Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001275.1

Orthogroup ID

OG0005140

Physical Location & Seq

Genomic Coordinates Reverse (-)

4275 .. 8991

Gene Structure 4717 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1587 bp

atgtggttcagaaaaatatggaatgtggatggtgggaatattgttggatgctcaaggttgatgagaagatacacatcagcctcaagcagacgtgtattagacatggctgctaaagatggggagctgagggtcttcatagtttctggagaggtttctggcgacaccattggctttcgtctgatggcatctctaaagaagctctctcctgttccagtccgcttttctggcgttggagggactatgatgtccaatcaaggattaaaatctgtatttcctatggaggatattgcagtgatgggattgttggagttattgcctcatctaaataaactcagactgaagttgcaggagacattagaagctgctcttctgtttcaacctcatgttgttgtaacagtggattccaagggattctctttccgtcttctaaagcagttacgggctagatacaatcaaaaaagcttcgagattccagtacacttccattatgtagcaccatcattctgggcttggaaagggggtgaagcaagactcagaggcttagctggatttgtggatcatattctgtgtatacttccgaatgaagaagaagtttgcagatcaaatggattggttgcaacctttgttggccaccctattctagaggatgtgtgggagttgaatttggatactttaccacatgaatggaaaatagaaggaaactcagaaattttcagaagaaatcatgcaatacctgcaggagccccaatcatttccttgcttcctggaagcagattacaggaggtcaccagaatgctttctctctttgcaaataccatcgaactattaaaagtctcctttcctgagttggtaccagtgatccatgtcgctacaaatcagcatgtgaaggactatgtcactagatttaccaacaagtggcctgtgcctgctatattgattccaggaggacctctgcaccagaaatatgatgcattcagcgcaagtagtgttgcattatgtgcttctggaacagttgctttggagttgcagcttgcacggctaccgtgtgtagttgcttatcgagctcatttcctaactgagtggattattcgctataaagccaagatatcttacatctccctcccaaatatcttgttggattcagctatcatacctgaagcactgtttcaagtatgcactccagcaaagctagcctcattaacatcgaaattgatacatgacgatggcctccgagaaaaacaaattgttgctgctgaaaaggttacccgacttctgtgtgcttcacctggaaacttagataacttggaagagccgcatcaaagatggaggtttccccattacacaccgattactctcttcatcagcctgtgctgtatcaaagtcaccgaggctcacaccgaaggctgtgaccataatgagccaaacaaaggtgaccaatgccgtgaagatgccagtgatgaatttgcggatcacgatgtcgatgacacatacaagattgtgaacaaggttgcagtgactttcacgcaaagaaatgaagcaccaggtcaaattgatgagcaaaatcatgtggtcgtactgggacactga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0005975 GO:0006040 GO:0006629 GO:0006643 GO:0006644 GO:0006664 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0008194 GO:0008289 GO:0008610 GO:0008654 GO:0008915 GO:0009058 GO:0009245 GO:0009247 GO:0009311 GO:0009312 GO:0009987 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0019637 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0046467 GO:0046493 GO:0071704 GO:0090407 GO:1901135 GO:1901137 GO:1901269 GO:1901271 GO:1901576 GO:1903509 GO:2001289

KEGG Pathways

Metabolic & Signaling

ko00540 ko01100 map00540 map01100

Pfam Domains

Protein Families

LpxB

Protein Analysis

528

Amino Acids

59.12

Weight (kDa)

7.05

Isoelectric Point (pI)

