Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000197.1

Orthogroup ID

OG0006469

Physical Location & Seq

Genomic Coordinates Reverse (-)

44296 .. 50437

Gene Structure 6142 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2544 bp

atgaagattccagaggttgttggtagggacatatcaacaatttgggagacatttcttgttgttctggtcatctacactgcttgggtctcccccttcgaatttggctttcttaacaaaccacagggaccactctccattattgacaatattgtcaatggcttctttgctatagatattgttcttacattctttgtggcttacctggataaggctacatatctacttgttgacgatcaaaagaagattgcttggaagtacgcaagtacgtggttgatctttgatgtcatatccacaattcctactgaacttgctaggaagatttcccctaaacctttccggtcatatggctttttcaacatgctccgtctttggcgtcttagaagagttagtgctttattttccagattggagaaagataggaactataattacttttgggttcgttgtgcaaaacttatttgtgtcaccctgtttgcggttcactgtgctggatgcttctattaccttcttgcagcccgttaccgtgaccccaagaacacatggattggaaaaacaatggaagattttcttcatcaaagtctctggattcgatatgtgacttcagtttattggtctatcactacactcacaaccgttggctacggagatttgcatcctgtcaatacaagggagatgatctttgacatattctacatgcttttcaaccttggcttgacatcatacttgattggaaatatgaccaacttggttgtccatgggaccagtcgaacacgaaaatttagggataccatacaagctgcctccagttttgcacaaaggaaccaactgcctgttcgcctgcaggatcagatgcttgcccacttgtgtctgaagttcaggacagatgcagagggactccagcaacaagagactcttgattcacttccgaaagccatacgctcaagtatttcacattatctgttttactctcttgtcgataaggtgtacttgtttcatggggtttcaaatgacttgctttttcagttggtctcagagatgaaagctgagtattttcctcccaaagaagatgtaatattgcagaatgaagcacctacagatttctacatacttgtcactggtgctgcggatttagtggtcctcaagaatggagttgaacaggtcattggtgaggcaaaaactggtgatcttattggtgaaattggggtactctgttataggccacagctttttaccgttaggaccaaaagattgagtcagctactccggctgaaccgaactacattcttaagcatagttcaagctaatgttggggatggaactataataatgaataacctcctccagcatttgaaagaggtcaaggatccatatatggagggagttttgctggagactgagaacatgctagcacgtggtagactggatctacctctcagtctatgctttgcagcaattagaggagatgacttgctgttgcatcagttgttgagacggggtttggatccgaatgaatcagacaataatggcagaacagctctgcatatagctgcatcccaaggaagtgagaactgtgtgcttctactattggactatggagcacttcctaacagtagagactcggagggaagtgtaccactttgggaggcaatacagaaggatcatgaatcgattgccaaactgctgatggacaacggtgcaactttgaatgctggggatgttggtcactttgcttgcactgctgctgagcaaaacaggttggacttgctcaatgaaatagttcaacatggaggagatgtcacagctcctagaagcaatggaaccacagctctccatgtcgcagtgtccgaagacaacattgaaattgtgaaattccttttggacaaaggggcagatattgacaaaccagacctccatggctggaccgcgagagctctagccgaccaacaaggacatgaagagataaagaacctttttcaatctagaaaagagcccaaagctcaatctgttatcaccattcctactgtgcaaaagcctggaattcgcttccttgggagatttacaagcgagccaaacatccatcctccttcccaggaaggctcatttctagtagcagatgggggatcatggggtcgaagccgcccaaggcgtaggactaacaacttccacaactcactttttgggatgatgtcagctgcacacacaggggagaaggatttgttcttctcctcaattagggagaccgtcgaaaccactcctaagagtattgggagtaatcctaaccctgctagagtgacaattagttgccctgaaaatagtgaagtttcagggaaacttgtattacttcctgccagttttgaggagttactcgaggttggtgctaagaaattcggtttcactccggctaaagttctgagcaaagatggaggagctgaaattgacgatatagaggtgattagagacggtgatcatcttatttttgtcagtggccaagatgaacctcaagaatgtactagcgaagatactccgactaaaaaagatgtgtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0005215 GO:0005216 GO:0005242 GO:0005244 GO:0005249 GO:0005261 GO:0005267 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0008324 GO:0009414 GO:0009415 GO:0009628 GO:0009651 GO:0009653 GO:0009888 GO:0009987 GO:0010015 GO:0010035 GO:0010053 GO:0010054 GO:0010107 GO:0010119 GO:0015075 GO:0015077 GO:0015079 GO:0015267 GO:0015276 GO:0015318 GO:0015672 GO:0016020 GO:0016021 GO:0016049 GO:0021700 GO:0022622 GO:0022803 GO:0022832 GO:0022834 GO:0022836 GO:0022838 GO:0022839 GO:0022843 GO:0022857 GO:0022890 GO:0030001 GO:0030154 GO:0031224 GO:0031226 GO:0032501 GO:0032502 GO:0034220 GO:0040007 GO:0042221 GO:0042391 GO:0042802 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0048364 GO:0048468 GO:0048469 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0060560 GO:0065007 GO:0065008 GO:0071695 GO:0071804 GO:0071805 GO:0071944 GO:0080147 GO:0090333 GO:0090558 GO:0090627 GO:0098655 GO:0098660 GO:0098662 GO:0099094 GO:0099402 GO:1901700 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ank_2 Ank_4 Ion_trans KHA cNMP_binding

