Rmu_sc0000882.1_g000022

Cleavage inducing molecular chaperone

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000882.1
Physical Location & Seq
Forward (+)
101873 .. 107275
5403 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000882.1_g000022.1.cds

Sequence Viewer

Length: 1665 bp
atggaggatatagggctatacaagcaaggcttgaaatggctgcagtctcagaagcacgtttattttagatcgaaaacagctgtcagtggatatagagataaaatggggatgtttgcagagcggcattggccgatggtgtgcagtgggtgctccagaatggggcggctgttgctcttgttgttgtgttattggagggactgtgttgtaagaggctttcggtcatttatagggtttggttctgcagctttgcttcttataatgtggagttgctttctcagtttgacttccatgtcttgcttggtttatgtgcttctcagtatgggagtcgctggagctgctgttcattacttgggatacactcccggaatttttattgtagggctcttcgctattctgatcttatggatgtatgctaacttttggataacaggaacattatttatagttggaggttatttgttctcccttaatcatgcacggttggtggtcttgatggcaaccgtatatgctatttattgtgtcaaagtacaagttggatggcatggggttctgctcgcaataaaccttgccttcttctccaacgatgtattaaattatattctccaatggtgtgataaggtgactgagagcccacattttgaagagcagaaacaatcagaagaagtaatggaagatgacttttctacagagtgtgattactctattcctactgatgaacctgaaaaggtgcactcatgtaaatcatcgagcaagccagctacttcagctgtcattaatattgagaaagaatcctgttctagtagtaaggtggtcaaagaggaaacaagttcagccgatgagatgcaaaaaatactaagcagtattaatcattatgaagcactgggatttcctcgccaccagaaaattgatgctgcaactttgaaaaaggaataccggaagaaggccatgcttgtgcatcctgataaaaatatgggaagtgcactagcaagtgagtcatttaagagacttcaatgtgcatatgaggttctttcggattccataaagaaaagagattatgatgagcaattacggaaggaagaatcaaagactaagagtgtgtgccagacctctcatgctacttcagctcaggacggtccaggttattgttctgaagagtcgcgacgtatacaatgcaccaagtgtggaaattctcatatatgggtgtgcaccaatagaagtaagaccaaggctagatggtgtcaggattgctgccaatatcatcaagcaaaggatggagatggatgggtcgagtacaaaggatccatagtctttgataggcctcagaaggtggaaataccgcgagcttttgtttgtgctgagagcaaaatctttgatgtgtcggaatgggcaatttgtcagggaatggcatgtaggcccaacacccatcggcctagtttccatgtaaacatggttggtttggagaaaactcaaagatcccactcaagtagattcccatgggagttggatgctgaaatgatggatgaagatgaagaagaatttgaggtgtggcttcagcaagctctggcctcgggtctcttttgtgagtcctcaaaacgccgaaaaagttgggctccattcaagtttcatcaattggggaagaagcaatggcgaagaacttcgtgctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

554

Amino Acids

63.34

Weight (kDa)

8.28

Isoelectric Point (pI)

