Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0004241

Physical Location & Seq

Genomic Coordinates Forward (+)

51466570 .. 51471599

Gene Structure 5030 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G031380.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2352 bp

ATGGACGGGTCACCGGCAACGAATCGGGTTACCGCCGCCTCATCGCCGGCCCAAGCCTCGTCTCCGGCTGTGCAAGAGTCGCCTTTCTCCAATTTCCTTAGCAATCTCACTCCTATCAATACAGTGAAGAGTGATAGTTATTCACAAAGATTAGTAGGAGCCTTCTTCCCAACGCCACCAGTTGTCTTTACATCTCCCCATATTGATCTGGAGCGCGAAACCAGTTTCTTGGAAAGGAATGATATAGTTGAAGCAGGTTATAAAGGATGTAATACAACTATATTCCAGAACCCTAGTTTTGAGAAGGAGGTCCAGTTGTGCAGTGCATCAGGGTGTATTGATGAATATTTGGCTGACCCTGCGAAGGTAGACTGTACAGGTTCTGCTGATATACAGAGCAGTATCAATGCCAGCAAAGAATCCAATACGGAAGTTCATGAGGTTATTGATGGTAGTACAAAGAGTGAACCCCTTACAACATTGAATCAAGCTGAAGTGGGTCTGCCTTTACCTTCACTGACACAGATTGAAACCACAATCATTGAGAAGATTGATAAAAATAGTGTAGATCTTGTCACCCGAGCACAAAGCCGTGGACAGAATACAGCTAAGGAGGTTAGTCAACACCACCGTGGTATACGTAGGCATCTCCAATTTGAGACTGCAGTAGCCCAGAAGAGTTCTAACTTTGGTAACCATCGAAGTCTTTGCAGTCTGACGCATGATACTGACAATTTAAGGTCACAATCCAAACTAACAAACTTGAAGACTCTAGCTTCTTCTCATTTAGATAGCAAAGCCTTCAGCAGTCCGCAGGGTGTTAGCTGTGACACTTCACAATTGTCTTCTTGCCTCTGTGAGTCAGTTAGATCCAGCCAAATTGGTGGAAACTCTTCCACCTCAGCTCCTATTCGTTCTGGTATTGGTTTACATCTGAATAGCATTACTCGATCTACATCCATGAGCTCAGATGTATTGCTAAGCAGGAAAGCAACTGGTTGTCTGAGTACACCGGACCAGATGTTGGAGCATGACAACAGAAACAACATAGAACATGAGTCAAGTAGTAGCTTTATTTCAGTTGTACTTGGGCAAAATTATTCTTCTGTGGGCAATGATCAACAAGAAAGTCAAACTGCTGCGCACACTACTTTCACTTTTTATTCTACTGATGGTGTGCCATACCTTCCATGTGATTCTATGCATCAGATACTGGTTGACCAGCACTCAGTTCCTTGTGAGGAGATGAATGCTTCACAGGATGCAAACAAGATCGAGGAATTAAACGAACTGAGCCAAAAAAGGAAAAGGAGAAGAGGTGCAGAGATAAGTGAGGGCTGCAAACGCTGCAACTGTAAGAAGTCTAAATGTTTGAAACTTTATTGTGAGTGCTTTGCAGCTGGAGTATTTTGTTTGGATTCATGTGCATGTGAAAACTGCTACAACAAGCCTGAGTTTGAGGACACTGTTTTTGATGCACGTCAGCAAATTGAATCCCGTAATCCGCTGGCATTTGCTCCCAAAGTTGTGAAGCATGAAATCAACTCTTCGCCTAACATTATGGAAGAAGCAGACTGGACGACCCCATCATCAGCTAGGCACAAGAGAGGTTGCAATTGCAAGAAGTCAAAGTGCCTGAAAAAATACTGTGAATGCTTCCAGGCTAATGTTGGATGTTCTGGCGCATGTAGATGTGATTGTTGCCAAAATCCGTGTGGCACTAAGGCAGACCATGAATACAACCGAGCTGAAAAGTGGGAAACCCACCCTGCTGAGAAGCTGGATACGATTAAGGGTGGGAATGATTGCATCAAGGCCTCGGATATGGATCCGTACTCTCCATGGGAAGGACTTTCTGTTATAAGCAATCTCACGCCATTGTCAAATCCTTGCTCAAGTACAAGGGTTTCTTCAGCTTCATCAAGTATGAGAAACCGCACAAAAATTTCGCAAGCCCAATTACAATCAAGTAGGCTTCAGCCATCAGGTACTGGTCACTTGAAAAGGGGACGGTCACCTGTCATATTTACCCCACAAGTATTTGAAAGCAAGGGGCCCTCTCAGCTCAGTTCTGATGGTGCCAGTTATGAAAGAATGGATGATGATATACCTGAGTTACTGAAGGAACCTTCTATCCCCCCCAAGGTTGTCAAAGGTTCACCAAACCAGAAACGTGTGTCACCTCCACAATCCCGAGCTGAGAAGTTGCGGTCAAGGTCTCCTAAAGGCTTGAGAAGTGGCCGCAAATTCATTTTGCAGGCTATGCCTTCTTTCCCTCCTCTCTCCCCGTACAGCGATTCTAAAGCTATCAATGATACTAGGAATGACCATAAAGGTACCCAGAACAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04218 map04218

