Rmu_sc0001809.1_g000056

ER membrane protein complex

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001809.1
OG0011093
Physical Location & Seq
Reverse (-)
291607 .. 297788
6182 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3417 bp
atggccacgacgagcatggcggttagggcttctcttcttcttctactggtattcctatctctcgcaaatctcactctttctctttacgaagatcaagtcggcctcgtcgattggcaccaacaatatatagggaaagtgaaggacgcagtgtttcatactcaaaagagtgggcgaaagcgtgttgtggtgtccactgaagagaatgttatagcatcacttgatctccgacacggggagatattttggagacatgttctcgggagcaatgatgttgtcgatggaattgacatagcattgggaaaatatgtcattaccctttcgtctgaaggaagtattttgagagcatggaaccttccagatggtcagatggtgtggcaatcttttatagatggctcaggggcctcaaaatcattattaactgtcccgacaaatttgatcgtcaacaaggaaaatttgatccttgtttttggtaaagggtctctacatgctgtttctggcattgatggtgaggttctttggacaaaggattttgcagctgaaagtctagaggttcaacatattattcaacctgttggaagtgagggaatctatgtactaggatttgttggttcttcccagtttgatgcatatcagatcaatcctaagaacggagagatactgaagcacaatagtgtagcactttctggcggctattctggggaagcagggagcaatgatgttgtcgatggaattgacatagcattgggaaaatatgtcattaccctttcgtctgaaggaagtattttgagagcatggaaccttccagatggtcagatggtgtggcaatcttttatagatggctcaggggcctcaaaatcattattaactgtcccgacaaatttgatcgtcaacaaggaaaatttgatccttgtttttggtaaagggtctctacatgctgtttctggcattgatggtgaggttctttggacaaaggattttgcagctgaaagtctagaggttcaacatattattcaacctgttggaagtgaggcaatctatgtactaggatttgttggttcttcccagtttgatgcatatcagatcaatcctaagaacggagagatactgaagcacaatagtgcagcactttctggcggctattctggggaagcgatattggcttcgagtgacattcttgtgacattggatgcctctaggtcaaagttggtaggtataagctttcaggatggtgaacttaacttgcaacagacatccatatctaatatattgggggattcttctggaacaccagtactgttgtcttcaaaactaccaggaatgttttccgtaaagcttgatggaggagtgacactcataaaagtgactgtagaagccaagttggaggtgatggataaaataagtagtgtggcagctattagtgatgcaattccccttactgaaggtcaacaagctttcgcactagttcaacatggagatggtaagattcatctgacagtgaagcttagtcacgatctgagtggtgatttgctgaaggagagtatagttatggacaatcagagggggatggtgcataaggtttttataaacagttatatccggacagacagatccaatgggtttagggccttgattgtcatggaggatcattcacttttgttgttacaacaaggtgccattgtctggagtagggaggatggtcttgcctcaattgttgatgtactaacatcagaactacccgtggaaaaggaaggtgtatctgtagcaaaagttgaggaaaacctttttgagtggcttaagggacacctactgaagcttaagggaaccttaatgcttgcaagtgctgatgatgttgctgctatacaagagaggaggttaaaaagttctgaaaagagcaaactgacccgagaccataatggttttcggaagcttctcatagtacttacaagagcgggaaagctctttgccttgcacactggatatggacaagttgtctggtctctgttactgcctaatctgcgtaaatctgagtgcgagtttccgactggtttgaatatttatcagtggcaggtaccccatcatcacgcaatggatgaagatccatctatcctcataataggtcgatgtggacaaagttctgatgcaccaggtgttctgtctattgttgatgcatacactggcactgaaattaattcaatggatctcgtacattccatttcgcaagttattccactgccatttactgatacaacagaacagcgacttcatctactaatagatggaaaccagcatgcatatctatatccaagaacatccgaggccattgatatctttcaacgcgagttctcaaacatatactggtactcagttgagactaagaatggcattatcaaaggacatgtcttgaagagcaattgcatccaggaagttgtggacaactattgcttcgagtccagggatatatggtcaattgtgttcccatctgactcagaaaagatcattgcaacagtgacaagaaaaccaaatgaggtggttcacactcaagcaaaggttatagctgctgaagaagatctgatgtataagtatatatctaagaatctactctttgttgcaactgttgcacctaaaggcagtggtgcaattggaacagctaccccagaggagtcgtggttgactgtatatcttatcgatactgtaactggtcgtatattgcatcggatgacccatcatggtgcacagggacctgtccacgctgttttcagtgagaattgggttgtataccactactttaatcttagagcacacagatatgagatgtcagtcatagagatatatgatcagtcccgagcggacaataaggatgtttggaagctgattcttgggaaacataatctcacttcacctatttcttcatattcccgaccagaggttgtgacgaaatcacagtcttactttttcacgtattctgtaaaagcaatagatgtgacattgacagcaaagggtattacttcaaagcagcttcttattggtacaattggggatcaggttttggcacttgacaagcgatttttggatccccgtcgatcagtcaaccccacaccagctgagaaagaggaaggcattatacctctaacagattcattgccaataattcctcagtcctatgtgacacatgctctaagagttgaaggactccgaggcatagtgacagtacctgccaagctggagtcaacaacccttgtcttcgtatatggagtggatctgttttttactcaacttgcaccgtcaaggacctacgattcgctgaccgatgatttcagctatgcattgcttctcatcaccatcgttgcactcatagcagcaatctttgtaacctggattttatccgagaaaaaagaactacgagagaagtggaggtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1620 PQQ_2

Protein Analysis

1138

Amino Acids

125.18

Weight (kDa)

5.74

Isoelectric Point (pI)

31.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_EMC1_N PF25293 28 - 231 1.4e-82 EMC1 N-terminal beta-propeller domain
PQQ_2 PF13360 67 - 275 1.1e-09 Outer membrane protein assembly factor BamB
Beta-prop_EMC1_N PF25293 238 - 565 8.8e-95 EMC1 N-terminal beta-propeller domain
PQQ_2 PF13360 260 - 435 7.7e-07 Outer membrane protein assembly factor BamB
EMC1_C PF07774 920 - 1137 3.4e-68 ER membrane protein complex subunit 1, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011093)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G11560
fragaria_vesca FvH4_2g35850
malus_domestica MD08G1115900.v1.1 MD15G1095600.v1.1
prunus_persica Prupe.1G450600_v2.0.a1 Prupe.1G450600_v2.0.a1
