Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001299.1

Orthogroup ID

OG0004241

Physical Location & Seq

Genomic Coordinates Reverse (-)

114318 .. 120024

Gene Structure 5707 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001299.1_g000020.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2784 bp

atggacgggtcaccggaaacgaatcgggttgccgccgccgccgcctcatcgccggcccaagcctcgtctccggctgtgcaagtaactattcggttcttaatatctaagtgtgctgtaaacgccgtcgttttggagtcgcctttctccaatttccttagcaatctcactcctatcaatacagtgaagagtgatagttattcacaaagattagtaggagccttcttcccaacgccaccagttgtctttacatctccccatattgatctggagcgcgaaaccagtttcttggaaaggaatgatatagttgaagcaggttataaagaatgtaatacaactatattccagaaccctagttttgagaaggaggtccagttgtgcagtgcatcagggtgtattgatgaatatttggctgaccctgcgaaggtagactgtacaggttctgctgatatacagagcagtatcaatgccggcaaagaatccaatacggaagttcatgaggttattgatggtagtacaaagagtgaaccccttccaacattgaatcaagctgaagtgggtctgcctttaccttcactgacacagattgaaaccacaatcattgagaaggttgataaaaatagtgtagatcttgtcacccgagcacaaagccgtggacagaatacagctaaggagtcgcctttctccaatttccttagcaatctcactcctatcaatacagtgaagagtgatagttattcacaaagattagtaggagccttcttcccaacgccaccagttgtctttacatctccccatattgatctggagcgcgaaaccagtttcttggaaaggaatgatatagttgaagcaggttataaagaatgtaatacaactatattccagaaccctagttttgagaaggaggtccagttgtgcagtgcatcagggtgtattgatgaatatttggctgaccctgcgaaggtagactgtacaggttctgctgatatacagagcagtatcaatgccggcaaagaatccaatacggaagttcatgaggttattgatggtagtacaaagagtgaaccccttccaacattgaatcaagctgaagtgggtctgcctttaccttcactgacacagattgaaaccacaatcattgagaaggttgataaaaatagtgtagatcttgtcacccgagcacaaagccgtggacagaatacagctaaggaggttagtcaacaccaccgtggtatacgtaggcatctccaatttgagactgcagtagcccagaagagttctaactttggtaaccatcgaagtctttgcagtctgacgcatgatactgacaatttaaggtcacaatccaaactaacaaacttgaagactctagcttcttctcatttagatagcaaagccttcagcagtccgcagggtgttagctgtgacacttcacaattgtcttcttgcctctgtgagtcagttagatccagccaaattggtggaaactcttccacctcagctcctattcgttctggtattggtttacatctgaatagcattactcgatctacatccatgagctcagatgtattgctaagcaggaaagcaactggttgtctgagtacaccggaccagatgttggagcatgacaacagaaacaacatagaacatgagtcaagtagtagctttatttcagttgtacttgggcaaaattattcttctgtgggcaatgatcaacaagaaagtcaaaccgctgcgcacactactttcactttttattctactgatggtgtgccataccttccatgtgattctatgcatcagatactggttgaccagcactcagttccttctggagtattttgtttggattcatgtgcatgtgaaaactgctacaacaagcctgagtttgaggacactgtttttgatgcacgtcagcaaattgaatcccgtaatccgctggcatttgctcccaaagttgtgaagcatgaaatcaactcttcgcctaacattatggaagaagcagactggacgaccccatcatcagctaggcacaagagaggttgcaattgcaagaagtcaaagtgcctgaaaaaatactgtgaatgcttccaggctaatgttggatgttctggcgcatgtagatgtgattgttgccaaaatccgtgtggcactaaggcagaccatgaatacaaccgagctgaaaagtgggaaacccaccctgctgagaagctggatactattaagggtgggaatgattgcatcaaggccttggatatggatccgtactctccatgggaaggactttctgttataagcaatctcacgccattgtcaaatccttgctcaagtacaagggtttcttcagcttcatcaagtatgagaaaccgcacaaaaatttcgcaagcccaattacaatcaagtaggcttcagccatcaggtactggtcacttgaaaaggggacggtcacctgtcatatttaccccacaagtatttgaaagcaaggggccctctcagctcagttctgatggtgccagttatgaaagaatggatgatgatatacctgagttactgaaggaaccttctatcccccccaaggttgtcaaaggttcaccaaaccagaaacgtgtgtcacctccacaatcccgagctgagaagttgcggtcaaggtctcctaaaggcttgagaagtggccgcaaattcattttgcaggctatgccttctttccctcctctctccccgtacagcgattctaaagctatcaatgatactaggaatgaccataaaggtacccagaacaattag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04218 map04218

