, 1180, 2134
Bse1I	ACTGG	5 cut(s)	683, 920, 952, 1238, 1935
Bse3DI	GCAATG	1 cut(s)	774
Bse8I	GATNNNNATC	2 cut(s)	753, 1559
BseBI	CCWGG	2 cut(s)	706, 1960
BseDI	CCNNGG	4 cut(s)	839, 998, 1627, 1647
BseGI	GGATG	3 cut(s)	1170, 1372, 2095
BseJI	GATNNNNATC	2 cut(s)	753, 1559
BseLI	CCNNNNNNNGG	3 cut(s)	729, 890, 999
BseMI	GCAATG	1 cut(s)	774
BseNI	ACTGG	5 cut(s)	683, 920, 952, 1238, 1935
BseRI	GAGGAG	2 cut(s)	654, 1094
BseSI	GKGCMC	3 cut(s)	64, 384, 2134
BseXI	GCAGC	4 cut(s)	305, 354, 1462, 2076
BseYI	CCCAGC	1 cut(s)	1541
BsgI	GTGCAG	1 cut(s)	1271
Bsh1236I	CGCG	3 cut(s)	2032, 2034, 2087
BshFI	GGCC	3 cut(s)	992, 1626, 1640
BshNI	GGYRCC	3 cut(s)	477, 2064, 2131
BsiHKAI	GWGCWC	3 cut(s)	384, 820, 1582
BsiHKCI	CYCGRG	1 cut(s)	1433
BsiSI	CCGG	8 cut(s)	45, 58, 377, 813, 1181, 1268, 1397, 2135
BslFI	GGGAC	2 cut(s)	725, 2041
BslI	CCNNNNNNNGG	3 cut(s)	729, 890, 999
BsmAI	GTCTC	5 cut(s)	67, 242, 556, 641, 2026
BsmBI	CGTCTC	1 cut(s)	67
BsmFI	GGGAC	2 cut(s)	725, 2041
BsmI	GAATGC	1 cut(s)	980
BsnI	GGCC	3 cut(s)	992, 1626, 1640
BsoBI	CYCGRG	1 cut(s)	1433
Bsp119I	TTCGAA	1 cut(s)	1365
Bsp1286I	GDGCHC	6 cut(s)	64, 384, 820, 1582, 1853, 2134
Bsp1407I	TGTACA	1 cut(s)	567
Bsp143I	GATC	1 cut(s)	1209
Bsp19I	CCATGG	1 cut(s)	1647
BspACI	CCGC	4 cut(s)	1034, 1301, 1323, 1350
BspANI	GGCC	3 cut(s)	992, 1626, 1640
BspFNI	CGCG	3 cut(s)	2032, 2034, 2087
BspLI	GGNNCC	6 cut(s)	161, 479, 1639, 1811, 2066, 2133
BspQI	GCTCTTC	1 cut(s)	303
BspT104I	TTCGAA	1 cut(s)	1365
BspT107I	GGYRCC	3 cut(s)	477, 2064, 2131
BsrBI	CCGCTC	1 cut(s)	1323
BsrDI	GCAATG	1 cut(s)	774
BsrFI	RCCGGY	3 cut(s)	44, 1180, 2134
BsrGI	TGTACA	1 cut(s)	567
BsrI	ACTGG	5 cut(s)	683, 920, 952, 1238, 1935
BssAI	RCCGGY	3 cut(s)	44, 1180, 2134
BssECI	CCNNGG	4 cut(s)	839, 998, 1627, 1647
BssMI	GATC	1 cut(s)	1209
BssNI	GRCGYC	3 cut(s)	192, 1608, 2065
BssSI	CACGAG	1 cut(s)	1837
BssT1I	CCWWGG	2 cut(s)	998, 1647
Bst2BI	CACGAG	1 cut(s)	1837
Bst2UI	CCWGG	2 cut(s)	706, 1960
Bst4CI	ACNGT	6 cut(s)	397, 867, 1462, 1568, 1931, 2126
Bst6I	CTCTTC	2 cut(s)	303, 1396
BstACI	GRCGYC	3 cut(s)	192, 1608, 2065
