At1g04910-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G22460 |
| fragaria_vesca | FvH4_5g36600 |
| malus_domestica | MD08G1188100.v1.1 MD15G1374100.v1.1 |
| pyrus_communis | pycom08g16150 pycom15g33520 |
| rosa_chinensis | RchiOBHm_Chr7g0242381 |
| rosa_laevigata | RLG00000000897 |
| rosa_multiflora | Rmu_sc0000429.1_g000056 |
| rosa_roxburghii | Rroxscaffold_3G00222720 |
| rosa_rugosa | Rorug07G0315100 |
| rosa_samantha | Rh7AG470600 Rh7BG440500 Rh7CG487200 Rh7DG455700 |
| rosa_wichuraiana | Rw0G009510 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1626 |
| Acc65I | GGTACC | 2 cut(s) | 587, 1047 |
| AccB1I | GGYRCC | 3 cut(s) | 587, 1047, 1763 |
| AccII | CGCG | 2 cut(s) | 294, 1544 |
| AccIII | TCCGGA | 2 cut(s) | 454, 1262 |
| AciI | CCGC | 9 cut(s) | 29, 1038, 1076, 1542, 1544, 1589, 1738, 2223, 2377 |
| AclI | AACGTT | 1 cut(s) | 2196 |
| AclWI | GGATC | 8 cut(s) | 246, 819, 981, 1116, 1999, 2119, 2288, 2441 |
| AcsI | RAATTY | 6 cut(s) | 1026, 1393, 1856, 2053, 2089, 2263 |
| AcuI | CTGAAG | 2 cut(s) | 708, 930 |
| AdeI | CACNNNGTG | 1 cut(s) | 2144 |
| AfaI | GTAC | 4 cut(s) | 322, 366, 589, 1049 |
| AfeI | AGCGCT | 1 cut(s) | 765 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 951, 1044, 1566, 1676 |
| AjiI | CACGTC | 1 cut(s) | 97 |
| AjnI | CCWGG | 2 cut(s) | 1572, 2283 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1433, 1465 |
| Alw21I | GWGCWC | 2 cut(s) | 192, 1061 |
| Alw26I | GTCTC | 1 cut(s) | 1420 |
| AlwI | GGATC | 8 cut(s) | 246, 819, 981, 1116, 1999, 2119, 2288, 2441 |
| Ama87I | CYCGRG | 1 cut(s) | 348 |
| Aor13HI | TCCGGA | 2 cut(s) | 454, 1262 |
| Aor51HI | AGCGCT | 1 cut(s) | 765 |
| AoxI | GGCC | 4 cut(s) | 1981, 2101, 2371, 2557 |
| ApaI | GGGCCC | 2 cut(s) | 1985, 2105 |
| ApeKI | GCWGC | 9 cut(s) | 43, 683, 744, 1098, 1208, 1823, 1846, 2135, 2484 |
| ApoI | RAATTY | 6 cut(s) | 1026, 1393, 1856, 2053, 2089, 2263 |
| Asp718I | GGTACC | 2 cut(s) | 587, 1047 |
| AspLEI | GCGC | 4 cut(s) | 56, 217, 766, 2484 |
| AsuC2I | CCSGG | 3 cut(s) | 349, 350, 1978 |
| AsuHPI | GGTGA | 5 cut(s) | 894, 1027, 1283, 1429, 1523 |
| AsuNHI | GCTAGC | 2 cut(s) | 650, 2383 |
| AvaI | CYCGRG | 1 cut(s) | 348 |
| AvaII | GGWCC | 5 cut(s) | 121, 822, 830, 1557, 2408 |
| BaeGI | GKGCMC | 2 cut(s) | 1985, 2105 |
| BanI | GGYRCC | 3 cut(s) | 587, 1047, 1763 |
| BanII | GRGCYC | 3 cut(s) | 192, 1985, 2105 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2263, 2295 |