Protein Analysis

847

Amino Acids

95.15

Weight (kDa)

6.03

Isoelectric Point (pI)

37.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ion_trans	PF00520	13 - 257	5.7e-44	Ion transport protein
Ion_trans_2	PF07885	160 - 250	3.5e-13	Ion channel
cNMP_binding	PF00027	350 - 435	2.4e-14	Cyclic nucleotide-binding domain
Ank_2	PF12796	480 - 571	4.8e-17	Ankyrin repeats (3 copies)
Ank_4	PF13637	480 - 529	6.8e-09	Ankyrin repeats (many copies)
Ank_5	PF13857	495 - 546	3.4e-08	Ankyrin repeats (many copies)
Ank	PF00023	508 - 539	3.9e-07	Ankyrin repeat
Ank_2	PF12796	579 - 657	1.4e-11	Ankyrin repeats (3 copies)
Ank_4	PF13637	579 - 626	1.1e-07	Ankyrin repeats (many copies)
Ank_5	PF13857	593 - 646	9.1e-08	Ankyrin repeats (many copies)
Ank	PF00023	605 - 636	3.6e-08	Ankyrin repeat
KHA	PF11834	763 - 826	6.2e-24	KHA, dimerisation domain of potassium ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0006469)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G26650 AT2G26650
fragaria_vesca	FvH4_1g03960 FvH4_1g03960 FvH4_1g03960 FvH4_1g03960 FvH4_1g03960 FvH4_3g32370
malus_domestica	MD02G1037900.v1.1 MD15G1178200.v1.1
prunus_persica	Prupe.7G237400_v2.0.a1 Prupe.7G237400_v2.0.a1 Prupe.7G237400_v2.0.a1
pyrus_communis	pycom15g15990
rosa_chinensis	RchiOBHm_Chr2g0089421
rosa_laevigata	RLG00000016026
rosa_multiflora	Rmu_sc0000197.1_g000013
rosa_roxburghii	Rroxscaffold_2G00151950
rosa_rugosa	Rorug02G0000500 Rorug02G0000600 Rorug02G0000700
rosa_samantha	Rh2AG045800 Rh2BG044300 Rh2CG046200 Rh2DG045700
rosa_wichuraiana	Rw2G003680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	149
AccI	GTMKAC	1 cut(s)	1417
AccII	CGCG	1 cut(s)	1925
AciI	CCGC	4 cut(s)	476, 1124, 1923, 2137
AclWI	GGATC	8 cut(s)	852, 1358, 1371, 1431, 1496, 1509, 1665, 2128
AcoI	YGGCCR	1 cut(s)	2485
AcsI	RAATTY	5 cut(s)	98, 776, 1868, 2037, 2384
AcuI	CTGAAG	2 cut(s)	585, 890
AcvI	CACGTG	1 cut(s)	1412
AcyI	GRCGYC	1 cut(s)	373
AfaI	GTAC	6 cut(s)	257, 265, 986, 1206, 1632, 2509
AfiI	CCNNNNNNNGG	3 cut(s)	208, 475, 2232
AflII	CTTAAG	1 cut(s)	1285
