Rmu_sc0001733.1_g000008

Phosphatidylinositol 4-kinase gamma

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001733.1
Physical Location & Seq
Forward (+)
54205 .. 54546
342 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 342 bp
atgcagtttggagagtgcacatttgagtggctttactggcctcaagctaagcaacatcatctgtctgaaactctgaactacatccaatttctagatgcagaaaaagatattgaccttttaaggttctatggatggaatctaccacttgaatgtgcctgcactgtccgcattgccaccatgcttctaaagaaaggtgtagagagaggactcactgtagagagaggactcactccctttgccattggaagtttcctgtgttcggagacgtcgaagaaagaatatgttattgaatgtggatgttcggagacgtcgaagaaagaatatgttattgaatgtggatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

113

Amino Acids

13.03

Weight (kDa)

5.18

Isoelectric Point (pI)

55.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0019688)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 269, 311
AciI CCGC 1 cut(s) 166
AcyI GRCGYC 2 cut(s) 266, 308
AfiI CCNNNNNNNGG 1 cut(s) 259
AgsI TTSAA 3 cut(s) 149, 290, 332
AluBI AGCT 1 cut(s) 47
AluI AGCT 1 cut(s) 47
Alw21I GWGCWC 1 cut(s) 20
Alw26I GTCTC 2 cut(s) 257, 299
Alw44I GTGCAC 1 cut(s) 16
AoxI GGCC 1 cut(s) 38
ApaLI GTGCAC 1 cut(s) 16
BaeGI GKGCMC 1 cut(s) 20
Bbv12I GWGCWC 1 cut(s) 20
BccI CCATC 1 cut(s) 126
BcoDI GTCTC 2 cut(s) 257, 299
BfaI CTAG 1 cut(s) 92
BfmI CTRYAG 1 cut(s) 213
BlpI GCTNAGC 1 cut(s) 48
BmsI GCATC 1 cut(s) 85
Bpu1102I GCTNAGC 1 cut(s) 48
BpuEI CTTGAG 1 cut(s) 27
BsaHI GRCGYC 2 cut(s) 266, 308
Bsc4I CCNNNNNNNGG 1 cut(s) 259
Bse1I ACTGG 1 cut(s) 41
Bse3DI GCAATG 1 cut(s) 168
BseGI GGATG 3 cut(s) 81, 137, 302
BseLI CCNNNNNNNGG 1 cut(s) 259
BseMI GCAATG 1 cut(s) 168
BseNI ACTGG 1 cut(s) 41
BseSI GKGCMC 1 cut(s) 20
BsgI GTGCAG 1 cut(s) 142
BshFI GGCC 1 cut(s) 40
BsiHKAI GWGCWC 1 cut(s) 20
BslI CCNNNNNNNGG 1 cut(s) 259
BsmAI GTCTC 2 cut(s) 257, 299
BsmBI CGTCTC 2 cut(s) 257, 299
BsnI GGCC 1 cut(s) 40
Bsp1286I GDGCHC 1 cut(s) 20
Bsp1720I GCTNAGC 1 cut(s) 48
BspACI CCGC 1 cut(s) 166
BspANI GGCC 1 cut(s) 40
BsrDI GCAATG 1 cut(s) 168
BsrI ACTGG 1 cut(s) 41
BssNI GRCGYC 2 cut(s) 266, 308
Bst4CI ACNGT 2 cut(s) 163, 214
BstACI GRCGYC 2 cut(s) 266, 308
BstC8I GCNNGC 1 cut(s) 157
BstDEI CTNAG 1 cut(s) 48
BstF5I GGATG 3 cut(s) 81, 137, 302
BstMAI GTCTC 2 cut(s) 257, 299
BstMWI GCNNNNNNNGC 2 cut(s) 37, 165
BstSFI CTRYAG 1 cut(s) 213
