Rmu_sc0000012.1_g000010

structural constituent of ribosome

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000012.1
OG0018253
Physical Location & Seq
Forward (+)
55121 .. 57375
2255 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1836 bp
atggccgcagagattgttgatccagatgattatcgtaagagatatttggaaatttctatagccctattcaatttgcatgactcagcgatcaaatttgtcaaaagccgcatttctacacctcaagtactccctaacaaagaagaccatgaccagagaaagagacttgttgaggagatgaaagaagcatttaccagttctgcaagttatttagagtttaacaaattgaaagaaggattaaaaggagtagagatgagctgtatgcagtggatcaaactcaaagagttcgatgaagatataattgtggaggaaataaagtctcaatcagttagtcttggaactcgcctttctactagggctgggcgtccggacccagctatggaagatggtactggtatagaggattcaaattctggtataggtgtggcatatgacatgattcttcccctattcaaaatagttgatcaagaaatgaagaaggaaataaatattgacattgatgtcaaaaatagtacaagcagctggtatgaatcagaacaagaaattaataaagttcttgatcaatttgtacttgtacttttaacgttggacacacttctgagctgtccaatgctggaagagcgaatgttgcaattgctgggaaatggacttacaaggttggagacaagagtgaacaagtttgaaagtatggtgaatgaaataaagggaaaattcagcattaacagtacgggtttgatggcaatggatgcatttcttgtggaacataacacagaacagagatggctggatttgatcaaattggagggccattcaggagagaggcctgaaaaaagacagatggcaggtgatatctctgaagaaggaactttcagagatgcagagcagcgcttgaagatatgtcgagcaacatttgaggatcaggtcaaggtggtcctgaaattcaaggattttaacgaacctaaccgcatagccgtagactttggcaagttctatgttgctagagtgacttctatacacttttatagaaagtctgatcctgcagcacctgggaggcaggagttcctttctgagataagaaatcctgaatggcctttttctgtttctaggccttactttgaaagagttacagcaactcaaggatataatgccactagaaatagaaagagtgtaaggcaattgcttgaagagcaccagcctgtgcccggaacaaaattggagagtctaaaggcgtatgcagttcatcttgggactcaaatctctaaacatcttgtcaagctcatactgatgctgaagtcagaaggaataccagaaatggttctaaaaatcaagaacttggagtctctgtttccttttttactggagttgttcacttgctcaggtcctgctgggtatggagtggtttacagaaagataattacaatcataagcctagcagaccaagaactgaagacggttcaaaatttaaaccaaggaaacattgctgatcaagttgttactaattggtatgcaagcatgacagaagcagaaatcgatgacattctcgatgactttgcagagattattgcaacattggagtctaatctgagctttccactgctgttgttcggcatagcttctcccaacttatttagcctggagaaaacccactttttaccggtggagaacgatctgaatggcgtgcatgatatagagggtgtggatgatgtggtgggtatggaagaggtggtggaagggatggaggaattatacaatgatcagaaggatactcctactttagtgaggcaagctctggagaaaatgaaagggcccatagaacaagtgtgggagggtttgacatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000184 GO:0000956 GO:0002181 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003735 