f-box protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g26000 |
| malus_domestica | MD01G1168200.v1.1 |
| prunus_persica | Prupe.2G264700_v2.0.a1 |
| pyrus_communis | pycom01g18120 |
| rosa_chinensis | RchiOBHm_Chr1g0372381 |
| rosa_laevigata | RLG00000026902 |
| rosa_multiflora | Rmu_sc0001755.1_g000005 Rmu_sc0032499.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00284990 |
| rosa_rugosa | Rorug01G0371400 |
| rosa_samantha | Rh1AG380100 Rh1BG343600 Rh1CG357100 Rh1DG374800 |
| rosa_wichuraiana | Rw1G033410 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 1295 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 822, 1305 |
| AccI | GTMKAC | 1 cut(s) | 479 |
| AccIII | TCCGGA | 1 cut(s) | 274 |
| AciI | CCGC | 6 cut(s) | 140, 671, 930, 989, 1373, 1471 |
| AclI | AACGTT | 2 cut(s) | 90, 504 |
| AclWI | GGATC | 4 cut(s) | 365, 634, 1127, 1154 |
| AcoI | YGGCCR | 2 cut(s) | 312, 453 |
| AcsI | RAATTY | 1 cut(s) | 1240 |
| AcvI | CACGTG | 1 cut(s) | 1412 |
| AcyI | GRCGYC | 1 cut(s) | 1296 |
| AfaI | GTAC | 2 cut(s) | 650, 1519 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 265, 441, 822, 841, 1305, 1352, 1369, 1426 |
| AflIII | ACRYGT | 3 cut(s) | 81, 210, 1279 |
| AgsI | TTSAA | 3 cut(s) | 1036, 1277, 1489 |
| AjnI | CCWGG | 5 cut(s) | 455, 775, 1007, 1019, 1150 |
| AluBI | AGCT | 5 cut(s) | 523, 658, 936, 1214, 1498 |
| AluI | AGCT | 5 cut(s) | 523, 658, 936, 1214, 1498 |
| Alw21I | GWGCWC | 3 cut(s) | 525, 1059, 1500 |
| Alw26I | GTCTC | 2 cut(s) | 324, 1310 |
| Alw44I | GTGCAC | 1 cut(s) | 1055 |
| AlwI | GGATC | 4 cut(s) | 365, 634, 1127, 1154 |
| Aor13HI | TCCGGA | 1 cut(s) | 274 |
| AoxI | GGCC | 4 cut(s) | 312, 453, 1446, 1525 |
| ApaLI | GTGCAC | 1 cut(s) | 1055 |
| ApeKI | GCWGC | 4 cut(s) | 307, 1309, 1458, 1461 |
| ApoI | RAATTY | 1 cut(s) | 1240 |
| AspLEI | GCGC | 2 cut(s) | 988, 1298 |
| AspS9I | GGNCC | 3 cut(s) | 772, 919, 1028 |
| AsuC2I | CCSGG | 1 cut(s) | 1347 |
| AsuHPI | GGTGA | 3 cut(s) | 280, 901, 991 |
| AsuII | TTCGAA | 1 cut(s) | 679 |
| AsuNHI | GCTAGC | 1 cut(s) | 932 |
| AvaII | GGWCC | 3 cut(s) | 772, 919, 1028 |
| AxyI | CCTNAGG | 1 cut(s) | 1529 |
| BaeGI | GKGCMC | 1 cut(s) | 1059 |
| BalI | TGGCCA | 1 cut(s) | 455 |
| BanI | GGYRCC | 1 cut(s) | 1295 |
| BanII | GRGCYC | 2 cut(s) | 525, 1500 |
| BbrPI | CACGTG | 1 cut(s) | 1412 |
