Rmu_sc0001382.1_g000022

Heparan-alpha-glucosaminide N-acetyltransferase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001382.1
OG0009646
Physical Location & Seq
Reverse (-)
75016 .. 79486
4471 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1272 bp
atggccgacgacgaggagtatgtcctcattccaaacggagaagaagaccatgcagtagtcatcgccaccactcccaagcctccacgtgtcgcctccctcgacgtcttccgcggcctctgcgtcttcctgatgatggtggtggattacggcggatcgattattccggcgattgttcactcgccgtggaacggtctccacttggctgactttgtgatgccgttttttctcttcattgccggagtttctcttgctctggtctacaagagagtgactaacagagttgaagctacatggaaggccgtgtttcgggcccttaaactttttctcttaggtgttcttcttcaaggtggttattttcatggagtgagttccttgacttatggagttgacatcgaaagaatacggtggtttggcattttgcagaggatagccattggatatattgttgcggccttatgcgaaatctggctttcacatcgcacctcgagggaagtgaggtttttcaggagctattactggcactggtgtgtcatctttttgttatcagcaatatacgctgggttgctgtatggtttgtatgttccagattgggaattcaaagcatcaacacctacctctttgtctccttctgatgatacacatgtttacgtggtgagatgttctctgagaggagatcttggacctggttgtaattctgctgggatgattgatcgttacattgtgggtgttgatcatctctattcaaaacccgtttacaggaacctgaaggattgcaatatgtctactgatggtcggattccagagagttcgccttcatggtgtcatgctccttttgatcctgaaggtatattaagcaccctaacagcagcagtgacttgcataattggacttcaatatggtcacattcttgcacacatacaggaccacaaagggcgcctaaatatttggtccttgttttcagtttcaatgtttgtcctgggatcatttcttgccttcataggcgttcctgtaaataaatctctgtacactatcagttatatgctaattacttctgcatctgcaggcatggcattttgcgctctatatctgctgatagatgtttacggttaccggtgcataacgtttgtgttggagtggatgggcatacattctttgagtattttcataattctaacttccaacctagctgttattgcgattcagggattctactggacagatcctgagaataatattgttcactggatcatagcactttttgtgcacaagtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00531 ko01100 ko04142 map00531 map01100 map04142
Pfam Domains
Protein Families
DUF1624

Protein Analysis

423

Amino Acids

47.51

Weight (kDa)

6.56

Isoelectric Point (pI)

34.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HGSNAT_cat PF07786 29 - 153 5.6e-06 Heparan-alpha-glucosaminide N-acetyltransferase, catalytic
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 105
AbsI CCTCGAGG 1 cut(s) 484
AccB1I GGYRCC 1 cut(s) 933
AccI GTMKAC 2 cut(s) 258, 782
AccII CGCG 1 cut(s) 111
AciI CCGC 4 cut(s) 109, 111, 150, 449
AclI AACGTT 1 cut(s) 1121
AclWI GGATC 5 cut(s) 160, 830, 988, 1214, 1253
