No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom10g28390 |
| rosa_multiflora | Rmu_sc0000060.1_g000053 Rmu_sc0001706.1_g000037 |
| rosa_roxburghii | Rroxscaffold_1G00075220 |
| rosa_samantha | Rh1AG032700 Rh1CG031100 Rh1DG038400 Rh1DG095500 Rh6BG326800 Rh6CG415600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 200 |
| AclWI | GGATC | 1 cut(s) | 139 |
| AcsI | RAATTY | 1 cut(s) | 143 |
| AfaI | GTAC | 2 cut(s) | 289, 307 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 256, 307 |
| AjnI | CCWGG | 1 cut(s) | 147 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 129, 161 |
| AluBI | AGCT | 3 cut(s) | 44, 94, 127 |
| AluI | AGCT | 3 cut(s) | 44, 94, 127 |
| Alw26I | GTCTC | 1 cut(s) | 265 |
| AlwI | GGATC | 1 cut(s) | 139 |
| ApeKI | GCWGC | 1 cut(s) | 124 |
| ApoI | RAATTY | 1 cut(s) | 143 |
| AspLEI | GCGC | 1 cut(s) | 226 |
| AsuHPI | GGTGA | 1 cut(s) | 389 |
| AsuNHI | GCTAGC | 1 cut(s) | 44 |
| BbvI | GCAGC | 1 cut(s) | 136 |
| BciT130I | CCWGG | 1 cut(s) | 149 |
| BcoDI | GTCTC | 1 cut(s) | 265 |
| BfaI | CTAG | 1 cut(s) | 45 |
| BfmI | CTRYAG | 2 cut(s) | 153, 354 |
| BfoI | RGCGCY | 1 cut(s) | 227 |
| BisI | GCNGC | 1 cut(s) | 125 |
| BlsI | GCNGC | 1 cut(s) | 126 |
| Bme1390I | CCNGG | 1 cut(s) | 149 |
| BmrFI | CCNGG | 1 cut(s) | 149 |
| BmsI | GCATC | 1 cut(s) | 34 |
| BmtI | GCTAGC | 1 cut(s) | 48 |
| BoxI | GACNNNNGTC | 1 cut(s) | 257 |
| BsaI | GGTCTC | 1 cut(s) | 265 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 256, 307 |
| BseBI | CCWGG | 1 cut(s) | 149 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 256, 307 |
| BseXI | GCAGC | 1 cut(s) | 136 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 256, 307 |
| BsmAI | GTCTC | 1 cut(s) | 265 |
| Bso31I | GGTCTC | 1 cut(s) | 265 |
| Bsp143I | GATC | 2 cut(s) | 131, 379 |
| BspOI | GCTAGC | 1 cut(s) | 48 |
| BspPI | GGATC | 1 cut(s) | 139 |
| BspTNI | GGTCTC | 1 cut(s) | 265 |
| BssMI | GATC | 2 cut(s) | 131, 379 |
| Bst2UI | CCWGG | 1 cut(s) | 149 |
| Bst4CI | ACNGT | 1 cut(s) | 310 |
| BstC8I | GCNNGC | 3 cut(s) | 46, 65, 222 |
| BstH2I | RGCGCY | 1 cut(s) | 227 |
| BstHHI | GCGC | 1 cut(s) | 226 |
| BstKTI | GATC | 2 cut(s) | 134, 382 |
| BstMAI | GTCTC | 1 cut(s) | 265 |
| BstMBI | GATC | 2 cut(s) | 131, 379 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 10, 91 |
| BstNI | CCWGG | 1 cut(s) | 149 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 257 |
| BstSCI | CCNGG | 1 cut(s) | 147 |
| BstSFI | CTRYAG | 2 cut(s) | 153, 354 |
| BstV1I | GCAGC | 1 cut(s) | 136 |
| BstX2I | RGATCY | 1 cut(s) | 131 |
| BstYI | RGATCY | 1 cut(s) | 131 |
| Cac8I | GCNNGC | 3 cut(s) | 46, 65, 222 |
| CfoI | GCGC | 1 cut(s) | 226 |
| Csp6I | GTAC | 2 cut(s) | 288, 306 |
| CviJI | RGCY | 6 cut(s) | 44, 67, 94, 127, 152, 220 |
| CviKI_1 | RGCY | 6 cut(s) | 44, 67, 94, 127, 152, 220 |
| CviQI | GTAC | 2 cut(s) | 288, 306 |
| DpnI | GATC | 2 cut(s) | 133, 381 |
| DpnII | GATC | 2 cut(s) | 131, 379 |
| Eco31I | GGTCTC | 1 cut(s) | 265 |
| Eco32I | GATATC | 1 cut(s) | 234 |
| EcoRII | CCWGG | 1 cut(s) | 147 |
