Nodulin-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g18450 |
| malus_domestica | MD01G1101200.v1.1 |
| prunus_persica | Prupe.2G206400_v2.0.a1 |
| pyrus_communis | pycom01g12780 |
| rosa_chinensis | RchiOBHm_Chr1g0362251 |
| rosa_laevigata | RLG00000027663 |
| rosa_multiflora | Rmu_sc0001237.1_g000013 Rmu_ssc0000009.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00294400 |
| rosa_rugosa | Rorug01G0296000 |
| rosa_samantha | Rh1AG305400 Rh1BG268400 Rh1CG286500 Rh1DG298500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 707 |
| Acc36I | ACCTGC | 2 cut(s) | 434, 1661 |
| Acc65I | GGTACC | 1 cut(s) | 1113 |
| AccB1I | GGYRCC | 3 cut(s) | 113, 1064, 1113 |
| AccII | CGCG | 2 cut(s) | 1768, 1813 |
| AciI | CCGC | 7 cut(s) | 952, 971, 1737, 1768, 1808, 1813, 1853 |
| AclWI | GGATC | 1 cut(s) | 620 |
| AcuI | CTGAAG | 2 cut(s) | 1302, 1505 |
| AcyI | GRCGYC | 1 cut(s) | 225 |
| AfaI | GTAC | 7 cut(s) | 371, 518, 1102, 1115, 1217, 1397, 1412 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 265, 354, 980 |
| AflIII | ACRYGT | 2 cut(s) | 123, 360 |
| AgsI | TTSAA | 7 cut(s) | 475, 935, 1291, 1546, 1570, 1604, 1724 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 151 |
| AhlI | ACTAGT | 1 cut(s) | 11 |
| AjnI | CCWGG | 3 cut(s) | 260, 1609, 1880 |
| Alw21I | GWGCWC | 3 cut(s) | 179, 418, 1348 |
| Alw26I | GTCTC | 3 cut(s) | 109, 881, 1310 |
| AlwI | GGATC | 1 cut(s) | 620 |
| Ama87I | CYCGRG | 2 cut(s) | 1731, 1817 |
| AoxI | GGCC | 8 cut(s) | 130, 235, 1054, 1171, 1223, 1352, 1387, 1922 |
| ApeKI | GCWGC | 8 cut(s) | 497, 689, 761, 1181, 1508, 1858, 1867, 1870 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 437 |
| Asp718I | GGTACC | 1 cut(s) | 1113 |
| AspLEI | GCGC | 2 cut(s) | 1813, 1858 |
| AspS9I | GGNCC | 2 cut(s) | 1171, 1922 |
| AsuC2I | CCSGG | 2 cut(s) | 443, 1911 |
| AsuHPI | GGTGA | 6 cut(s) | 545, 917, 985, 1039, 1789, 1834 |
| AsuNHI | GCTAGC | 2 cut(s) | 319, 1430 |
| AvaI | CYCGRG | 2 cut(s) | 1731, 1817 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 500, 533 |
| BanI | GGYRCC | 3 cut(s) | 113, 1064, 1113 |
| BanII | GRGCYC | 2 cut(s) | 418, 1732 |
| Bbv12I | GWGCWC | 3 cut(s) | 179, 418, 1348 |
| BbvI | GCAGC | 8 cut(s) | 509, 676, 773, 1168, 1520, 1845, 1857, 1879 |
| BccI | CCATC | 6 cut(s) | 63, 94, 284, 1018, 1072, 1660 |
| BceAI | ACGGC | 3 cut(s) | 435, 594, 992 |
| BciT130I | CCWGG | 3 cut(s) | 262, 1611, 1882 |
| BcnI | CCSGG | 2 cut(s) | 443, 1911 |
| BcoDI | GTCTC | 3 cut(s) | 109, 881, 1310 |
| BcuI | ACTAGT | 1 cut(s) | 11 |
| BfaI | CTAG | 8 cut(s) | 12, 320, 330, 464, 686, 870, 1431, 1704 |