pyrus_communis pycom08g09670 pycom08g09680 pycom15g08790
rosa_chinensis RchiOBHm_Chr6g0305971
rosa_laevigata RLG00000010841
rosa_multiflora Rmu_co8311943.1_g000001 Rmu_sc0001809.1_g000056
rosa_roxburghii Rroxscaffold_7G00162180
rosa_rugosa Rorug06G0345700
rosa_samantha Rh6AG457600 Rh6BG443500 Rh6CG471700 Rh6DG458100
rosa_wichuraiana Rw6G039920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1583
Acc36I ACCTGC 2 cut(s) 2056, 3220
Acc65I GGTACC 1 cut(s) 2068
AccB1I GGYRCC 3 cut(s) 114, 1670, 2068
AccB7I CCANNNNNTGG 1 cut(s) 1680
AccBSI CCGCTC 2 cut(s) 1949, 2846
AccI GTMKAC 1 cut(s) 2775
AccII CGCG 1 cut(s) 2337
AccIII TCCGGA 1 cut(s) 1596
AciI CCGC 5 cut(s) 20, 687, 1134, 1949, 2846
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 4 cut(s) 430, 451, 877, 898
AcuI CTGAAG 9 cut(s) 216, 345, 680, 792, 1127, 1458, 1550, 1829, 2580
AdeI CACNNNGTG 1 cut(s) 2147
AfiI CCNNNNNNNGG 5 cut(s) 232, 647, 1094, 1680, 2923
AflII CTTAAG 2 cut(s) 1793, 1814
AflIII ACRYGT 2 cut(s) 250, 2395
AhdI GACNNNNNGTC 1 cut(s) 1988
AhlI ACTAGT 1 cut(s) 1459
AjnI CCWGG 5 cut(s) 1312, 2143, 2418, 2450, 3371
AleI CACNNNNGTG 2 cut(s) 669, 1116
Alw21I GWGCWC 2 cut(s) 2734, 2800
Alw26I GTCTC 6 cut(s) 241, 483, 930, 1899, 2001, 2363
Alw44I GTGCAC 1 cut(s) 2730
AlwNI CAGNNNCTG 1 cut(s) 3212
Ama87I CYCGRG 3 cut(s) 257, 1902, 2841
Aor13HI TCCGGA 1 cut(s) 1596
AoxI GGCC 6 cut(s) 3, 100, 399, 846, 1623, 2316
ApaLI GTGCAC 1 cut(s) 2730
ApeKI GCWGC 8 cut(s) 533, 980, 1121, 1409, 1853, 2555, 3013, 3356
ApoI RAATTY 4 cut(s) 430, 451, 877, 898
ArsI GACNNNNNNTTYG 8 cut(s) 81, 113, 2382, 2414, 2927, 2959, 3280, 3312
AseI ATTAAT 1 cut(s) 2187
Asp700I GAANNNNTTC 1 cut(s) 1321
Asp718I GGTACC 1 cut(s) 2068
AspS9I GGNCC 5 cut(s) 399, 846, 1623, 2738, 3288
AsuHPI GGTGA 7 cut(s) 518, 965, 1241, 1396, 1532, 2889, 3328
AvaI CYCGRG 3 cut(s) 257, 1902, 2841
AvaII GGWCC 2 cut(s) 2738, 3288
BaeGI GKGCMC 1 cut(s) 2734
BalI TGGCCA 1 cut(s) 5
BamHI GGATCC 1 cut(s) 3070
BanI GGYRCC 3 cut(s) 114, 1670, 2068
BarI GAAGNNNNNNTAC 2 cut(s) 3105, 3137
BbsI GAAGAC 2 cut(s) 1293, 3232
Bbv12I GWGCWC 2 cut(s) 2734, 2800
BbvI GCAGC 8 cut(s) 545, 992, 1133, 1421, 1840, 2542, 3025, 3368
BciT130I CCWGG 5 cut(s) 1314, 2145, 2420, 2452, 3373
BclI TGATCA 1 cut(s) 2833
BcoDI GTCTC 6 cut(s) 241, 483, 930, 1899, 2001, 2363