| Bbv12I | GWGCWC | 3 cut(s) | 525, 1059, 1500 |
| BbvCI | CCTCAGC | 1 cut(s) | 963 |
| BbvI | GCAGC | 4 cut(s) | 294, 1296, 1470, 1473 |
| BccI | CCATC | 6 cut(s) | 212, 569, 757, 930, 1433, 1471 |
| BceAI | ACGGC | 2 cut(s) | 320, 619 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 390, 424 |
| BciT130I | CCWGG | 5 cut(s) | 457, 777, 1009, 1021, 1152 |
| BclI | TGATCA | 1 cut(s) | 1255 |
| BcnI | CCSGG | 1 cut(s) | 1347 |
| BcoDI | GTCTC | 2 cut(s) | 324, 1310 |
| BfaI | CTAG | 6 cut(s) | 65, 687, 933, 1062, 1377, 1482 |
| BfmI | CTRYAG | 1 cut(s) | 1310 |
| BfoI | RGCGCY | 1 cut(s) | 1299 |
| BisI | GCNGC | 6 cut(s) | 308, 989, 1310, 1374, 1459, 1462 |
| BlsI | GCNGC | 6 cut(s) | 309, 990, 1311, 1375, 1460, 1463 |
| Bme1390I | CCNGG | 6 cut(s) | 457, 777, 1009, 1021, 1152, 1347 |
| Bme18I | GGWCC | 3 cut(s) | 772, 919, 1028 |
| BmgT120I | GGNCC | 3 cut(s) | 772, 919, 1028 |
| BmiI | GGNNCC | 3 cut(s) | 774, 1297, 1390 |
| BmrFI | CCNGG | 6 cut(s) | 457, 777, 1009, 1021, 1152, 1347 |
| BmsI | GCATC | 3 cut(s) | 123, 326, 398 |
| BmtI | GCTAGC | 1 cut(s) | 936 |
| BpmI | CTGGAG | 2 cut(s) | 287, 416 |
| Bpu10I | CCTNAGC | 1 cut(s) | 963 |
| Bpu14I | TTCGAA | 1 cut(s) | 679 |
| BpuEI | CTTGAG | 1 cut(s) | 794 |
| BpuMI | CCSGG | 1 cut(s) | 1347 |
| BsaAI | YACGTR | 1 cut(s) | 1412 |
| BsaHI | GRCGYC | 1 cut(s) | 1296 |
| BsaJI | CCNNGG | 4 cut(s) | 350, 775, 1151, 1291 |
| BsaWI | WCCGGW | 2 cut(s) | 274, 1391 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1307, 1337 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 265, 441, 822, 841, 1305, 1352, 1369, 1426 |
| Bse118I | RCCGGY | 1 cut(s) | 310 |
| Bse21I | CCTNAGG | 1 cut(s) | 1529 |
| BseAI | TCCGGA | 1 cut(s) | 274 |
| BseBI | CCWGG | 5 cut(s) | 457, 777, 1009, 1021, 1152 |
| BseDI | CCNNGG | 4 cut(s) | 350, 775, 1151, 1291 |
| BseGI | GGATG | 6 cut(s) | 34, 294, 771, 1287, 1441, 1479 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 265, 441, 822, 841, 1305, 1352, 1369, 1426 |
| BseMII | CTCAG | 5 cut(s) | 876, 954, 1194, 1359, 1543 |
| BseRI | GAGGAG | 3 cut(s) | 533, 854, 980 |
| BseSI | GKGCMC | 1 cut(s) | 1059 |
| BseXI | GCAGC | 4 cut(s) | 294, 1296, 1470, 1473 |
| BseYI | CCCAGC | 1 cut(s) | 662 |
| BshFI | GGCC | 4 cut(s) | 314, 455, 1448, 1527 |
| BshNI | GGYRCC | 1 cut(s) | 1295 |
| BsiHKAI | GWGCWC | 3 cut(s) | 525, 1059, 1500 |