Pfam Domains

Protein Families

TCR

Protein Analysis

783

Amino Acids

85.66

Weight (kDa)

7.42

Isoelectric Point (pI)

62.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TCR	PF03638	448 - 483	3.4e-11	Tesmin/TSO1-like CXC domain, cysteine-rich domain
TCR	PF03638	535 - 570	3.9e-10	Tesmin/TSO1-like CXC domain, cysteine-rich domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004241)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g30420 FvH4_6g30420 FvH4_6g30420 FvH4_6g30420 FvH4_6g30420 FvH4_6g30420 FvH4_6g30420
prunus_persica	Prupe.3G078800_v2.0.a1 Prupe.3G078800_v2.0.a1 Prupe.3G078800_v2.0.a1 Prupe.3G078800_v2.0.a1 Prupe.3G078800_v2.0.a1 Prupe.3G078800_v2.0.a1 Prupe.3G078800_v2.0.a1 Prupe.3G078800_v2.0.a1 Prupe.3G078800_v2.0.a1 Prupe.3G078800_v2.0.a1 Prupe.3G078800_v2.0.a1 Prupe.3G078800_v2.0.a1 Prupe.3G078800_v2.0.a1 Prupe.3G078800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0136761
rosa_laevigata	RLG00000019570
rosa_multiflora	Rmu_co8313053.1_g000001 Rmu_sc0001299.1_g000020
rosa_roxburghii	Rroxscaffold_2G00108090
rosa_rugosa	Rorug02G0332900 Rorug02G0333000
rosa_samantha	Rh2AG383700 Rh2BG390400 Rh2CG370200 Rh2DG407000
rosa_wichuraiana	Rw2G031380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	261, 1862
Acc16I	TGCGCA	1 cut(s)	1143
Acc36I	ACCTGC	1 cut(s)	245
Acc65I	GGTACC	1 cut(s)	2336
AccB1I	GGYRCC	2 cut(s)	2078, 2336
AccB7I	CCANNNNNTGG	1 cut(s)	1024
AccI	GTMKAC	2 cut(s)	369, 637
AccII	CGCG	1 cut(s)	216
AciI	CCGC	7 cut(s)	33, 36, 812, 1505, 1936, 2209, 2242
AclWI	GGATC	3 cut(s)	864, 1823, 1836
AcoI	YGGCCR	1 cut(s)	2239
AcsI	RAATTY	2 cut(s)	1944, 2246
AcuI	CTGAAG	5 cut(s)	513, 787, 1896, 1961, 2141
AfaI	GTAC	9 cut(s)	376, 457, 1009, 1086, 1835, 1900, 1990, 2291, 2338
AfiI	CCNNNNNNNGG	4 cut(s)	364, 1024, 1847, 2143
AflIII	ACRYGT	1 cut(s)	2173
AgsI	TTSAA	8 cut(s)	251, 484, 530, 766, 1375, 1493, 2002, 2045
AjiI	CACGTC	1 cut(s)	1481
AjnI	CCWGG	1 cut(s)	1659
AleI	CACNNNNGTG	1 cut(s)	630
AloI	GAACNNNNNNTCC	2 cut(s)	2118, 2150
Alw21I	GWGCWC	2 cut(s)	586, 968
Alw26I	GTCTC	3 cut(s)	66, 653, 2223
AlwI	GGATC	3 cut(s)	864, 1823, 1836