BcuI ACTAGT 1 cut(s) 1459
BfaI CTAG 6 cut(s) 545, 596, 992, 1043, 1194, 1460
BfmI CTRYAG 2 cut(s) 1365, 1758
BfrI CTTAAG 2 cut(s) 1793, 1814
BfuAI ACCTGC 2 cut(s) 2056, 3220
BglII AGATCT 1 cut(s) 2566
BmcAI AGTACT 2 cut(s) 1293, 1938
Bme1390I CCNGG 5 cut(s) 1314, 2145, 2420, 2452, 3373
Bme18I GGWCC 2 cut(s) 2738, 3288
BmeRI GACNNNNNGTC 1 cut(s) 1988
BmeT110I CYCGRG 3 cut(s) 257, 1902, 2841
BmgT120I GGNCC 5 cut(s) 399, 846, 1623, 2738, 3288
BmrFI CCNGG 5 cut(s) 1314, 2145, 2420, 2452, 3373
BmrI ACTGGG 2 cut(s) 610, 1057
BmsI GCATC 9 cut(s) 221, 613, 1060, 1177, 1411, 2128, 2155, 2424, 2719
BmuI ACTGGG 2 cut(s) 610, 1057
BpiI GAAGAC 2 cut(s) 1293, 3232
BplI GAGNNNNNCTC 2 cut(s) 1335, 1367
BpmI CTGGAG 2 cut(s) 1702, 3242
Bpu10I CCTNAGC 2 cut(s) 394, 841
BpuEI CTTGAG 1 cut(s) 2523
Bsa29I ATCGAT 1 cut(s) 2685
BsaAI YACGTR 1 cut(s) 2958
BsaBI GATNNNNATC 3 cut(s) 627, 1074, 2094
BsaI GGTCTC 4 cut(s) 483, 930, 1899, 2001
BsaJI CCNNGG 4 cut(s) 1737, 2313, 2451, 3193
BsaWI WCCGGW 1 cut(s) 1596
BsaXI ACNNNNNCTCC 4 cut(s) 207, 237, 2651, 2681
Bsc4I CCNNNNNNNGG 5 cut(s) 232, 647, 1094, 1680, 2923
Bse1I ACTGG 9 cut(s) 51, 616, 1063, 1289, 1978, 2047, 2179, 2360, 2701
Bse3DI GCAATG 6 cut(s) 271, 718, 2091, 2496, 3137, 3323
Bse8I GATNNNNATC 3 cut(s) 627, 1074, 2094
BseAI TCCGGA 1 cut(s) 1596
BseBI CCWGG 5 cut(s) 1314, 2145, 2420, 2452, 3373
BseCI ATCGAT 1 cut(s) 2685
BseDI CCNNGG 4 cut(s) 1737, 2313, 2451, 3193
BseJI GATNNNNATC 3 cut(s) 627, 1074, 2094
BseLI CCNNNNNNNGG 5 cut(s) 232, 647, 1094, 1680, 2923
BseMI GCAATG 6 cut(s) 271, 718, 2091, 2496, 3137, 3323
BseMII CTCAG 8 cut(s) 408, 855, 1505, 2016, 2376, 2499, 3093, 3167
BseNI ACTGG 9 cut(s) 51, 616, 1063, 1289, 1978, 2047, 2179, 2360, 2701
BseRI GAGGAG 3 cut(s) 1356, 1882, 2672
BseSI GKGCMC 1 cut(s) 2734
BseXI GCAGC 8 cut(s) 545, 992, 1133, 1421, 1840, 2542, 3025, 3368
BsgI GTGCAG 1 cut(s) 1140
Bsh1236I CGCG 1 cut(s) 2337
BshFI GGCC 6 cut(s) 5, 102, 401, 848, 1625, 2318
BshNI GGYRCC 3 cut(s) 114, 1670, 2068
BshVI ATCGAT 1 cut(s) 2685
BsiHKAI GWGCWC 2 cut(s) 2734, 2800
BsiHKCI CYCGRG 3 cut(s) 257, 1902, 2841
BsiSI CCGG 1 cut(s) 1597
BslFI GGGAC 5 cut(s) 407, 854, 1812, 2751, 2824
BslI CCNNNNNNNGG 5 cut(s) 232, 647, 1094, 1680, 2923
BsmAI GTCTC 6 cut(s) 241, 483, 930, 1899, 2001, 2363