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 1 cut(s) 593
AcuI CTGAAG 2 cut(s) 785, 861
AcvI CACGTG 1 cut(s) 86
AcyI GRCGYC 2 cut(s) 102, 934
AfaI GTAC 1 cut(s) 1025
AfiI CCNNNNNNNGG 4 cut(s) 133, 188, 306, 756
AflIII ACRYGT 2 cut(s) 85, 640
AgeI ACCGGT 1 cut(s) 1110
AgsI TTSAA 6 cut(s) 284, 344, 598, 744, 893, 966
AjnI CCWGG 2 cut(s) 682, 975
AleI CACNNNNGTG 1 cut(s) 525
AluBI AGCT 3 cut(s) 287, 510, 1187
AluI AGCT 3 cut(s) 287, 510, 1187
Alw21I GWGCWC 1 cut(s) 1266
Alw26I GTCTC 2 cut(s) 197, 627
Alw44I GTGCAC 1 cut(s) 1262
AlwI GGATC 5 cut(s) 160, 830, 988, 1214, 1253
AlwNI CAGNNNCTG 1 cut(s) 1223
Ama87I CYCGRG 1 cut(s) 484
AoxI GGCC 5 cut(s) 3, 112, 297, 309, 450
ApaI GGGCCC 1 cut(s) 313
ApaLI GTGCAC 1 cut(s) 1262
ApeKI GCWGC 1 cut(s) 866
ApoI RAATTY 1 cut(s) 593
AsiGI ACCGGT 1 cut(s) 1110
AspLEI GCGC 2 cut(s) 936, 1079
AspS9I GGNCC 5 cut(s) 309, 310, 680, 922, 948
AsuHPI GGTGA 1 cut(s) 664
AvaI CYCGRG 1 cut(s) 484
AvaII GGWCC 3 cut(s) 680, 922, 948
BaeGI GKGCMC 2 cut(s) 313, 1266
BaeI ACNNNNGTAYC 2 cut(s) 627, 660
BanI GGYRCC 1 cut(s) 933
BanII GRGCYC 1 cut(s) 313
BbrPI CACGTG 1 cut(s) 86
BbsI GAAGAC 3 cut(s) 51, 97, 115
Bbv12I GWGCWC 1 cut(s) 1266
BbvI GCAGC 1 cut(s) 878
BccI CCATC 3 cut(s) 127, 782, 1132
BceAI ACGGC 4 cut(s) 163, 166, 202, 284
BciT130I CCWGG 2 cut(s) 684, 977
BclI TGATCA 1 cut(s) 730
BcoDI GTCTC 2 cut(s) 197, 627
BfaI CTAG 1 cut(s) 1184
BfmI CTRYAG 1 cut(s) 1059
BfoI RGCGCY 1 cut(s) 937
BglII AGATCT 1 cut(s) 673
BisI GCNGC 3 cut(s) 112, 450, 867
BlsI GCNGC 3 cut(s) 113, 451, 868
Bme1390I CCNGG 2 cut(s) 684, 977
Bme18I GGWCC 3 cut(s) 680, 922, 948
BmeT110I CYCGRG 1 cut(s) 484
BmgT120I GGNCC 5 cut(s) 309, 310, 680, 922, 948
BmiI GGNNCC 3 cut(s) 311, 761, 935
BmrFI CCNGG 2 cut(s) 684, 977
BmsI GCATC 3 cut(s) 204, 611, 1064
BpiI GAAGAC 3 cut(s) 51, 97, 115
BplI GAGNNNNNCTC 2 cut(s) 646, 678
Bsa29I ATCGAT 1 cut(s) 155
BsaAI YACGTR 2 cut(s) 86, 649
BsaHI GRCGYC 2 cut(s) 102, 934
BsaI GGTCTC 1 cut(s) 197
BsaJI CCNNGG 3 cut(s) 109, 182, 976
BsaWI WCCGGW 1 cut(s) 1110
Bsc4I CCNNNNNNNGG 4 cut(s) 133, 188, 306, 756
Bse118I RCCGGY 1 cut(s) 1110
Bse1I ACTGG 4 cut(s) 521, 527, 1217, 1247
Bse3DI GCAATG 1 cut(s) 231
BseBI CCWGG 2 cut(s) 684, 977
BseCI ATCGAT 1 cut(s) 155