AlwNI	CAGNNNCTG	3 cut(s)	383, 1213, 1991
Ama87I	CYCGRG	2 cut(s)	579, 2193
AoxI	GGCC	4 cut(s)	48, 1815, 2054, 2239
ApaI	GGGCCC	1 cut(s)	2058
ApeKI	GCWGC	4 cut(s)	1139, 1338, 1347, 1397
ApoI	RAATTY	2 cut(s)	1944, 2246
ArsI	GACNNNNNNTTYG	2 cut(s)	1454, 1486
Asp700I	GAANNNNTTC	1 cut(s)	892
Asp718I	GGTACC	1 cut(s)	2336
AspLEI	GCGC	3 cut(s)	216, 1144, 1685
AspS9I	GGNCC	5 cut(s)	49, 310, 1015, 2054, 2055
AsuHPI	GGTGA	5 cut(s)	3, 568, 2007, 2151, 2172
AvaI	CYCGRG	2 cut(s)	579, 2193
AvaII	GGWCC	2 cut(s)	310, 1015
BaeGI	GKGCMC	1 cut(s)	2058
BamHI	GGATCC	1 cut(s)	1828
BanI	GGYRCC	2 cut(s)	2078, 2336
BanII	GRGCYC	2 cut(s)	968, 2058
BbsI	GAAGAC	2 cut(s)	773, 837
Bbv12I	GWGCWC	2 cut(s)	586, 968
BbvCI	CCTCAGC	1 cut(s)	901
BbvI	GCAGC	4 cut(s)	1126, 1325, 1334, 1409
BccI	CCATC	6 cut(s)	443, 705, 1166, 1594, 1990, 2069
BceAI	ACGGC	1 cut(s)	576
BcgI	CGANNNNNNTGC	2 cut(s)	690, 724
BciT130I	CCWGG	1 cut(s)	1661
BciVI	GTATCC	1 cut(s)	1777
BclI	TGATCA	1 cut(s)	1117
BcoDI	GTCTC	3 cut(s)	66, 653, 2223
BfaI	CTAG	4 cut(s)	294, 773, 1596, 2319
BfmI	CTRYAG	1 cut(s)	663
BfuAI	ACCTGC	1 cut(s)	245
BfuI	GTATCC	1 cut(s)	1777
BglII	AGATCT	1 cut(s)	568
BisI	GCNGC	6 cut(s)	36, 1140, 1339, 1348, 1398, 2242
BlpI	GCTNAGC	1 cut(s)	980
BlsI	GCNGC	6 cut(s)	37, 1141, 1340, 1349, 1399, 2243
Bme1390I	CCNGG	1 cut(s)	1661
Bme18I	GGWCC	2 cut(s)	310, 1015
BmeT110I	CYCGRG	2 cut(s)	579, 2193
BmgBI	CACGTC	1 cut(s)	1481
BmgT120I	GGNCC	5 cut(s)	49, 310, 1015, 2054, 2055
BmiI	GGNNCC	7 cut(s)	160, 1830, 2055, 2056, 2080, 2127, 2338
BmrFI	CCNGG	1 cut(s)	1661
BmsI	GCATC	6 cut(s)	335, 655, 1213, 1252, 1465, 1818
BpiI	GAAGAC	2 cut(s)	773, 837
BpmI	CTGGAG	2 cut(s)	230, 1422
Bpu10I	CCTNAGC	3 cut(s)	98, 609, 901
Bpu1102I	GCTNAGC	1 cut(s)	980
BpuEI	CTTGAG	2 cut(s)	1879, 2251
BsaAI	YACGTR	1 cut(s)	641
BsaBI	GATNNNNATC	2 cut(s)	955, 1827
BsaI	GGTCTC	1 cut(s)	2223
BsaJI	CCNNGG	5 cut(s)	592, 631, 1818, 1841, 2142
BsaWI	WCCGGW	1 cut(s)	1012
BsaXI	ACNNNNNCTCC	6 cut(s)	299, 329, 889, 919, 1303, 1333
Bsc4I	CCNNNNNNNGG	4 cut(s)	364, 1024, 1847, 2143
Bse118I	RCCGGY	2 cut(s)	13, 46
Bse1I	ACTGG	8 cut(s)	179, 222, 313, 1000, 1218, 1580, 1996, 2082