| BsiSI | CCGG | 4 cut(s) | 275, 311, 1346, 1392 |
| BslFI | GGGAC | 2 cut(s) | 368, 758 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 265, 441, 822, 841, 1305, 1352, 1369, 1426 |
| BsmAI | GTCTC | 2 cut(s) | 324, 1310 |
| BsmFI | GGGAC | 2 cut(s) | 368, 758 |
| BsmI | GAATGC | 1 cut(s) | 1540 |
| BsnI | GGCC | 4 cut(s) | 314, 455, 1448, 1527 |
| Bsp119I | TTCGAA | 1 cut(s) | 679 |
| Bsp1286I | GDGCHC | 3 cut(s) | 525, 1059, 1500 |
| Bsp13I | TCCGGA | 1 cut(s) | 274 |
| Bsp143I | GATC | 5 cut(s) | 370, 639, 1119, 1159, 1255 |
| Bsp19I | CCATGG | 1 cut(s) | 350 |
| BspACI | CCGC | 6 cut(s) | 140, 671, 930, 989, 1373, 1471 |
| BspANI | GGCC | 4 cut(s) | 314, 455, 1448, 1527 |
| BspCNI | CTCAG | 5 cut(s) | 877, 955, 1195, 1360, 1542 |
| BspEI | TCCGGA | 1 cut(s) | 274 |
| BspLI | GGNNCC | 3 cut(s) | 774, 1297, 1390 |
| BspMAI | CTGCAG | 1 cut(s) | 1314 |
| BspOI | GCTAGC | 1 cut(s) | 936 |
| BspPI | GGATC | 4 cut(s) | 365, 634, 1127, 1154 |
| BspT104I | TTCGAA | 1 cut(s) | 679 |
| BspT107I | GGYRCC | 1 cut(s) | 1295 |
| BsrFI | RCCGGY | 1 cut(s) | 310 |
| BssAI | RCCGGY | 1 cut(s) | 310 |
| BssECI | CCNNGG | 4 cut(s) | 350, 775, 1151, 1291 |
| BssMI | GATC | 5 cut(s) | 370, 639, 1119, 1159, 1255 |
| BssNI | GRCGYC | 1 cut(s) | 1296 |
| BssT1I | CCWWGG | 1 cut(s) | 350 |
| Bst2UI | CCWGG | 5 cut(s) | 457, 777, 1009, 1021, 1152 |
| Bst4CI | ACNGT | 3 cut(s) | 572, 648, 1522 |
| Bst6I | CTCTTC | 4 cut(s) | 217, 603, 1425, 1484 |
| BstACI | GRCGYC | 1 cut(s) | 1296 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1309 |
| BstBAI | YACGTR | 1 cut(s) | 1412 |
| BstBI | TTCGAA | 1 cut(s) | 679 |
| BstC8I | GCNNGC | 5 cut(s) | 312, 347, 513, 934, 1500 |
| BstDEI | CTNAG | 5 cut(s) | 885, 963, 1203, 1368, 1529 |
| BstDSI | CCRYGG | 2 cut(s) | 350, 1291 |
| BstF5I | GGATG | 6 cut(s) | 34, 294, 771, 1287, 1441, 1479 |
| BstH2I | RGCGCY | 1 cut(s) | 1299 |
| BstHHI | GCGC | 2 cut(s) | 988, 1298 |
| BstKTI | GATC | 5 cut(s) | 373, 642, 1122, 1162, 1258 |
| BstMAI | GTCTC | 2 cut(s) | 324, 1310 |
| BstMBI | GATC | 5 cut(s) | 370, 639, 1119, 1159, 1255 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1309 |
| BstNI | CCWGG | 5 cut(s) | 457, 777, 1009, 1021, 1152 |
| BstNSI | RCATGY | 2 cut(s) | 85, 1085 |
| BstSCI | CCNGG | 6 cut(s) | 455, 775, 1007, 1019, 1150, 1345 |