| BfmI | CTRYAG | 2 cut(s) | 765, 1871 |
| BfoI | RGCGCY | 1 cut(s) | 1859 |
| BfuAI | ACCTGC | 2 cut(s) | 434, 1661 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1062 |
| BmcAI | AGTACT | 1 cut(s) | 1397 |
| Bme1390I | CCNGG | 5 cut(s) | 262, 443, 1611, 1882, 1911 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 151 |
| BmeT110I | CYCGRG | 2 cut(s) | 1731, 1817 |
| BmgT120I | GGNCC | 2 cut(s) | 1171, 1922 |
| BmiI | GGNNCC | 3 cut(s) | 115, 1066, 1115 |
| BmrFI | CCNGG | 5 cut(s) | 262, 443, 1611, 1882, 1911 |
| BmrI | ACTGGG | 3 cut(s) | 1338, 1479, 1904 |
| BmsI | GCATC | 2 cut(s) | 465, 1718 |
| BmtI | GCTAGC | 2 cut(s) | 323, 1434 |
| BmuI | ACTGGG | 3 cut(s) | 1338, 1479, 1904 |
| BpmI | CTGGAG | 1 cut(s) | 1903 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1616, 1642 |
| BpuEI | CTTGAG | 2 cut(s) | 632, 1376 |
| BpuMI | CCSGG | 2 cut(s) | 443, 1911 |
| BsaHI | GRCGYC | 1 cut(s) | 225 |
| BsaI | GGTCTC | 2 cut(s) | 109, 1310 |
| BsaJI | CCNNGG | 8 cut(s) | 160, 201, 260, 261, 451, 1057, 1609, 1610 |
| BsaWI | WCCGGW | 1 cut(s) | 410 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 405, 435, 841, 871 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 265, 354, 980 |
| Bse118I | RCCGGY | 1 cut(s) | 110 |
| Bse1I | ACTGG | 4 cut(s) | 490, 1333, 1474, 1899 |
| Bse3DI | GCAATG | 1 cut(s) | 1176 |
| BseBI | CCWGG | 3 cut(s) | 262, 1611, 1882 |
| BseDI | CCNNGG | 8 cut(s) | 160, 201, 260, 261, 451, 1057, 1609, 1610 |
| BseGI | GGATG | 1 cut(s) | 1697 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 265, 354, 980 |
| BseMI | GCAATG | 1 cut(s) | 1176 |
| BseMII | CTCAG | 3 cut(s) | 120, 876, 1209 |
| BseNI | ACTGG | 4 cut(s) | 490, 1333, 1474, 1899 |
| BseRI | GAGGAG | 2 cut(s) | 1768, 1795 |
| BseXI | GCAGC | 8 cut(s) | 509, 676, 773, 1168, 1520, 1845, 1857, 1879 |
| BseYI | CCCAGC | 1 cut(s) | 1919 |
| BsgI | GTGCAG | 4 cut(s) | 303, 516, 780, 1844 |
| Bsh1236I | CGCG | 2 cut(s) | 1768, 1813 |
| BshFI | GGCC | 8 cut(s) | 132, 237, 1056, 1173, 1225, 1354, 1389, 1924 |
| BshNI | GGYRCC | 3 cut(s) | 113, 1064, 1113 |
| BsiHKAI | GWGCWC | 3 cut(s) | 179, 418, 1348 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1731, 1817 |
| BsiSI | CCGG | 6 cut(s) | 111, 234, 411, 443, 974, 1911 |
| BslFI | GGGAC | 3 cut(s) | 1129, 1280, 1856 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 265, 354, 980 |
| BsmAI | GTCTC | 3 cut(s) | 109, 881, 1310 |
| BsmFI | GGGAC | 3 cut(s) | 1129, 1280, 1856 |
| BsmI | GAATGC | 1 cut(s) | 1286 |
| BsnI | GGCC | 8 cut(s) | 132, 237, 1056, 1173, 1225, 1354, 1389, 1924 |