BseDI CCNNGG 3 cut(s) 109, 182, 976
BseGI GGATG 2 cut(s) 708, 1143
BseLI CCNNNNNNNGG 4 cut(s) 133, 188, 306, 756
BseMI GCAATG 1 cut(s) 231
BseMII CTCAG 2 cut(s) 656, 1215
BseNI ACTGG 4 cut(s) 521, 527, 1217, 1247
BseRI GAGGAG 2 cut(s) 29, 684
BseSI GKGCMC 2 cut(s) 313, 1266
BseXI GCAGC 1 cut(s) 878
BseYI CCCAGC 2 cut(s) 557, 698
Bsh1236I CGCG 1 cut(s) 111
BshFI GGCC 5 cut(s) 5, 114, 299, 311, 452
BshNI GGYRCC 1 cut(s) 933
BshTI ACCGGT 1 cut(s) 1110
BshVI ATCGAT 1 cut(s) 155
BsiHKAI GWGCWC 1 cut(s) 1266
BsiHKCI CYCGRG 1 cut(s) 484
BsiSI CCGG 3 cut(s) 164, 237, 1111
BslI CCNNNNNNNGG 4 cut(s) 133, 188, 306, 756
BsmAI GTCTC 2 cut(s) 197, 627
BsnI GGCC 5 cut(s) 5, 114, 299, 311, 452
Bso31I GGTCTC 1 cut(s) 197
BsoBI CYCGRG 1 cut(s) 484
Bsp120I GGGCCC 1 cut(s) 309
Bsp1286I GDGCHC 2 cut(s) 313, 1266
Bsp1407I TGTACA 1 cut(s) 1023
Bsp143I GATC 8 cut(s) 152, 673, 709, 730, 835, 980, 1219, 1245
BspACI CCGC 4 cut(s) 109, 111, 150, 449
BspANI GGCC 5 cut(s) 5, 114, 299, 311, 452
BspCNI CTCAG 2 cut(s) 657, 1216
BspDI ATCGAT 1 cut(s) 155
BspFNI CGCG 1 cut(s) 111
BspLI GGNNCC 3 cut(s) 311, 761, 935
BspMAI CTGCAG 1 cut(s) 1063
BspPI GGATC 5 cut(s) 160, 830, 988, 1214, 1253
BspT107I GGYRCC 1 cut(s) 933
BspTNI GGTCTC 1 cut(s) 197
BsrDI GCAATG 1 cut(s) 231
BsrFI RCCGGY 1 cut(s) 1110
BsrGI TGTACA 1 cut(s) 1023
BsrI ACTGG 4 cut(s) 521, 527, 1217, 1247
BssAI RCCGGY 1 cut(s) 1110
BssECI CCNNGG 3 cut(s) 109, 182, 976
BssMI GATC 8 cut(s) 152, 673, 709, 730, 835, 980, 1219, 1245
BssNI GRCGYC 2 cut(s) 102, 934
Bst2UI CCWGG 2 cut(s) 684, 977
Bst4CI ACNGT 3 cut(s) 191, 405, 1106
Bst6I CTCTTC 1 cut(s) 233
BstACI GRCGYC 2 cut(s) 102, 934
BstAUI TGTACA 1 cut(s) 1023
BstBAI YACGTR 2 cut(s) 86, 649
BstC8I GCNNGC 1 cut(s) 1063
BstDEI CTNAG 3 cut(s) 328, 665, 1224
BstDSI CCRYGG 2 cut(s) 109, 182
BstEII GGTNACC 1 cut(s) 1106
BstF5I GGATG 2 cut(s) 708, 1143
BstFNI CGCG 1 cut(s) 111
BstH2I RGCGCY 1 cut(s) 937
BstHHI GCGC 2 cut(s) 936, 1079
BstKTI GATC 8 cut(s) 155, 676, 712, 733, 838, 983, 1222, 1248
BstMAI GTCTC 2 cut(s) 197, 627
BstMBI GATC 8 cut(s) 152, 673, 709, 730, 835, 980, 1219, 1245
BstMWI GCNNNNNNNGC 5 cut(s) 117, 554, 1067, 1076, 1193
BstNI CCWGG 2 cut(s) 684, 977
BstNSI RCATGY 1 cut(s) 644
BstPI GGTNACC 1 cut(s) 1106