| BstSFI | CTRYAG | 1 cut(s) | 1310 |
| BstSLI | GKGCMC | 1 cut(s) | 1059 |
| BstV1I | GCAGC | 4 cut(s) | 294, 1296, 1470, 1473 |
| BstX2I | RGATCY | 2 cut(s) | 370, 1159 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 322, 1510 |
| BstYI | RGATCY | 2 cut(s) | 370, 1159 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1529 |
| BsuRI | GGCC | 4 cut(s) | 314, 455, 1448, 1527 |
| BtgI | CCRYGG | 2 cut(s) | 350, 1291 |
| BtsCI | GGATG | 6 cut(s) | 34, 294, 771, 1287, 1441, 1479 |
| BtsIMutI | CAGTG | 1 cut(s) | 568 |
| Cac8I | GCNNGC | 5 cut(s) | 312, 347, 513, 934, 1500 |
| CfoI | GCGC | 2 cut(s) | 988, 1298 |
| Cfr10I | RCCGGY | 1 cut(s) | 310 |
| Cfr13I | GGNCC | 3 cut(s) | 772, 919, 1028 |
| Csp6I | GTAC | 2 cut(s) | 649, 1518 |
| CviAII | CATG | 4 cut(s) | 82, 351, 1082, 1105 |
| CviQI | GTAC | 2 cut(s) | 649, 1518 |
| DdeI | CTNAG | 5 cut(s) | 885, 963, 1203, 1368, 1529 |
| DinI | GGCGCC | 1 cut(s) | 1297 |
| DpnI | GATC | 5 cut(s) | 372, 641, 1121, 1161, 1257 |
| DpnII | GATC | 5 cut(s) | 370, 639, 1119, 1159, 1255 |
| EaeI | YGGCCR | 2 cut(s) | 312, 453 |
| Eam1104I | CTCTTC | 4 cut(s) | 217, 603, 1425, 1484 |
| EarI | CTCTTC | 4 cut(s) | 217, 603, 1425, 1484 |
| Ecl136II | GAGCTC | 2 cut(s) | 523, 1498 |
| Eco130I | CCWWGG | 1 cut(s) | 350 |
| Eco24I | GRGCYC | 2 cut(s) | 525, 1500 |
| Eco32I | GATATC | 1 cut(s) | 283 |
| Eco47I | GGWCC | 3 cut(s) | 772, 919, 1028 |
| Eco53kI | GAGCTC | 2 cut(s) | 523, 1498 |
| Eco72I | CACGTG | 1 cut(s) | 1412 |
| Eco81I | CCTNAGG | 1 cut(s) | 1529 |
| EcoICRI | GAGCTC | 2 cut(s) | 523, 1498 |
| EcoO109I | RGGNCCY | 1 cut(s) | 772 |
| EcoRII | CCWGG | 5 cut(s) | 455, 775, 1007, 1019, 1150 |
| EcoRV | GATATC | 1 cut(s) | 283 |
| EcoT14I | CCWWGG | 1 cut(s) | 350 |
| EcoT38I | GRGCYC | 2 cut(s) | 525, 1500 |
| EgeI | GGCGCC | 1 cut(s) | 1297 |
| EheI | GGCGCC | 1 cut(s) | 1297 |
| ErhI | CCWWGG | 1 cut(s) | 350 |
| FaeI | CATG | 4 cut(s) | 85, 354, 1085, 1108 |
| FaqI | GGGAC | 2 cut(s) | 368, 758 |
| FatI | CATG | 4 cut(s) | 81, 350, 1081, 1104 |
| FauI | CCCGC | 1 cut(s) | 664 |
| FbaI | TGATCA | 1 cut(s) | 1255 |
| FblI | GTMKAC | 1 cut(s) | 479 |
| Fnu4HI | GCNGC | 6 cut(s) | 308, 989, 1310, 1374, 1459, 1462 |
| FokI | GGATG | 6 cut(s) | 41, 281, 778, 1274, 1448, 1486 |
| FriOI | GRGCYC | 2 cut(s) | 525, 1500 |
