structural constituent of ribosome
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000032228 |
| rosa_multiflora | Rmu_sc0000012.1_g000010 Rmu_sc0000012.1_g000011 |
| rosa_roxburghii | Rroxscaffold_1G00060710 |
| rosa_rugosa | Rorug05G0029900 Rorug05G0029900 |
| rosa_samantha | Rh5AG123500 Rh5BG122400 Rh5CG133800 Rh5DG121800 |
| rosa_wichuraiana | Rw5G010660 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 328 |
| AcuI | CTGAAG | 2 cut(s) | 179, 335 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 71 |
| AgeI | ACCGGT | 1 cut(s) | 523 |
| AgsI | TTSAA | 3 cut(s) | 53, 326, 333 |
| AjnI | CCWGG | 1 cut(s) | 501 |
| AluBI | AGCT | 3 cut(s) | 145, 456, 482 |
| AluI | AGCT | 3 cut(s) | 145, 456, 482 |
| Alw21I | GWGCWC | 1 cut(s) | 60 |
| Alw26I | GTCTC | 1 cut(s) | 213 |
| AoxI | GGCC | 1 cut(s) | 674 |
| ApaI | GGGCCC | 1 cut(s) | 678 |
| ApoI | RAATTY | 1 cut(s) | 328 |
| AsiGI | ACCGGT | 1 cut(s) | 523 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 183 |
| AspS9I | GGNCC | 3 cut(s) | 248, 674, 675 |
| AsuC2I | CCSGG | 1 cut(s) | 72 |
| AvaII | GGWCC | 1 cut(s) | 248 |
| BaeGI | GKGCMC | 2 cut(s) | 72, 678 |
| BanII | GRGCYC | 1 cut(s) | 678 |
| BbsI | GAAGAC | 1 cut(s) | 323 |
| Bbv12I | GWGCWC | 1 cut(s) | 60 |
| BccI | CCATC | 1 cut(s) | 598 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 401, 435 |
| BciT130I | CCWGG | 1 cut(s) | 503 |
| BciVI | GTATCC | 1 cut(s) | 625 |
| BclI | TGATCA | 2 cut(s) | 352, 622 |
| BcnI | CCSGG | 1 cut(s) | 72 |
| BcoDI | GTCTC | 1 cut(s) | 213 |
| BfaI | CTAG | 2 cut(s) | 21, 299 |
| BfuI | GTATCC | 1 cut(s) | 625 |
| Bme1390I | CCNGG | 2 cut(s) | 72, 503 |
| Bme18I | GGWCC | 1 cut(s) | 248 |
| BmgT120I | GGNCC | 3 cut(s) | 248, 674, 675 |
| BmiI | GGNNCC | 1 cut(s) | 676 |
| BmrFI | CCNGG | 2 cut(s) | 72, 503 |
| BmsI | GCATC | 1 cut(s) | 144 |
| BpiI | GAAGAC | 1 cut(s) | 323 |
| BpmI | CTGGAG | 3 cut(s) | 248, 524, 680 |
| Bpu10I | CCTNAGC | 1 cut(s) | 244 |
| BpuMI | CCSGG | 1 cut(s) | 72 |
| Bsa29I | ATCGAT | 1 cut(s) | 399 |
| BsaJI | CCNNGG | 1 cut(s) | 337 |
| BsaWI | WCCGGW | 1 cut(s) | 523 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 197, 227 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 71 |
| Bse118I | RCCGGY | 1 cut(s) | 523 |
| Bse1I | ACTGG | 1 cut(s) | 231 |
| Bse3DI | GCAATG | 1 cut(s) | 345 |
| BseBI | CCWGG | 1 cut(s) | 503 |
| BseCI | ATCGAT | 1 cut(s) | 399 |
| BseDI | CCNNGG | 1 cut(s) | 337 |
| BseGI | GGATG | 2 cut(s) | 574, 609 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 71 |
| BseMI | GCAATG | 1 cut(s) | 345 |
| BseMII | CTCAG | 1 cut(s) | 443 |
| BseNI | ACTGG | 1 cut(s) | 231 |
| BseSI | GKGCMC | 2 cut(s) | 72, 678 |
| BseYI | CCCAGC | 1 cut(s) | 254 |
| BsgI | GTGCAG | 1 cut(s) | 441 |
| BshFI | GGCC | 1 cut(s) | 676 |
| BshTI | ACCGGT | 1 cut(s) | 523 |
| BshVI | ATCGAT | 1 cut(s) | 399 |
| BsiHKAI | GWGCWC | 1 cut(s) | 60 |
| BsiSI | CCGG | 2 cut(s) | 72, 524 |
| BslFI | GGGAC | 1 cut(s) | 130 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 71 |
| BsmAI | GTCTC | 1 cut(s) | 213 |
| BsmFI | GGGAC | 1 cut(s) | 130 |
| BsnI | GGCC | 1 cut(s) | 676 |
| Bsp120I | GGGCCC | 1 cut(s) | 674 |
| Bsp1286I | GDGCHC | 3 cut(s) | 60, 72, 678 |
| Bsp143I | GATC | 3 cut(s) | 352, 535, 622 |
| BspANI | GGCC | 1 cut(s) | 676 |
| BspCNI | CTCAG | 1 cut(s) | 444 |
| BspDI | ATCGAT | 1 cut(s) | 399 |
| BspLI | GGNNCC | 1 cut(s) | 676 |
| BspQI | GCTCTTC | 1 cut(s) | 48 |
| BsrDI | GCAATG | 1 cut(s) | 345 |
| BsrFI | RCCGGY | 1 cut(s) | 523 |
| BsrI | ACTGG | 1 cut(s) | 231 |
| BssAI | RCCGGY | 1 cut(s) | 523 |
| BssECI | CCNNGG | 1 cut(s) | 337 |
| BssMI | GATC | 3 cut(s) | 352, 535, 622 |
| BssT1I | CCWWGG | 1 cut(s) | 337 |
| Bst2UI | CCWGG | 1 cut(s) | 503 |
| Bst4CI | ACNGT | 2 cut(s) | 322, 419 |
| Bst6I | CTCTTC | 2 cut(s) | 48, 582 |
| BstC8I | GCNNGC | 2 cut(s) | 379, 548 |
| BstDEI | CTNAG | 2 cut(s) | 244, 452 |
| BstF5I | GGATG | 2 cut(s) | 574, 609 |
| BstKTI | GATC | 3 cut(s) | 355, 538, 625 |
| BstMAI | GTCTC | 1 cut(s) | 213 |
| BstMBI | GATC | 3 cut(s) | 352, 535, 622 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 55 |
| BstNI | CCWGG | 1 cut(s) | 503 |
| BstSCI | CCNGG | 2 cut(s) | 70, 501 |
| BstSLI | GKGCMC | 2 cut(s) | 72, 678 |
| BstV2I | GAAGAC | 1 cut(s) | 323 |
| Bsu15I | ATCGAT | 1 cut(s) | 399 |
| BsuI | GTATCC | 1 cut(s) | 625 |
| BsuRI | GGCC | 1 cut(s) | 676 |
| BsuTUI | ATCGAT | 1 cut(s) | 399 |
| BtsCI | GGATG | 2 cut(s) | 574, 609 |
| BtsI | GCAGTG | 1 cut(s) | 461 |
| BtsIMutI | CAGTG | 1 cut(s) | 461 |
| Cac8I | GCNNGC | 2 cut(s) | 379, 548 |
| Cfr10I | RCCGGY | 1 cut(s) | 523 |