Pfam Domains

Protein Families

TCR

Protein Analysis

927

Amino Acids

100.95

Weight (kDa)

5.88

Isoelectric Point (pI)

55.58

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004241)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g30420 FvH4_6g30420 FvH4_6g30420 FvH4_6g30420 FvH4_6g30420 FvH4_6g30420 FvH4_6g30420
prunus_persica	Prupe.3G078800_v2.0.a1 Prupe.3G078800_v2.0.a1 Prupe.3G078800_v2.0.a1 Prupe.3G078800_v2.0.a1 Prupe.3G078800_v2.0.a1 Prupe.3G078800_v2.0.a1 Prupe.3G078800_v2.0.a1 Prupe.3G078800_v2.0.a1 Prupe.3G078800_v2.0.a1 Prupe.3G078800_v2.0.a1 Prupe.3G078800_v2.0.a1 Prupe.3G078800_v2.0.a1 Prupe.3G078800_v2.0.a1 Prupe.3G078800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0136761
rosa_laevigata	RLG00000019570
rosa_multiflora	Rmu_co8313053.1_g000001 Rmu_sc0001299.1_g000020
rosa_roxburghii	Rroxscaffold_2G00108090
rosa_rugosa	Rorug02G0332900 Rorug02G0333000
rosa_samantha	Rh2AG383700 Rh2BG390400 Rh2CG370200 Rh2DG407000
rosa_wichuraiana	Rw2G031380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	318, 855, 2294
Acc16I	TGCGCA	1 cut(s)	1737
Acc36I	ACCTGC	2 cut(s)	302, 839
Acc65I	GGTACC	1 cut(s)	2768
AccB1I	GGYRCC	2 cut(s)	2510, 2768
AccB7I	CCANNNNNTGG	1 cut(s)	1618
AccI	GTMKAC	3 cut(s)	426, 963, 1231
AccII	CGCG	2 cut(s)	273, 810
AclWI	GGATC	3 cut(s)	1458, 2255, 2268
AcoI	YGGCCR	1 cut(s)	2671
AcsI	RAATTY	2 cut(s)	2376, 2678
AcuI	CTGAAG	6 cut(s)	570, 1107, 1381, 2328, 2393, 2573
AfiI	CCNNNNNNNGG	5 cut(s)	421, 958, 1618, 2279, 2575
AflIII	ACRYGT	1 cut(s)	2605
AjiI	CACGTC	1 cut(s)	1913
AjnI	CCWGG	1 cut(s)	2091
AleI	CACNNNNGTG	1 cut(s)	1224
AloI	GAACNNNNNNTCC	2 cut(s)	2550, 2582
Alw21I	GWGCWC	3 cut(s)	643, 1180, 1562
Alw26I	GTCTC	3 cut(s)	72, 1247, 2655
AlwI	GGATC	3 cut(s)	1458, 2255, 2268
AlwNI	CAGNNNCTG	4 cut(s)	440, 977, 1807, 2423
Ama87I	CYCGRG	3 cut(s)	636, 1173, 2625
AoxI	GGCC	4 cut(s)	54, 2247, 2486, 2671
ApaI	GGGCCC	1 cut(s)	2490
ApeKI	GCWGC	1 cut(s)	1733
ApoI	RAATTY	2 cut(s)	2376, 2678
ArsI	GACNNNNNNTTYG	2 cut(s)	1886, 1918
Asp700I	GAANNNNTTC	3 cut(s)	528, 1065, 1486