| Fsp4HI | GCNGC | 6 cut(s) | 308, 989, 1310, 1374, 1459, 1462 |
| FspBI | CTAG | 6 cut(s) | 65, 687, 933, 1062, 1377, 1482 |
| GlaI | GCGC | 2 cut(s) | 987, 1297 |
| GluI | GCNGC | 6 cut(s) | 308, 989, 1310, 1374, 1459, 1462 |
| GsaI | CCCAGC | 1 cut(s) | 666 |
| GsuI | CTGGAG | 2 cut(s) | 287, 416 |
| HaeII | RGCGCY | 1 cut(s) | 1299 |
| HaeIII | GGCC | 4 cut(s) | 314, 455, 1448, 1527 |
| HapII | CCGG | 4 cut(s) | 275, 311, 1346, 1392 |
| HhaI | GCGC | 2 cut(s) | 988, 1298 |
| Hin1I | GRCGYC | 1 cut(s) | 1296 |
| Hin1II | CATG | 4 cut(s) | 85, 354, 1085, 1108 |
| Hin6I | GCGC | 2 cut(s) | 986, 1296 |
| HinP1I | GCGC | 2 cut(s) | 986, 1296 |
| HpaII | CCGG | 4 cut(s) | 275, 311, 1346, 1392 |
| HphI | GGTGA | 3 cut(s) | 280, 901, 991 |
| Hpy166II | GTNNAC | 4 cut(s) | 480, 1057, 1285, 1360 |
| Hpy188I | TCNGA | 4 cut(s) | 335, 493, 743, 1143 |
| Hpy188III | TCNNGA | 6 cut(s) | 266, 275, 298, 395, 995, 1531 |
| Hpy8I | GTNNAC | 4 cut(s) | 480, 1057, 1285, 1360 |
| Hpy99I | CGWCG | 2 cut(s) | 605, 866 |
| HpyAV | CCTTC | 5 cut(s) | 388, 645, 763, 1030, 1059 |
| HpyCH4III | ACNGT | 3 cut(s) | 572, 648, 1522 |
| HpyCH4IV | ACGT | 6 cut(s) | 90, 210, 504, 558, 1279, 1411 |
| HpyCH4V | TGCA | 7 cut(s) | 345, 511, 762, 1057, 1081, 1312, 1538 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1309 |
| HpyF3I | CTNAG | 5 cut(s) | 885, 963, 1203, 1368, 1529 |
| HpySE526I | ACGT | 6 cut(s) | 90, 210, 504, 558, 1279, 1411 |
| Hsp92I | GRCGYC | 1 cut(s) | 1296 |
| Hsp92II | CATG | 4 cut(s) | 85, 354, 1085, 1108 |
| HspAI | GCGC | 2 cut(s) | 986, 1296 |
| KasI | GGCGCC | 1 cut(s) | 1295 |
| Kpn2I | TCCGGA | 1 cut(s) | 274 |
| KroI | GCCGGC | 1 cut(s) | 310 |
| KroNI | GCCGGC | 1 cut(s) | 312 |
| Ksp22I | TGATCA | 1 cut(s) | 1255 |
| Kzo9I | GATC | 5 cut(s) | 370, 639, 1119, 1159, 1255 |
| LmnI | GCTCC | 6 cut(s) | 397, 520, 1011, 1211, 1394, 1495 |
| Lsp1109I | GCAGC | 4 cut(s) | 294, 1296, 1470, 1473 |
| LweI | GCATC | 3 cut(s) | 123, 326, 398 |
| MaeI | CTAG | 6 cut(s) | 65, 687, 933, 1062, 1377, 1482 |
| MaeII | ACGT | 6 cut(s) | 90, 210, 504, 558, 1279, 1411 |
| MaeIII | GTNAC | 2 cut(s) | 566, 779 |
| MalI | GATC | 5 cut(s) | 372, 641, 1121, 1161, 1257 |
| MboI | GATC | 5 cut(s) | 370, 639, 1119, 1159, 1255 |
| MflI | RGATCY | 2 cut(s) | 370, 1159 |
| MhlI | GDGCHC | 3 cut(s) | 525, 1059, 1500 |
| MlsI | TGGCCA | 1 cut(s) | 455 |