BstAUI	TGTACA	1 cut(s)	567
BstBI	TTCGAA	1 cut(s)	1365
BstC8I	GCNNGC	5 cut(s)	46, 50, 372, 1281, 1325
BstDSI	CCRYGG	1 cut(s)	1647
BstF5I	GGATG	3 cut(s)	1170, 1372, 2095
BstFNI	CGCG	3 cut(s)	2032, 2034, 2087
BstH2I	RGCGCY	3 cut(s)	299, 2068, 2168
BstHHI	GCGC	6 cut(s)	298, 1349, 2034, 2067, 2089, 2167
BstKTI	GATC	1 cut(s)	1212
BstMAI	GTCTC	5 cut(s)	67, 242, 556, 641, 2026
BstMBI	GATC	1 cut(s)	1209
BstMWI	GCNNNNNNNGC	7 cut(s)	1033, 1285, 1776, 1791, 1964, 1973, 2164
BstNI	CCWGG	2 cut(s)	706, 1960
BstNSI	RCATGY	3 cut(s)	1294, 1336, 1525
BstPAI	GACNNNNGTC	1 cut(s)	2033
BstSCI	CCNGG	5 cut(s)	57, 704, 1267, 1396, 1958
BstSFI	CTRYAG	1 cut(s)	975
BstSLI	GKGCMC	3 cut(s)	64, 384, 2134
BstUI	CGCG	3 cut(s)	2032, 2034, 2087
BstV1I	GCAGC	4 cut(s)	305, 354, 1462, 2076
BstV2I	GAAGAC	1 cut(s)	491
BstXI	CCANNNNNNTGG	2 cut(s)	1368, 1648
BsuRI	GGCC	3 cut(s)	992, 1626, 1640
BtgI	CCRYGG	1 cut(s)	1647
BtrI	CACGTC	1 cut(s)	828
BtsCI	GGATG	3 cut(s)	1170, 1372, 2095
BtsI	GCAGTG	2 cut(s)	1182, 1283
BtsIMutI	CAGTG	7 cut(s)	247, 668, 1182, 1245, 1283, 1942, 1967
Cac8I	GCNNGC	5 cut(s)	46, 50, 372, 1281, 1325
CaiI	CAGNNNCTG	2 cut(s)	427, 439
CfoI	GCGC	6 cut(s)	298, 1349, 2034, 2067, 2089, 2167
Cfr10I	RCCGGY	3 cut(s)	44, 1180, 2134
Cfr13I	GGNCC	4 cut(s)	1568, 1638, 1809, 2184
CseI	GACGC	5 cut(s)	84, 200, 1405, 2023, 2038
CspCI	CAANNNNNGTGG	2 cut(s)	67, 102
DinI	GGCGCC	1 cut(s)	2066
DpnI	GATC	1 cut(s)	1211
DpnII	GATC	1 cut(s)	1209
EaeI	YGGCCR	1 cut(s)	990
Eam1104I	CTCTTC	2 cut(s)	303, 1396
EarI	CTCTTC	2 cut(s)	303, 1396
Eco130I	CCWWGG	2 cut(s)	998, 1647
Eco24I	GRGCYC	1 cut(s)	1853
Eco47I	GGWCC	3 cut(s)	1568, 1809, 2184
Eco47III	AGCGCT	1 cut(s)	297
Eco57I	CTGAAG	3 cut(s)	461, 1058, 1967
Eco88I	CYCGRG	1 cut(s)	1433
EcoO109I	RGGNCCY	2 cut(s)	1809, 2184
EcoRI	GAATTC	1 cut(s)	119
EcoRII	CCWGG	2 cut(s)	704, 1958
EcoT14I	CCWWGG	2 cut(s)	998, 1647
EcoT38I	GRGCYC	1 cut(s)	1853
EgeI	GGCGCC	1 cut(s)	2066
EheI	GGCGCC	1 cut(s)	2066
ErhI	CCWWGG	2 cut(s)	998, 1647
Esp3I	CGTCTC	1 cut(s)	67
FalI	AAGNNNNNCTT	4 cut(s)	482, 514, 1007, 1039