AjnI	CCWGG	3 cut(s)	201, 2032, 2088
AjuI	GAANNNNNNNTTGG	6 cut(s)	816, 848, 1146, 1178, 1859, 1891
Alw21I	GWGCWC	2 cut(s)	1600, 1933
AlwI	GGATC	8 cut(s)	852, 1358, 1371, 1431, 1496, 1509, 1665, 2128
Ama87I	CYCGRG	1 cut(s)	2366
AoxI	GGCC	2 cut(s)	1217, 2485
ApeKI	GCWGC	7 cut(s)	512, 797, 1121, 1448, 1547, 1739, 2192
ApoI	RAATTY	5 cut(s)	98, 776, 1868, 2037, 2384
Asp700I	GAANNNNTTC	2 cut(s)	564, 1776
AspS9I	GGNCC	5 cut(s)	125, 759, 1135, 1239, 1920
AsuHPI	GGTGA	7 cut(s)	457, 1178, 1193, 1205, 2002, 2461, 2474
AsuII	TTCGAA	1 cut(s)	96
AsuNHI	GCTAGC	1 cut(s)	1405
AvaI	CYCGRG	1 cut(s)	2366
AvaII	GGWCC	5 cut(s)	125, 759, 1135, 1239, 1920
BalI	TGGCCA	1 cut(s)	2487
BamHI	GGATCC	2 cut(s)	1363, 1501
BanII	GRGCYC	2 cut(s)	1933, 1992
BbrPI	CACGTG	1 cut(s)	1412
BbsI	GAAGAC	1 cut(s)	1854
Bbv12I	GWGCWC	2 cut(s)	1600, 1933
BbvI	GCAGC	7 cut(s)	524, 784, 1108, 1460, 1534, 1726, 2179
BccI	CCATC	5 cut(s)	1307, 1678, 2085, 2108, 2414
BcgI	CGANNNNNNTGC	2 cut(s)	2357, 2391
BciT130I	CCWGG	3 cut(s)	203, 2034, 2090
BciVI	GTATCC	1 cut(s)	778
BclI	TGATCA	1 cut(s)	2464
BfaI	CTAG	8 cut(s)	312, 1406, 1806, 1934, 1980, 2105, 2286, 2511
BfmI	CTRYAG	3 cut(s)	168, 839, 1092
BfrI	CTTAAG	1 cut(s)	1285
BfuI	GTATCC	1 cut(s)	778
BisI	GCNGC	8 cut(s)	513, 798, 1122, 1449, 1548, 1740, 2137, 2193
BlpI	GCTNAGC	1 cut(s)	1743
BlsI	GCNGC	8 cut(s)	514, 799, 1123, 1450, 1549, 1741, 2138, 2194
Bme1390I	CCNGG	3 cut(s)	203, 2034, 2090
Bme18I	GGWCC	5 cut(s)	125, 759, 1135, 1239, 1920
BmeT110I	CYCGRG	1 cut(s)	2366
BmgT120I	GGNCC	5 cut(s)	125, 759, 1135, 1239, 1920
BmiI	GGNNCC	6 cut(s)	126, 760, 821, 1365, 1503, 1819
BmrFI	CCNGG	3 cut(s)	203, 2034, 2090
BmsI	GCATC	6 cut(s)	482, 661, 840, 874, 1486, 1559
BmtI	GCTAGC	1 cut(s)	1409
BpiI	GAAGAC	1 cut(s)	1854
BpmI	CTGGAG	4 cut(s)	787, 881, 1325, 1409
Bpu1102I	GCTNAGC	1 cut(s)	1743
Bpu14I	TTCGAA	1 cut(s)	96
BpuEI	CTTGAG	3 cut(s)	925, 1124, 2484
Bsa29I	ATCGAT	1 cut(s)	1667
BsaAI	YACGTR	2 cut(s)	267, 1412
BsaBI	GATNNNNATC	1 cut(s)	651
BsaHI	GRCGYC	1 cut(s)	373