52.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 257
AasI GACNNNNNNGTC 1 cut(s) 289
AccBSI CCGCTC 1 cut(s) 121
AccI GTMKAC 1 cut(s) 1165
AccII CGCG 2 cut(s) 1159, 1339
AciI CCGC 3 cut(s) 121, 163, 1337
AclWI GGATC 3 cut(s) 1293, 1306, 1467
AcoI YGGCCR 1 cut(s) 128
AcsI RAATTY 3 cut(s) 366, 1186, 1535
AcuI CTGAAG 4 cut(s) 747, 1104, 1170, 1535
AdeI CACNNNGTG 1 cut(s) 1179
AfaI GTAC 2 cut(s) 528, 1292
AfiI CCNNNNNNNGG 2 cut(s) 159, 940
AgsI TTSAA 5 cut(s) 34, 641, 922, 1010, 1618
AjnI CCWGG 1 cut(s) 1135
AloI GAACNNNNNNTCC 2 cut(s) 324, 356
AluBI AGCT 8 cut(s) 80, 245, 335, 758, 767, 1124, 1343, 1559
AluI AGCT 8 cut(s) 80, 245, 335, 758, 767, 1124, 1343, 1559
Alw21I GWGCWC 4 cut(s) 152, 732, 982, 1208
Alw26I GTCTC 3 cut(s) 51, 997, 1577
Alw44I GTGCAC 3 cut(s) 728, 978, 1204
AlwI GGATC 3 cut(s) 1293, 1306, 1467
Ama87I CYCGRG 1 cut(s) 1567
AoxI GGCC 6 cut(s) 128, 942, 1316, 1412, 1427, 1563
ApaLI GTGCAC 3 cut(s) 728, 978, 1204
ApeKI GCWGC 5 cut(s) 40, 242, 335, 911, 1248
ApoI RAATTY 3 cut(s) 366, 1186, 1535
AseI ATTAAT 2 cut(s) 774, 864
Asp700I GAANNNNTTC 1 cut(s) 1654
AspS9I GGNCC 2 cut(s) 1133, 1413
AsuC2I CCSGG 1 cut(s) 363
AsuHPI GGTGA 1 cut(s) 631
AvaI CYCGRG 1 cut(s) 1567
AvaII GGWCC 1 cut(s) 1133
BaeGI GKGCMC 3 cut(s) 732, 982, 1208
BamHI GGATCC 1 cut(s) 1298
BanII GRGCYC 3 cut(s) 384, 632, 1612
Bbv12I GWGCWC 4 cut(s) 152, 732, 982, 1208
BbvI GCAGC 5 cut(s) 27, 254, 322, 898, 1235
BccI CCATC 9 cut(s) 127, 487, 531, 1227, 1265, 1271, 1275, 1431, 1510
BciT130I CCWGG 1 cut(s) 1137
BciVI GTATCC 1 cut(s) 347
BcnI CCSGG 1 cut(s) 363
BcoDI GTCTC 3 cut(s) 51, 997, 1577
BfaI CTAG 4 cut(s) 798, 983, 1230, 1431
BfmI CTRYAG 3 cut(s) 41, 240, 684
BfuI GTATCC 1 cut(s) 347
BisI GCNGC 7 cut(s) 41, 122, 164, 243, 336, 912, 1249
BlsI GCNGC 7 cut(s) 42, 123, 165, 244, 337, 913, 1250
Bme1390I CCNGG 2 cut(s) 363, 1137
Bme18I GGWCC 1 cut(s) 1133
BmeT110I CYCGRG 1 cut(s) 1567
BmgT120I GGNCC 2 cut(s) 1133, 1413
BmiI GGNNCC 2 cut(s) 1300, 1611
BmrFI CCNGG 2 cut(s) 363, 1137
BmrI ACTGGG 1 cut(s) 890
BmsI GCATC 4 cut(s) 831, 898, 964, 1495
BmuI ACTGGG 1 cut(s) 890
BpmI CTGGAG 2 cut(s) 136, 351
Bpu10I CCTNAGC 1 cut(s) 1125
BpuEI CTTGAG 1 cut(s) 1465