FaqI	GGGAC	2 cut(s)	725, 2041
FauI	CCCGC	1 cut(s)	1316
FbaI	TGATCA	1 cut(s)	1209
FblI	GTMKAC	2 cut(s)	1095, 2073
Fnu4HI	GCNGC	7 cut(s)	294, 368, 1034, 1301, 1350, 1451, 2090
FokI	GGATG	3 cut(s)	1177, 1359, 2082
FriOI	GRGCYC	1 cut(s)	1853
Fsp4HI	GCNGC	7 cut(s)	294, 368, 1034, 1301, 1350, 1451, 2090
FspBI	CTAG	4 cut(s)	156, 1706, 1736, 2221
GlaI	GCGC	6 cut(s)	297, 1348, 2033, 2066, 2088, 2166
GluI	GCNGC	7 cut(s)	294, 368, 1034, 1301, 1350, 1451, 2090
GsaI	CCCAGC	1 cut(s)	1545
GsuI	CTGGAG	1 cut(s)	146
HaeII	RGCGCY	3 cut(s)	299, 2068, 2168
HaeIII	GGCC	3 cut(s)	992, 1626, 1640
HapII	CCGG	8 cut(s)	45, 58, 377, 813, 1181, 1268, 1397, 2135
HgaI	GACGC	5 cut(s)	84, 200, 1405, 2023, 2038
HhaI	GCGC	6 cut(s)	298, 1349, 2034, 2067, 2089, 2167
Hin1I	GRCGYC	3 cut(s)	192, 1608, 2065
Hin6I	GCGC	6 cut(s)	296, 1347, 2032, 2065, 2087, 2165
HinP1I	GCGC	6 cut(s)	296, 1347, 2032, 2065, 2087, 2165
HincII	GTYRAC	2 cut(s)	945, 1342
HindII	GTYRAC	2 cut(s)	945, 1342
HindIII	AAGCTT	1 cut(s)	1818
HpaII	CCGG	8 cut(s)	45, 58, 377, 813, 1181, 1268, 1397, 2135
HphI	GGTGA	3 cut(s)	101, 1386, 1964
Hpy166II	GTNNAC	8 cut(s)	382, 568, 945, 1096, 1342, 1420, 1942, 2074
Hpy188III	TCNNGA	7 cut(s)	163, 284, 1456, 1690, 1807, 1837, 2099
Hpy8I	GTNNAC	8 cut(s)	382, 568, 945, 1096, 1342, 1420, 1942, 2074
Hpy99I	CGWCG	4 cut(s)	1568, 1610, 1613, 1733
HpyAV	CCTTC	3 cut(s)	932, 1494, 1943
HpyCH4III	ACNGT	6 cut(s)	397, 867, 1462, 1568, 1931, 2126
HpyCH4IV	ACGT	4 cut(s)	12, 827, 1608, 1731
HpyF10VI	GCNNNNNNNGC	7 cut(s)	1033, 1285, 1776, 1791, 1964, 1973, 2164
HpySE526I	ACGT	4 cut(s)	12, 827, 1608, 1731
Hsp92I	GRCGYC	3 cut(s)	192, 1608, 2065
HspAI	GCGC	6 cut(s)	296, 1347, 2032, 2065, 2087, 2165
KasI	GGCGCC	1 cut(s)	2064
KpnI	GGTACC	1 cut(s)	481
KroI	GCCGGC	1 cut(s)	44
KroNI	GCCGGC	1 cut(s)	46
Ksp22I	TGATCA	1 cut(s)	1209
Kzo9I	GATC	1 cut(s)	1209
LguI	GCTCTTC	1 cut(s)	303
LmnI	GCTCC	8 cut(s)	127, 165, 379, 641, 815, 1577, 1702, 2149
Lsp1109I	GCAGC	4 cut(s)	305, 354, 1462, 2076
LweI	GCATC	6 cut(s)	105, 522, 1239, 1381, 1945, 2101
MaeI	CTAG	4 cut(s)	156, 1706, 1736, 2221