BsaI	GGTCTC	3 cut(s)	91, 1033, 2231
BsaJI	CCNNGG	7 cut(s)	706, 754, 1555, 1912, 2047, 2088, 2141
BsaWI	WCCGGW	1 cut(s)	336
BsaXI	ACNNNNNCTCC	4 cut(s)	1779, 1809, 1893, 1923
Bsc4I	CCNNNNNNNGG	3 cut(s)	208, 475, 2232
Bse1I	ACTGG	6 cut(s)	762, 804, 1120, 1183, 1425, 2349
Bse3DI	GCAATG	1 cut(s)	1819
Bse8I	GATNNNNATC	1 cut(s)	651
BseBI	CCWGG	3 cut(s)	203, 2034, 2090
BseCI	ATCGAT	1 cut(s)	1667
BseDI	CCNNGG	7 cut(s)	706, 754, 1555, 1912, 2047, 2088, 2141
BseGI	GGATG	8 cut(s)	497, 652, 1318, 1550, 1720, 2073, 2077, 2187
BseJI	GATNNNNATC	1 cut(s)	651
BseLI	CCNNNNNNNGG	3 cut(s)	208, 475, 2232
BseMI	GCAATG	1 cut(s)	1819
BseMII	CTCAG	6 cut(s)	1035, 1044, 1386, 1447, 1734, 2402
BseNI	ACTGG	6 cut(s)	762, 804, 1120, 1183, 1425, 2349
BseRI	GAGGAG	6 cut(s)	1328, 1473, 1803, 2215, 2372, 2439
BseXI	GCAGC	7 cut(s)	524, 784, 1108, 1460, 1534, 1726, 2179
BseYI	CCCAGC	1 cut(s)	1709
BsgI	GTGCAG	1 cut(s)	2178
Bsh1236I	CGCG	1 cut(s)	1925
BshFI	GGCC	2 cut(s)	1219, 2487
BshVI	ATCGAT	1 cut(s)	1667
BsiHKAI	GWGCWC	2 cut(s)	1600, 1933
BsiHKCI	CYCGRG	1 cut(s)	2366
BsiSI	CCGG	3 cut(s)	337, 1264, 2399
BslFI	GGGAC	4 cut(s)	41, 138, 772, 906
BslI	CCNNNNNNNGG	3 cut(s)	208, 475, 2232
BsmBI	CGTCTC	2 cut(s)	1483, 2451
BsmFI	GGGAC	4 cut(s)	41, 138, 772, 906
BsmI	GAATGC	1 cut(s)	1711
BsnI	GGCC	2 cut(s)	1219, 2487
Bso31I	GGTCTC	3 cut(s)	91, 1033, 2231
BsoBI	CYCGRG	1 cut(s)	2366
Bsp119I	TTCGAA	1 cut(s)	96
Bsp1286I	GDGCHC	3 cut(s)	1600, 1933, 1992
Bsp1720I	GCTNAGC	1 cut(s)	1743
Bsp19I	CCATGG	2 cut(s)	754, 1912
BspACI	CCGC	4 cut(s)	476, 1124, 1923, 2137
BspANI	GGCC	2 cut(s)	1219, 2487
BspCNI	CTCAG	6 cut(s)	1036, 1043, 1387, 1446, 1735, 2403
BspDI	ATCGAT	1 cut(s)	1667
BspFNI	CGCG	1 cut(s)	1925
BspHI	TCATGA	1 cut(s)	1660
BspLI	GGNNCC	6 cut(s)	126, 760, 821, 1365, 1503, 1819
BspMAI	CTGCAG	1 cut(s)	843
BspOI	GCTAGC	1 cut(s)	1409
BspPI	GGATC	8 cut(s)	852, 1358, 1371, 1431, 1496, 1509, 1665, 2128
BspT104I	TTCGAA	1 cut(s)	96
BspTI	CTTAAG	1 cut(s)	1285
BspTNI	GGTCTC	3 cut(s)	91, 1033, 2231
BsrDI	GCAATG	1 cut(s)	1819