| BbsI | GAAGAC | 2 cut(s) | 522, 1322 |
| Bbv12I | GWGCWC | 2 cut(s) | 192, 1061 |
| BbvI | GCAGC | 9 cut(s) | 30, 670, 731, 1110, 1195, 1810, 1858, 2147, 2496 |
| BccI | CCATC | 3 cut(s) | 1060, 1198, 1927 |
| BceAI | ACGGC | 3 cut(s) | 581, 732, 2345 |
| BciT130I | CCWGG | 2 cut(s) | 1574, 2285 |
| BciVI | GTATCC | 1 cut(s) | 1870 |
| BclI | TGATCA | 1 cut(s) | 2413 |
| BcnI | CCSGG | 3 cut(s) | 349, 350, 1978 |
| BcoDI | GTCTC | 1 cut(s) | 1420 |
| BfaI | CTAG | 5 cut(s) | 362, 489, 651, 2165, 2384 |
| BfmI | CTRYAG | 3 cut(s) | 339, 420, 1683 |
| BfoI | RGCGCY | 2 cut(s) | 218, 767 |
| BfuAI | ACCTGC | 1 cut(s) | 1626 |
| BfuI | GTATCC | 1 cut(s) | 1870 |
| BglII | AGATCT | 1 cut(s) | 1114 |
| BlpI | GCTNAGC | 1 cut(s) | 703 |
| Bme1390I | CCNGG | 5 cut(s) | 349, 350, 1574, 1978, 2285 |
| Bme18I | GGWCC | 5 cut(s) | 121, 822, 830, 1557, 2408 |
| BmeT110I | CYCGRG | 1 cut(s) | 348 |
| BmgBI | CACGTC | 1 cut(s) | 97 |
| BmrFI | CCNGG | 5 cut(s) | 349, 350, 1574, 1978, 2285 |
| BmrI | ACTGGG | 1 cut(s) | 2308 |
| BmsI | GCATC | 6 cut(s) | 381, 875, 1169, 1205, 1702, 1810 |
| BmtI | GCTAGC | 2 cut(s) | 654, 2387 |
| BmuI | ACTGGG | 1 cut(s) | 2308 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1479 |
| BpiI | GAAGAC | 2 cut(s) | 522, 1322 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 166, 198 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 703 |
| BpuEI | CTTGAG | 1 cut(s) | 1385 |
| BpuMI | CCSGG | 3 cut(s) | 349, 350, 1978 |
| BsaJI | CCNNGG | 9 cut(s) | 348, 349, 570, 1042, 1542, 1573, 1977, 2283, 2462 |
| BsaWI | WCCGGW | 2 cut(s) | 454, 1262 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1309, 1339, 2181, 2211 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 951, 1044, 1566, 1676 |
| Bse1I | ACTGG | 6 cut(s) | 253, 582, 589, 956, 2314, 2591 |
| Bse3DI | GCAATG | 1 cut(s) | 798 |
| BseAI | TCCGGA | 2 cut(s) | 454, 1262 |
| BseBI | CCWGG | 2 cut(s) | 1574, 2285 |
| BseDI | CCNNGG | 9 cut(s) | 348, 349, 570, 1042, 1542, 1573, 1977, 2283, 2462 |
| BseGI | GGATG | 3 cut(s) | 822, 890, 1919 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 951, 1044, 1566, 1676 |
| BseMI | GCAATG | 1 cut(s) | 798 |
| BseMII | CTCAG | 4 cut(s) | 26, 197, 1214, 2022 |
| BseNI | ACTGG | 6 cut(s) | 253, 582, 589, 956, 2314, 2591 |
| BseRI | GAGGAG | 3 cut(s) | 875, 1184, 1756 |
| BseSI | GKGCMC | 2 cut(s) | 1985, 2105 |