Bse3DI	GCAATG	1 cut(s)	1120
Bse8I	GATNNNNATC	2 cut(s)	955, 1827
BseBI	CCWGG	1 cut(s)	1661
BseDI	CCNNGG	5 cut(s)	592, 631, 1818, 1841, 2142
BseGI	GGATG	5 cut(s)	272, 956, 1267, 1679, 2104
BseJI	GATNNNNATC	2 cut(s)	955, 1827
BseLI	CCNNNNNNNGG	4 cut(s)	364, 1024, 1847, 2143
BseMI	GCAATG	1 cut(s)	1120
BseNI	ACTGG	8 cut(s)	179, 222, 313, 1000, 1218, 1580, 1996, 2082
BseRI	GAGGAG	2 cut(s)	1256, 2268
BseSI	GKGCMC	1 cut(s)	2058
BseXI	GCAGC	4 cut(s)	1126, 1325, 1334, 1409
BsgI	GTGCAG	2 cut(s)	340, 1341
Bsh1236I	CGCG	1 cut(s)	216
BshFI	GGCC	4 cut(s)	50, 1817, 2056, 2241
BshNI	GGYRCC	2 cut(s)	2078, 2336
BsiHKAI	GWGCWC	2 cut(s)	586, 968
BsiHKCI	CYCGRG	2 cut(s)	579, 2193
BsiSI	CCGG	4 cut(s)	14, 47, 65, 1013
BslFI	GGGAC	1 cut(s)	2022
BslI	CCNNNNNNNGG	4 cut(s)	364, 1024, 1847, 2143
BsmAI	GTCTC	3 cut(s)	66, 653, 2223
BsmBI	CGTCTC	1 cut(s)	66
BsmFI	GGGAC	1 cut(s)	2022
BsmI	GAATGC	2 cut(s)	1255, 1658
BsnI	GGCC	4 cut(s)	50, 1817, 2056, 2241
Bso31I	GGTCTC	1 cut(s)	2223
BsoBI	CYCGRG	2 cut(s)	579, 2193
Bsp120I	GGGCCC	1 cut(s)	2054
Bsp1286I	GDGCHC	3 cut(s)	586, 968, 2058
Bsp1407I	TGTACA	1 cut(s)	374
Bsp143I	GATC	7 cut(s)	205, 568, 869, 950, 1117, 1272, 1828
Bsp1720I	GCTNAGC	1 cut(s)	980
Bsp19I	CCATGG	1 cut(s)	1841
BspACI	CCGC	7 cut(s)	33, 36, 812, 1505, 1936, 2209, 2242
BspANI	GGCC	4 cut(s)	50, 1817, 2056, 2241
BspFNI	CGCG	1 cut(s)	216
BspHI	TCATGA	1 cut(s)	436
BspLI	GGNNCC	7 cut(s)	160, 1830, 2055, 2056, 2080, 2127, 2338
BspMAI	CTGCAG	1 cut(s)	667
BspMI	ACCTGC	1 cut(s)	245
BspPI	GGATC	3 cut(s)	864, 1823, 1836
BspT107I	GGYRCC	2 cut(s)	2078, 2336
BspTNI	GGTCTC	1 cut(s)	2223
BsrDI	GCAATG	1 cut(s)	1120
BsrFI	RCCGGY	2 cut(s)	13, 46
BsrGI	TGTACA	1 cut(s)	374
BsrI	ACTGG	8 cut(s)	179, 222, 313, 1000, 1218, 1580, 1996, 2082
BssAI	RCCGGY	2 cut(s)	13, 46
BssECI	CCNNGG	5 cut(s)	592, 631, 1818, 1841, 2142
BssMI	GATC	7 cut(s)	205, 568, 869, 950, 1117, 1272, 1828
BssNAI	GTATAC	1 cut(s)	638
BssT1I	CCWWGG	2 cut(s)	1841, 2142
Bst1107I	GTATAC	1 cut(s)	638
Bst2UI	CCWGG	1 cut(s)	1661
Bst4CI	ACNGT	7 cut(s)	124, 374, 632, 1355, 1468, 1649, 2013