| MluCI | AATT | 2 cut(s) | 624, 1240 |
| MluNI | TGGCCA | 1 cut(s) | 455 |
| Mly113I | GGCGCC | 1 cut(s) | 1296 |
| MlyI | GAGTC | 3 cut(s) | 350, 482, 1312 |
| MmeI | TCCRAC | 2 cut(s) | 34, 667 |
| Mox20I | TGGCCA | 1 cut(s) | 455 |
| MroI | TCCGGA | 1 cut(s) | 274 |
| MroNI | GCCGGC | 1 cut(s) | 310 |
| MscI | TGGCCA | 1 cut(s) | 455 |
| MseI | TTAA | 2 cut(s) | 540, 561 |
| MslI | CAYNNNNRTG | 2 cut(s) | 573, 1543 |
| Msp20I | TGGCCA | 1 cut(s) | 455 |
| MspI | CCGG | 4 cut(s) | 275, 311, 1346, 1392 |
| MspR9I | CCNGG | 6 cut(s) | 457, 777, 1009, 1021, 1152, 1347 |
| Mva1269I | GAATGC | 1 cut(s) | 1540 |
| MvaI | CCWGG | 5 cut(s) | 457, 777, 1009, 1021, 1152 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1309 |
| NaeI | GCCGGC | 1 cut(s) | 312 |
| NarI | GGCGCC | 1 cut(s) | 1296 |
| NciI | CCSGG | 1 cut(s) | 1347 |
| NcoI | CCATGG | 1 cut(s) | 350 |
| NdeII | GATC | 5 cut(s) | 370, 639, 1119, 1159, 1255 |
| NgoMIV | GCCGGC | 1 cut(s) | 310 |
| NheI | GCTAGC | 1 cut(s) | 932 |
| NlaIII | CATG | 4 cut(s) | 85, 354, 1085, 1108 |
| NlaIV | GGNNCC | 3 cut(s) | 774, 1297, 1390 |
| NmeAIII | GCCGAG | 1 cut(s) | 421 |
| NmuCI | GTSAC | 1 cut(s) | 566 |
| NspI | RCATGY | 2 cut(s) | 85, 1085 |
| NspV | TTCGAA | 1 cut(s) | 679 |
| PciI | ACATGT | 1 cut(s) | 81 |
| PctI | GAATGC | 1 cut(s) | 1540 |
| PdiI | GCCGGC | 1 cut(s) | 312 |
| PfeI | GAWTC | 7 cut(s) | 61, 184, 262, 271, 544, 1147, 1172 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 822, 1305 |
| PfoI | TCCNGGA | 1 cut(s) | 1007 |
| PkrI | GCNGC | 6 cut(s) | 309, 990, 1311, 1375, 1460, 1463 |
| PleI | GAGTC | 3 cut(s) | 350, 482, 1312 |
| PluTI | GGCGCC | 1 cut(s) | 1299 |
| PmaCI | CACGTG | 1 cut(s) | 1412 |
| PmlI | CACGTG | 1 cut(s) | 1412 |
| PpsI | GAGTC | 3 cut(s) | 350, 482, 1312 |
| Ppu21I | YACGTR | 1 cut(s) | 1412 |
| PpuMI | RGGWCCY | 1 cut(s) | 772 |
| PscI | ACATGT | 1 cut(s) | 81 |
| Psp124BI | GAGCTC | 2 cut(s) | 525, 1500 |
| Psp1406I | AACGTT | 2 cut(s) | 90, 504 |
| Psp5II | RGGWCCY | 1 cut(s) | 772 |
| Psp6I | CCWGG | 5 cut(s) | 455, 775, 1007, 1019, 1150 |
| PspCI | CACGTG | 1 cut(s) | 1412 |
| PspFI | CCCAGC | 1 cut(s) | 662 |
| PspGI | CCWGG | 5 cut(s) | 455, 775, 1007, 1019, 1150 |
| PspN4I | GGNNCC | 3 cut(s) | 774, 1297, 1390 |
| PspPI | GGNCC | 3 cut(s) | 772, 919, 1028 |