Asp718I	GGTACC	1 cut(s)	2768
AspLEI	GCGC	4 cut(s)	273, 810, 1738, 2117
AspS9I	GGNCC	6 cut(s)	55, 367, 904, 1609, 2486, 2487
AsuHPI	GGTGA	6 cut(s)	3, 625, 1162, 2439, 2583, 2604
AvaI	CYCGRG	3 cut(s)	636, 1173, 2625
AvaII	GGWCC	3 cut(s)	367, 904, 1609
BaeGI	GKGCMC	1 cut(s)	2490
BamHI	GGATCC	1 cut(s)	2260
BanI	GGYRCC	2 cut(s)	2510, 2768
BanII	GRGCYC	2 cut(s)	1562, 2490
BbsI	GAAGAC	2 cut(s)	1367, 1431
Bbv12I	GWGCWC	3 cut(s)	643, 1180, 1562
BbvCI	CCTCAGC	1 cut(s)	1495
BbvI	GCAGC	1 cut(s)	1720
BccI	CCATC	7 cut(s)	500, 1037, 1299, 1760, 2026, 2422, 2501
BceAI	ACGGC	3 cut(s)	107, 633, 1170
BcgI	CGANNNNNNTGC	2 cut(s)	1284, 1318
BciT130I	CCWGG	1 cut(s)	2093
BciVI	GTATCC	1 cut(s)	2209
BclI	TGATCA	1 cut(s)	1711
BcoDI	GTCTC	3 cut(s)	72, 1247, 2655
BfaI	CTAG	5 cut(s)	351, 888, 1367, 2028, 2751
BfmI	CTRYAG	1 cut(s)	1257
BfuAI	ACCTGC	2 cut(s)	302, 839
BfuI	GTATCC	1 cut(s)	2209
BglII	AGATCT	2 cut(s)	625, 1162
BisI	GCNGC	6 cut(s)	33, 36, 39, 42, 1734, 2674
BlpI	GCTNAGC	1 cut(s)	1574
BlsI	GCNGC	6 cut(s)	34, 37, 40, 43, 1735, 2675
Bme1390I	CCNGG	1 cut(s)	2093
Bme18I	GGWCC	3 cut(s)	367, 904, 1609
BmeT110I	CYCGRG	3 cut(s)	636, 1173, 2625
BmgBI	CACGTC	1 cut(s)	1913
BmgT120I	GGNCC	6 cut(s)	55, 367, 904, 1609, 2486, 2487
BmiI	GGNNCC	8 cut(s)	217, 754, 2262, 2487, 2488, 2512, 2559, 2770
BmrFI	CCNGG	1 cut(s)	2093
BmsI	GCATC	6 cut(s)	392, 929, 1249, 1807, 1897, 2250
BpiI	GAAGAC	2 cut(s)	1367, 1431
BpmI	CTGGAG	3 cut(s)	287, 824, 1854
Bpu10I	CCTNAGC	5 cut(s)	155, 666, 692, 1203, 1495
Bpu1102I	GCTNAGC	1 cut(s)	1574
BpuEI	CTTGAG	2 cut(s)	2311, 2683
BsaAI	YACGTR	1 cut(s)	1235
BsaBI	GATNNNNATC	2 cut(s)	1549, 2259
BsaI	GGTCTC	1 cut(s)	2655
BsaJI	CCNNGG	6 cut(s)	649, 1186, 1225, 2250, 2273, 2574
BsaWI	WCCGGW	2 cut(s)	13, 1606
BsaXI	ACNNNNNCTCC	6 cut(s)	356, 386, 893, 923, 1483, 1513
Bsc4I	CCNNNNNNNGG	5 cut(s)	421, 958, 1618, 2279, 2575
Bse118I	RCCGGY	3 cut(s)	52, 467, 1004
Bse3DI	GCAATG	1 cut(s)	1714
Bse8I	GATNNNNATC	2 cut(s)	1549, 2259
BseBI	CCWGG	1 cut(s)	2093
BseDI	CCNNGG	6 cut(s)	649, 1186, 1225, 2250, 2273, 2574
BseGI	GGATG	3 cut(s)	1550, 2111, 2536