GO:0003824 GO:0004518 GO:0004519 GO:0005198 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0006139 GO:0006364 GO:0006396 GO:0006401 GO:0006402 GO:0006412 GO:0006413 GO:0006518 GO:0006605 GO:0006612 GO:0006613 GO:0006614 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0007275 GO:0008104 GO:0008150 GO:0008152 GO:0008270 GO:0009056 GO:0009057 GO:0009058 GO:0009059 GO:0009451 GO:0009507 GO:0009536 GO:0009790 GO:0009791 GO:0009793 GO:0009892 GO:0009987 GO:0010154 GO:0010467 GO:0010468 GO:0010605 GO:0010629 GO:0015031 GO:0015833 GO:0015934 GO:0016020 GO:0016070 GO:0016071 GO:0016072 GO:0016787 GO:0016788 GO:0019222 GO:0019439 GO:0019538 GO:0019843 GO:0022414 GO:0022613 GO:0022625 GO:0022626 GO:0032501 GO:0032502 GO:0032991 GO:0033036 GO:0033365 GO:0034470 GO:0034613 GO:0034641 GO:0034645 GO:0034655 GO:0034660 GO:0042254 GO:0042273 GO:0042886 GO:0043021 GO:0043043 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0043603 GO:0043604 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044265 GO:0044267 GO:0044270 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0044877 GO:0045047 GO:0045184 GO:0046483 GO:0046700 GO:0046872 GO:0046907 GO:0046914 GO:0048316 GO:0048519 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0060255 GO:0061458 GO:0065007 GO:0070727 GO:0070972 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0072599 GO:0072657 GO:0090150 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901361 GO:1901363 GO:1901564 GO:1901566 GO:1901575 GO:1901576 GO:1990904
KEGG Pathways
Metabolic & Signaling
ko00230 ko01100 ko01110 ko01130 ko03010 map00230 map01100 map01110 map01130 map03010
Pfam Domains
Protein Families
Ribosomal_L35Ae

Protein Analysis

611

Amino Acids

69.54

Weight (kDa)

4.96

Isoelectric Point (pI)

38.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0018253)

Species Orthologous Gene IDs
rosa_laevigata RLG00000032228
rosa_multiflora Rmu_sc0000012.1_g000010 Rmu_sc0000012.1_g000011
rosa_roxburghii Rroxscaffold_1G00060710
rosa_rugosa Rorug05G0029900 Rorug05G0029900
rosa_samantha Rh5AG123500 Rh5BG122400 Rh5CG133800 Rh5DG121800
rosa_wichuraiana Rw5G010660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 830
AasI GACNNNNNNGTC 1 cut(s) 497