MaeII	ACGT	4 cut(s)	12, 827, 1608, 1731
MaeIII	GTNAC	3 cut(s)	391, 678, 1834
MalI	GATC	1 cut(s)	1211
MbiI	CCGCTC	1 cut(s)	1323
MboI	GATC	1 cut(s)	1209
MfeI	CAATTG	2 cut(s)	2059, 2159
MhlI	GDGCHC	6 cut(s)	64, 384, 820, 1582, 1853, 2134
MlsI	TGGCCA	1 cut(s)	992
MluNI	TGGCCA	1 cut(s)	992
Mly113I	GGCGCC	1 cut(s)	2065
MlyI	GAGTC	5 cut(s)	38, 146, 427, 439, 1438
MmeI	TCCRAC	3 cut(s)	288, 763, 781
Mox20I	TGGCCA	1 cut(s)	992
MreI	CGCCGGCG	1 cut(s)	44
MroNI	GCCGGC	1 cut(s)	44
MscI	TGGCCA	1 cut(s)	992
MseI	TTAA	2 cut(s)	1122, 1755
MslI	CAYNNNNRTG	3 cut(s)	1366, 1474, 1646
Msp20I	TGGCCA	1 cut(s)	992
MspA1I	CMGCKG	1 cut(s)	1036
MspI	CCGG	8 cut(s)	45, 58, 377, 813, 1181, 1268, 1397, 2135
MspR9I	CCNGG	5 cut(s)	59, 706, 1269, 1398, 1960
MunI	CAATTG	2 cut(s)	2059, 2159
Mva1269I	GAATGC	1 cut(s)	980
MvaI	CCWGG	2 cut(s)	706, 1960
MvnI	CGCG	3 cut(s)	2032, 2034, 2087
MwoI	GCNNNNNNNGC	7 cut(s)	1033, 1285, 1776, 1791, 1964, 1973, 2164
NaeI	GCCGGC	1 cut(s)	46
NarI	GGCGCC	1 cut(s)	2065
NciI	CCSGG	3 cut(s)	59, 1269, 1398
NcoI	CCATGG	1 cut(s)	1647
NdeII	GATC	1 cut(s)	1209
NgoMIV	GCCGGC	1 cut(s)	44
NlaIV	GGNNCC	6 cut(s)	161, 479, 1639, 1811, 2066, 2133
NmeAIII	GCCGAG	3 cut(s)	434, 1426, 2132
NmuCI	GTSAC	2 cut(s)	391, 1834
NspI	RCATGY	3 cut(s)	1294, 1336, 1525
NspV	TTCGAA	1 cut(s)	1365
PciI	ACATGT	2 cut(s)	1290, 1332
PciSI	GCTCTTC	1 cut(s)	303
PcsI	WCGNNNNNNNCGW	1 cut(s)	147
PctI	GAATGC	1 cut(s)	980
PdiI	GCCGGC	1 cut(s)	46
PfeI	GAWTC	6 cut(s)	204, 847, 1246, 1632, 1873, 1987
PflMI	CCANNNNNTGG	1 cut(s)	999
PfoI	TCCNGGA	1 cut(s)	1267
PkrI	GCNGC	7 cut(s)	295, 369, 1035, 1302, 1351, 1452, 2091
PleI	GAGTC	5 cut(s)	37, 146, 426, 438, 1438
PluTI	GGCGCC	1 cut(s)	2068
PpsI	GAGTC	5 cut(s)	37, 146, 426, 438, 1438
PpuMI	RGGWCCY	2 cut(s)	1809, 2184
PscI	ACATGT	2 cut(s)	1290, 1332
PshAI	GACNNNNGTC	1 cut(s)	2033
Psp5II	RGGWCCY	2 cut(s)	1809, 2184
Psp6I	CCWGG	2 cut(s)	704, 1958
PspFI	CCCAGC	1 cut(s)	1541
PspGI	CCWGG	2 cut(s)	704, 1958
PspN4I	GGNNCC	6 cut(s)	161, 479, 1639, 1811, 2066, 2133
PspPI	GGNCC	4 cut(s)	1568, 1638, 1809, 2184