BseJI	GATNNNNATC	2 cut(s)	1549, 2259
BseLI	CCNNNNNNNGG	5 cut(s)	421, 958, 1618, 2279, 2575
BseMI	GCAATG	1 cut(s)	1714
BseRI	GAGGAG	1 cut(s)	2700
BseSI	GKGCMC	1 cut(s)	2490
BseXI	GCAGC	1 cut(s)	1720
BsgI	GTGCAG	2 cut(s)	397, 934
Bsh1236I	CGCG	2 cut(s)	273, 810
BshFI	GGCC	4 cut(s)	56, 2249, 2488, 2673
BshNI	GGYRCC	2 cut(s)	2510, 2768
BsiHKAI	GWGCWC	3 cut(s)	643, 1180, 1562
BsiHKCI	CYCGRG	3 cut(s)	636, 1173, 2625
BsiSI	CCGG	6 cut(s)	14, 53, 71, 468, 1005, 1607
BslFI	GGGAC	1 cut(s)	2454
BslI	CCNNNNNNNGG	5 cut(s)	421, 958, 1618, 2279, 2575
BsmAI	GTCTC	3 cut(s)	72, 1247, 2655
BsmBI	CGTCTC	1 cut(s)	72
BsmFI	GGGAC	1 cut(s)	2454
BsmI	GAATGC	1 cut(s)	2090
BsnI	GGCC	4 cut(s)	56, 2249, 2488, 2673
Bso31I	GGTCTC	1 cut(s)	2655
BsoBI	CYCGRG	3 cut(s)	636, 1173, 2625
Bsp120I	GGGCCC	1 cut(s)	2486
Bsp1286I	GDGCHC	4 cut(s)	643, 1180, 1562, 2490
Bsp1407I	TGTACA	2 cut(s)	431, 968
Bsp143I	GATC	8 cut(s)	262, 625, 799, 1162, 1463, 1544, 1711, 2260
Bsp1720I	GCTNAGC	1 cut(s)	1574
Bsp19I	CCATGG	1 cut(s)	2273
BspANI	GGCC	4 cut(s)	56, 2249, 2488, 2673
BspFNI	CGCG	2 cut(s)	273, 810
BspHI	TCATGA	2 cut(s)	493, 1030
BspLI	GGNNCC	8 cut(s)	217, 754, 2262, 2487, 2488, 2512, 2559, 2770
BspMAI	CTGCAG	1 cut(s)	1261
BspMI	ACCTGC	2 cut(s)	302, 839
BspPI	GGATC	3 cut(s)	1458, 2255, 2268
BspT107I	GGYRCC	2 cut(s)	2510, 2768
BspTNI	GGTCTC	1 cut(s)	2655
BsrDI	GCAATG	1 cut(s)	1714
BsrFI	RCCGGY	3 cut(s)	52, 467, 1004
BsrGI	TGTACA	2 cut(s)	431, 968
BssAI	RCCGGY	3 cut(s)	52, 467, 1004
BssECI	CCNNGG	6 cut(s)	649, 1186, 1225, 2250, 2273, 2574
BssMI	GATC	8 cut(s)	262, 625, 799, 1162, 1463, 1544, 1711, 2260
BssNAI	GTATAC	1 cut(s)	1232
BssT1I	CCWWGG	3 cut(s)	2250, 2273, 2574
Bst1107I	GTATAC	1 cut(s)	1232
Bst2UI	CCWGG	1 cut(s)	2093
Bst4CI	ACNGT	8 cut(s)	181, 431, 718, 968, 1226, 1900, 2081, 2445
Bst6I	CTCTTC	5 cut(s)	179, 716, 1265, 1492, 1984
BstAPI	GCANNNNNTGC	1 cut(s)	2695
BstAUI	TGTACA	2 cut(s)	431, 968
BstBAI	YACGTR	1 cut(s)	1235
BstC8I	GCNNGC	6 cut(s)	54, 469, 1006, 1941, 2385, 2691
BstDSI	CCRYGG	4 cut(s)	649, 1186, 1225, 2273