| Bso31I | GGTCTC | 2 cut(s) | 109, 1310 |
| BsoBI | CYCGRG | 2 cut(s) | 1731, 1817 |
| Bsp1286I | GDGCHC | 4 cut(s) | 179, 418, 1348, 1732 |
| Bsp1407I | TGTACA | 2 cut(s) | 369, 1410 |
| Bsp143I | GATC | 3 cut(s) | 612, 839, 1359 |
| BspACI | CCGC | 7 cut(s) | 952, 971, 1737, 1768, 1808, 1813, 1853 |
| BspANI | GGCC | 8 cut(s) | 132, 237, 1056, 1173, 1225, 1354, 1389, 1924 |
| BspCNI | CTCAG | 3 cut(s) | 119, 877, 1208 |
| BspFNI | CGCG | 2 cut(s) | 1768, 1813 |
| BspHI | TCATGA | 2 cut(s) | 309, 615 |
| BspLI | GGNNCC | 3 cut(s) | 115, 1066, 1115 |
| BspMAI | CTGCAG | 1 cut(s) | 1875 |
| BspMI | ACCTGC | 2 cut(s) | 434, 1661 |
| BspOI | GCTAGC | 2 cut(s) | 323, 1434 |
| BspPI | GGATC | 1 cut(s) | 620 |
| BspQI | GCTCTTC | 3 cut(s) | 32, 470, 824 |
| BspT107I | GGYRCC | 3 cut(s) | 113, 1064, 1113 |
| BspTNI | GGTCTC | 2 cut(s) | 109, 1310 |
| BsrDI | GCAATG | 1 cut(s) | 1176 |
| BsrFI | RCCGGY | 1 cut(s) | 110 |
| BsrGI | TGTACA | 2 cut(s) | 369, 1410 |
| BsrI | ACTGG | 4 cut(s) | 490, 1333, 1474, 1899 |
| BssAI | RCCGGY | 1 cut(s) | 110 |
| BssECI | CCNNGG | 8 cut(s) | 160, 201, 260, 261, 451, 1057, 1609, 1610 |
| BssMI | GATC | 3 cut(s) | 612, 839, 1359 |
| BssNI | GRCGYC | 1 cut(s) | 225 |
| BssT1I | CCWWGG | 2 cut(s) | 201, 1057 |
| Bst2UI | CCWGG | 3 cut(s) | 262, 1611, 1882 |
| Bst4CI | ACNGT | 4 cut(s) | 799, 912, 1550, 1594 |
| Bst6I | CTCTTC | 5 cut(s) | 32, 470, 807, 824, 1533 |
| BstACI | GRCGYC | 1 cut(s) | 225 |
| BstAUI | TGTACA | 2 cut(s) | 369, 1410 |
| BstC8I | GCNNGC | 5 cut(s) | 118, 321, 1432, 1655, 1744 |
| BstDEI | CTNAG | 7 cut(s) | 106, 208, 885, 1195, 1494, 1616, 1642 |
| BstDSI | CCRYGG | 1 cut(s) | 451 |
| BstEII | GGTNACC | 1 cut(s) | 421 |
| BstF5I | GGATG | 1 cut(s) | 1697 |
| BstFNI | CGCG | 2 cut(s) | 1768, 1813 |
| BstH2I | RGCGCY | 1 cut(s) | 1859 |
| BstHHI | GCGC | 2 cut(s) | 1813, 1858 |
| BstKTI | GATC | 3 cut(s) | 615, 842, 1362 |
| BstMAI | GTCTC | 3 cut(s) | 109, 881, 1310 |
| BstMBI | GATC | 3 cut(s) | 612, 839, 1359 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 222, 506, 1062, 1743, 1864, 1867 |
| BstNI | CCWGG | 3 cut(s) | 262, 1611, 1882 |
| BstNSI | RCATGY | 3 cut(s) | 127, 364, 370 |
| BstPI | GGTNACC | 1 cut(s) | 421 |
| BstSCI | CCNGG | 5 cut(s) | 260, 441, 1609, 1880, 1909 |
| BstSFI | CTRYAG | 2 cut(s) | 765, 1871 |
| BstUI | CGCG | 2 cut(s) | 1768, 1813 |
| BstV1I | GCAGC | 8 cut(s) | 509, 676, 773, 1168, 1520, 1845, 1857, 1879 |
| BsuRI | GGCC | 8 cut(s) | 132, 237, 1056, 1173, 1225, 1354, 1389, 1924 |
| BtgI | CCRYGG | 1 cut(s) | 451 |
| BtsCI | GGATG | 1 cut(s) | 1697 |
| BtsI | GCAGTG | 1 cut(s) | 1722 |