40.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LpxB	PF02684	44 - 424	5.7e-75	Lipid-A-disaccharide synthetase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005140)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G04560
fragaria_vesca	FvH4_6g41870 FvH4_6g41870 FvH4_6g41870 FvH4_6g41870 FvH4_6g41870 FvH4_6g41870
malus_domestica	MD09G1116800.v1.1
prunus_persica	Prupe.3G208000_v2.0.a1 Prupe.3G208000_v2.0.a1 Prupe.3G208000_v2.0.a1 Prupe.3G208000_v2.0.a1 Prupe.3G208000_v2.0.a1
pyrus_communis	pycom09g04140 pycom17g10060
rosa_chinensis	RchiOBHm_Chr2g0157701 RchiOBHm_Chr2g0157711
rosa_laevigata	RLG00000021009
rosa_multiflora	Rmu_sc0001275.1_g000003
rosa_roxburghii	Rroxscaffold_2G00092020
rosa_rugosa	Rorug02G0462900
rosa_samantha	Rh2AG527200 Rh2AG527300 Rh2BG542000 Rh2BG542100 Rh2CG511700 Rh2CG511800 Rh2DG550600 Rh2DG550700
rosa_wichuraiana	Rw2G043660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	244
Acc36I	ACCTGC	1 cut(s)	742
Acc65I	GGTACC	1 cut(s)	850
AccB1I	GGYRCC	1 cut(s)	850
AccB7I	CCANNNNNTGG	1 cut(s)	915
AccI	GTMKAC	1 cut(s)	571
AciI	CCGC	3 cut(s)	217, 1313, 1466
AclWI	GGATC	3 cut(s)	564, 853, 1476
AcoI	YGGCCR	1 cut(s)	628
AcsI	RAATTY	3 cut(s)	661, 708, 1460
AcuI	CTGAAG	2 cut(s)	359, 1176
AfaI	GTAC	3 cut(s)	477, 852, 1575
AfiI	CCNNNNNNNGG	2 cut(s)	915, 1427
AflIII	ACRYGT	1 cut(s)	91
AgsI	TTSAA	3 cut(s)	377, 661, 1169
AjiI	CACGTC	1 cut(s)	92
AjnI	CCWGG	4 cut(s)	763, 940, 1285, 1540
AluBI	AGCT	9 cut(s)	124, 199, 362, 462, 545, 1030, 1064, 1145, 1189
AluI	AGCT	9 cut(s)	124, 199, 362, 462, 545, 1030, 1064, 1145, 1189
Alw21I	GWGCWC	1 cut(s)	1066
Alw26I	GTCTC	2 cut(s)	344, 838
AlwI	GGATC	3 cut(s)	564, 853, 1476
AoxI	GGCC	3 cut(s)	628, 917, 1225
ApeKI	GCWGC	4 cut(s)	107, 362, 1027, 1250
ApoI	RAATTY	3 cut(s)	661, 708, 1460
Asp700I	GAANNNNTTC	1 cut(s)	796
Asp718I	GGTACC	1 cut(s)	850
AspLEI	GCGC	1 cut(s)	980
AspS9I	GGNCC	1 cut(s)	947
AsuHPI	GGTGA	5 cut(s)	533, 778, 1275, 1375, 1442
AsuNHI	GCTAGC	1 cut(s)	1189
AvaII	GGWCC	1 cut(s)	947
BalI	TGGCCA	1 cut(s)	630
BanI	GGYRCC	1 cut(s)	850
BanII	GRGCYC	2 cut(s)	745, 1066
BbsI	GAAGAC	2 cut(s)	124, 416
Bbv12I	GWGCWC	1 cut(s)	1066
BbvCI	CCTCAGC	1 cut(s)	125
BbvI	GCAGC	4 cut(s)	94, 349, 1039, 1237
BccI	CCATC	8 cut(s)	23, 110, 175, 289, 505, 824, 1217, 1317
BceAI	ACGGC	2 cut(s)	1052, 1425
BciT130I	CCWGG	4 cut(s)	765, 942, 1287, 1542
BciVI	GTATCC	1 cut(s)	661
BcoDI	GTCTC	2 cut(s)	344, 838
BfaI	CTAG	4 cut(s)	444, 641, 900, 1190