BstEII	GGTNACC	3 cut(s)	9, 1286, 2445
BstF5I	GGATG	3 cut(s)	1550, 2111, 2536
BstFNI	CGCG	2 cut(s)	273, 810
BstHHI	GCGC	4 cut(s)	273, 810, 1738, 2117
BstKTI	GATC	8 cut(s)	265, 628, 802, 1165, 1466, 1547, 1714, 2263
BstMAI	GTCTC	3 cut(s)	72, 1247, 2655
BstMBI	GATC	8 cut(s)	262, 625, 799, 1162, 1463, 1544, 1711, 2260
BstMWI	GCNNNNNNNGC	7 cut(s)	38, 41, 119, 416, 953, 2494, 2695
BstNI	CCWGG	1 cut(s)	2093
BstNSI	RCATGY	2 cut(s)	1863, 2121
BstPI	GGTNACC	3 cut(s)	9, 1286, 2445
BstSCI	CCNGG	1 cut(s)	2091
BstSFI	CTRYAG	1 cut(s)	1257
BstSLI	GKGCMC	1 cut(s)	2490
BstSNI	TACGTA	1 cut(s)	1235
BstUI	CGCG	2 cut(s)	273, 810
BstV1I	GCAGC	1 cut(s)	1720
BstV2I	GAAGAC	2 cut(s)	1367, 1431
BstX2I	RGATCY	4 cut(s)	625, 1162, 1463, 2260
BstXI	CCANNNNNNTGG	3 cut(s)	286, 823, 1478
BstYI	RGATCY	4 cut(s)	625, 1162, 1463, 2260
BstZ17I	GTATAC	1 cut(s)	1232
BsuI	GTATCC	1 cut(s)	2209
BsuRI	GGCC	4 cut(s)	56, 2249, 2488, 2673
BtgI	CCRYGG	4 cut(s)	649, 1186, 1225, 2273
BtgZI	GCGATG	1 cut(s)	33
BtrI	CACGTC	1 cut(s)	1913
BtsCI	GGATG	3 cut(s)	1550, 2111, 2536
BtsI	GCAGTG	2 cut(s)	385, 922
BtsIMutI	CAGTG	7 cut(s)	186, 385, 572, 723, 922, 1109, 1896
BveI	ACCTGC	2 cut(s)	302, 839
Cac8I	GCNNGC	6 cut(s)	54, 469, 1006, 1941, 2385, 2691
CaiI	CAGNNNCTG	4 cut(s)	440, 977, 1807, 2423
CciI	TCATGA	2 cut(s)	493, 1030
CfoI	GCGC	4 cut(s)	273, 810, 1738, 2117
Cfr10I	RCCGGY	3 cut(s)	52, 467, 1004
Cfr13I	GGNCC	6 cut(s)	55, 367, 904, 1609, 2486, 2487
CseI	GACGC	1 cut(s)	1321
CspCI	CAANNNNNGTGG	4 cut(s)	580, 615, 1117, 1152
DpnI	GATC	8 cut(s)	264, 627, 801, 1164, 1465, 1546, 1713, 2262
DpnII	GATC	8 cut(s)	262, 625, 799, 1162, 1463, 1544, 1711, 2260
EaeI	YGGCCR	1 cut(s)	2671
Eam1104I	CTCTTC	5 cut(s)	179, 716, 1265, 1492, 1984
EarI	CTCTTC	5 cut(s)	179, 716, 1265, 1492, 1984
Ecl136II	GAGCTC	1 cut(s)	1560
Eco105I	TACGTA	1 cut(s)	1235
Eco130I	CCWWGG	3 cut(s)	2250, 2273, 2574
Eco147I	AGGCCT	1 cut(s)	2249
Eco24I	GRGCYC	2 cut(s)	1562, 2490
Eco31I	GGTCTC	1 cut(s)	2655
Eco47I	GGWCC	3 cut(s)	367, 904, 1609
Eco53kI	GAGCTC	1 cut(s)	1560
Eco57I	CTGAAG	6 cut(s)	570, 1107, 1381, 2328, 2393, 2573