BsrI	ACTGG	6 cut(s)	762, 804, 1120, 1183, 1425, 2349
BssECI	CCNNGG	7 cut(s)	706, 754, 1555, 1912, 2047, 2088, 2141
BssNI	GRCGYC	1 cut(s)	373
BssT1I	CCWWGG	6 cut(s)	706, 754, 1555, 1912, 2047, 2141
Bst2UI	CCWGG	3 cut(s)	203, 2034, 2090
Bst6I	CTCTTC	2 cut(s)	376, 1950
BstACI	GRCGYC	1 cut(s)	373
BstAFI	CTTAAG	1 cut(s)	1285
BstBAI	YACGTR	2 cut(s)	267, 1412
BstBI	TTCGAA	1 cut(s)	96
BstC8I	GCNNGC	5 cut(s)	839, 855, 1407, 1732, 2066
BstDEI	CTNAG	9 cut(s)	377, 1030, 1044, 1395, 1433, 1743, 2256, 2379, 2411
BstDSI	CCRYGG	2 cut(s)	754, 1912
BstENI	CCTNNNNNAGG	2 cut(s)	206, 2230
BstF5I	GGATG	8 cut(s)	497, 652, 1318, 1550, 1720, 2073, 2077, 2187
BstFNI	CGCG	1 cut(s)	1925
BstMWI	GCNNNNNNNGC	2 cut(s)	1264, 1736
BstNI	CCWGG	3 cut(s)	203, 2034, 2090
BstNSI	RCATGY	3 cut(s)	361, 697, 1405
BstSCI	CCNGG	3 cut(s)	201, 2032, 2088
BstSFI	CTRYAG	3 cut(s)	168, 839, 1092
BstUI	CGCG	1 cut(s)	1925
BstV1I	GCAGC	7 cut(s)	524, 784, 1108, 1460, 1534, 1726, 2179
BstV2I	GAAGAC	1 cut(s)	1854
BstX2I	RGATCY	3 cut(s)	1363, 1423, 1501
BstYI	RGATCY	3 cut(s)	1363, 1423, 1501
Bsu15I	ATCGAT	1 cut(s)	1667
BsuI	GTATCC	1 cut(s)	778
BsuRI	GGCC	2 cut(s)	1219, 2487
BsuTUI	ATCGAT	1 cut(s)	1667
BtgI	CCRYGG	2 cut(s)	754, 1912
BtsCI	GGATG	8 cut(s)	497, 652, 1318, 1550, 1720, 2073, 2077, 2187
BtsI	GCAGTG	3 cut(s)	75, 1734, 1845
BtsIMutI	CAGTG	6 cut(s)	75, 481, 1113, 1734, 1845, 2488
Cac8I	GCNNGC	5 cut(s)	839, 855, 1407, 1732, 2066
CciI	TCATGA	1 cut(s)	1660
Cfr13I	GGNCC	5 cut(s)	125, 759, 1135, 1239, 1920
ClaI	ATCGAT	1 cut(s)	1667
CseI	GACGC	1 cut(s)	362
Csp6I	GTAC	6 cut(s)	256, 264, 985, 1205, 1631, 2508
CviQI	GTAC	6 cut(s)	256, 264, 985, 1205, 1631, 2508
DdeI	CTNAG	9 cut(s)	377, 1030, 1044, 1395, 1433, 1743, 2256, 2379, 2411
DrdI	GACNNNNNNGTC	1 cut(s)	149
DseDI	GACNNNNNNGTC	1 cut(s)	149
EaeI	YGGCCR	1 cut(s)	2485
Eam1104I	CTCTTC	2 cut(s)	376, 1950
EarI	CTCTTC	2 cut(s)	376, 1950
Ecl136II	GAGCTC	1 cut(s)	1931
Eco130I	CCWWGG	6 cut(s)	706, 754, 1555, 1912, 2047, 2141
Eco24I	GRGCYC	2 cut(s)	1933, 1992
Eco31I	GGTCTC	3 cut(s)	91, 1033, 2231