| BtsIMutI | CAGTG | 3 cut(s) | 804, 1326, 1722 |
| BveI | ACCTGC | 2 cut(s) | 434, 1661 |
| Cac8I | GCNNGC | 5 cut(s) | 118, 321, 1432, 1655, 1744 |
| CciI | TCATGA | 2 cut(s) | 309, 615 |
| CfoI | GCGC | 2 cut(s) | 1813, 1858 |
| Cfr10I | RCCGGY | 1 cut(s) | 110 |
| Cfr13I | GGNCC | 2 cut(s) | 1171, 1922 |
| CseI | GACGC | 2 cut(s) | 214, 1774 |
| Csp6I | GTAC | 7 cut(s) | 370, 517, 1101, 1114, 1216, 1396, 1411 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1402, 1437 |
| CviQI | GTAC | 7 cut(s) | 370, 517, 1101, 1114, 1216, 1396, 1411 |
| DdeI | CTNAG | 7 cut(s) | 106, 208, 885, 1195, 1494, 1616, 1642 |
| DpnI | GATC | 3 cut(s) | 614, 841, 1361 |
| DpnII | GATC | 3 cut(s) | 612, 839, 1359 |
| DriI | GACNNNNNGTC | 1 cut(s) | 151 |
| Eam1104I | CTCTTC | 5 cut(s) | 32, 470, 807, 824, 1533 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 151 |
| EarI | CTCTTC | 5 cut(s) | 32, 470, 807, 824, 1533 |
| EciI | GGCGGA | 1 cut(s) | 967 |
| Ecl136II | GAGCTC | 1 cut(s) | 416 |
| Eco130I | CCWWGG | 2 cut(s) | 201, 1057 |
| Eco24I | GRGCYC | 2 cut(s) | 418, 1732 |
| Eco31I | GGTCTC | 2 cut(s) | 109, 1310 |
| Eco53kI | GAGCTC | 1 cut(s) | 416 |
| Eco57I | CTGAAG | 2 cut(s) | 1302, 1505 |
| Eco88I | CYCGRG | 2 cut(s) | 1731, 1817 |
| Eco91I | GGTNACC | 1 cut(s) | 421 |
| EcoICRI | GAGCTC | 1 cut(s) | 416 |
| EcoO65I | GGTNACC | 1 cut(s) | 421 |
| EcoRII | CCWGG | 3 cut(s) | 260, 1609, 1880 |
| EcoT14I | CCWWGG | 2 cut(s) | 201, 1057 |
| EcoT38I | GRGCYC | 2 cut(s) | 418, 1732 |
| ErhI | CCWWGG | 2 cut(s) | 201, 1057 |
| FaqI | GGGAC | 3 cut(s) | 1129, 1280, 1856 |
| FauI | CCCGC | 1 cut(s) | 978 |
| FauNDI | CATATG | 2 cut(s) | 1157, 1300 |
| FokI | GGATG | 1 cut(s) | 1704 |
| FriOI | GRGCYC | 2 cut(s) | 418, 1732 |
| FspBI | CTAG | 8 cut(s) | 12, 320, 330, 464, 686, 870, 1431, 1704 |
| GlaI | GCGC | 2 cut(s) | 1812, 1857 |
| GsaI | CCCAGC | 1 cut(s) | 1923 |
| GsuI | CTGGAG | 1 cut(s) | 1903 |
| HaeII | RGCGCY | 1 cut(s) | 1859 |
| HaeIII | GGCC | 8 cut(s) | 132, 237, 1056, 1173, 1225, 1354, 1389, 1924 |
| HapII | CCGG | 6 cut(s) | 111, 234, 411, 443, 974, 1911 |
| HgaI | GACGC | 2 cut(s) | 214, 1774 |
| HhaI | GCGC | 2 cut(s) | 1813, 1858 |
| Hin1I | GRCGYC | 1 cut(s) | 225 |
| Hin6I | GCGC | 2 cut(s) | 1811, 1856 |
| HinP1I | GCGC | 2 cut(s) | 1811, 1856 |
| HincII | GTYRAC | 1 cut(s) | 1907 |
| HindII | GTYRAC | 1 cut(s) | 1907 |
| HinfI | GANTC | 2 cut(s) | 1799, 1844 |
| HpaII | CCGG | 6 cut(s) | 111, 234, 411, 443, 974, 1911 |
| HphI | GGTGA | 6 cut(s) | 545, 917, 985, 1039, 1789, 1834 |
| Hpy166II | GTNNAC | 4 cut(s) | 31, 908, 1892, 1907 |