Eco88I	CYCGRG	3 cut(s)	636, 1173, 2625
Eco91I	GGTNACC	3 cut(s)	9, 1286, 2445
EcoICRI	GAGCTC	1 cut(s)	1560
EcoO109I	RGGNCCY	2 cut(s)	2486, 2487
EcoO65I	GGTNACC	3 cut(s)	9, 1286, 2445
EcoRII	CCWGG	1 cut(s)	2091
EcoT14I	CCWWGG	3 cut(s)	2250, 2273, 2574
EcoT22I	ATGCAT	1 cut(s)	1800
EcoT38I	GRGCYC	2 cut(s)	1562, 2490
ErhI	CCWWGG	3 cut(s)	2250, 2273, 2574
Esp3I	CGTCTC	1 cut(s)	72
FalI	AAGNNNNNCTT	2 cut(s)	2326, 2358
FaqI	GGGAC	1 cut(s)	2454
FbaI	TGATCA	1 cut(s)	1711
FblI	GTMKAC	3 cut(s)	426, 963, 1231
Fnu4HI	GCNGC	6 cut(s)	33, 36, 39, 42, 1734, 2674
FokI	GGATG	3 cut(s)	1537, 2118, 2543
FriOI	GRGCYC	2 cut(s)	1562, 2490
Fsp4HI	GCNGC	6 cut(s)	33, 36, 39, 42, 1734, 2674
FspBI	CTAG	5 cut(s)	351, 888, 1367, 2028, 2751
FspI	TGCGCA	1 cut(s)	1737
GlaI	GCGC	4 cut(s)	272, 809, 1737, 2116
GluI	GCNGC	6 cut(s)	33, 36, 39, 42, 1734, 2674
GsuI	CTGGAG	3 cut(s)	287, 824, 1854
HaeIII	GGCC	4 cut(s)	56, 2249, 2488, 2673
HapII	CCGG	6 cut(s)	14, 53, 71, 468, 1005, 1607
HgaI	GACGC	1 cut(s)	1321
HhaI	GCGC	4 cut(s)	273, 810, 1738, 2117
Hin6I	GCGC	4 cut(s)	271, 808, 1736, 2115
HinP1I	GCGC	4 cut(s)	271, 808, 1736, 2115
HincII	GTYRAC	2 cut(s)	1217, 1813
HindII	GTYRAC	2 cut(s)	1217, 1813
HpaII	CCGG	6 cut(s)	14, 53, 71, 468, 1005, 1607
HphI	GGTGA	6 cut(s)	3, 625, 1162, 2439, 2583, 2604
Hpy188I	TCNGA	6 cut(s)	1311, 1530, 1564, 1599, 1803, 2506
Hpy188III	TCNNGA	8 cut(s)	266, 343, 494, 803, 880, 1031, 1833, 2625
Hpy99I	CGWCG	1 cut(s)	128
HpyCH4III	ACNGT	8 cut(s)	181, 431, 718, 968, 1226, 1900, 2081, 2445
HpyCH4IV	ACGT	3 cut(s)	1234, 1912, 2605
HpyF10VI	GCNNNNNNNGC	7 cut(s)	38, 41, 119, 416, 953, 2494, 2695
HpySE526I	ACGT	3 cut(s)	1234, 1912, 2605
HspAI	GCGC	4 cut(s)	271, 808, 1736, 2115
KpnI	GGTACC	1 cut(s)	2772
KroI	GCCGGC	3 cut(s)	52, 467, 1004
KroNI	GCCGGC	3 cut(s)	54, 469, 1006
Ksp22I	TGATCA	1 cut(s)	1711
Kzo9I	GATC	8 cut(s)	262, 625, 799, 1162, 1463, 1544, 1711, 2260
LmnI	GCTCC	7 cut(s)	215, 268, 752, 805, 1504, 1621, 1954
Lsp1109I	GCAGC	1 cut(s)	1720
LweI	GCATC	6 cut(s)	392, 929, 1249, 1807, 1897, 2250