Acc36I ACCTGC 1 cut(s) 830
AccI GTMKAC 1 cut(s) 972
AccIII TCCGGA 1 cut(s) 364
AciI CCGC 3 cut(s) 6, 106, 961
AclI AACGTT 1 cut(s) 581
AclWI GGATC 4 cut(s) 14, 275, 921, 1025
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 6 cut(s) 51, 92, 406, 707, 935, 1456
AcuI CTGAAG 3 cut(s) 873, 1307, 1463
AcyI GRCGYC 1 cut(s) 361
AfaI GTAC 6 cut(s) 126, 388, 511, 567, 573, 724
AfeI AGCGCT 1 cut(s) 884
AfiI CCNNNNNNNGG 2 cut(s) 376, 1199
AgeI ACCGGT 1 cut(s) 1651
AjnI CCWGG 2 cut(s) 1042, 1629
AluBI AGCT 8 cut(s) 255, 374, 519, 600, 1273, 1584, 1610, 1784
AluI AGCT 8 cut(s) 255, 374, 519, 600, 1273, 1584, 1610, 1784
Alw21I GWGCWC 1 cut(s) 1188
Alw26I GTCTC 4 cut(s) 154, 321, 653, 1341
AlwI GGATC 4 cut(s) 14, 275, 921, 1025
AlwNI CAGNNNCTG 2 cut(s) 1043, 1379
Aor13HI TCCGGA 1 cut(s) 364
Aor51HI AGCGCT 1 cut(s) 884
AoxI GGCC 6 cut(s) 3, 802, 818, 1085, 1103, 1802
ApaI GGGCCC 1 cut(s) 1806
ApeKI GCWGC 3 cut(s) 516, 880, 1037
ApoI RAATTY 6 cut(s) 51, 92, 406, 707, 935, 1456
AseI ATTAAT 1 cut(s) 543
AsiGI ACCGGT 1 cut(s) 1651
Asp700I GAANNNNTTC 1 cut(s) 1311
AspLEI GCGC 1 cut(s) 885
AspS9I GGNCC 6 cut(s) 367, 802, 928, 1376, 1802, 1803
AsuC2I CCSGG 1 cut(s) 1200
AsuHPI GGTGA 2 cut(s) 700, 854
AvaII GGWCC 3 cut(s) 367, 928, 1376
BaeGI GKGCMC 2 cut(s) 1200, 1806
BanII GRGCYC 1 cut(s) 1806
BbsI GAAGAC 2 cut(s) 147, 1451
Bbv12I GWGCWC 1 cut(s) 1188
BbvI GCAGC 3 cut(s) 528, 892, 1049
BccI CCATC 5 cut(s) 377, 727, 771, 829, 1726
BceAI ACGGC 1 cut(s) 953
BcgI CGANNNNNNTGC 2 cut(s) 1529, 1563
BciT130I CCWGG 2 cut(s) 1044, 1631
BciVI GTATCC 1 cut(s) 1753
BclI TGATCA 5 cut(s) 460, 556, 789, 1480, 1750
BcnI CCSGG 1 cut(s) 1200
BcoDI GTCTC 4 cut(s) 154, 321, 653, 1341
BfaI CTAG 5 cut(s) 351, 996, 1101, 1149, 1427
BfmI CTRYAG 2 cut(s) 57, 1035
BfoI RGCGCY 1 cut(s) 886
BfuAI ACCTGC 1 cut(s) 830
BfuI GTATCC 1 cut(s) 1753
BisI GCNGC 5 cut(s) 6, 106, 517, 881, 1038
BlsI GCNGC 5 cut(s) 7, 107, 518, 882, 1039
BmcAI AGTACT 1 cut(s) 126
Bme1390I CCNGG 3 cut(s) 1044, 1200, 1631
Bme18I GGWCC 3 cut(s) 367, 928, 1376
BmgT120I GGNCC 6 cut(s) 367, 802, 928, 1376, 1802, 1803
BmiI GGNNCC 2 cut(s) 369, 1804
BmrFI CCNGG 3 cut(s) 1044, 1200, 1631
BmsI GCATC 3 cut(s) 733, 862, 1272
BpiI GAAGAC 2 cut(s) 147, 1451