BstSLI GKGCMC 1 cut(s) 20
BsuRI GGCC 1 cut(s) 40
BtsCI GGATG 3 cut(s) 81, 137, 302
BtsIMutI CAGTG 2 cut(s) 159, 210
Cac8I GCNNGC 1 cut(s) 157
CviAII CATG 1 cut(s) 178
CviJI RGCY 3 cut(s) 31, 40, 47
CviKI_1 RGCY 3 cut(s) 31, 40, 47
DdeI CTNAG 1 cut(s) 48
Esp3I CGTCTC 2 cut(s) 257, 299
FaeI CATG 1 cut(s) 181
FaiI YATR 4 cut(s) 129, 179, 282, 324
FatI CATG 1 cut(s) 177
FokI GGATG 3 cut(s) 68, 144, 309
FspBI CTAG 1 cut(s) 92
HaeIII GGCC 1 cut(s) 40
Hin1I GRCGYC 2 cut(s) 266, 308
Hin1II CATG 1 cut(s) 181
HinfI GANTC 3 cut(s) 136, 207, 225
Hpy166II GTNNAC 1 cut(s) 18
Hpy188I TCNGA 4 cut(s) 67, 75, 262, 304
Hpy188III TCNNGA 1 cut(s) 92
Hpy8I GTNNAC 1 cut(s) 18
Hpy99I CGWCG 2 cut(s) 271, 313
HpyCH4III ACNGT 2 cut(s) 163, 214
HpyCH4IV ACGT 2 cut(s) 266, 308
HpyCH4V TGCA 4 cut(s) 4, 18, 98, 159
HpyF10VI GCNNNNNNNGC 2 cut(s) 37, 165
HpyF3I CTNAG 1 cut(s) 48
HpySE526I ACGT 2 cut(s) 266, 308
Hsp92I GRCGYC 2 cut(s) 266, 308
Hsp92II CATG 1 cut(s) 181
LpnPI CCDG 3 cut(s) 22, 169, 266
LweI GCATC 1 cut(s) 85
MaeI CTAG 1 cut(s) 92
MaeII ACGT 2 cut(s) 266, 308
MboII GAAGA 2 cut(s) 283, 325
MhlI GDGCHC 1 cut(s) 20
MluCI AATT 1 cut(s) 86
MlyI GAGTC 2 cut(s) 201, 219
MnlI CCTC 3 cut(s) 51, 197, 215
MseI TTAA 1 cut(s) 119
MslI CAYNNNNRTG 2 cut(s) 25, 148
MwoI GCNNNNNNNGC 2 cut(s) 37, 165
NlaIII CATG 1 cut(s) 181
PcsI WCGNNNNNNNCGW 2 cut(s) 266, 308
PfeI GAWTC 1 cut(s) 136
PleI GAGTC 2 cut(s) 201, 219
PpsI GAGTC 2 cut(s) 201, 219
RseI CAYNNNNRTG 2 cut(s) 25, 148
SaqAI TTAA 1 cut(s) 119
SchI GAGTC 2 cut(s) 201, 219
SduI GDGCHC 1 cut(s) 20
SetI ASST 6 cut(s) 49, 117, 125, 196, 269, 311
SfaNI GCATC 1 cut(s) 85
SfcI CTRYAG 1 cut(s) 213
SgeI CNNG 7 cut(s) 49, 56, 104, 158, 168, 190, 265
SmiMI CAYNNNNRTG 2 cut(s) 25, 148
SmlI CTYRAG 1 cut(s) 42
SmoI CTYRAG 1 cut(s) 42
Sse9I AATT 1 cut(s) 86
SsiI CCGC 1 cut(s) 166
SspMI CTAG 1 cut(s) 92
TaaI ACNGT 2 cut(s) 163, 214
TaiI ACGT 2 cut(s) 269, 311
TaqI TCGA 2 cut(s) 269, 311
TasI AATT 1 cut(s) 86
TfiI GAWTC 1 cut(s) 136
Tru1I TTAA 1 cut(s) 119
Tru9I TTAA 1 cut(s) 119
TscAI CASTG 2 cut(s) 166, 217
TspRI CASTG 2 cut(s) 166, 217
VneI GTGCAC 1 cut(s) 16
XbaI TCTAGA 1 cut(s) 91
XspI CTAG 1 cut(s) 92
ZraI GACGTC 2 cut(s) 267, 309
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.