BfmI	CTRYAG	1 cut(s)	735
BfuAI	ACCTGC	1 cut(s)	742
BfuI	GTATCC	1 cut(s)	661
BisI	GCNGC	5 cut(s)	108, 363, 1028, 1251, 1313
BlpI	GCTNAGC	1 cut(s)	541
BlsI	GCNGC	5 cut(s)	109, 364, 1029, 1252, 1314
Bme1390I	CCNGG	4 cut(s)	765, 942, 1287, 1542
Bme18I	GGWCC	1 cut(s)	947
BmgBI	CACGTC	1 cut(s)	92
BmgT120I	GGNCC	1 cut(s)	947
BmiI	GGNNCC	2 cut(s)	742, 852
BmrFI	CCNGG	4 cut(s)	765, 942, 1287, 1542
BmrI	ACTGGG	1 cut(s)	1586
BmsI	GCATC	5 cut(s)	38, 194, 958, 1324, 1438
BmtI	GCTAGC	1 cut(s)	1193
BmuI	ACTGGG	1 cut(s)	1586
BpiI	GAAGAC	2 cut(s)	124, 416
BpmI	CTGGAG	2 cut(s)	165, 1164
Bpu10I	CCTNAGC	1 cut(s)	125
Bpu1102I	GCTNAGC	1 cut(s)	541
BpuEI	CTTGAG	2 cut(s)	37, 67
BsaBI	GATNNNNATC	2 cut(s)	73, 262
BsaJI	CCNNGG	2 cut(s)	405, 1386
Bsc4I	CCNNNNNNNGG	2 cut(s)	915, 1427
Bse1I	ACTGG	5 cut(s)	212, 473, 854, 1452, 1581
Bse8I	GATNNNNATC	2 cut(s)	73, 262
BseBI	CCWGG	4 cut(s)	765, 942, 1287, 1542
BseDI	CCNNGG	2 cut(s)	405, 1386
BseGI	GGATG	3 cut(s)	34, 53, 652
BseJI	GATNNNNATC	2 cut(s)	73, 262
BseLI	CCNNNNNNNGG	2 cut(s)	915, 1427
BseMII	CTCAG	6 cut(s)	116, 346, 547, 717, 834, 1068
BseNI	ACTGG	5 cut(s)	212, 473, 854, 1452, 1581
BseXI	GCAGC	4 cut(s)	94, 349, 1039, 1237
BsgI	GTGCAG	1 cut(s)	938
BshFI	GGCC	3 cut(s)	630, 919, 1227
BshNI	GGYRCC	1 cut(s)	850
BsiHKAI	GWGCWC	1 cut(s)	1066
BslFI	GGGAC	1 cut(s)	250
BslI	CCNNNNNNNGG	2 cut(s)	915, 1427
BsmAI	GTCTC	2 cut(s)	344, 838
BsmFI	GGGAC	1 cut(s)	250
BsmI	GAATGC	2 cut(s)	798, 971
BsnI	GGCC	3 cut(s)	630, 919, 1227
Bsp1286I	GDGCHC	2 cut(s)	745, 1066
Bsp143I	GATC	4 cut(s)	556, 599, 858, 1468
Bsp1720I	GCTNAGC	1 cut(s)	541
BspACI	CCGC	3 cut(s)	217, 1313, 1466
BspANI	GGCC	3 cut(s)	630, 919, 1227
BspCNI	CTCAG	6 cut(s)	117, 345, 546, 716, 835, 1069
BspLI	GGNNCC	2 cut(s)	742, 852
BspMAI	CTGCAG	1 cut(s)	739
BspMI	ACCTGC	1 cut(s)	742
BspOI	GCTAGC	1 cut(s)	1193
BspPI	GGATC	3 cut(s)	564, 853, 1476
BspQI	GCTCTTC	2 cut(s)	372, 1302
BspT107I	GGYRCC	1 cut(s)	850
BsrI	ACTGG	5 cut(s)	212, 473, 854, 1452, 1581
BssECI	CCNNGG	2 cut(s)	405, 1386
BssMI	GATC	4 cut(s)	556, 599, 858, 1468
BssNAI	GTATAC	1 cut(s)	572
BssT1I	CCWWGG	1 cut(s)	405
Bst1107I	GTATAC	1 cut(s)	572
Bst2UI	CCWGG	4 cut(s)	765, 942, 1287, 1542
Bst4CI	ACNGT	4 cut(s)	397, 1012, 1044, 1164
Bst6I	CTCTTC	3 cut(s)	372, 1302, 1361
BstAPI	GCANNNNNTGC	2 cut(s)	734, 998
BstC8I	GCNNGC	3 cut(s)	927, 1032, 1191
BstDEI	CTNAG	8 cut(s)	125, 332, 533, 541, 703, 843, 1077, 1294