| BseXI | GCAGC | 9 cut(s) | 30, 670, 731, 1110, 1195, 1810, 1858, 2147, 2496 |
| BseYI | CCCAGC | 1 cut(s) | 398 |
| BsgI | GTGCAG | 1 cut(s) | 1194 |
| Bsh1236I | CGCG | 2 cut(s) | 294, 1544 |
| BshFI | GGCC | 4 cut(s) | 1983, 2103, 2373, 2559 |
| BshNI | GGYRCC | 3 cut(s) | 587, 1047, 1763 |
| BsiHKAI | GWGCWC | 2 cut(s) | 192, 1061 |
| BsiHKCI | CYCGRG | 1 cut(s) | 348 |
| BsiSI | CCGG | 4 cut(s) | 349, 455, 1263, 1977 |
| BslFI | GGGAC | 9 cut(s) | 83, 107, 331, 1467, 1543, 1595, 1616, 2049, 2333 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 951, 1044, 1566, 1676 |
| BsmAI | GTCTC | 1 cut(s) | 1420 |
| BsmBI | CGTCTC | 1 cut(s) | 1420 |
| BsmFI | GGGAC | 9 cut(s) | 83, 107, 331, 1467, 1543, 1595, 1616, 2049, 2333 |
| BsmI | GAATGC | 1 cut(s) | 1746 |
| BsnI | GGCC | 4 cut(s) | 1983, 2103, 2373, 2559 |
| BsoBI | CYCGRG | 1 cut(s) | 348 |
| Bsp120I | GGGCCC | 2 cut(s) | 1981, 2101 |
| Bsp1286I | GDGCHC | 4 cut(s) | 192, 1061, 1985, 2105 |
| Bsp13I | TCCGGA | 2 cut(s) | 454, 1262 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 703 |
| Bsp19I | CCATGG | 1 cut(s) | 2462 |
| Bsp68I | TCGCGA | 1 cut(s) | 294 |
| BspACI | CCGC | 9 cut(s) | 29, 1038, 1076, 1542, 1544, 1589, 1738, 2223, 2377 |
| BspANI | GGCC | 4 cut(s) | 1983, 2103, 2373, 2559 |
| BspCNI | CTCAG | 4 cut(s) | 27, 196, 1213, 2021 |
| BspEI | TCCGGA | 2 cut(s) | 454, 1262 |
| BspFNI | CGCG | 2 cut(s) | 294, 1544 |
| BspMI | ACCTGC | 1 cut(s) | 1626 |
| BspOI | GCTAGC | 2 cut(s) | 654, 2387 |
| BspPI | GGATC | 8 cut(s) | 246, 819, 981, 1116, 1999, 2119, 2288, 2441 |
| BspT107I | GGYRCC | 3 cut(s) | 587, 1047, 1763 |
| BsrDI | GCAATG | 1 cut(s) | 798 |
| BsrI | ACTGG | 6 cut(s) | 253, 582, 589, 956, 2314, 2591 |
| BssECI | CCNNGG | 9 cut(s) | 348, 349, 570, 1042, 1542, 1573, 1977, 2283, 2462 |
| BssT1I | CCWWGG | 3 cut(s) | 570, 1042, 2462 |
| Bst2UI | CCWGG | 2 cut(s) | 1574, 2285 |
| Bst4CI | ACNGT | 6 cut(s) | 471, 1295, 1609, 1687, 1771, 2497 |
| Bst6I | CTCTTC | 2 cut(s) | 89, 1542 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2144 |
| BstC8I | GCNNGC | 8 cut(s) | 192, 396, 652, 873, 890, 1844, 2381, 2385 |
| BstDEI | CTNAG | 7 cut(s) | 35, 117, 183, 703, 923, 1200, 2008 |
| BstDSI | CCRYGG | 2 cut(s) | 1542, 2462 |
| BstEII | GGTNACC | 1 cut(s) | 1289 |
| BstF5I | GGATG | 3 cut(s) | 822, 890, 1919 |
| BstFNI | CGCG | 2 cut(s) | 294, 1544 |
| BstH2I | RGCGCY | 2 cut(s) | 218, 767 |