| EcoRV | GATATC | 1 cut(s) | 234 |
| FaiI | YATR | 8 cut(s) | 75, 103, 183, 200, 244, 318, 344, 362 |
| Fnu4HI | GCNGC | 1 cut(s) | 125 |
| Fsp4HI | GCNGC | 1 cut(s) | 125 |
| FspBI | CTAG | 1 cut(s) | 45 |
| GlaI | GCGC | 1 cut(s) | 225 |
| GluI | GCNGC | 1 cut(s) | 125 |
| HaeII | RGCGCY | 1 cut(s) | 227 |
| HhaI | GCGC | 1 cut(s) | 226 |
| Hin6I | GCGC | 1 cut(s) | 224 |
| HinP1I | GCGC | 1 cut(s) | 224 |
| HindIII | AAGCTT | 1 cut(s) | 92 |
| HinfI | GANTC | 2 cut(s) | 6, 35 |
| HphI | GGTGA | 1 cut(s) | 389 |
| Hpy166II | GTNNAC | 1 cut(s) | 337 |
| Hpy188I | TCNGA | 2 cut(s) | 34, 136 |
| Hpy8I | GTNNAC | 1 cut(s) | 337 |
| HpyAV | CCTTC | 1 cut(s) | 78 |
| HpyCH4III | ACNGT | 1 cut(s) | 310 |
| HpyCH4V | TGCA | 1 cut(s) | 278 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 10, 91 |
| HspAI | GCGC | 1 cut(s) | 224 |
| Kzo9I | GATC | 2 cut(s) | 131, 379 |
| LpnPI | CCDG | 7 cut(s) | 106, 134, 161, 234, 263, 314, 378 |
| Lsp1109I | GCAGC | 1 cut(s) | 136 |
| LweI | GCATC | 1 cut(s) | 34 |
| MaeI | CTAG | 1 cut(s) | 45 |
| MaeIII | GTNAC | 2 cut(s) | 187, 293 |
| MalI | GATC | 2 cut(s) | 133, 381 |
| MboI | GATC | 2 cut(s) | 131, 379 |
| MboII | GAAGA | 2 cut(s) | 374, 380 |
| MflI | RGATCY | 1 cut(s) | 131 |
| MluCI | AATT | 3 cut(s) | 18, 143, 273 |
| MlyI | GAGTC | 1 cut(s) | 29 |
| MseI | TTAA | 4 cut(s) | 21, 108, 215, 350 |
| MslI | CAYNNNNRTG | 1 cut(s) | 332 |
| MspR9I | CCNGG | 1 cut(s) | 149 |
| MvaI | CCWGG | 1 cut(s) | 149 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 10, 91 |
| NdeII | GATC | 2 cut(s) | 131, 379 |
| NheI | GCTAGC | 1 cut(s) | 44 |
| NmuCI | GTSAC | 1 cut(s) | 187 |
| PfeI | GAWTC | 1 cut(s) | 6 |
| PkrI | GCNGC | 1 cut(s) | 126 |
| PleI | GAGTC | 1 cut(s) | 29 |
| PpsI | GAGTC | 1 cut(s) | 29 |
| PshAI | GACNNNNGTC | 1 cut(s) | 257 |
| PsiI | TTATAA | 1 cut(s) | 200 |
| Psp6I | CCWGG | 1 cut(s) | 147 |
| PspGI | CCWGG | 1 cut(s) | 147 |
| PsuI | RGATCY | 1 cut(s) | 131 |
| RsaI | GTAC | 2 cut(s) | 289, 307 |
| RsaNI | GTAC | 2 cut(s) | 288, 306 |
| RseI | CAYNNNNRTG | 1 cut(s) | 332 |
| SaqAI | TTAA | 4 cut(s) | 21, 108, 215, 350 |
| SatI | GCNGC | 1 cut(s) | 125 |
| Sau3AI | GATC | 2 cut(s) | 131, 379 |
| SchI | GAGTC | 1 cut(s) | 29 |
| ScrFI | CCNGG | 1 cut(s) | 149 |
| SetI | ASST | 4 cut(s) | 46, 96, 108, 129 |
| SfaNI | GCATC | 1 cut(s) | 34 |
| SfcI | CTRYAG | 2 cut(s) | 153, 354 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 332 |
| Sse9I | AATT | 3 cut(s) | 18, 143, 273 |
| SspMI | CTAG | 1 cut(s) | 45 |
| StyD4I | CCNGG | 1 cut(s) | 147 |
| TaaI | ACNGT | 1 cut(s) | 310 |
| TasI | AATT | 3 cut(s) | 18, 143, 273 |
| TatI | WGTACW | 1 cut(s) | 287 |
| TfiI | GAWTC | 1 cut(s) | 6 |
| Tru1I | TTAA | 4 cut(s) | 21, 108, 215, 350 |
| Tru9I | TTAA | 4 cut(s) | 21, 108, 215, 350 |
| TseFI | GTSAC | 1 cut(s) | 187 |
| TseI | GCWGC | 1 cut(s) | 124 |
| Tsp45I | GTSAC | 1 cut(s) | 187 |
| TspDTI | ATGAA | 1 cut(s) | 189 |
| TspGWI | ACGGA | 3 cut(s) | 285, 322, 375 |
| XapI | RAATTY | 1 cut(s) | 143 |
| XspI | CTAG | 1 cut(s) | 45 |