BstEII	GGTNACC	3 cut(s)	784, 1261, 1430
BstF5I	GGATG	3 cut(s)	34, 53, 652
BstHHI	GCGC	1 cut(s)	980
BstKTI	GATC	4 cut(s)	559, 602, 861, 1471
BstMAI	GTCTC	2 cut(s)	344, 838
BstMBI	GATC	4 cut(s)	556, 599, 858, 1468
BstMWI	GCNNNNNNNGC	7 cut(s)	225, 734, 977, 998, 1036, 1061, 1190
BstNI	CCWGG	4 cut(s)	765, 942, 1287, 1542
BstNSI	RCATGY	1 cut(s)	884
BstPI	GGTNACC	3 cut(s)	784, 1261, 1430
BstSCI	CCNGG	4 cut(s)	763, 940, 1285, 1540
BstSFI	CTRYAG	1 cut(s)	735
BstV1I	GCAGC	4 cut(s)	94, 349, 1039, 1237
BstV2I	GAAGAC	2 cut(s)	124, 416
BstXI	CCANNNNNNTGG	2 cut(s)	504, 684
BstZ17I	GTATAC	1 cut(s)	572
BsuI	GTATCC	1 cut(s)	661
BsuRI	GGCC	3 cut(s)	630, 919, 1227
BtrI	CACGTC	1 cut(s)	92
BtsCI	GGATG	3 cut(s)	34, 53, 652
BtsI	GCAGTG	2 cut(s)	297, 1518
BtsIMutI	CAGTG	7 cut(s)	297, 402, 861, 1160, 1459, 1518, 1582
BveI	ACCTGC	1 cut(s)	742
Cac8I	GCNNGC	3 cut(s)	927, 1032, 1191
CfoI	GCGC	1 cut(s)	980
Cfr13I	GGNCC	1 cut(s)	947
CsiI	ACCWGGT	1 cut(s)	1540
Csp6I	GTAC	3 cut(s)	476, 851, 1574
CviAII	CATG	8 cut(s)	103, 383, 680, 725, 863, 881, 1217, 1565
CviQI	GTAC	3 cut(s)	476, 851, 1574
DdeI	CTNAG	8 cut(s)	125, 332, 533, 541, 703, 843, 1077, 1294
DpnI	GATC	4 cut(s)	558, 601, 860, 1470
DpnII	GATC	4 cut(s)	556, 599, 858, 1468
DrdI	GACNNNNNNGTC	1 cut(s)	244
DseDI	GACNNNNNNGTC	1 cut(s)	244
EaeI	YGGCCR	1 cut(s)	628
Eam1104I	CTCTTC	3 cut(s)	372, 1302, 1361
EarI	CTCTTC	3 cut(s)	372, 1302, 1361
Ecl136II	GAGCTC	1 cut(s)	1064
Eco130I	CCWWGG	1 cut(s)	405
Eco24I	GRGCYC	2 cut(s)	745, 1066
Eco32I	GATATC	1 cut(s)	1107
Eco47I	GGWCC	1 cut(s)	947
Eco53kI	GAGCTC	1 cut(s)	1064
Eco57I	CTGAAG	2 cut(s)	359, 1176
Eco91I	GGTNACC	3 cut(s)	784, 1261, 1430
EcoICRI	GAGCTC	1 cut(s)	1064
EcoO109I	RGGNCCY	1 cut(s)	947
EcoO65I	GGTNACC	3 cut(s)	784, 1261, 1430
EcoRII	CCWGG	4 cut(s)	763, 940, 1285, 1540
EcoRV	GATATC	1 cut(s)	1107
EcoT14I	CCWWGG	1 cut(s)	405
EcoT22I	ATGCAT	1 cut(s)	973
EcoT38I	GRGCYC	2 cut(s)	745, 1066
ErhI	CCWWGG	1 cut(s)	405
FaeI	CATG	8 cut(s)	106, 386, 683, 728, 866, 884, 1220, 1568
FalI	AAGNNNNNCTT	2 cut(s)	351, 383
FaqI	GGGAC	1 cut(s)	250
FatI	CATG	8 cut(s)	102, 382, 679, 724, 862, 880, 1216, 1564
FblI	GTMKAC	1 cut(s)	571
Fnu4HI	GCNGC	5 cut(s)	108, 363, 1028, 1251, 1313
FokI	GGATG	3 cut(s)	41, 60, 659
FriOI	GRGCYC	2 cut(s)	745, 1066
Fsp4HI	GCNGC	5 cut(s)	108, 363, 1028, 1251, 1313
FspBI	CTAG	4 cut(s)	444, 641, 900, 1190
GlaI	GCGC	1 cut(s)	979
GluI	GCNGC	5 cut(s)	108, 363, 1028, 1251, 1313
GsuI	CTGGAG	2 cut(s)	165, 1164