BpuMI CCSGG 1 cut(s) 363
BsaI GGTCTC 1 cut(s) 1577
BsaJI CCNNGG 3 cut(s) 1224, 1493, 1566
BsaWI WCCGGW 1 cut(s) 933
BsaXI ACNNNNNCTCC 4 cut(s) 184, 214, 324, 354
Bsc4I CCNNNNNNNGG 2 cut(s) 159, 940
Bse1I ACTGG 1 cut(s) 885
Bse3DI GCAATG 1 cut(s) 1649
BseBI CCWGG 1 cut(s) 1137
BseDI CCNNGG 3 cut(s) 1224, 1493, 1566
BseGI GGATG 8 cut(s) 114, 411, 542, 955, 1276, 1286, 1510, 1525
BseLI CCNNNNNNNGG 2 cut(s) 159, 940
BseMI GCAATG 1 cut(s) 1649
BseMII CTCAG 7 cut(s) 62, 289, 328, 615, 1139, 1334, 1347
BseNI ACTGG 1 cut(s) 885
BseSI GKGCMC 3 cut(s) 732, 982, 1208
BseXI GCAGC 5 cut(s) 27, 254, 322, 898, 1235
BsgI GTGCAG 1 cut(s) 160
Bsh1236I CGCG 2 cut(s) 1159, 1339
BshFI GGCC 6 cut(s) 130, 944, 1318, 1414, 1429, 1565
BsiHKAI GWGCWC 4 cut(s) 152, 732, 982, 1208
BsiHKCI CYCGRG 1 cut(s) 1567
BsiSI CCGG 2 cut(s) 363, 934
BslFI GGGAC 1 cut(s) 209
BslI CCNNNNNNNGG 2 cut(s) 159, 940
BsmAI GTCTC 3 cut(s) 51, 997, 1577
BsmFI GGGAC 1 cut(s) 209
BsnI GGCC 6 cut(s) 130, 944, 1318, 1414, 1429, 1565
Bso31I GGTCTC 1 cut(s) 1577
BsoBI CYCGRG 1 cut(s) 1567
Bsp1286I GDGCHC 7 cut(s) 152, 384, 632, 732, 982, 1208, 1612
Bsp143I GATC 4 cut(s) 68, 396, 1298, 1472
Bsp19I CCATGG 1 cut(s) 1493
Bsp68I TCGCGA 1 cut(s) 1159
BspACI CCGC 3 cut(s) 121, 163, 1337
BspANI GGCC 6 cut(s) 130, 944, 1318, 1414, 1429, 1565
BspCNI CTCAG 7 cut(s) 61, 288, 327, 616, 1138, 1333, 1348
BspFNI CGCG 2 cut(s) 1159, 1339
BspLI GGNNCC 2 cut(s) 1300, 1611
BspMAI CTGCAG 2 cut(s) 45, 244
BspPI GGATC 3 cut(s) 1293, 1306, 1467
BspQI GCTCTTC 2 cut(s) 389, 636
BspTNI GGTCTC 1 cut(s) 1577
BsrBI CCGCTC 1 cut(s) 121
BsrDI GCAATG 1 cut(s) 1649
BsrI ACTGG 1 cut(s) 885
BssECI CCNNGG 3 cut(s) 1224, 1493, 1566
BssMI GATC 4 cut(s) 68, 396, 1298, 1472
BssNAI GTATAC 1 cut(s) 1166
BssT1I CCWWGG 2 cut(s) 1224, 1493
Bst1107I GTATAC 1 cut(s) 1166
Bst2UI CCWGG 1 cut(s) 1137
Bst4CI ACNGT 4 cut(s) 200, 480, 502, 1133
Bst6I CTCTTC 3 cut(s) 389, 636, 1146
BstAPI GCANNNNNTGC 1 cut(s) 147
BstC8I GCNNGC 5 cut(s) 555, 752, 756, 1341, 1557
BstDEI CTNAG 9 cut(s) 48, 275, 314, 624, 854, 1089, 1125, 1320, 1356
BstDSI CCRYGG 1 cut(s) 1493
BstF5I GGATG 8 cut(s) 114, 411, 542, 955, 1276, 1286, 1510, 1525