BsmFI GGGAC 5 cut(s) 407, 854, 1812, 2751, 2824
BsnI GGCC 6 cut(s) 5, 102, 401, 848, 1625, 2318
Bso31I GGTCTC 4 cut(s) 483, 930, 1899, 2001
BsoBI CYCGRG 3 cut(s) 257, 1902, 2841
Bsp1286I GDGCHC 2 cut(s) 2734, 2800
Bsp13I TCCGGA 1 cut(s) 1596
BspACI CCGC 5 cut(s) 20, 687, 1134, 1949, 2846
BspANI GGCC 6 cut(s) 5, 102, 401, 848, 1625, 2318
BspCNI CTCAG 8 cut(s) 407, 854, 1506, 2017, 2375, 2498, 3094, 3166
BspDI ATCGAT 1 cut(s) 2685
BspEI TCCGGA 1 cut(s) 1596
BspFNI CGCG 1 cut(s) 2337
BspMI ACCTGC 2 cut(s) 2056, 3220
BspQI GCTCTTC 1 cut(s) 2399
BspT107I GGYRCC 3 cut(s) 114, 1670, 2068
BspTI CTTAAG 2 cut(s) 1793, 1814
BspTNI GGTCTC 4 cut(s) 483, 930, 1899, 2001
BsrBI CCGCTC 2 cut(s) 1949, 2846
BsrDI GCAATG 6 cut(s) 271, 718, 2091, 2496, 3137, 3323
BsrI ACTGG 9 cut(s) 51, 616, 1063, 1289, 1978, 2047, 2179, 2360, 2701
BssECI CCNNGG 4 cut(s) 1737, 2313, 2451, 3193
BssNAI GTATAC 1 cut(s) 2776
Bst1107I GTATAC 1 cut(s) 2776
Bst2UI CCWGG 5 cut(s) 1314, 2145, 2420, 2452, 3373
Bst6I CTCTTC 3 cut(s) 39, 192, 2399
BstAFI CTTAAG 2 cut(s) 1793, 1814
BstAPI GCANNNNNTGC 1 cut(s) 2615
BstBAI YACGTR 1 cut(s) 2958
BstC8I GCNNGC 2 cut(s) 1833, 2289
BstDSI CCRYGG 1 cut(s) 1737
BstFNI CGCG 1 cut(s) 2337
BstMAI GTCTC 6 cut(s) 241, 483, 930, 1899, 2001, 2363
BstMWI GCNNNNNNNGC 5 cut(s) 26, 1157, 2014, 2615, 3353
BstNI CCWGG 5 cut(s) 1314, 2145, 2420, 2452, 3373
BstNSI RCATGY 6 cut(s) 254, 488, 935, 2291, 2399, 3173
BstSCI CCNGG 5 cut(s) 1312, 2143, 2418, 2450, 3371
BstSFI CTRYAG 2 cut(s) 1365, 1758
BstSLI GKGCMC 1 cut(s) 2734
BstUI CGCG 1 cut(s) 2337
BstV1I GCAGC 8 cut(s) 545, 992, 1133, 1421, 1840, 2542, 3025, 3368
BstV2I GAAGAC 2 cut(s) 1293, 3232
BstX2I RGATCY 6 cut(s) 1607, 2095, 2197, 2566, 3070, 3256
BstYI RGATCY 6 cut(s) 1607, 2095, 2197, 2566, 3070, 3256
BstZ17I GTATAC 1 cut(s) 2776
Bsu15I ATCGAT 1 cut(s) 2685
BsuRI GGCC 6 cut(s) 5, 102, 401, 848, 1625, 2318
BsuTUI ATCGAT 1 cut(s) 2685
BtgI CCRYGG 1 cut(s) 1737
BtsI GCAGTG 3 cut(s) 153, 2228, 2635
BveI ACCTGC 2 cut(s) 2056, 3220
Cac8I GCNNGC 2 cut(s) 1833, 2289
CaiI CAGNNNCTG 1 cut(s) 3212
Cfr13I GGNCC 5 cut(s) 399, 846, 1623, 2738, 3288
ClaI ATCGAT 1 cut(s) 2685
CseI GACGC 1 cut(s) 152
CsiI ACCWGGT 1 cut(s) 2143
CspCI CAANNNNNGTGG 2 cut(s) 2508, 2543