| BstHHI | GCGC | 4 cut(s) | 56, 217, 766, 2484 |
| BstMAI | GTCTC | 1 cut(s) | 1420 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 29, 77, 277, 1823, 2144 |
| BstNI | CCWGG | 2 cut(s) | 1574, 2285 |
| BstNSI | RCATGY | 3 cut(s) | 658, 871, 1758 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1479 |
| BstPI | GGTNACC | 1 cut(s) | 1289 |
| BstSCI | CCNGG | 5 cut(s) | 347, 348, 1572, 1976, 2283 |
| BstSFI | CTRYAG | 3 cut(s) | 339, 420, 1683 |
| BstSLI | GKGCMC | 2 cut(s) | 1985, 2105 |
| BstUI | CGCG | 2 cut(s) | 294, 1544 |
| BstV1I | GCAGC | 9 cut(s) | 30, 670, 731, 1110, 1195, 1810, 1858, 2147, 2496 |
| BstV2I | GAAGAC | 2 cut(s) | 522, 1322 |
| BstX2I | RGATCY | 4 cut(s) | 986, 1114, 1991, 2293 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 577 |
| BstYI | RGATCY | 4 cut(s) | 986, 1114, 1991, 2293 |
| BsuI | GTATCC | 1 cut(s) | 1870 |
| BsuRI | GGCC | 4 cut(s) | 1983, 2103, 2373, 2559 |
| BtgI | CCRYGG | 2 cut(s) | 1542, 2462 |
| BtrI | CACGTC | 1 cut(s) | 97 |
| BtsCI | GGATG | 3 cut(s) | 822, 890, 1919 |
| BtsIMutI | CAGTG | 6 cut(s) | 32, 1767, 2249, 2321, 2442, 2502 |
| BtuMI | TCGCGA | 1 cut(s) | 294 |
| BveI | ACCTGC | 1 cut(s) | 1626 |
| Cac8I | GCNNGC | 8 cut(s) | 192, 396, 652, 873, 890, 1844, 2381, 2385 |
| CfoI | GCGC | 4 cut(s) | 56, 217, 766, 2484 |
| Cfr42I | CCGCGG | 1 cut(s) | 1545 |
| Cfr9I | CCCGGG | 1 cut(s) | 348 |
| Csp6I | GTAC | 4 cut(s) | 321, 365, 588, 1048 |
| CviAII | CATG | 9 cut(s) | 306, 412, 655, 868, 1193, 1270, 1472, 1755, 2463 |
| CviQI | GTAC | 4 cut(s) | 321, 365, 588, 1048 |
| DdeI | CTNAG | 7 cut(s) | 35, 117, 183, 703, 923, 1200, 2008 |
| DraIII | CACNNNGTG | 1 cut(s) | 2144 |
| Eam1104I | CTCTTC | 2 cut(s) | 89, 1542 |
| EarI | CTCTTC | 2 cut(s) | 89, 1542 |
| Ecl136II | GAGCTC | 1 cut(s) | 190 |
| Eco130I | CCWWGG | 3 cut(s) | 570, 1042, 2462 |
| Eco24I | GRGCYC | 3 cut(s) | 192, 1985, 2105 |
| Eco32I | GATATC | 1 cut(s) | 1667 |
| Eco47I | GGWCC | 5 cut(s) | 121, 822, 830, 1557, 2408 |
| Eco47III | AGCGCT | 1 cut(s) | 765 |
| Eco53kI | GAGCTC | 1 cut(s) | 190 |
| Eco57I | CTGAAG | 2 cut(s) | 708, 930 |
| Eco88I | CYCGRG | 1 cut(s) | 348 |
| Eco91I | GGTNACC | 1 cut(s) | 1289 |
| EcoICRI | GAGCTC | 1 cut(s) | 190 |
| EcoO109I | RGGNCCY | 7 cut(s) | 121, 822, 1557, 1981, 2101, 2102, 2408 |
| EcoO65I | GGTNACC | 1 cut(s) | 1289 |
| EcoRI | GAATTC | 1 cut(s) | 2089 |