BstFNI CGCG 2 cut(s) 1159, 1339
BstKTI GATC 4 cut(s) 71, 399, 1301, 1475
BstMAI GTCTC 3 cut(s) 51, 997, 1577
BstMBI GATC 4 cut(s) 68, 396, 1298, 1472
BstMWI GCNNNNNNNGC 7 cut(s) 22, 127, 147, 169, 335, 764, 1121
BstNI CCWGG 1 cut(s) 1137
BstNSI RCATGY 1 cut(s) 1410
BstSCI CCNGG 2 cut(s) 361, 1135
BstSFI CTRYAG 3 cut(s) 41, 240, 684
BstSLI GKGCMC 3 cut(s) 732, 982, 1208
BstUI CGCG 2 cut(s) 1159, 1339
BstV1I GCAGC 5 cut(s) 27, 254, 322, 898, 1235
BstX2I RGATCY 2 cut(s) 1298, 1472
BstYI RGATCY 2 cut(s) 1298, 1472
BstZ17I GTATAC 1 cut(s) 1166
BsuI GTATCC 1 cut(s) 347
BsuRI GGCC 6 cut(s) 130, 944, 1318, 1414, 1429, 1565
BtgI CCRYGG 1 cut(s) 1493
BtsCI GGATG 8 cut(s) 114, 411, 542, 955, 1276, 1286, 1510, 1525
BtsI GCAGTG 1 cut(s) 148
BtsIMutI CAGTG 3 cut(s) 91, 148, 878
BtuMI TCGCGA 1 cut(s) 1159
Cac8I GCNNGC 5 cut(s) 555, 752, 756, 1341, 1557
Cfr13I GGNCC 2 cut(s) 1133, 1413
Csp6I GTAC 2 cut(s) 527, 1291
CviQI GTAC 2 cut(s) 527, 1291
DdeI CTNAG 9 cut(s) 48, 275, 314, 624, 854, 1089, 1125, 1320, 1356
DpnI GATC 4 cut(s) 70, 398, 1300, 1474
DpnII GATC 4 cut(s) 68, 396, 1298, 1472
DraIII CACNNNGTG 1 cut(s) 1179
DrdI GACNNNNNNGTC 1 cut(s) 289
DseDI GACNNNNNNGTC 1 cut(s) 289
EaeI YGGCCR 1 cut(s) 128
Eam1104I CTCTTC 3 cut(s) 389, 636, 1146
EarI CTCTTC 3 cut(s) 389, 636, 1146
Eco130I CCWWGG 2 cut(s) 1224, 1493
Eco147I AGGCCT 1 cut(s) 1318
Eco24I GRGCYC 3 cut(s) 384, 632, 1612
Eco31I GGTCTC 1 cut(s) 1577
Eco47I GGWCC 1 cut(s) 1133
Eco57I CTGAAG 4 cut(s) 747, 1104, 1170, 1535
Eco88I CYCGRG 1 cut(s) 1567
EcoRII CCWGG 1 cut(s) 1135
EcoT14I CCWWGG 2 cut(s) 1224, 1493
EcoT38I GRGCYC 3 cut(s) 384, 632, 1612
ErhI CCWWGG 2 cut(s) 1224, 1493
FalI AAGNNNNNCTT 2 cut(s) 14, 46
FaqI GGGAC 1 cut(s) 209
FauNDI CATATG 1 cut(s) 1018
FblI GTMKAC 1 cut(s) 1165
Fnu4HI GCNGC 7 cut(s) 41, 122, 164, 243, 336, 912, 1249
FokI GGATG 8 cut(s) 121, 418, 549, 942, 1283, 1293, 1517, 1532
FriOI GRGCYC 3 cut(s) 384, 632, 1612
Fsp4HI GCNGC 7 cut(s) 41, 122, 164, 243, 336, 912, 1249
FspBI CTAG 4 cut(s) 798, 983, 1230, 1431
GluI GCNGC 7 cut(s) 41, 122, 164, 243, 336, 912, 1249
GsuI CTGGAG 2 cut(s) 136, 351
HaeIII GGCC 6 cut(s) 130, 944, 1318, 1414, 1429, 1565