MaeI	CTAG	5 cut(s)	351, 888, 1367, 2028, 2751
MaeII	ACGT	3 cut(s)	1234, 1912, 2605
MalI	GATC	8 cut(s)	264, 627, 801, 1164, 1465, 1546, 1713, 2262
MboI	GATC	8 cut(s)	262, 625, 799, 1162, 1463, 1544, 1711, 2260
MfeI	CAATTG	2 cut(s)	1433, 2047
MflI	RGATCY	4 cut(s)	625, 1162, 1463, 2260
MhlI	GDGCHC	4 cut(s)	643, 1180, 1562, 2490
MlyI	GAGTC	5 cut(s)	143, 680, 1357, 1463, 1661
MmeI	TCCRAC	4 cut(s)	557, 1094, 1599, 2083
Mph1103I	ATGCAT	1 cut(s)	1800
MroNI	GCCGGC	3 cut(s)	52, 467, 1004
MroXI	GAANNNNTTC	3 cut(s)	528, 1065, 1486
MseI	TTAA	3 cut(s)	98, 1331, 2223
MslI	CAYNNNNRTG	5 cut(s)	388, 925, 1224, 1858, 2122
MspA1I	CMGCKG	2 cut(s)	1733, 1939
MspI	CCGG	6 cut(s)	14, 53, 71, 468, 1005, 1607
MspR9I	CCNGG	1 cut(s)	2093
MunI	CAATTG	2 cut(s)	1433, 2047
Mva1269I	GAATGC	1 cut(s)	2090
MvaI	CCWGG	1 cut(s)	2093
MvnI	CGCG	2 cut(s)	273, 810
MwoI	GCNNNNNNNGC	7 cut(s)	38, 41, 119, 416, 953, 2494, 2695
NaeI	GCCGGC	3 cut(s)	54, 469, 1006
NcoI	CCATGG	1 cut(s)	2273
NdeII	GATC	8 cut(s)	262, 625, 799, 1162, 1463, 1544, 1711, 2260
NgoMIV	GCCGGC	3 cut(s)	52, 467, 1004
NlaIV	GGNNCC	8 cut(s)	217, 754, 2262, 2487, 2488, 2512, 2559, 2770
NmuCI	GTSAC	8 cut(s)	9, 631, 1168, 1335, 1421, 2426, 2445, 2610
NsbI	TGCGCA	1 cut(s)	1737
NsiI	ATGCAT	1 cut(s)	1800
NspI	RCATGY	2 cut(s)	1863, 2121
OliI	CACNNNNGTG	1 cut(s)	1224
PagI	TCATGA	2 cut(s)	493, 1030
PceI	AGGCCT	1 cut(s)	2249
PctI	GAATGC	1 cut(s)	2090
PdiI	GCCGGC	3 cut(s)	54, 469, 1006
PdmI	GAANNNNTTC	3 cut(s)	528, 1065, 1486
PfeI	GAWTC	9 cut(s)	22, 476, 541, 1013, 1078, 1790, 1850, 1925, 2729
PflMI	CCANNNNNTGG	1 cut(s)	1618
PkrI	GCNGC	6 cut(s)	34, 37, 40, 43, 1735, 2675
PleI	GAGTC	5 cut(s)	142, 679, 1357, 1462, 1660
PpsI	GAGTC	5 cut(s)	142, 679, 1357, 1462, 1660
Ppu21I	YACGTR	1 cut(s)	1235
PsiI	TTATAA	3 cut(s)	318, 855, 2294
Psp124BI	GAGCTC	1 cut(s)	1562
Psp6I	CCWGG	1 cut(s)	2091
PspEI	GGTNACC	3 cut(s)	9, 1286, 2445
PspGI	CCWGG	1 cut(s)	2091
PspN4I	GGNNCC	8 cut(s)	217, 754, 2262, 2487, 2488, 2512, 2559, 2770
PspOMI	GGGCCC	1 cut(s)	2486
PspPI	GGNCC	6 cut(s)	55, 367, 904, 1609, 2486, 2487
PstI	CTGCAG	1 cut(s)	1261