BplI GAGNNNNNCTC 2 cut(s) 1768, 1800
BpmI CTGGAG 3 cut(s) 1376, 1652, 1808
Bpu10I CCTNAGC 1 cut(s) 1372
BpuEI CTTGAG 2 cut(s) 105, 1116
BpuMI CCSGG 1 cut(s) 1200
Bsa29I ATCGAT 1 cut(s) 1527
BsaBI GATNNNNATC 1 cut(s) 30
BsaHI GRCGYC 1 cut(s) 361
BsaJI CCNNGG 2 cut(s) 1043, 1465
BsaWI WCCGGW 2 cut(s) 364, 1651
BsaXI ACNNNNNCTCC 2 cut(s) 1325, 1355
Bsc4I CCNNNNNNNGG 2 cut(s) 376, 1199
Bse118I RCCGGY 1 cut(s) 1651
Bse1I ACTGG 3 cut(s) 192, 394, 1359
Bse3DI GCAATG 2 cut(s) 744, 1473
Bse8I GATNNNNATC 1 cut(s) 30
BseAI TCCGGA 1 cut(s) 364
BseBI CCWGG 2 cut(s) 1044, 1631
BseCI ATCGAT 1 cut(s) 1527
BseDI CCNNGG 2 cut(s) 1043, 1465
BseGI GGATG 3 cut(s) 748, 1702, 1737
BseJI GATNNNNATC 1 cut(s) 30
BseLI CCNNNNNNNGG 2 cut(s) 376, 1199
BseMI GCAATG 2 cut(s) 744, 1473
BseMII CTCAG 5 cut(s) 96, 587, 1056, 1386, 1571
BseNI ACTGG 3 cut(s) 192, 394, 1359
BseRI GAGGAG 1 cut(s) 185
BseSI GKGCMC 2 cut(s) 1200, 1806
BseXI GCAGC 3 cut(s) 528, 892, 1049
BseYI CCCAGC 4 cut(s) 356, 370, 634, 1382
BshFI GGCC 6 cut(s) 5, 804, 820, 1087, 1105, 1804
BshTI ACCGGT 1 cut(s) 1651
BshVI ATCGAT 1 cut(s) 1527
BsiHKAI GWGCWC 1 cut(s) 1188
BsiSI CCGG 3 cut(s) 365, 1200, 1652
BslFI GGGAC 1 cut(s) 1258
BslI CCNNNNNNNGG 2 cut(s) 376, 1199
BsmAI GTCTC 4 cut(s) 154, 321, 653, 1341
BsmFI GGGAC 1 cut(s) 1258
BsnI GGCC 6 cut(s) 5, 804, 820, 1087, 1105, 1804
Bsp120I GGGCCC 1 cut(s) 1802
Bsp1286I GDGCHC 3 cut(s) 1188, 1200, 1806
Bsp13I TCCGGA 1 cut(s) 364
BspACI CCGC 3 cut(s) 6, 106, 961
BspANI GGCC 6 cut(s) 5, 804, 820, 1087, 1105, 1804
BspCNI CTCAG 5 cut(s) 95, 588, 1057, 1385, 1572
BspDI ATCGAT 1 cut(s) 1527
BspEI TCCGGA 1 cut(s) 364
BspLI GGNNCC 2 cut(s) 369, 1804
BspMAI CTGCAG 1 cut(s) 1039
BspMI ACCTGC 1 cut(s) 830
BspPI GGATC 4 cut(s) 14, 275, 921, 1025
BspQI GCTCTTC 2 cut(s) 609, 1176
BsrDI GCAATG 2 cut(s) 744, 1473
BsrFI RCCGGY 1 cut(s) 1651
BsrI ACTGG 3 cut(s) 192, 394, 1359
BssAI RCCGGY 1 cut(s) 1651
BssECI CCNNGG 2 cut(s) 1043, 1465
BssNI GRCGYC 1 cut(s) 361
BssT1I CCWWGG 1 cut(s) 1465
Bst2UI CCWGG 2 cut(s) 1044, 1631
Bst4CI ACNGT 2 cut(s) 722, 1450
Bst6I CTCTTC 3 cut(s) 609, 1176, 1710
BstACI GRCGYC 1 cut(s) 361
BstAPI GCANNNNNTGC 1 cut(s) 743
BstC8I GCNNGC 3 cut(s) 1507, 1676, 1782
BstDEI CTNAG 5 cut(s) 82, 596, 1065, 1372, 1580