| Cfr13I | GGNCC | 3 cut(s) | 248, 674, 675 |
| ClaI | ATCGAT | 1 cut(s) | 399 |
| CspAI | ACCGGT | 1 cut(s) | 523 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 450, 485 |
| CviAII | CATG | 3 cut(s) | 382, 551, 705 |
| CviJI | RGCY | 7 cut(s) | 64, 145, 297, 456, 482, 501, 676 |
| CviKI_1 | RGCY | 7 cut(s) | 64, 145, 297, 456, 482, 501, 676 |
| DdeI | CTNAG | 2 cut(s) | 244, 452 |
| DpnI | GATC | 3 cut(s) | 354, 537, 624 |
| DpnII | GATC | 3 cut(s) | 352, 535, 622 |
| Eam1104I | CTCTTC | 2 cut(s) | 48, 582 |
| EarI | CTCTTC | 2 cut(s) | 48, 582 |
| Eco130I | CCWWGG | 1 cut(s) | 337 |
| Eco24I | GRGCYC | 1 cut(s) | 678 |
| Eco47I | GGWCC | 1 cut(s) | 248 |
| Eco57I | CTGAAG | 2 cut(s) | 179, 335 |
| EcoO109I | RGGNCCY | 2 cut(s) | 248, 674 |
| EcoRII | CCWGG | 1 cut(s) | 501 |
| EcoT14I | CCWWGG | 1 cut(s) | 337 |
| EcoT38I | GRGCYC | 1 cut(s) | 678 |
| ErhI | CCWWGG | 1 cut(s) | 337 |
| FaeI | CATG | 3 cut(s) | 385, 554, 708 |
| FaqI | GGGAC | 1 cut(s) | 130 |
| FatI | CATG | 3 cut(s) | 381, 550, 704 |
| FbaI | TGATCA | 2 cut(s) | 352, 622 |
| FokI | GGATG | 2 cut(s) | 581, 616 |
| FriOI | GRGCYC | 1 cut(s) | 678 |
| FspBI | CTAG | 2 cut(s) | 21, 299 |
| GsaI | CCCAGC | 1 cut(s) | 258 |
| GsuI | CTGGAG | 3 cut(s) | 248, 524, 680 |
| HaeIII | GGCC | 1 cut(s) | 676 |
| HapII | CCGG | 2 cut(s) | 72, 524 |
| Hin1II | CATG | 3 cut(s) | 385, 554, 708 |
| HinfI | GANTC | 4 cut(s) | 88, 118, 206, 443 |
| HpaII | CCGG | 2 cut(s) | 72, 524 |
| Hpy166II | GTNNAC | 2 cut(s) | 237, 271 |
| Hpy188I | TCNGA | 4 cut(s) | 166, 453, 540, 627 |
| Hpy188III | TCNNGA | 3 cut(s) | 196, 410, 659 |
| Hpy8I | GTNNAC | 2 cut(s) | 237, 271 |
| HpyAV | CCTTC | 3 cut(s) | 161, 593, 622 |
| HpyCH4III | ACNGT | 2 cut(s) | 322, 419 |
| HpyCH4V | TGCA | 6 cut(s) | 4, 104, 377, 422, 434, 550 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 55 |
| HpyF3I | CTNAG | 2 cut(s) | 244, 452 |
| Hsp92II | CATG | 3 cut(s) | 385, 554, 708 |
| Ksp22I | TGATCA | 2 cut(s) | 352, 622 |
| Kzo9I | GATC | 3 cut(s) | 352, 535, 622 |
| LguI | GCTCTTC | 1 cut(s) | 48 |
| LmnI | GCTCC | 1 cut(s) | 694 |
| LweI | GCATC | 1 cut(s) | 144 |
| MaeI | CTAG | 2 cut(s) | 21, 299 |
| MaeIII | GTNAC | 1 cut(s) | 361 |
| MalI | GATC | 3 cut(s) | 354, 537, 624 |
| MboI | GATC | 3 cut(s) | 352, 535, 622 |