HapII CCGG 2 cut(s) 363, 934
HinfI GANTC 8 cut(s) 324, 788, 992, 1034, 1079, 1154, 1488, 1583
HpaII CCGG 2 cut(s) 363, 934
HphI GGTGA 1 cut(s) 631
Hpy166II GTNNAC 5 cut(s) 730, 980, 1166, 1206, 1444
Hpy188I TCNGA 7 cut(s) 51, 396, 658, 1033, 1150, 1323, 1381
Hpy188III TCNNGA 6 cut(s) 153, 490, 959, 1127, 1158, 1241
Hpy8I GTNNAC 5 cut(s) 730, 980, 1166, 1206, 1444
Hpy99I CGWCG 1 cut(s) 1164
HpyAV CCTTC 4 cut(s) 580, 934, 1066, 1318
HpyCH4III ACNGT 4 cut(s) 200, 480, 502, 1133
HpyCH4IV ACGT 2 cut(s) 57, 1162
HpyF10VI GCNNNNNNNGC 7 cut(s) 22, 127, 147, 169, 335, 764, 1121
HpyF3I CTNAG 9 cut(s) 48, 275, 314, 624, 854, 1089, 1125, 1320, 1356
HpySE526I ACGT 2 cut(s) 57, 1162
Kzo9I GATC 4 cut(s) 68, 396, 1298, 1472
LguI GCTCTTC 2 cut(s) 389, 636
LmnI GCTCC 3 cut(s) 155, 332, 1615
Lsp1109I GCAGC 5 cut(s) 27, 254, 322, 898, 1235
LweI GCATC 4 cut(s) 831, 898, 964, 1495
MaeI CTAG 4 cut(s) 798, 983, 1230, 1431
MaeII ACGT 2 cut(s) 57, 1162
MaeIII GTNAC 1 cut(s) 619
MalI GATC 4 cut(s) 70, 398, 1300, 1474
MbiI CCGCTC 1 cut(s) 121
MboI GATC 4 cut(s) 68, 396, 1298, 1472
MfeI CAATTG 1 cut(s) 1628
MflI RGATCY 2 cut(s) 1298, 1472
MhlI GDGCHC 7 cut(s) 152, 384, 632, 732, 982, 1208, 1612
MluCI AATT 8 cut(s) 366, 592, 903, 1064, 1186, 1389, 1535, 1628
MlyI GAGTC 4 cut(s) 333, 1001, 1163, 1592
MmeI TCCRAC 5 cut(s) 427, 514, 603, 1359, 1482
MroXI GAANNNNTTC 1 cut(s) 1654
MseI TTAA 5 cut(s) 468, 590, 774, 864, 999
MslI CAYNNNNRTG 1 cut(s) 950
MspA1I CMGCKG 2 cut(s) 80, 767
MspI CCGG 2 cut(s) 363, 934
MspR9I CCNGG 2 cut(s) 363, 1137
MunI CAATTG 1 cut(s) 1628
MvaI CCWGG 1 cut(s) 1137
MvnI CGCG 2 cut(s) 1159, 1339
MwoI GCNNNNNNNGC 7 cut(s) 22, 127, 147, 169, 335, 764, 1121
NciI CCSGG 1 cut(s) 363
NcoI CCATGG 1 cut(s) 1493
NdeI CATATG 1 cut(s) 1018
NdeII GATC 4 cut(s) 68, 396, 1298, 1472
NlaIV GGNNCC 2 cut(s) 1300, 1611
NmuCI GTSAC 1 cut(s) 619
NruI TCGCGA 1 cut(s) 1159
NspI RCATGY 1 cut(s) 1410
PceI AGGCCT 1 cut(s) 1318
PciSI GCTCTTC 2 cut(s) 389, 636
PdmI GAANNNNTTC 1 cut(s) 1654
PfeI GAWTC 4 cut(s) 788, 1034, 1079, 1488
PfoI TCCNGGA 1 cut(s) 361
PkrI GCNGC 7 cut(s) 42, 123, 165, 244, 337, 913, 1250
PleI GAGTC 4 cut(s) 332, 1000, 1162, 1591
PpsI GAGTC 4 cut(s) 332, 1000, 1162, 1591