HaeIII	GGCC	3 cut(s)	630, 919, 1227
HhaI	GCGC	1 cut(s)	980
Hin1II	CATG	8 cut(s)	106, 386, 683, 728, 866, 884, 1220, 1568
Hin6I	GCGC	1 cut(s)	978
HinP1I	GCGC	1 cut(s)	978
HindIII	AAGCTT	1 cut(s)	460
HinfI	GANTC	6 cut(s)	401, 411, 469, 531, 937, 1139
HphI	GGTGA	5 cut(s)	533, 778, 1275, 1375, 1442
Hpy166II	GTNNAC	3 cut(s)	478, 572, 1501
Hpy188I	TCNGA	8 cut(s)	11, 180, 335, 536, 579, 706, 716, 1232
Hpy188III	TCNNGA	6 cut(s)	144, 466, 641, 842, 1005, 1472
Hpy8I	GTNNAC	3 cut(s)	478, 572, 1501
HpyAV	CCTTC	3 cut(s)	689, 880, 1394
HpyCH4III	ACNGT	4 cut(s)	397, 1012, 1044, 1164
HpyCH4IV	ACGT	1 cut(s)	91
HpyF10VI	GCNNNNNNNGC	7 cut(s)	225, 734, 977, 998, 1036, 1061, 1190
HpyF3I	CTNAG	8 cut(s)	125, 332, 533, 541, 703, 843, 1077, 1294
HpySE526I	ACGT	1 cut(s)	91
Hsp92II	CATG	8 cut(s)	106, 386, 683, 728, 866, 884, 1220, 1568
HspAI	GCGC	1 cut(s)	978
KpnI	GGTACC	1 cut(s)	854
Kzo9I	GATC	4 cut(s)	556, 599, 858, 1468
LguI	GCTCTTC	2 cut(s)	372, 1302
LmnI	GCTCC	2 cut(s)	121, 740
Lsp1109I	GCAGC	4 cut(s)	94, 349, 1039, 1237
LweI	GCATC	5 cut(s)	38, 194, 958, 1324, 1438
MabI	ACCWGGT	1 cut(s)	1540
MaeI	CTAG	4 cut(s)	444, 641, 900, 1190
MaeII	ACGT	1 cut(s)	91
MaeIII	GTNAC	9 cut(s)	391, 435, 784, 895, 1261, 1381, 1406, 1430, 1513
MalI	GATC	4 cut(s)	558, 601, 860, 1470
MboI	GATC	4 cut(s)	556, 599, 858, 1468
MhlI	GDGCHC	2 cut(s)	745, 1066
MlsI	TGGCCA	1 cut(s)	630
MluCI	AATT	6 cut(s)	661, 708, 1208, 1242, 1460, 1548
MluNI	TGGCCA	1 cut(s)	630
MlyI	GAGTC	1 cut(s)	525
MmeI	TCCRAC	4 cut(s)	25, 211, 285, 1116
Mox20I	TGGCCA	1 cut(s)	630
Mph1103I	ATGCAT	1 cut(s)	973
MroXI	GAANNNNTTC	1 cut(s)	796
MscI	TGGCCA	1 cut(s)	630
MseI	TTAA	3 cut(s)	260, 827, 1199
MslI	CAYNNNNRTG	3 cut(s)	682, 791, 1221
Msp20I	TGGCCA	1 cut(s)	630
MspR9I	CCNGG	4 cut(s)	765, 942, 1287, 1542
Mva1269I	GAATGC	2 cut(s)	798, 971
MvaI	CCWGG	4 cut(s)	765, 942, 1287, 1542
MwoI	GCNNNNNNNGC	7 cut(s)	225, 734, 977, 998, 1036, 1061, 1190
NdeII	GATC	4 cut(s)	556, 599, 858, 1468
NheI	GCTAGC	1 cut(s)	1189
NlaIII	CATG	8 cut(s)	106, 386, 683, 728, 866, 884, 1220, 1568
NlaIV	GGNNCC	2 cut(s)	742, 852
NmuCI	GTSAC	6 cut(s)	784, 895, 1381, 1406, 1430, 1513
NsiI	ATGCAT	1 cut(s)	973
NspI	RCATGY	1 cut(s)	884
PciSI	GCTCTTC	2 cut(s)	372, 1302
PctI	GAATGC	2 cut(s)	798, 971
PdmI	GAANNNNTTC	1 cut(s)	796
PfeI	GAWTC	5 cut(s)	401, 411, 469, 937, 1139
PflFI	GACNNNGTC	1 cut(s)	893
PflMI	CCANNNNNTGG	1 cut(s)	915
PfoI	TCCNGGA	2 cut(s)	763, 940