PstNI	CAGNNNCTG	4 cut(s)	440, 977, 1807, 2423
PsuI	RGATCY	4 cut(s)	625, 1162, 1463, 2260
RseI	CAYNNNNRTG	5 cut(s)	388, 925, 1224, 1858, 2122
SacI	GAGCTC	1 cut(s)	1562
SaqAI	TTAA	3 cut(s)	98, 1331, 2223
SatI	GCNGC	6 cut(s)	33, 36, 39, 42, 1734, 2674
Sau3AI	GATC	8 cut(s)	262, 625, 799, 1162, 1463, 1544, 1711, 2260
Sau96I	GGNCC	6 cut(s)	55, 367, 904, 1609, 2486, 2487
SchI	GAGTC	5 cut(s)	143, 680, 1357, 1463, 1661
ScrFI	CCNGG	1 cut(s)	2093
SduI	GDGCHC	4 cut(s)	643, 1180, 1562, 2490
SfaNI	GCATC	6 cut(s)	392, 929, 1249, 1807, 1897, 2250
SfcI	CTRYAG	1 cut(s)	1257
SinI	GGWCC	3 cut(s)	367, 904, 1609
SmiMI	CAYNNNNRTG	5 cut(s)	388, 925, 1224, 1858, 2122
SmlI	CTYRAG	2 cut(s)	2326, 2662
SmoI	CTYRAG	2 cut(s)	2326, 2662
SnaBI	TACGTA	1 cut(s)	1235
SseBI	AGGCCT	1 cut(s)	2249
SspI	AATATT	2 cut(s)	404, 941
SspMI	CTAG	5 cut(s)	351, 888, 1367, 2028, 2751
SstI	GAGCTC	1 cut(s)	1562
StuI	AGGCCT	1 cut(s)	2249
StyD4I	CCNGG	1 cut(s)	2091
StyI	CCWWGG	3 cut(s)	2250, 2273, 2574
TaaI	ACNGT	8 cut(s)	181, 431, 718, 968, 1226, 1900, 2081, 2445
TaiI	ACGT	3 cut(s)	1237, 1915, 2608
TaqI	TCGA	2 cut(s)	1294, 1543
TatI	WGTACW	7 cut(s)	431, 512, 968, 1049, 1601, 1678, 2330
TauI	GCSGC	5 cut(s)	35, 38, 41, 44, 2676
TfiI	GAWTC	9 cut(s)	22, 476, 541, 1013, 1078, 1790, 1850, 1925, 2729
Tru1I	TTAA	3 cut(s)	98, 1331, 2223
Tru9I	TTAA	3 cut(s)	98, 1331, 2223
TscAI	CASTG	7 cut(s)	186, 385, 579, 723, 922, 1116, 1903
TseFI	GTSAC	8 cut(s)	9, 631, 1168, 1335, 1421, 2426, 2445, 2610
TseI	GCWGC	1 cut(s)	1733
Tsp45I	GTSAC	8 cut(s)	9, 631, 1168, 1335, 1421, 2426, 2445, 2610
TspGWI	ACGGA	4 cut(s)	500, 1037, 2133, 2253
TspRI	CASTG	7 cut(s)	186, 385, 579, 723, 922, 1116, 1903
Van91I	CCANNNNNTGG	1 cut(s)	1618
VpaK11BI	GGWCC	3 cut(s)	367, 904, 1609
XapI	RAATTY	2 cut(s)	2376, 2678
XceI	RCATGY	2 cut(s)	1863, 2121
XcmI	CCANNNNNNNNNTGG	2 cut(s)	2099, 2144
XmiI	GTMKAC	3 cut(s)	426, 963, 1231
XmnI	GAANNNNTTC	3 cut(s)	528, 1065, 1486
XspI	CTAG	5 cut(s)	351, 888, 1367, 2028, 2751
Zsp2I	ATGCAT	1 cut(s)	1800

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.