PshBI ATTAAT 2 cut(s) 774, 864
PsiI TTATAA 1 cut(s) 257
Psp6I CCWGG 1 cut(s) 1135
PspGI CCWGG 1 cut(s) 1135
PspN4I GGNNCC 2 cut(s) 1300, 1611
PspPI GGNCC 2 cut(s) 1133, 1413
PstI CTGCAG 2 cut(s) 45, 244
PsuI RGATCY 2 cut(s) 1298, 1472
PvuII CAGCTG 2 cut(s) 80, 767
RruI TCGCGA 1 cut(s) 1159
RsaI GTAC 2 cut(s) 528, 1292
RsaNI GTAC 2 cut(s) 527, 1291
RseI CAYNNNNRTG 1 cut(s) 950
SapI GCTCTTC 2 cut(s) 389, 636
SaqAI TTAA 5 cut(s) 468, 590, 774, 864, 999
SatI GCNGC 7 cut(s) 41, 122, 164, 243, 336, 912, 1249
Sau3AI GATC 4 cut(s) 68, 396, 1298, 1472
Sau96I GGNCC 2 cut(s) 1133, 1413
SchI GAGTC 4 cut(s) 333, 1001, 1163, 1592
ScrFI CCNGG 2 cut(s) 363, 1137
SduI GDGCHC 7 cut(s) 152, 384, 632, 732, 982, 1208, 1612
SfaNI GCATC 4 cut(s) 831, 898, 964, 1495
SfcI CTRYAG 3 cut(s) 41, 240, 684
SinI GGWCC 1 cut(s) 1133
SmiMI CAYNNNNRTG 1 cut(s) 950
SmlI CTYRAG 1 cut(s) 1480
SmoI CTYRAG 1 cut(s) 1480
Sse9I AATT 8 cut(s) 366, 592, 903, 1064, 1186, 1389, 1535, 1628
SseBI AGGCCT 1 cut(s) 1318
SsiI CCGC 3 cut(s) 121, 163, 1337
SspI AATATT 1 cut(s) 778
SspMI CTAG 4 cut(s) 798, 983, 1230, 1431
StuI AGGCCT 1 cut(s) 1318
StyD4I CCNGG 2 cut(s) 361, 1135
StyI CCWWGG 2 cut(s) 1224, 1493
TaaI ACNGT 4 cut(s) 200, 480, 502, 1133
TaiI ACGT 2 cut(s) 60, 1165
TaqI TCGA 3 cut(s) 71, 746, 1287
TaqII GACCGA 1 cut(s) 207
TasI AATT 8 cut(s) 366, 592, 903, 1064, 1186, 1389, 1535, 1628
TatI WGTACW 2 cut(s) 526, 1290
TauI GCSGC 2 cut(s) 124, 166
TfiI GAWTC 4 cut(s) 788, 1034, 1079, 1488
Tru1I TTAA 5 cut(s) 468, 590, 774, 864, 999
Tru9I TTAA 5 cut(s) 468, 590, 774, 864, 999
TscAI CASTG 3 cut(s) 91, 148, 885
TseFI GTSAC 1 cut(s) 619
TseI GCWGC 5 cut(s) 40, 242, 335, 911, 1248
Tsp45I GTSAC 1 cut(s) 619
TspDTI ATGAA 6 cut(s) 332, 729, 888, 1536, 1542, 1613
TspGWI ACGGA 1 cut(s) 1084
TspRI CASTG 3 cut(s) 91, 148, 885
VneI GTGCAC 3 cut(s) 728, 978, 1204
VpaK11BI GGWCC 1 cut(s) 1133
VspI ATTAAT 2 cut(s) 774, 864
XapI RAATTY 3 cut(s) 366, 1186, 1535
XceI RCATGY 1 cut(s) 1410
XcmI CCANNNNNNNNNTGG 1 cut(s) 295
XmiI GTMKAC 1 cut(s) 1165
XmnI GAANNNNTTC 1 cut(s) 1654
XspI CTAG 4 cut(s) 798, 983, 1230, 1431
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.