| EcoRII | CCWGG | 2 cut(s) | 1572, 2283 |
| EcoRV | GATATC | 1 cut(s) | 1667 |
| EcoT14I | CCWWGG | 3 cut(s) | 570, 1042, 2462 |
| EcoT22I | ATGCAT | 1 cut(s) | 1198 |
| EcoT38I | GRGCYC | 3 cut(s) | 192, 1985, 2105 |
| ErhI | CCWWGG | 3 cut(s) | 570, 1042, 2462 |
| Esp3I | CGTCTC | 1 cut(s) | 1420 |
| FaeI | CATG | 9 cut(s) | 309, 415, 658, 871, 1196, 1273, 1475, 1758, 2466 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1865, 1897, 2144, 2176 |
| FaqI | GGGAC | 9 cut(s) | 83, 107, 331, 1467, 1543, 1595, 1616, 2049, 2333 |
| FatI | CATG | 9 cut(s) | 305, 411, 654, 867, 1192, 1269, 1471, 1754, 2462 |
| FauI | CCCGC | 2 cut(s) | 1549, 2384 |
| FauNDI | CATATG | 3 cut(s) | 59, 1107, 2227 |
| FbaI | TGATCA | 1 cut(s) | 2413 |
| FokI | GGATG | 3 cut(s) | 829, 897, 1906 |
| FriOI | GRGCYC | 3 cut(s) | 192, 1985, 2105 |
| FspBI | CTAG | 5 cut(s) | 362, 489, 651, 2165, 2384 |
| GlaI | GCGC | 4 cut(s) | 55, 216, 765, 2483 |
| GsaI | CCCAGC | 1 cut(s) | 402 |
| HaeII | RGCGCY | 2 cut(s) | 218, 767 |
| HaeIII | GGCC | 4 cut(s) | 1983, 2103, 2373, 2559 |
| HapII | CCGG | 4 cut(s) | 349, 455, 1263, 1977 |
| HhaI | GCGC | 4 cut(s) | 56, 217, 766, 2484 |
| Hin1II | CATG | 9 cut(s) | 309, 415, 658, 871, 1196, 1273, 1475, 1758, 2466 |
| Hin6I | GCGC | 4 cut(s) | 54, 215, 764, 2482 |
| HinP1I | GCGC | 4 cut(s) | 54, 215, 764, 2482 |
| HincII | GTYRAC | 2 cut(s) | 162, 1501 |
| HindII | GTYRAC | 2 cut(s) | 162, 1501 |
| HindIII | AAGCTT | 2 cut(s) | 563, 737 |
| HinfI | GANTC | 7 cut(s) | 181, 344, 485, 695, 927, 1178, 2001 |
| HpaII | CCGG | 4 cut(s) | 349, 455, 1263, 1977 |
| HphI | GGTGA | 5 cut(s) | 894, 1027, 1283, 1429, 1523 |
| Hpy166II | GTNNAC | 3 cut(s) | 94, 162, 1501 |
| Hpy8I | GTNNAC | 3 cut(s) | 94, 162, 1501 |
| Hpy99I | CGWCG | 1 cut(s) | 1299 |
| HpyCH4III | ACNGT | 6 cut(s) | 471, 1295, 1609, 1687, 1771, 2497 |
| HpyCH4IV | ACGT | 5 cut(s) | 50, 96, 769, 1503, 2196 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 29, 77, 277, 1823, 2144 |
| HpyF3I | CTNAG | 7 cut(s) | 35, 117, 183, 703, 923, 1200, 2008 |
| HpySE526I | ACGT | 5 cut(s) | 50, 96, 769, 1503, 2196 |
| Hsp92II | CATG | 9 cut(s) | 309, 415, 658, 871, 1196, 1273, 1475, 1758, 2466 |
| HspAI | GCGC | 4 cut(s) | 54, 215, 764, 2482 |
| Kpn2I | TCCGGA | 2 cut(s) | 454, 1262 |
| KpnI | GGTACC | 2 cut(s) | 591, 1051 |
| Ksp22I | TGATCA | 1 cut(s) | 2413 |
| KspI | CCGCGG | 1 cut(s) | 1545 |