BstSCI CCNGG 2 cut(s) 682, 975
BstSFI CTRYAG 1 cut(s) 1059
BstSLI GKGCMC 2 cut(s) 313, 1266
BstUI CGCG 1 cut(s) 111
BstV1I GCAGC 1 cut(s) 878
BstV2I GAAGAC 3 cut(s) 51, 97, 115
BstX2I RGATCY 2 cut(s) 673, 1219
BstYI RGATCY 2 cut(s) 673, 1219
Bsu15I ATCGAT 1 cut(s) 155
BsuRI GGCC 5 cut(s) 5, 114, 299, 311, 452
BsuTUI ATCGAT 1 cut(s) 155
BtgI CCRYGG 2 cut(s) 109, 182
BtgZI GCGATG 2 cut(s) 46, 461
BtsCI GGATG 2 cut(s) 708, 1143
BtsI GCAGTG 1 cut(s) 876
BtsIMutI CAGTG 3 cut(s) 520, 876, 1240
Cac8I GCNNGC 1 cut(s) 1063
CaiI CAGNNNCTG 1 cut(s) 1223
CfoI GCGC 2 cut(s) 936, 1079
Cfr10I RCCGGY 1 cut(s) 1110
Cfr13I GGNCC 5 cut(s) 309, 310, 680, 922, 948
Cfr42I CCGCGG 1 cut(s) 112
ClaI ATCGAT 1 cut(s) 155
CseI GACGC 1 cut(s) 109
CsiI ACCWGGT 1 cut(s) 682
Csp6I GTAC 1 cut(s) 1024
CspAI ACCGGT 1 cut(s) 1110
CviAII CATG 7 cut(s) 50, 291, 359, 641, 816, 824, 1066
CviQI GTAC 1 cut(s) 1024
DdeI CTNAG 3 cut(s) 328, 665, 1224
DinI GGCGCC 1 cut(s) 935
DpnI GATC 8 cut(s) 154, 675, 711, 732, 837, 982, 1221, 1247
DpnII GATC 8 cut(s) 152, 673, 709, 730, 835, 980, 1219, 1245
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 233
EarI CTCTTC 1 cut(s) 233
EciI GGCGGA 1 cut(s) 165
Eco24I GRGCYC 1 cut(s) 313
Eco31I GGTCTC 1 cut(s) 197
Eco47I GGWCC 3 cut(s) 680, 922, 948
Eco57I CTGAAG 2 cut(s) 785, 861
Eco72I CACGTG 1 cut(s) 86
Eco88I CYCGRG 1 cut(s) 484
Eco91I GGTNACC 1 cut(s) 1106
EcoO109I RGGNCCY 1 cut(s) 310
EcoO65I GGTNACC 1 cut(s) 1106
EcoRI GAATTC 1 cut(s) 593
EcoRII CCWGG 2 cut(s) 682, 975
EcoT38I GRGCYC 1 cut(s) 313
EgeI GGCGCC 1 cut(s) 935
EheI GGCGCC 1 cut(s) 935
FaeI CATG 7 cut(s) 53, 294, 362, 644, 819, 827, 1069
FatI CATG 7 cut(s) 49, 290, 358, 640, 815, 823, 1065
FbaI TGATCA 1 cut(s) 730
FblI GTMKAC 2 cut(s) 258, 782
Fnu4HI GCNGC 3 cut(s) 112, 450, 867
FokI GGATG 2 cut(s) 715, 1150
FriOI GRGCYC 1 cut(s) 313
Fsp4HI GCNGC 3 cut(s) 112, 450, 867
FspBI CTAG 1 cut(s) 1184
GlaI GCGC 2 cut(s) 935, 1078
GluI GCNGC 3 cut(s) 112, 450, 867
GsaI CCCAGC 2 cut(s) 561, 702
HaeII RGCGCY 1 cut(s) 937
HaeIII GGCC 5 cut(s) 5, 114, 299, 311, 452
HapII CCGG 3 cut(s) 164, 237, 1111
HgaI GACGC 1 cut(s) 109
HhaI GCGC 2 cut(s) 936, 1079
Hin1I GRCGYC 2 cut(s) 102, 934
Hin1II CATG 7 cut(s) 53, 294, 362, 644, 819, 827, 1069