Eco47I	GGWCC	5 cut(s)	125, 759, 1135, 1239, 1920
Eco53kI	GAGCTC	1 cut(s)	1931
Eco57I	CTGAAG	2 cut(s)	585, 890
Eco72I	CACGTG	1 cut(s)	1412
Eco88I	CYCGRG	1 cut(s)	2366
EcoICRI	GAGCTC	1 cut(s)	1931
EcoNI	CCTNNNNNAGG	2 cut(s)	206, 2230
EcoRI	GAATTC	1 cut(s)	2037
EcoRII	CCWGG	3 cut(s)	201, 2032, 2088
EcoT14I	CCWWGG	6 cut(s)	706, 754, 1555, 1912, 2047, 2141
EcoT38I	GRGCYC	2 cut(s)	1933, 1992
ErhI	CCWWGG	6 cut(s)	706, 754, 1555, 1912, 2047, 2141
Esp3I	CGTCTC	2 cut(s)	1483, 2451
FalI	AAGNNNNNCTT	6 cut(s)	552, 584, 897, 929, 971, 1003
FaqI	GGGAC	4 cut(s)	41, 138, 772, 906
FauNDI	CATATG	1 cut(s)	343
FbaI	TGATCA	1 cut(s)	2464
FblI	GTMKAC	1 cut(s)	1417
Fnu4HI	GCNGC	8 cut(s)	513, 798, 1122, 1449, 1548, 1740, 2137, 2193
FokI	GGATG	8 cut(s)	504, 639, 1325, 1537, 1727, 2060, 2064, 2194
FriOI	GRGCYC	2 cut(s)	1933, 1992
Fsp4HI	GCNGC	8 cut(s)	513, 798, 1122, 1449, 1548, 1740, 2137, 2193
FspBI	CTAG	8 cut(s)	312, 1406, 1806, 1934, 1980, 2105, 2286, 2511
GluI	GCNGC	8 cut(s)	513, 798, 1122, 1449, 1548, 1740, 2137, 2193
GsaI	CCCAGC	1 cut(s)	1713
GsuI	CTGGAG	4 cut(s)	787, 881, 1325, 1409
HaeIII	GGCC	2 cut(s)	1219, 2487
HapII	CCGG	3 cut(s)	337, 1264, 2399
HgaI	GACGC	1 cut(s)	362
Hin1I	GRCGYC	1 cut(s)	373
HincII	GTYRAC	1 cut(s)	229
HindII	GTYRAC	1 cut(s)	229
HinfI	GANTC	9 cut(s)	7, 586, 894, 910, 917, 1252, 1511, 1616, 1664
HpaII	CCGG	3 cut(s)	337, 1264, 2399
HphI	GGTGA	7 cut(s)	457, 1178, 1193, 1205, 2002, 2461, 2474
Hpy166II	GTNNAC	5 cut(s)	229, 481, 985, 1418, 1631
Hpy188III	TCNNGA	9 cut(s)	11, 402, 583, 877, 914, 1141, 1661, 1980, 2501
Hpy8I	GTNNAC	5 cut(s)	229, 481, 985, 1418, 1631
Hpy99I	CGWCG	1 cut(s)	2246
HpyAV	CCTTC	6 cut(s)	103, 515, 1648, 2087, 2094, 2203
HpyCH4IV	ACGT	2 cut(s)	266, 1411
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1264, 1736
HpyF3I	CTNAG	9 cut(s)	377, 1030, 1044, 1395, 1433, 1743, 2256, 2379, 2411
HpySE526I	ACGT	2 cut(s)	266, 1411
Hsp92I	GRCGYC	1 cut(s)	373
Ksp22I	TGATCA	1 cut(s)	2464
LmnI	GCTCC	4 cut(s)	366, 1595, 1807, 2426
Lsp1109I	GCAGC	7 cut(s)	524, 784, 1108, 1460, 1534, 1726, 2179