| MboII | GAAGA | 3 cut(s) | 65, 328, 599 |
| MfeI | CAATTG | 1 cut(s) | 44 |
| MhlI | GDGCHC | 3 cut(s) | 60, 72, 678 |
| MluCI | AATT | 6 cut(s) | 44, 80, 282, 328, 367, 611 |
| MlyI | GAGTC | 4 cut(s) | 97, 112, 215, 452 |
| MnlI | CCTC | 4 cut(s) | 553, 583, 601, 642 |
| MroXI | GAANNNNTTC | 1 cut(s) | 183 |
| MslI | CAYNNNNRTG | 1 cut(s) | 152 |
| MspI | CCGG | 2 cut(s) | 72, 524 |
| MspR9I | CCNGG | 2 cut(s) | 72, 503 |
| MunI | CAATTG | 1 cut(s) | 44 |
| MvaI | CCWGG | 1 cut(s) | 503 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 55 |
| NciI | CCSGG | 1 cut(s) | 72 |
| NdeII | GATC | 3 cut(s) | 352, 535, 622 |
| NlaIII | CATG | 3 cut(s) | 385, 554, 708 |
| NlaIV | GGNNCC | 1 cut(s) | 676 |
| PciSI | GCTCTTC | 1 cut(s) | 48 |
| PdmI | GAANNNNTTC | 1 cut(s) | 183 |
| PinAI | ACCGGT | 1 cut(s) | 523 |
| PleI | GAGTC | 4 cut(s) | 96, 112, 214, 451 |
| PpsI | GAGTC | 4 cut(s) | 96, 112, 214, 451 |
| PpuMI | RGGWCCY | 1 cut(s) | 248 |
| Psp5II | RGGWCCY | 1 cut(s) | 248 |
| Psp6I | CCWGG | 1 cut(s) | 501 |
| PspFI | CCCAGC | 1 cut(s) | 254 |
| PspGI | CCWGG | 1 cut(s) | 501 |
| PspN4I | GGNNCC | 1 cut(s) | 676 |
| PspOMI | GGGCCC | 1 cut(s) | 674 |
| PspPI | GGNCC | 3 cut(s) | 248, 674, 675 |
| PspPPI | RGGWCCY | 1 cut(s) | 248 |
| RseI | CAYNNNNRTG | 1 cut(s) | 152 |
| SapI | GCTCTTC | 1 cut(s) | 48 |
| Sau3AI | GATC | 3 cut(s) | 352, 535, 622 |
| Sau96I | GGNCC | 3 cut(s) | 248, 674, 675 |
| SchI | GAGTC | 4 cut(s) | 97, 112, 215, 452 |
| ScrFI | CCNGG | 2 cut(s) | 72, 503 |
| SduI | GDGCHC | 3 cut(s) | 60, 72, 678 |
| SetI | ASST | 5 cut(s) | 147, 250, 458, 484, 594 |
| SfaNI | GCATC | 1 cut(s) | 144 |
| SinI | GGWCC | 1 cut(s) | 248 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 152 |
| Sse9I | AATT | 6 cut(s) | 44, 80, 282, 328, 367, 611 |
| SspMI | CTAG | 2 cut(s) | 21, 299 |
| StyD4I | CCNGG | 2 cut(s) | 70, 501 |
| StyI | CCWWGG | 1 cut(s) | 337 |
| TaaI | ACNGT | 2 cut(s) | 322, 419 |
| TaqI | TCGA | 2 cut(s) | 399, 411 |
| TasI | AATT | 6 cut(s) | 44, 80, 282, 328, 367, 611 |
| TscAI | CASTG | 1 cut(s) | 468 |
| TspDTI | ATGAA | 2 cut(s) | 98, 683 |
| TspRI | CASTG | 1 cut(s) | 468 |
| VpaK11BI | GGWCC | 1 cut(s) | 248 |
| XapI | RAATTY | 1 cut(s) | 328 |
| XmnI | GAANNNNTTC | 1 cut(s) | 183 |
| XspI | CTAG | 2 cut(s) | 21, 299 |