Hin6I GCGC 2 cut(s) 934, 1077
HinP1I GCGC 2 cut(s) 934, 1077
HincII GTYRAC 1 cut(s) 388
HindII GTYRAC 1 cut(s) 388
HinfI GANTC 3 cut(s) 796, 1198, 1206
HpaII CCGG 3 cut(s) 164, 237, 1111
HphI GGTGA 1 cut(s) 664
Hpy188I TCNGA 3 cut(s) 631, 666, 795
Hpy188III TCNNGA 6 cut(s) 127, 505, 584, 800, 839, 1223
Hpy99I CGWCG 3 cut(s) 11, 14, 104
HpyAV CCTTC 6 cut(s) 289, 636, 760, 822, 836, 1003
HpyCH4III ACNGT 3 cut(s) 191, 405, 1106
HpyCH4IV ACGT 4 cut(s) 85, 102, 648, 1121
HpyCH4V TGCA 9 cut(s) 53, 421, 774, 879, 911, 1055, 1061, 1116, 1264
HpyF10VI GCNNNNNNNGC 5 cut(s) 117, 554, 1067, 1076, 1193
HpyF3I CTNAG 3 cut(s) 328, 665, 1224
HpySE526I ACGT 4 cut(s) 85, 102, 648, 1121
Hsp92I GRCGYC 2 cut(s) 102, 934
Hsp92II CATG 7 cut(s) 53, 294, 362, 644, 819, 827, 1069
HspAI GCGC 2 cut(s) 934, 1077
KasI GGCGCC 1 cut(s) 933
Ksp22I TGATCA 1 cut(s) 730
KspI CCGCGG 1 cut(s) 112
Kzo9I GATC 8 cut(s) 152, 673, 709, 730, 835, 980, 1219, 1245
LmnI GCTCC 2 cut(s) 507, 832
Lsp1109I GCAGC 1 cut(s) 878
LweI GCATC 3 cut(s) 204, 611, 1064
MabI ACCWGGT 1 cut(s) 682
MaeI CTAG 1 cut(s) 1184
MaeII ACGT 4 cut(s) 85, 102, 648, 1121
MaeIII GTNAC 5 cut(s) 268, 713, 871, 899, 1106
MalI GATC 8 cut(s) 154, 675, 711, 732, 837, 982, 1221, 1247
MboI GATC 8 cut(s) 152, 673, 709, 730, 835, 980, 1219, 1245
MboII GAAGA 7 cut(s) 53, 56, 97, 115, 220, 329, 332
MflI RGATCY 2 cut(s) 673, 1219
MhlI GDGCHC 2 cut(s) 313, 1266
MluCI AATT 5 cut(s) 593, 691, 882, 1044, 1167
Mly113I GGCGCC 1 cut(s) 934
MmeI TCCRAC 3 cut(s) 773, 1110, 1203
MseI TTAA 2 cut(s) 315, 851
MslI CAYNNNNRTG 1 cut(s) 525
MspA1I CMGCKG 1 cut(s) 111
MspI CCGG 3 cut(s) 164, 237, 1111
MspR9I CCNGG 2 cut(s) 684, 977
MvaI CCWGG 2 cut(s) 684, 977
MvnI CGCG 1 cut(s) 111
MwoI GCNNNNNNNGC 5 cut(s) 117, 554, 1067, 1076, 1193
NarI GGCGCC 1 cut(s) 934
NdeII GATC 8 cut(s) 152, 673, 709, 730, 835, 980, 1219, 1245
NlaIII CATG 7 cut(s) 53, 294, 362, 644, 819, 827, 1069
NlaIV GGNNCC 3 cut(s) 311, 761, 935
NmuCI GTSAC 3 cut(s) 268, 871, 899
NspI RCATGY 1 cut(s) 644
OliI CACNNNNGTG 1 cut(s) 525
PaeR7I CTCGAG 1 cut(s) 484
PciI ACATGT 1 cut(s) 640
PcsI WCGNNNNNNNCGW 1 cut(s) 96
PfeI GAWTC 3 cut(s) 796, 1198, 1206
PinAI ACCGGT 1 cut(s) 1110
PkrI GCNGC 3 cut(s) 113, 451, 868