Bst6I	CTCTTC	5 cut(s)	122, 671, 898, 1309, 1552
BstAPI	GCANNNNNTGC	2 cut(s)	1347, 2263
BstAUI	TGTACA	1 cut(s)	374
BstBAI	YACGTR	1 cut(s)	641
BstC8I	GCNNGC	5 cut(s)	48, 412, 1509, 1953, 2259
BstDSI	CCRYGG	3 cut(s)	592, 631, 1841
BstEII	GGTNACC	4 cut(s)	9, 28, 692, 2013
BstF5I	GGATG	5 cut(s)	272, 956, 1267, 1679, 2104
BstFNI	CGCG	1 cut(s)	216
BstHHI	GCGC	3 cut(s)	216, 1144, 1685
BstKTI	GATC	7 cut(s)	208, 571, 872, 953, 1120, 1275, 1831
BstMAI	GTCTC	3 cut(s)	66, 653, 2223
BstMBI	GATC	7 cut(s)	205, 568, 869, 950, 1117, 1272, 1828
BstMWI	GCNNNNNNNGC	6 cut(s)	79, 359, 1344, 1347, 2062, 2263
BstNI	CCWGG	1 cut(s)	1661
BstNSI	RCATGY	2 cut(s)	1431, 1689
BstPI	GGTNACC	4 cut(s)	9, 28, 692, 2013
BstSCI	CCNGG	1 cut(s)	1659
BstSFI	CTRYAG	1 cut(s)	663
BstSLI	GKGCMC	1 cut(s)	2058
BstSNI	TACGTA	1 cut(s)	641
BstUI	CGCG	1 cut(s)	216
BstV1I	GCAGC	4 cut(s)	1126, 1325, 1334, 1409
BstV2I	GAAGAC	2 cut(s)	773, 837
BstX2I	RGATCY	3 cut(s)	568, 869, 1828
BstXI	CCANNNNNNTGG	2 cut(s)	229, 884
BstYI	RGATCY	3 cut(s)	568, 869, 1828
BstZ17I	GTATAC	1 cut(s)	638
BsuI	GTATCC	1 cut(s)	1777
BsuRI	GGCC	4 cut(s)	50, 1817, 2056, 2241
BtgI	CCRYGG	3 cut(s)	592, 631, 1841
BtgZI	GCGATG	1 cut(s)	27
BtrI	CACGTC	1 cut(s)	1481
BtsCI	GGATG	5 cut(s)	272, 956, 1267, 1679, 2104
BtsI	GCAGTG	1 cut(s)	328
BtsIMutI	CAGTG	4 cut(s)	129, 328, 515, 1464
BveI	ACCTGC	1 cut(s)	245
Cac8I	GCNNGC	5 cut(s)	48, 412, 1509, 1953, 2259
CaiI	CAGNNNCTG	3 cut(s)	383, 1213, 1991
CciI	TCATGA	1 cut(s)	436
CfoI	GCGC	3 cut(s)	216, 1144, 1685
Cfr10I	RCCGGY	2 cut(s)	13, 46
Cfr13I	GGNCC	5 cut(s)	49, 310, 1015, 2054, 2055
CseI	GACGC	1 cut(s)	727
Csp6I	GTAC	9 cut(s)	375, 456, 1008, 1085, 1834, 1899, 1989, 2290, 2337
CspCI	CAANNNNNGTGG	2 cut(s)	523, 558
CviQI	GTAC	9 cut(s)	375, 456, 1008, 1085, 1834, 1899, 1989, 2290, 2337
DpnI	GATC	7 cut(s)	207, 570, 871, 952, 1119, 1274, 1830
DpnII	GATC	7 cut(s)	205, 568, 869, 950, 1117, 1272, 1828
EaeI	YGGCCR	1 cut(s)	2239
Eam1104I	CTCTTC	5 cut(s)	122, 671, 898, 1309, 1552
EarI	CTCTTC	5 cut(s)	122, 671, 898, 1309, 1552
Ecl136II	GAGCTC	1 cut(s)	966
Eco105I	TACGTA	1 cut(s)	641
Eco130I	CCWWGG	2 cut(s)	1841, 2142