BstF5I GGATG 3 cut(s) 748, 1702, 1737
BstH2I RGCGCY 1 cut(s) 886
BstHHI GCGC 1 cut(s) 885
BstMAI GTCTC 4 cut(s) 154, 321, 653, 1341
BstMWI GCNNNNNNNGC 4 cut(s) 616, 625, 743, 1183
BstNI CCWGG 2 cut(s) 1044, 1631
BstSCI CCNGG 3 cut(s) 1042, 1198, 1629
BstSFI CTRYAG 2 cut(s) 57, 1035
BstSLI GKGCMC 2 cut(s) 1200, 1806
BstV1I GCAGC 3 cut(s) 528, 892, 1049
BstV2I GAAGAC 2 cut(s) 147, 1451
Bsu15I ATCGAT 1 cut(s) 1527
BsuI GTATCC 1 cut(s) 1753
BsuRI GGCC 6 cut(s) 5, 804, 820, 1087, 1105, 1804
BsuTUI ATCGAT 1 cut(s) 1527
BtsCI GGATG 3 cut(s) 748, 1702, 1737
BtsI GCAGTG 2 cut(s) 269, 1589
BtsIMutI CAGTG 2 cut(s) 269, 1589
BveI ACCTGC 1 cut(s) 830
Cac8I GCNNGC 3 cut(s) 1507, 1676, 1782
CaiI CAGNNNCTG 2 cut(s) 1043, 1379
CfoI GCGC 1 cut(s) 885
Cfr10I RCCGGY 1 cut(s) 1651
Cfr13I GGNCC 6 cut(s) 367, 802, 928, 1376, 1802, 1803
ClaI ATCGAT 1 cut(s) 1527
CseI GACGC 1 cut(s) 350
Csp6I GTAC 6 cut(s) 125, 387, 510, 566, 572, 723
CspAI ACCGGT 1 cut(s) 1651
CspCI CAANNNNNGTGG 2 cut(s) 1578, 1613
CviAII CATG 6 cut(s) 77, 146, 433, 1510, 1679, 1833
CviQI GTAC 6 cut(s) 125, 387, 510, 566, 572, 723
DdeI CTNAG 5 cut(s) 82, 596, 1065, 1372, 1580
DraI TTTAAA 1 cut(s) 1461
DrdI GACNNNNNNGTC 1 cut(s) 497
DseDI GACNNNNNNGTC 1 cut(s) 497
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 3 cut(s) 609, 1176, 1710
EarI CTCTTC 3 cut(s) 609, 1176, 1710
Eco130I CCWWGG 1 cut(s) 1465
Eco147I AGGCCT 2 cut(s) 820, 1105
Eco24I GRGCYC 1 cut(s) 1806
Eco32I GATATC 1 cut(s) 847
Eco47I GGWCC 3 cut(s) 367, 928, 1376
Eco47III AGCGCT 1 cut(s) 884
Eco57I CTGAAG 3 cut(s) 873, 1307, 1463
EcoO109I RGGNCCY 2 cut(s) 1376, 1802
EcoRII CCWGG 2 cut(s) 1042, 1629
EcoRV GATATC 1 cut(s) 847
EcoT14I CCWWGG 1 cut(s) 1465
EcoT22I ATGCAT 1 cut(s) 748
EcoT38I GRGCYC 1 cut(s) 1806
ErhI CCWWGG 1 cut(s) 1465
FaeI CATG 6 cut(s) 80, 149, 436, 1513, 1682, 1836
FaqI GGGAC 1 cut(s) 1258
FatI CATG 6 cut(s) 76, 145, 432, 1509, 1678, 1832
FauNDI CATATG 1 cut(s) 427
FbaI TGATCA 5 cut(s) 460, 556, 789, 1480, 1750
FblI GTMKAC 1 cut(s) 972
Fnu4HI GCNGC 5 cut(s) 6, 106, 517, 881, 1038
FokI GGATG 3 cut(s) 755, 1709, 1744
FriOI GRGCYC 1 cut(s) 1806
Fsp4HI GCNGC 5 cut(s) 6, 106, 517, 881, 1038
FspBI CTAG 5 cut(s) 351, 996, 1101, 1149, 1427
GlaI GCGC 1 cut(s) 884