LweI	GCATC	6 cut(s)	482, 661, 840, 874, 1486, 1559
MaeI	CTAG	8 cut(s)	312, 1406, 1806, 1934, 1980, 2105, 2286, 2511
MaeII	ACGT	2 cut(s)	266, 1411
MaeIII	GTNAC	9 cut(s)	463, 518, 524, 595, 1111, 1721, 1795, 2290, 2361
MflI	RGATCY	3 cut(s)	1363, 1423, 1501
MhlI	GDGCHC	3 cut(s)	1600, 1933, 1992
MlsI	TGGCCA	1 cut(s)	2487
MluNI	TGGCCA	1 cut(s)	2487
MlyI	GAGTC	4 cut(s)	888, 904, 1261, 1610
MmeI	TCCRAC	1 cut(s)	1737
Mox20I	TGGCCA	1 cut(s)	2487
MroXI	GAANNNNTTC	2 cut(s)	564, 1776
MscI	TGGCCA	1 cut(s)	2487
MseI	TTAA	2 cut(s)	111, 1286
Msp20I	TGGCCA	1 cut(s)	2487
MspA1I	CMGCKG	1 cut(s)	2192
MspCI	CTTAAG	1 cut(s)	1285
MspI	CCGG	3 cut(s)	337, 1264, 2399
MspR9I	CCNGG	3 cut(s)	203, 2034, 2090
Mva1269I	GAATGC	1 cut(s)	1711
MvaI	CCWGG	3 cut(s)	203, 2034, 2090
MvnI	CGCG	1 cut(s)	1925
MwoI	GCNNNNNNNGC	2 cut(s)	1264, 1736
NcoI	CCATGG	2 cut(s)	754, 1912
NdeI	CATATG	1 cut(s)	343
NheI	GCTAGC	1 cut(s)	1405
NlaIV	GGNNCC	6 cut(s)	126, 760, 821, 1365, 1503, 1819
NmuCI	GTSAC	7 cut(s)	463, 524, 595, 1111, 1721, 1795, 2290
NspI	RCATGY	3 cut(s)	361, 697, 1405
NspV	TTCGAA	1 cut(s)	96
PaeR7I	CTCGAG	1 cut(s)	2366
PagI	TCATGA	1 cut(s)	1660
PcsI	WCGNNNNNNNCGW	1 cut(s)	1842
PctI	GAATGC	1 cut(s)	1711
PdmI	GAANNNNTTC	2 cut(s)	564, 1776
PfeI	GAWTC	5 cut(s)	7, 586, 917, 1511, 1664
PkrI	GCNGC	8 cut(s)	514, 799, 1123, 1450, 1549, 1741, 2138, 2194
PleI	GAGTC	4 cut(s)	888, 904, 1260, 1610
PmaCI	CACGTG	1 cut(s)	1412
PmlI	CACGTG	1 cut(s)	1412
PpsI	GAGTC	4 cut(s)	888, 904, 1260, 1610
Ppu21I	YACGTR	2 cut(s)	267, 1412
Psp124BI	GAGCTC	1 cut(s)	1933
Psp6I	CCWGG	3 cut(s)	201, 2032, 2088
PspCI	CACGTG	1 cut(s)	1412
PspFI	CCCAGC	1 cut(s)	1709
PspGI	CCWGG	3 cut(s)	201, 2032, 2088
PspN4I	GGNNCC	6 cut(s)	126, 760, 821, 1365, 1503, 1819
PspPI	GGNCC	5 cut(s)	125, 759, 1135, 1239, 1920
PspXI	VCTCGAGB	1 cut(s)	2366
PsrI	GAACNNNNNNTAC	2 cut(s)	413, 445
PstI	CTGCAG	1 cut(s)	843
PsuI	RGATCY	3 cut(s)	1363, 1423, 1501
PvuII	CAGCTG	1 cut(s)	2192
RsaI	GTAC	6 cut(s)	257, 265, 986, 1206, 1632, 2509
RsaNI	GTAC	6 cut(s)	256, 264, 985, 1205, 1631, 2508