Eco147I	AGGCCT	1 cut(s)	1817
Eco24I	GRGCYC	2 cut(s)	968, 2058
Eco31I	GGTCTC	1 cut(s)	2223
Eco47I	GGWCC	2 cut(s)	310, 1015
Eco53kI	GAGCTC	1 cut(s)	966
Eco57I	CTGAAG	5 cut(s)	513, 787, 1896, 1961, 2141
Eco88I	CYCGRG	2 cut(s)	579, 2193
Eco91I	GGTNACC	4 cut(s)	9, 28, 692, 2013
EcoICRI	GAGCTC	1 cut(s)	966
EcoO109I	RGGNCCY	2 cut(s)	2054, 2055
EcoO65I	GGTNACC	4 cut(s)	9, 28, 692, 2013
EcoRII	CCWGG	1 cut(s)	1659
EcoT14I	CCWWGG	2 cut(s)	1841, 2142
EcoT22I	ATGCAT	1 cut(s)	1206
EcoT38I	GRGCYC	2 cut(s)	968, 2058
ErhI	CCWWGG	2 cut(s)	1841, 2142
Esp3I	CGTCTC	1 cut(s)	66
FalI	AAGNNNNNCTT	2 cut(s)	1894, 1926
FaqI	GGGAC	1 cut(s)	2022
FbaI	TGATCA	1 cut(s)	1117
FblI	GTMKAC	2 cut(s)	369, 637
Fnu4HI	GCNGC	6 cut(s)	36, 1140, 1339, 1348, 1398, 2242
FokI	GGATG	5 cut(s)	279, 943, 1274, 1686, 2111
FriOI	GRGCYC	2 cut(s)	968, 2058
Fsp4HI	GCNGC	6 cut(s)	36, 1140, 1339, 1348, 1398, 2242
FspBI	CTAG	4 cut(s)	294, 773, 1596, 2319
FspI	TGCGCA	1 cut(s)	1143
GlaI	GCGC	3 cut(s)	215, 1143, 1684
GluI	GCNGC	6 cut(s)	36, 1140, 1339, 1348, 1398, 2242
GsuI	CTGGAG	2 cut(s)	230, 1422
HaeIII	GGCC	4 cut(s)	50, 1817, 2056, 2241
HapII	CCGG	4 cut(s)	14, 47, 65, 1013
HgaI	GACGC	1 cut(s)	727
HhaI	GCGC	3 cut(s)	216, 1144, 1685
Hin6I	GCGC	3 cut(s)	214, 1142, 1683
HinP1I	GCGC	3 cut(s)	214, 1142, 1683
HincII	GTYRAC	2 cut(s)	623, 1219
HindII	GTYRAC	2 cut(s)	623, 1219
HpaII	CCGG	4 cut(s)	14, 47, 65, 1013
HphI	GGTGA	5 cut(s)	3, 568, 2007, 2151, 2172
Hpy166II	GTNNAC	9 cut(s)	370, 467, 596, 623, 638, 929, 1010, 1219, 2159
Hpy188I	TCNGA	7 cut(s)	717, 936, 970, 1005, 1209, 1822, 2074
Hpy188III	TCNNGA	4 cut(s)	209, 286, 437, 2193
Hpy8I	GTNNAC	9 cut(s)	370, 467, 596, 623, 638, 929, 1010, 1219, 2159
HpyCH4III	ACNGT	7 cut(s)	124, 374, 632, 1355, 1468, 1649, 2013
HpyCH4IV	ACGT	3 cut(s)	640, 1480, 2173
HpyF10VI	GCNNNNNNNGC	6 cut(s)	79, 359, 1344, 1347, 2062, 2263
HpySE526I	ACGT	3 cut(s)	640, 1480, 2173
HspAI	GCGC	3 cut(s)	214, 1142, 1683
KpnI	GGTACC	1 cut(s)	2340
KroI	GCCGGC	1 cut(s)	46
KroNI	GCCGGC	1 cut(s)	48
Ksp22I	TGATCA	1 cut(s)	1117
Kzo9I	GATC	7 cut(s)	205, 568, 869, 950, 1117, 1272, 1828