PluTI GGCGCC 1 cut(s) 937
PmaCI CACGTG 1 cut(s) 86
PmlI CACGTG 1 cut(s) 86
Ppu21I YACGTR 2 cut(s) 86, 649
PscI ACATGT 1 cut(s) 640
Psp1406I AACGTT 1 cut(s) 1121
Psp6I CCWGG 2 cut(s) 682, 975
PspCI CACGTG 1 cut(s) 86
PspEI GGTNACC 1 cut(s) 1106
PspFI CCCAGC 2 cut(s) 557, 698
PspGI CCWGG 2 cut(s) 682, 975
PspN4I GGNNCC 3 cut(s) 311, 761, 935
PspOMI GGGCCC 1 cut(s) 309
PspPI GGNCC 5 cut(s) 309, 310, 680, 922, 948
PspXI VCTCGAGB 1 cut(s) 484
PstI CTGCAG 1 cut(s) 1063
PstNI CAGNNNCTG 1 cut(s) 1223
PsuI RGATCY 2 cut(s) 673, 1219
RsaI GTAC 1 cut(s) 1025
RsaNI GTAC 1 cut(s) 1024
RseI CAYNNNNRTG 1 cut(s) 525
SacII CCGCGG 1 cut(s) 112
SaqAI TTAA 2 cut(s) 315, 851
SatI GCNGC 3 cut(s) 112, 450, 867
Sau3AI GATC 8 cut(s) 152, 673, 709, 730, 835, 980, 1219, 1245
Sau96I GGNCC 5 cut(s) 309, 310, 680, 922, 948
ScrFI CCNGG 2 cut(s) 684, 977
SduI GDGCHC 2 cut(s) 313, 1266
SexAI ACCWGGT 1 cut(s) 682
SfaNI GCATC 3 cut(s) 204, 611, 1064
SfcI CTRYAG 1 cut(s) 1059
SfoI GGCGCC 1 cut(s) 935
Sfr274I CTCGAG 1 cut(s) 484
Sfr303I CCGCGG 1 cut(s) 112
SgrBI CCGCGG 1 cut(s) 112
SinI GGWCC 3 cut(s) 680, 922, 948
SlaI CTCGAG 1 cut(s) 484
SmiMI CAYNNNNRTG 1 cut(s) 525
SmlI CTYRAG 1 cut(s) 484
SmoI CTYRAG 1 cut(s) 484
Sse9I AATT 5 cut(s) 593, 691, 882, 1044, 1167
SsiI CCGC 4 cut(s) 109, 111, 150, 449
SspDI GGCGCC 1 cut(s) 933
SspI AATATT 2 cut(s) 943, 1234
SspMI CTAG 1 cut(s) 1184
StyD4I CCNGG 2 cut(s) 682, 975
TaaI ACNGT 3 cut(s) 191, 405, 1106
TaiI ACGT 4 cut(s) 88, 105, 651, 1124
TaqI TCGA 4 cut(s) 99, 155, 393, 485
TasI AATT 5 cut(s) 593, 691, 882, 1044, 1167
TatI WGTACW 1 cut(s) 1023
TauI GCSGC 2 cut(s) 114, 452
TfiI GAWTC 3 cut(s) 796, 1198, 1206
Tru1I TTAA 2 cut(s) 315, 851
Tru9I TTAA 2 cut(s) 315, 851
TscAI CASTG 3 cut(s) 527, 876, 1247
TseFI GTSAC 3 cut(s) 268, 871, 899
TseI GCWGC 1 cut(s) 866
Tsp45I GTSAC 3 cut(s) 268, 871, 899
TspDTI ATGAA 5 cut(s) 220, 347, 804, 985, 1153
TspGWI ACGGA 1 cut(s) 51
TspRI CASTG 3 cut(s) 527, 876, 1247
VneI GTGCAC 1 cut(s) 1262
VpaK11BI GGWCC 3 cut(s) 680, 922, 948
XapI RAATTY 1 cut(s) 593
XceI RCATGY 1 cut(s) 644
XhoI CTCGAG 1 cut(s) 484
XmiI GTMKAC 2 cut(s) 258, 782
XspI CTAG 1 cut(s) 1184
ZraI GACGTC 1 cut(s) 103
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.