| Hpy188III | TCNNGA | 5 cut(s) | 58, 310, 616, 1623, 1689 |
| Hpy8I | GTNNAC | 4 cut(s) | 31, 908, 1892, 1907 |
| Hpy99I | CGWCG | 3 cut(s) | 580, 1408, 1768 |
| HpyAV | CCTTC | 3 cut(s) | 613, 1522, 1673 |
| HpyCH4III | ACNGT | 4 cut(s) | 799, 912, 1550, 1594 |
| HpyCH4IV | ACGT | 4 cut(s) | 726, 960, 1293, 1406 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 222, 506, 1062, 1743, 1864, 1867 |
| HpyF3I | CTNAG | 7 cut(s) | 106, 208, 885, 1195, 1494, 1616, 1642 |
| HpySE526I | ACGT | 4 cut(s) | 726, 960, 1293, 1406 |
| Hsp92I | GRCGYC | 1 cut(s) | 225 |
| HspAI | GCGC | 2 cut(s) | 1811, 1856 |
| KpnI | GGTACC | 1 cut(s) | 1117 |
| Kzo9I | GATC | 3 cut(s) | 612, 839, 1359 |
| LguI | GCTCTTC | 3 cut(s) | 32, 470, 824 |
| LmnI | GCTCC | 3 cut(s) | 5, 413, 862 |
| Lsp1109I | GCAGC | 8 cut(s) | 509, 676, 773, 1168, 1520, 1845, 1857, 1879 |
| LweI | GCATC | 2 cut(s) | 465, 1718 |
| MaeI | CTAG | 8 cut(s) | 12, 320, 330, 464, 686, 870, 1431, 1704 |
| MaeII | ACGT | 4 cut(s) | 726, 960, 1293, 1406 |
| MaeIII | GTNAC | 7 cut(s) | 250, 421, 533, 847, 1027, 1324, 1465 |
| MalI | GATC | 3 cut(s) | 614, 841, 1361 |
| MboI | GATC | 3 cut(s) | 612, 839, 1359 |
| MboII | GAAGA | 8 cut(s) | 49, 289, 445, 487, 824, 841, 1268, 1550 |
| MhlI | GDGCHC | 4 cut(s) | 179, 418, 1348, 1732 |
| MlyI | GAGTC | 2 cut(s) | 1793, 1838 |
| MmeI | TCCRAC | 4 cut(s) | 165, 599, 733, 884 |
| MroXI | GAANNNNTTC | 1 cut(s) | 437 |
| MseI | TTAA | 2 cut(s) | 735, 966 |
| MslI | CAYNNNNRTG | 4 cut(s) | 365, 371, 1073, 1592 |
| MspA1I | CMGCKG | 3 cut(s) | 500, 514, 1870 |
| MspI | CCGG | 6 cut(s) | 111, 234, 411, 443, 974, 1911 |
| MspR9I | CCNGG | 5 cut(s) | 262, 443, 1611, 1882, 1911 |
| Mva1269I | GAATGC | 1 cut(s) | 1286 |
| MvaI | CCWGG | 3 cut(s) | 262, 1611, 1882 |
| MvnI | CGCG | 2 cut(s) | 1768, 1813 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 222, 506, 1062, 1743, 1864, 1867 |
| NciI | CCSGG | 2 cut(s) | 443, 1911 |
| NdeI | CATATG | 2 cut(s) | 1157, 1300 |
| NdeII | GATC | 3 cut(s) | 612, 839, 1359 |
| NheI | GCTAGC | 2 cut(s) | 319, 1430 |
| NlaIV | GGNNCC | 3 cut(s) | 115, 1066, 1115 |
| NmeAIII | GCCGAG | 1 cut(s) | 141 |
| NmuCI | GTSAC | 3 cut(s) | 250, 533, 1027 |
| NspI | RCATGY | 3 cut(s) | 127, 364, 370 |
| PagI | TCATGA | 2 cut(s) | 309, 615 |
| PasI | CCCWGGG | 2 cut(s) | 261, 1610 |
| PciI | ACATGT | 2 cut(s) | 123, 360 |
| PciSI | GCTCTTC | 3 cut(s) | 32, 470, 824 |
| PctI | GAATGC | 1 cut(s) | 1286 |
| PdmI | GAANNNNTTC | 1 cut(s) | 437 |
| PfoI | TCCNGGA | 2 cut(s) | 441, 1880 |
| PleI | GAGTC | 2 cut(s) | 1793, 1838 |