LmnI	GCTCC	5 cut(s)	158, 211, 910, 1027, 1522
Lsp1109I	GCAGC	4 cut(s)	1126, 1325, 1334, 1409
LweI	GCATC	6 cut(s)	335, 655, 1213, 1252, 1465, 1818
MaeI	CTAG	4 cut(s)	294, 773, 1596, 2319
MaeII	ACGT	3 cut(s)	640, 1480, 2173
MalI	GATC	7 cut(s)	207, 570, 871, 952, 1119, 1274, 1830
MboI	GATC	7 cut(s)	205, 568, 869, 950, 1117, 1272, 1828
MfeI	CAATTG	2 cut(s)	839, 1615
MflI	RGATCY	3 cut(s)	568, 869, 1828
MhlI	GDGCHC	3 cut(s)	586, 968, 2058
MlyI	GAGTC	4 cut(s)	86, 763, 869, 1067
MmeI	TCCRAC	2 cut(s)	1005, 1651
Mph1103I	ATGCAT	1 cut(s)	1206
MroNI	GCCGGC	1 cut(s)	46
MroXI	GAANNNNTTC	1 cut(s)	892
MseI	TTAA	3 cut(s)	737, 1283, 1791
MslI	CAYNNNNRTG	4 cut(s)	331, 630, 1426, 1690
MspA1I	CMGCKG	2 cut(s)	1400, 1507
MspI	CCGG	4 cut(s)	14, 47, 65, 1013
MspR9I	CCNGG	1 cut(s)	1661
MunI	CAATTG	2 cut(s)	839, 1615
Mva1269I	GAATGC	2 cut(s)	1255, 1658
MvaI	CCWGG	1 cut(s)	1661
MvnI	CGCG	1 cut(s)	216
MwoI	GCNNNNNNNGC	6 cut(s)	79, 359, 1344, 1347, 2062, 2263
NaeI	GCCGGC	1 cut(s)	48
NcoI	CCATGG	1 cut(s)	1841
NdeII	GATC	7 cut(s)	205, 568, 869, 950, 1117, 1272, 1828
NgoMIV	GCCGGC	1 cut(s)	46
NlaIV	GGNNCC	7 cut(s)	160, 1830, 2055, 2056, 2080, 2127, 2338
NmuCI	GTSAC	7 cut(s)	9, 574, 741, 827, 1994, 2013, 2178
NsbI	TGCGCA	1 cut(s)	1143
NsiI	ATGCAT	1 cut(s)	1206
NspI	RCATGY	2 cut(s)	1431, 1689
OliI	CACNNNNGTG	1 cut(s)	630
PagI	TCATGA	1 cut(s)	436
PceI	AGGCCT	1 cut(s)	1817
PctI	GAATGC	2 cut(s)	1255, 1658
PdiI	GCCGGC	1 cut(s)	48
PdmI	GAANNNNTTC	1 cut(s)	892
PfeI	GAWTC	7 cut(s)	22, 419, 484, 1196, 1418, 1493, 2297
PflMI	CCANNNNNTGG	1 cut(s)	1024
PkrI	GCNGC	6 cut(s)	37, 1141, 1340, 1349, 1399, 2243
PleI	GAGTC	4 cut(s)	85, 763, 868, 1066
PpsI	GAGTC	4 cut(s)	85, 763, 868, 1066
Ppu21I	YACGTR	1 cut(s)	641
PsiI	TTATAA	2 cut(s)	261, 1862
Psp124BI	GAGCTC	1 cut(s)	968
Psp6I	CCWGG	1 cut(s)	1659
PspEI	GGTNACC	4 cut(s)	9, 28, 692, 2013
PspGI	CCWGG	1 cut(s)	1659
PspN4I	GGNNCC	7 cut(s)	160, 1830, 2055, 2056, 2080, 2127, 2338
PspOMI	GGGCCC	1 cut(s)	2054
PspPI	GGNCC	5 cut(s)	49, 310, 1015, 2054, 2055
PstI	CTGCAG	1 cut(s)	667
PstNI	CAGNNNCTG	3 cut(s)	383, 1213, 1991
PsuI	RGATCY	3 cut(s)	568, 869, 1828
PvuII	CAGCTG	1 cut(s)	1400