PkrI	GCNGC	5 cut(s)	109, 364, 1029, 1252, 1314
PleI	GAGTC	1 cut(s)	525
PpsI	GAGTC	1 cut(s)	525
PpuMI	RGGWCCY	1 cut(s)	947
Psp124BI	GAGCTC	1 cut(s)	1066
Psp5II	RGGWCCY	1 cut(s)	947
Psp6I	CCWGG	4 cut(s)	763, 940, 1285, 1540
PspEI	GGTNACC	3 cut(s)	784, 1261, 1430
PspGI	CCWGG	4 cut(s)	763, 940, 1285, 1540
PspN4I	GGNNCC	2 cut(s)	742, 852
PspPI	GGNCC	1 cut(s)	947
PspPPI	RGGWCCY	1 cut(s)	947
PstI	CTGCAG	1 cut(s)	739
PsyI	GACNNNGTC	1 cut(s)	893
RsaI	GTAC	3 cut(s)	477, 852, 1575
RsaNI	GTAC	3 cut(s)	476, 851, 1574
RseI	CAYNNNNRTG	3 cut(s)	682, 791, 1221
SacI	GAGCTC	1 cut(s)	1066
SapI	GCTCTTC	2 cut(s)	372, 1302
SaqAI	TTAA	3 cut(s)	260, 827, 1199
SatI	GCNGC	5 cut(s)	108, 363, 1028, 1251, 1313
Sau3AI	GATC	4 cut(s)	556, 599, 858, 1468
Sau96I	GGNCC	1 cut(s)	947
SbfI	CCTGCAGG	1 cut(s)	739
SchI	GAGTC	1 cut(s)	525
ScrFI	CCNGG	4 cut(s)	765, 942, 1287, 1542
SdaI	CCTGCAGG	1 cut(s)	739
SduI	GDGCHC	2 cut(s)	745, 1066
SexAI	ACCWGGT	1 cut(s)	1540
SfaNI	GCATC	5 cut(s)	38, 194, 958, 1324, 1438
SfcI	CTRYAG	1 cut(s)	735
SinI	GGWCC	1 cut(s)	947
SmiMI	CAYNNNNRTG	3 cut(s)	682, 791, 1221
SmlI	CTYRAG	2 cut(s)	52, 82
SmoI	CTYRAG	2 cut(s)	52, 82
Sse8387I	CCTGCAGG	1 cut(s)	739
Sse9I	AATT	6 cut(s)	661, 708, 1208, 1242, 1460, 1548
SsiI	CCGC	3 cut(s)	217, 1313, 1466
SspI	AATATT	1 cut(s)	40
SspMI	CTAG	4 cut(s)	444, 641, 900, 1190
SstI	GAGCTC	1 cut(s)	1066
StyD4I	CCNGG	4 cut(s)	763, 940, 1285, 1540
StyI	CCWWGG	1 cut(s)	405
TaaI	ACNGT	4 cut(s)	397, 1012, 1044, 1164
TaiI	ACGT	1 cut(s)	94
TaqI	TCGA	5 cut(s)	465, 819, 1060, 1205, 1479
TasI	AATT	6 cut(s)	661, 708, 1208, 1242, 1460, 1548
TatI	WGTACW	1 cut(s)	475
TauI	GCSGC	1 cut(s)	1315
TfiI	GAWTC	5 cut(s)	401, 411, 469, 937, 1139
Tru1I	TTAA	3 cut(s)	260, 827, 1199
Tru9I	TTAA	3 cut(s)	260, 827, 1199
TscAI	CASTG	6 cut(s)	297, 402, 861, 1167, 1459, 1518
TseFI	GTSAC	6 cut(s)	784, 895, 1381, 1406, 1430, 1513
TseI	GCWGC	4 cut(s)	107, 362, 1027, 1250
Tsp45I	GTSAC	6 cut(s)	784, 895, 1381, 1406, 1430, 1513
TspDTI	ATGAA	6 cut(s)	124, 597, 696, 1348, 1473, 1548
TspGWI	ACGGA	1 cut(s)	410
TspRI	CASTG	6 cut(s)	297, 402, 861, 1167, 1459, 1518
Tth111I	GACNNNGTC	1 cut(s)	893
Van91I	CCANNNNNTGG	1 cut(s)	915
VpaK11BI	GGWCC	1 cut(s)	947
XapI	RAATTY	3 cut(s)	661, 708, 1460
XbaI	TCTAGA	1 cut(s)	640
XceI	RCATGY	1 cut(s)	884
XmiI	GTMKAC	1 cut(s)	571
XmnI	GAANNNNTTC	1 cut(s)	796
XspI	CTAG	4 cut(s)	444, 641, 900, 1190
Zsp2I	ATGCAT	1 cut(s)	973

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.