| PspPPI | RGGWCCY | 1 cut(s) | 772 |
| PstI | CTGCAG | 1 cut(s) | 1314 |
| PsuI | RGATCY | 2 cut(s) | 370, 1159 |
| RsaI | GTAC | 2 cut(s) | 650, 1519 |
| RsaNI | GTAC | 2 cut(s) | 649, 1518 |
| RseI | CAYNNNNRTG | 2 cut(s) | 573, 1543 |
| SacI | GAGCTC | 2 cut(s) | 525, 1500 |
| SaqAI | TTAA | 2 cut(s) | 540, 561 |
| SatI | GCNGC | 6 cut(s) | 308, 989, 1310, 1374, 1459, 1462 |
| Sau3AI | GATC | 5 cut(s) | 370, 639, 1119, 1159, 1255 |
| Sau96I | GGNCC | 3 cut(s) | 772, 919, 1028 |
| SchI | GAGTC | 3 cut(s) | 350, 482, 1312 |
| ScrFI | CCNGG | 6 cut(s) | 457, 777, 1009, 1021, 1152, 1347 |
| SduI | GDGCHC | 3 cut(s) | 525, 1059, 1500 |
| SfaNI | GCATC | 3 cut(s) | 123, 326, 398 |
| SfcI | CTRYAG | 1 cut(s) | 1310 |
| SfoI | GGCGCC | 1 cut(s) | 1297 |
| SfuI | TTCGAA | 1 cut(s) | 679 |
| SinI | GGWCC | 3 cut(s) | 772, 919, 1028 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 573, 1543 |
| SmlI | CTYRAG | 1 cut(s) | 809 |
| SmoI | CTYRAG | 1 cut(s) | 809 |
| Sse9I | AATT | 2 cut(s) | 624, 1240 |
| SsiI | CCGC | 6 cut(s) | 140, 671, 930, 989, 1373, 1471 |
| SspDI | GGCGCC | 1 cut(s) | 1295 |
| SspMI | CTAG | 6 cut(s) | 65, 687, 933, 1062, 1377, 1482 |
| SstI | GAGCTC | 2 cut(s) | 525, 1500 |
| StyD4I | CCNGG | 6 cut(s) | 455, 775, 1007, 1019, 1150, 1345 |
| StyI | CCWWGG | 1 cut(s) | 350 |
| TaaI | ACNGT | 3 cut(s) | 572, 648, 1522 |
| TaiI | ACGT | 6 cut(s) | 93, 213, 507, 561, 1282, 1414 |
| TaqI | TCGA | 7 cut(s) | 170, 187, 525, 638, 679, 864, 954 |
| TasI | AATT | 2 cut(s) | 624, 1240 |
| TatI | WGTACW | 1 cut(s) | 648 |
| TauI | GCSGC | 2 cut(s) | 991, 1376 |
| TfiI | GAWTC | 7 cut(s) | 61, 184, 262, 271, 544, 1147, 1172 |
| Tru1I | TTAA | 2 cut(s) | 540, 561 |
| Tru9I | TTAA | 2 cut(s) | 540, 561 |
| TscAI | CASTG | 1 cut(s) | 575 |
| TseFI | GTSAC | 1 cut(s) | 566 |
| TseI | GCWGC | 4 cut(s) | 307, 1309, 1458, 1461 |
| Tsp45I | GTSAC | 1 cut(s) | 566 |
| TspDTI | ATGAA | 4 cut(s) | 123, 252, 370, 782 |
| TspGWI | ACGGA | 2 cut(s) | 1152, 1280 |
| TspRI | CASTG | 1 cut(s) | 575 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 822, 1305 |
| VneI | GTGCAC | 1 cut(s) | 1055 |
| VpaK11BI | GGWCC | 3 cut(s) | 772, 919, 1028 |
| XapI | RAATTY | 1 cut(s) | 1240 |
| XceI | RCATGY | 2 cut(s) | 85, 1085 |
| XmiI | GTMKAC | 1 cut(s) | 479 |
| XspI | CTAG | 6 cut(s) | 65, 687, 933, 1062, 1377, 1482 |