| LmnI | GCTCC | 6 cut(s) | 153, 187, 199, 1171, 1743, 2287 |
| Lsp1109I | GCAGC | 9 cut(s) | 30, 670, 731, 1110, 1195, 1810, 1858, 2147, 2496 |
| LweI | GCATC | 6 cut(s) | 381, 875, 1169, 1205, 1702, 1810 |
| MaeI | CTAG | 5 cut(s) | 362, 489, 651, 2165, 2384 |
| MaeII | ACGT | 5 cut(s) | 50, 96, 769, 1503, 2196 |
| MaeIII | GTNAC | 3 cut(s) | 407, 1289, 1307 |
| MboII | GAAGA | 7 cut(s) | 19, 22, 76, 527, 674, 1327, 1559 |
| MflI | RGATCY | 4 cut(s) | 986, 1114, 1991, 2293 |
| MhlI | GDGCHC | 4 cut(s) | 192, 1061, 1985, 2105 |
| MlyI | GAGTC | 3 cut(s) | 175, 353, 479 |
| MmeI | TCCRAC | 2 cut(s) | 216, 1003 |
| Mph1103I | ATGCAT | 1 cut(s) | 1198 |
| MroI | TCCGGA | 2 cut(s) | 454, 1262 |
| MseI | TTAA | 4 cut(s) | 600, 1007, 1734, 2151 |
| MslI | CAYNNNNRTG | 1 cut(s) | 372 |
| MspA1I | CMGCKG | 2 cut(s) | 908, 1544 |
| MspI | CCGG | 4 cut(s) | 349, 455, 1263, 1977 |
| MspR9I | CCNGG | 5 cut(s) | 349, 350, 1574, 1978, 2285 |
| Mva1269I | GAATGC | 1 cut(s) | 1746 |
| MvaI | CCWGG | 2 cut(s) | 1574, 2285 |
| MvnI | CGCG | 2 cut(s) | 294, 1544 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 29, 77, 277, 1823, 2144 |
| NciI | CCSGG | 3 cut(s) | 349, 350, 1978 |
| NcoI | CCATGG | 1 cut(s) | 2462 |
| NdeI | CATATG | 3 cut(s) | 59, 1107, 2227 |
| NheI | GCTAGC | 2 cut(s) | 650, 2383 |
| NlaIII | CATG | 9 cut(s) | 309, 415, 658, 871, 1196, 1273, 1475, 1758, 2466 |
| NmeAIII | GCCGAG | 1 cut(s) | 2513 |
| NmuCI | GTSAC | 3 cut(s) | 407, 1289, 1307 |
| NruI | TCGCGA | 1 cut(s) | 294 |
| NsiI | ATGCAT | 1 cut(s) | 1198 |
| NspI | RCATGY | 3 cut(s) | 658, 871, 1758 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1846 |
| PctI | GAATGC | 1 cut(s) | 1746 |
| PfeI | GAWTC | 4 cut(s) | 695, 927, 1178, 2001 |
| PleI | GAGTC | 3 cut(s) | 175, 352, 479 |
| PpsI | GAGTC | 3 cut(s) | 175, 352, 479 |
| PpuMI | RGGWCCY | 4 cut(s) | 121, 822, 1557, 2408 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1479 |
| Psp124BI | GAGCTC | 1 cut(s) | 192 |
| Psp1406I | AACGTT | 1 cut(s) | 2196 |
| Psp5II | RGGWCCY | 4 cut(s) | 121, 822, 1557, 2408 |
| Psp6I | CCWGG | 2 cut(s) | 1572, 2283 |
| PspEI | GGTNACC | 1 cut(s) | 1289 |
| PspFI | CCCAGC | 1 cut(s) | 398 |
| PspGI | CCWGG | 2 cut(s) | 1572, 2283 |
| PspOMI | GGGCCC | 2 cut(s) | 1981, 2101 |
| PspPPI | RGGWCCY | 4 cut(s) | 121, 822, 1557, 2408 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 932, 964 |
| PsuI | RGATCY | 4 cut(s) | 986, 1114, 1991, 2293 |