| PpsI | GAGTC | 2 cut(s) | 1793, 1838 |
| PscI | ACATGT | 2 cut(s) | 123, 360 |
| PsiI | TTATAA | 1 cut(s) | 707 |
| Psp124BI | GAGCTC | 1 cut(s) | 418 |
| Psp6I | CCWGG | 3 cut(s) | 260, 1609, 1880 |
| PspEI | GGTNACC | 1 cut(s) | 421 |
| PspFI | CCCAGC | 1 cut(s) | 1919 |
| PspGI | CCWGG | 3 cut(s) | 260, 1609, 1880 |
| PspN4I | GGNNCC | 3 cut(s) | 115, 1066, 1115 |
| PspPI | GGNCC | 2 cut(s) | 1171, 1922 |
| PstI | CTGCAG | 1 cut(s) | 1875 |
| PvuII | CAGCTG | 3 cut(s) | 500, 514, 1870 |
| RsaI | GTAC | 7 cut(s) | 371, 518, 1102, 1115, 1217, 1397, 1412 |
| RsaNI | GTAC | 7 cut(s) | 370, 517, 1101, 1114, 1216, 1396, 1411 |
| RseI | CAYNNNNRTG | 4 cut(s) | 365, 371, 1073, 1592 |
| SacI | GAGCTC | 1 cut(s) | 418 |
| SapI | GCTCTTC | 3 cut(s) | 32, 470, 824 |
| SaqAI | TTAA | 2 cut(s) | 735, 966 |
| Sau3AI | GATC | 3 cut(s) | 612, 839, 1359 |
| Sau96I | GGNCC | 2 cut(s) | 1171, 1922 |
| ScaI | AGTACT | 1 cut(s) | 1397 |
| SchI | GAGTC | 2 cut(s) | 1793, 1838 |
| ScrFI | CCNGG | 5 cut(s) | 262, 443, 1611, 1882, 1911 |
| SduI | GDGCHC | 4 cut(s) | 179, 418, 1348, 1732 |
| SfaNI | GCATC | 2 cut(s) | 465, 1718 |
| SfcI | CTRYAG | 2 cut(s) | 765, 1871 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 365, 371, 1073, 1592 |
| SmlI | CTYRAG | 2 cut(s) | 647, 1391 |
| SmoI | CTYRAG | 2 cut(s) | 647, 1391 |
| SpeI | ACTAGT | 1 cut(s) | 11 |
| SsiI | CCGC | 7 cut(s) | 952, 971, 1737, 1768, 1808, 1813, 1853 |
| SspI | AATATT | 2 cut(s) | 1203, 1417 |
| SspMI | CTAG | 8 cut(s) | 12, 320, 330, 464, 686, 870, 1431, 1704 |
| SstI | GAGCTC | 1 cut(s) | 418 |
| StyD4I | CCNGG | 5 cut(s) | 260, 441, 1609, 1880, 1909 |
| StyI | CCWWGG | 2 cut(s) | 201, 1057 |
| TaaI | ACNGT | 4 cut(s) | 799, 912, 1550, 1594 |
| TaiI | ACGT | 4 cut(s) | 729, 963, 1296, 1409 |
| TaqI | TCGA | 2 cut(s) | 1403, 1622 |
| TatI | WGTACW | 4 cut(s) | 369, 1215, 1395, 1410 |
| TauI | GCSGC | 4 cut(s) | 1771, 1811, 1816, 1856 |
| Tru1I | TTAA | 2 cut(s) | 735, 966 |
| Tru9I | TTAA | 2 cut(s) | 735, 966 |
| TscAI | CASTG | 3 cut(s) | 804, 1326, 1722 |
| TseFI | GTSAC | 3 cut(s) | 250, 533, 1027 |
| TseI | GCWGC | 8 cut(s) | 497, 689, 761, 1181, 1508, 1858, 1867, 1870 |
| Tsp45I | GTSAC | 3 cut(s) | 250, 533, 1027 |
| TspDTI | ATGAA | 6 cut(s) | 50, 78, 298, 586, 632, 1570 |
| TspGWI | ACGGA | 1 cut(s) | 145 |
| TspRI | CASTG | 3 cut(s) | 804, 1326, 1722 |
| XceI | RCATGY | 3 cut(s) | 127, 364, 370 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 527, 1075, 1181 |
| XmnI | GAANNNNTTC | 1 cut(s) | 437 |
| XspI | CTAG | 8 cut(s) | 12, 320, 330, 464, 686, 870, 1431, 1704 |
| ZrmI | AGTACT | 1 cut(s) | 1397 |