SacI	GAGCTC	1 cut(s)	1933
SaqAI	TTAA	2 cut(s)	111, 1286
SatI	GCNGC	8 cut(s)	513, 798, 1122, 1449, 1548, 1740, 2137, 2193
Sau96I	GGNCC	5 cut(s)	125, 759, 1135, 1239, 1920
SbfI	CCTGCAGG	1 cut(s)	843
SchI	GAGTC	4 cut(s)	888, 904, 1261, 1610
ScrFI	CCNGG	3 cut(s)	203, 2034, 2090
SdaI	CCTGCAGG	1 cut(s)	843
SduI	GDGCHC	3 cut(s)	1600, 1933, 1992
SfaNI	GCATC	6 cut(s)	482, 661, 840, 874, 1486, 1559
SfcI	CTRYAG	3 cut(s)	168, 839, 1092
Sfr274I	CTCGAG	1 cut(s)	2366
SfuI	TTCGAA	1 cut(s)	96
SinI	GGWCC	5 cut(s)	125, 759, 1135, 1239, 1920
SlaI	CTCGAG	1 cut(s)	2366
SmlI	CTYRAG	5 cut(s)	940, 1139, 1285, 2366, 2499
SmoI	CTYRAG	5 cut(s)	940, 1139, 1285, 2366, 2499
Sse8387I	CCTGCAGG	1 cut(s)	843
SsiI	CCGC	4 cut(s)	476, 1124, 1923, 2137
SspI	AATATT	2 cut(s)	148, 1074
SspMI	CTAG	8 cut(s)	312, 1406, 1806, 1934, 1980, 2105, 2286, 2511
SstI	GAGCTC	1 cut(s)	1933
StyD4I	CCNGG	3 cut(s)	201, 2032, 2088
StyI	CCWWGG	6 cut(s)	706, 754, 1555, 1912, 2047, 2141
TaiI	ACGT	2 cut(s)	269, 1414
TaqI	TCGA	8 cut(s)	96, 589, 766, 975, 1667, 2131, 2244, 2367
TatI	WGTACW	2 cut(s)	984, 2507
TauI	GCSGC	1 cut(s)	2139
TfiI	GAWTC	5 cut(s)	7, 586, 917, 1511, 1664
Tru1I	TTAA	2 cut(s)	111, 1286
Tru9I	TTAA	2 cut(s)	111, 1286
TscAI	CASTG	6 cut(s)	82, 488, 1120, 1741, 1845, 2488
TseFI	GTSAC	7 cut(s)	463, 524, 595, 1111, 1721, 1795, 2290
TseI	GCWGC	7 cut(s)	512, 797, 1121, 1448, 1547, 1739, 2192
Tsp45I	GTSAC	7 cut(s)	463, 524, 595, 1111, 1721, 1795, 2290
TspGWI	ACGGA	2 cut(s)	353, 657
TspRI	CASTG	6 cut(s)	82, 488, 1120, 1741, 1845, 2488
Vha464I	CTTAAG	1 cut(s)	1285
VpaK11BI	GGWCC	5 cut(s)	125, 759, 1135, 1239, 1920
XagI	CCTNNNNNAGG	2 cut(s)	206, 2230
XapI	RAATTY	5 cut(s)	98, 776, 1868, 2037, 2384
XbaI	TCTAGA	1 cut(s)	1979
XceI	RCATGY	3 cut(s)	361, 697, 1405
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1681
XhoI	CTCGAG	1 cut(s)	2366
XmiI	GTMKAC	1 cut(s)	1417
XmnI	GAANNNNTTC	2 cut(s)	564, 1776
XspI	CTAG	8 cut(s)	312, 1406, 1806, 1934, 1980, 2105, 2286, 2511

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.