GluI GCNGC 5 cut(s) 6, 106, 517, 881, 1038
GsaI CCCAGC 4 cut(s) 360, 374, 638, 1386
GsuI CTGGAG 3 cut(s) 1376, 1652, 1808
HaeII RGCGCY 1 cut(s) 886
HaeIII GGCC 6 cut(s) 5, 804, 820, 1087, 1105, 1804
HapII CCGG 3 cut(s) 365, 1200, 1652
HgaI GACGC 1 cut(s) 350
HhaI GCGC 1 cut(s) 885
Hin1I GRCGYC 1 cut(s) 361
Hin1II CATG 6 cut(s) 80, 149, 436, 1513, 1682, 1836
Hin6I GCGC 1 cut(s) 883
HinP1I GCGC 1 cut(s) 883
HinfI GANTC 8 cut(s) 80, 401, 436, 527, 1216, 1246, 1334, 1571
HpaII CCGG 3 cut(s) 365, 1200, 1652
HphI GGTGA 2 cut(s) 700, 854
Hpy166II GTNNAC 4 cut(s) 670, 973, 1365, 1399
Hpy8I GTNNAC 4 cut(s) 670, 973, 1365, 1399
HpyAV CCTTC 6 cut(s) 224, 469, 851, 1289, 1721, 1750
HpyCH4III ACNGT 2 cut(s) 722, 1450
HpyCH4IV ACGT 1 cut(s) 581
HpyF10VI GCNNNNNNNGC 4 cut(s) 616, 625, 743, 1183
HpyF3I CTNAG 5 cut(s) 82, 596, 1065, 1372, 1580
HpySE526I ACGT 1 cut(s) 581
Hsp92I GRCGYC 1 cut(s) 361
Hsp92II CATG 6 cut(s) 80, 149, 436, 1513, 1682, 1836
HspAI GCGC 1 cut(s) 883
Kpn2I TCCGGA 1 cut(s) 364
Ksp22I TGATCA 5 cut(s) 460, 556, 789, 1480, 1750
LguI GCTCTTC 2 cut(s) 609, 1176
Lsp1109I GCAGC 3 cut(s) 528, 892, 1049
LweI GCATC 3 cut(s) 733, 862, 1272
MaeI CTAG 5 cut(s) 351, 996, 1101, 1149, 1427
MaeII ACGT 1 cut(s) 581
MaeIII GTNAC 3 cut(s) 1000, 1120, 1489
MfeI CAATTG 2 cut(s) 629, 1172
MhlI GDGCHC 3 cut(s) 1188, 1200, 1806
MlyI GAGTC 5 cut(s) 74, 1225, 1240, 1343, 1580
MmeI TCCRAC 2 cut(s) 564, 636
Mph1103I ATGCAT 1 cut(s) 748
MroI TCCGGA 1 cut(s) 364
MroXI GAANNNNTTC 1 cut(s) 1311
MseI TTAA 7 cut(s) 216, 236, 543, 578, 717, 948, 1460
MslI CAYNNNNRTG 1 cut(s) 1280
MspA1I CMGCKG 1 cut(s) 519
MspI CCGG 3 cut(s) 365, 1200, 1652
MspR9I CCNGG 3 cut(s) 1044, 1200, 1631
MunI CAATTG 2 cut(s) 629, 1172
MvaI CCWGG 2 cut(s) 1044, 1631
MwoI GCNNNNNNNGC 4 cut(s) 616, 625, 743, 1183
NciI CCSGG 1 cut(s) 1200
NdeI CATATG 1 cut(s) 427
NlaIII CATG 6 cut(s) 80, 149, 436, 1513, 1682, 1836
NlaIV GGNNCC 2 cut(s) 369, 1804
NmuCI GTSAC 1 cut(s) 1000
NsiI ATGCAT 1 cut(s) 748
PaqCI CACCTGC 1 cut(s) 830
PceI AGGCCT 2 cut(s) 820, 1105
PciSI GCTCTTC 2 cut(s) 609, 1176
PdmI GAANNNNTTC 1 cut(s) 1311
PfeI GAWTC 3 cut(s) 401, 436, 527
PinAI ACCGGT 1 cut(s) 1651
PkrI GCNGC 5 cut(s) 7, 107, 518, 882, 1039
PleI GAGTC 5 cut(s) 74, 1224, 1240, 1342, 1579