| PvuII | CAGCTG | 1 cut(s) | 908 |
| RruI | TCGCGA | 1 cut(s) | 294 |
| RsaI | GTAC | 4 cut(s) | 322, 366, 589, 1049 |
| RsaNI | GTAC | 4 cut(s) | 321, 365, 588, 1048 |
| RseI | CAYNNNNRTG | 1 cut(s) | 372 |
| SacI | GAGCTC | 1 cut(s) | 192 |
| SacII | CCGCGG | 1 cut(s) | 1545 |
| SaqAI | TTAA | 4 cut(s) | 600, 1007, 1734, 2151 |
| SchI | GAGTC | 3 cut(s) | 175, 353, 479 |
| ScrFI | CCNGG | 5 cut(s) | 349, 350, 1574, 1978, 2285 |
| SduI | GDGCHC | 4 cut(s) | 192, 1061, 1985, 2105 |
| SfaNI | GCATC | 6 cut(s) | 381, 875, 1169, 1205, 1702, 1810 |
| SfcI | CTRYAG | 3 cut(s) | 339, 420, 1683 |
| Sfr303I | CCGCGG | 1 cut(s) | 1545 |
| SgrBI | CCGCGG | 1 cut(s) | 1545 |
| SinI | GGWCC | 5 cut(s) | 121, 822, 830, 1557, 2408 |
| SmaI | CCCGGG | 1 cut(s) | 350 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 372 |
| SmlI | CTYRAG | 1 cut(s) | 1364 |
| SmoI | CTYRAG | 1 cut(s) | 1364 |
| SsiI | CCGC | 9 cut(s) | 29, 1038, 1076, 1542, 1544, 1589, 1738, 2223, 2377 |
| SspMI | CTAG | 5 cut(s) | 362, 489, 651, 2165, 2384 |
| SstI | GAGCTC | 1 cut(s) | 192 |
| StyD4I | CCNGG | 5 cut(s) | 347, 348, 1572, 1976, 2283 |
| StyI | CCWWGG | 3 cut(s) | 570, 1042, 2462 |
| TaaI | ACNGT | 6 cut(s) | 471, 1295, 1609, 1687, 1771, 2497 |
| TaiI | ACGT | 5 cut(s) | 53, 99, 772, 1506, 2199 |
| TaqI | TCGA | 6 cut(s) | 510, 679, 934, 1055, 1167, 1405 |
| TatI | WGTACW | 1 cut(s) | 364 |
| TauI | GCSGC | 2 cut(s) | 32, 1079 |
| TfiI | GAWTC | 4 cut(s) | 695, 927, 1178, 2001 |
| Tru1I | TTAA | 4 cut(s) | 600, 1007, 1734, 2151 |
| Tru9I | TTAA | 4 cut(s) | 600, 1007, 1734, 2151 |
| TscAI | CASTG | 6 cut(s) | 39, 1774, 2249, 2321, 2449, 2502 |
| TseFI | GTSAC | 3 cut(s) | 407, 1289, 1307 |
| TseI | GCWGC | 9 cut(s) | 43, 683, 744, 1098, 1208, 1823, 1846, 2135, 2484 |
| Tsp45I | GTSAC | 3 cut(s) | 407, 1289, 1307 |
| TspDTI | ATGAA | 6 cut(s) | 528, 774, 933, 1157, 1245, 2357 |
| TspGWI | ACGGA | 1 cut(s) | 1444 |
| TspMI | CCCGGG | 1 cut(s) | 348 |
| TspRI | CASTG | 6 cut(s) | 39, 1774, 2249, 2321, 2449, 2502 |
| VpaK11BI | GGWCC | 5 cut(s) | 121, 822, 830, 1557, 2408 |
| XapI | RAATTY | 6 cut(s) | 1026, 1393, 1856, 2053, 2089, 2263 |
| XceI | RCATGY | 3 cut(s) | 658, 871, 1758 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 204, 395, 1774 |
| XmaI | CCCGGG | 1 cut(s) | 348 |
| XspI | CTAG | 5 cut(s) | 362, 489, 651, 2165, 2384 |
| Zsp2I | ATGCAT | 1 cut(s) | 1198 |