PspPPI	RGGWCCY	2 cut(s)	1809, 2184
PstNI	CAGNNNCTG	2 cut(s)	427, 439
RseI	CAYNNNNRTG	3 cut(s)	1366, 1474, 1646
SapI	GCTCTTC	1 cut(s)	303
SaqAI	TTAA	2 cut(s)	1122, 1755
SatI	GCNGC	7 cut(s)	294, 368, 1034, 1301, 1350, 1451, 2090
Sau3AI	GATC	1 cut(s)	1209
Sau96I	GGNCC	4 cut(s)	1568, 1638, 1809, 2184
ScaI	AGTACT	1 cut(s)	494
SchI	GAGTC	5 cut(s)	38, 146, 427, 439, 1438
ScrFI	CCNGG	5 cut(s)	59, 706, 1269, 1398, 1960
SduI	GDGCHC	6 cut(s)	64, 384, 820, 1582, 1853, 2134
SfaNI	GCATC	6 cut(s)	105, 522, 1239, 1381, 1945, 2101
SfcI	CTRYAG	1 cut(s)	975
SfoI	GGCGCC	1 cut(s)	2066
SfuI	TTCGAA	1 cut(s)	1365
SgrAI	CRCCGGYG	1 cut(s)	44
SinI	GGWCC	3 cut(s)	1568, 1809, 2184
SmiMI	CAYNNNNRTG	3 cut(s)	1366, 1474, 1646
SmlI	CTYRAG	2 cut(s)	1250, 1454
SmoI	CTYRAG	2 cut(s)	1250, 1454
SsiI	CCGC	4 cut(s)	1034, 1301, 1323, 1350
SspDI	GGCGCC	1 cut(s)	2064
SspMI	CTAG	4 cut(s)	156, 1706, 1736, 2221
StyD4I	CCNGG	5 cut(s)	57, 704, 1267, 1396, 1958
StyI	CCWWGG	2 cut(s)	998, 1647
TaaI	ACNGT	6 cut(s)	397, 867, 1462, 1568, 1931, 2126
TaiI	ACGT	4 cut(s)	15, 830, 1611, 1734
TaqI	TCGA	6 cut(s)	150, 691, 747, 1365, 1563, 2199
TaqII	GACCGA	1 cut(s)	379
TatI	WGTACW	4 cut(s)	492, 567, 582, 1329
TauI	GCSGC	3 cut(s)	1036, 1303, 1352
TfiI	GAWTC	6 cut(s)	204, 847, 1246, 1632, 1873, 1987
Tru1I	TTAA	2 cut(s)	1122, 1755
Tru9I	TTAA	2 cut(s)	1122, 1755
TscAI	CASTG	7 cut(s)	247, 675, 1182, 1245, 1290, 1942, 1974
TseFI	GTSAC	2 cut(s)	391, 1834
TseI	GCWGC	4 cut(s)	293, 367, 1450, 2089
Tsp45I	GTSAC	2 cut(s)	391, 1834
TspDTI	ATGAA	4 cut(s)	35, 755, 1697, 2195
TspGWI	ACGGA	2 cut(s)	872, 1590
TspRI	CASTG	7 cut(s)	247, 675, 1182, 1245, 1290, 1942, 1974
Van91I	CCANNNNNTGG	1 cut(s)	999
VneI	GTGCAC	1 cut(s)	380
VpaK11BI	GGWCC	3 cut(s)	1568, 1809, 2184
XapI	RAATTY	5 cut(s)	119, 572, 656, 1684, 2215
XceI	RCATGY	3 cut(s)	1294, 1336, 1525
XcmI	CCANNNNNNNNNTGG	3 cut(s)	471, 730, 2003
XmiI	GTMKAC	2 cut(s)	1095, 2073
XspI	CTAG	4 cut(s)	156, 1706, 1736, 2221
ZraI	GACGTC	1 cut(s)	1609
ZrmI	AGTACT	1 cut(s)	494

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.