PpsI GAGTC 5 cut(s) 74, 1224, 1240, 1342, 1579
PpuMI RGGWCCY 1 cut(s) 1376
PshBI ATTAAT 1 cut(s) 543
Psp1406I AACGTT 1 cut(s) 581
Psp5II RGGWCCY 1 cut(s) 1376
Psp6I CCWGG 2 cut(s) 1042, 1629
PspFI CCCAGC 4 cut(s) 356, 370, 634, 1382
PspGI CCWGG 2 cut(s) 1042, 1629
PspN4I GGNNCC 2 cut(s) 369, 1804
PspOMI GGGCCC 1 cut(s) 1802
PspPI GGNCC 6 cut(s) 367, 802, 928, 1376, 1802, 1803
PspPPI RGGWCCY 1 cut(s) 1376
PstI CTGCAG 1 cut(s) 1039
PstNI CAGNNNCTG 2 cut(s) 1043, 1379
PvuII CAGCTG 1 cut(s) 519
RsaI GTAC 6 cut(s) 126, 388, 511, 567, 573, 724
RsaNI GTAC 6 cut(s) 125, 387, 510, 566, 572, 723
RseI CAYNNNNRTG 1 cut(s) 1280
SapI GCTCTTC 2 cut(s) 609, 1176
SaqAI TTAA 7 cut(s) 216, 236, 543, 578, 717, 948, 1460
SatI GCNGC 5 cut(s) 6, 106, 517, 881, 1038
Sau96I GGNCC 6 cut(s) 367, 802, 928, 1376, 1802, 1803
ScaI AGTACT 1 cut(s) 126
SchI GAGTC 5 cut(s) 74, 1225, 1240, 1343, 1580
ScrFI CCNGG 3 cut(s) 1044, 1200, 1631
SduI GDGCHC 3 cut(s) 1188, 1200, 1806
SfaNI GCATC 3 cut(s) 733, 862, 1272
SfcI CTRYAG 2 cut(s) 57, 1035
SinI GGWCC 3 cut(s) 367, 928, 1376
SmiMI CAYNNNNRTG 1 cut(s) 1280
SmlI CTYRAG 2 cut(s) 120, 1131
SmoI CTYRAG 2 cut(s) 120, 1131
SseBI AGGCCT 2 cut(s) 820, 1105
SsiI CCGC 3 cut(s) 6, 106, 961
SspI AATATT 1 cut(s) 487
SspMI CTAG 5 cut(s) 351, 996, 1101, 1149, 1427
StuI AGGCCT 2 cut(s) 820, 1105
StyD4I CCNGG 3 cut(s) 1042, 1198, 1629
StyI CCWWGG 1 cut(s) 1465
TaaI ACNGT 2 cut(s) 722, 1450
TaiI ACGT 1 cut(s) 584
TaqI TCGA 4 cut(s) 285, 898, 1527, 1539
TatI WGTACW 4 cut(s) 124, 509, 565, 571
TauI GCSGC 2 cut(s) 8, 108
TfiI GAWTC 3 cut(s) 401, 436, 527
Tru1I TTAA 7 cut(s) 216, 236, 543, 578, 717, 948, 1460
Tru9I TTAA 7 cut(s) 216, 236, 543, 578, 717, 948, 1460
TscAI CASTG 2 cut(s) 269, 1596
TseFI GTSAC 1 cut(s) 1000
TseI GCWGC 3 cut(s) 516, 880, 1037
Tsp45I GTSAC 1 cut(s) 1000
TspDTI ATGAA 7 cut(s) 191, 303, 485, 540, 708, 1226, 1811
TspRI CASTG 2 cut(s) 269, 1596
VpaK11BI GGWCC 3 cut(s) 367, 928, 1376
VspI ATTAAT 1 cut(s) 543
XapI RAATTY 6 cut(s) 51, 92, 406, 707, 935, 1456
XmiI GTMKAC 1 cut(s) 972
XmnI GAANNNNTTC 1 cut(s) 1311
XspI CTAG 5 cut(s) 351, 996, 1101, 1149, 1427
ZrmI AGTACT 1 cut(s) 126
Zsp2I ATGCAT 1 cut(s) 748
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.