RsaI	GTAC	9 cut(s)	376, 457, 1009, 1086, 1835, 1900, 1990, 2291, 2338
RsaNI	GTAC	9 cut(s)	375, 456, 1008, 1085, 1834, 1899, 1989, 2290, 2337
RseI	CAYNNNNRTG	4 cut(s)	331, 630, 1426, 1690
SacI	GAGCTC	1 cut(s)	968
SaqAI	TTAA	3 cut(s)	737, 1283, 1791
SatI	GCNGC	6 cut(s)	36, 1140, 1339, 1348, 1398, 2242
Sau3AI	GATC	7 cut(s)	205, 568, 869, 950, 1117, 1272, 1828
Sau96I	GGNCC	5 cut(s)	49, 310, 1015, 2054, 2055
SchI	GAGTC	4 cut(s)	86, 763, 869, 1067
ScrFI	CCNGG	1 cut(s)	1661
SduI	GDGCHC	3 cut(s)	586, 968, 2058
SfaNI	GCATC	6 cut(s)	335, 655, 1213, 1252, 1465, 1818
SfcI	CTRYAG	1 cut(s)	663
SinI	GGWCC	2 cut(s)	310, 1015
SmiMI	CAYNNNNRTG	4 cut(s)	331, 630, 1426, 1690
SmlI	CTYRAG	2 cut(s)	1894, 2230
SmoI	CTYRAG	2 cut(s)	1894, 2230
SnaBI	TACGTA	1 cut(s)	641
SseBI	AGGCCT	1 cut(s)	1817
SsiI	CCGC	7 cut(s)	33, 36, 812, 1505, 1936, 2209, 2242
SspI	AATATT	1 cut(s)	347
SspMI	CTAG	4 cut(s)	294, 773, 1596, 2319
SstI	GAGCTC	1 cut(s)	968
StuI	AGGCCT	1 cut(s)	1817
StyD4I	CCNGG	1 cut(s)	1659
StyI	CCWWGG	2 cut(s)	1841, 2142
TaaI	ACNGT	7 cut(s)	124, 374, 632, 1355, 1468, 1649, 2013
TaiI	ACGT	3 cut(s)	643, 1483, 2176
TaqI	TCGA	3 cut(s)	700, 949, 1275
TatI	WGTACW	5 cut(s)	374, 455, 1007, 1084, 1898
TauI	GCSGC	2 cut(s)	38, 2244
TfiI	GAWTC	7 cut(s)	22, 419, 484, 1196, 1418, 1493, 2297
Tru1I	TTAA	3 cut(s)	737, 1283, 1791
Tru9I	TTAA	3 cut(s)	737, 1283, 1791
TscAI	CASTG	4 cut(s)	129, 328, 522, 1471
TseFI	GTSAC	7 cut(s)	9, 574, 741, 827, 1994, 2013, 2178
TseI	GCWGC	4 cut(s)	1139, 1338, 1347, 1397
Tsp45I	GTSAC	7 cut(s)	9, 574, 741, 827, 1994, 2013, 2178
TspDTI	ATGAA	9 cut(s)	357, 425, 1262, 1410, 1551, 1749, 1908, 2103, 2239
TspGWI	ACGGA	3 cut(s)	443, 1701, 1821
TspRI	CASTG	4 cut(s)	129, 328, 522, 1471
Van91I	CCANNNNNTGG	1 cut(s)	1024
VpaK11BI	GGWCC	2 cut(s)	310, 1015
XapI	RAATTY	2 cut(s)	1944, 2246
XceI	RCATGY	2 cut(s)	1431, 1689
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1667, 1712
XmiI	GTMKAC	2 cut(s)	369, 637
XmnI	GAANNNNTTC	1 cut(s)	892
XspI	CTAG	4 cut(s)	294, 773, 1596, 2319
Zsp2I	ATGCAT	1 cut(s)	1206

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.