DraIII CACNNNGTG 1 cut(s) 2147
DriI GACNNNNNGTC 1 cut(s) 1988
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 3 cut(s) 39, 192, 2399
Eam1105I GACNNNNNGTC 1 cut(s) 1988
EarI CTCTTC 3 cut(s) 39, 192, 2399
Eco31I GGTCTC 4 cut(s) 483, 930, 1899, 2001
Eco32I GATATC 1 cut(s) 2326
Eco47I GGWCC 2 cut(s) 2738, 3288
Eco57I CTGAAG 9 cut(s) 216, 345, 680, 792, 1127, 1458, 1550, 1829, 2580
Eco88I CYCGRG 3 cut(s) 257, 1902, 2841
EcoO109I RGGNCCY 5 cut(s) 399, 846, 1623, 2738, 3288
EcoRII CCWGG 5 cut(s) 1312, 2143, 2418, 2450, 3371
EcoRV GATATC 1 cut(s) 2326
EcoT22I ATGCAT 5 cut(s) 628, 1075, 2170, 2293, 3325
FalI AAGNNNNNCTT 2 cut(s) 1808, 1840
FaqI GGGAC 5 cut(s) 407, 854, 1812, 2751, 2824
FauI CCCGC 1 cut(s) 1942
FbaI TGATCA 1 cut(s) 2833
FblI GTMKAC 1 cut(s) 2775
FspBI CTAG 6 cut(s) 545, 596, 992, 1043, 1194, 1460
GsuI CTGGAG 2 cut(s) 1702, 3242
HaeIII GGCC 6 cut(s) 5, 102, 401, 848, 1625, 2318
HapII CCGG 1 cut(s) 1597
HgaI GACGC 1 cut(s) 152
HincII GTYRAC 6 cut(s) 442, 889, 1445, 2670, 3088, 3228
HindII GTYRAC 6 cut(s) 442, 889, 1445, 2670, 3088, 3228
HindIII AAGCTT 6 cut(s) 1216, 1331, 1449, 1499, 1811, 1925
HpaII CCGG 1 cut(s) 1597
HphI GGTGA 7 cut(s) 518, 965, 1241, 1396, 1532, 2889, 3328
Hpy99I CGWCG 3 cut(s) 13, 110, 3081
HpyCH4IV ACGT 1 cut(s) 2957
HpyF10VI GCNNNNNNNGC 5 cut(s) 26, 1157, 2014, 2615, 3353
HpySE526I ACGT 1 cut(s) 2957
Kpn2I TCCGGA 1 cut(s) 1596
KpnI GGTACC 1 cut(s) 2072
Ksp22I TGATCA 1 cut(s) 2833
LguI GCTCTTC 1 cut(s) 2399
LmnI GCTCC 2 cut(s) 261, 708
Lsp1109I GCAGC 8 cut(s) 545, 992, 1133, 1421, 1840, 2542, 3025, 3368
LweI GCATC 9 cut(s) 221, 613, 1060, 1177, 1411, 2128, 2155, 2424, 2719
MabI ACCWGGT 1 cut(s) 2143
MaeI CTAG 6 cut(s) 545, 596, 992, 1043, 1194, 1460
MaeII ACGT 1 cut(s) 2957
MbiI CCGCTC 2 cut(s) 1949, 2846
MfeI CAATTG 5 cut(s) 1707, 2410, 2466, 2637, 3030
MflI RGATCY 6 cut(s) 1607, 2095, 2197, 2566, 3070, 3256
MhlI GDGCHC 2 cut(s) 2734, 2800
MlsI TGGCCA 1 cut(s) 5
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 5 cut(s) 2456, 2477, 2669, 3183, 3233
MmeI TCCRAC 5 cut(s) 250, 553, 1000, 1359, 2063
Mox20I TGGCCA 1 cut(s) 5
Mph1103I ATGCAT 5 cut(s) 628, 1075, 2170, 2293, 3325
MroI TCCGGA 1 cut(s) 1596
MroXI GAANNNNTTC 1 cut(s) 1321
MscI TGGCCA 1 cut(s) 5
MseI TTAA 9 cut(s) 416, 863, 1236, 1794, 1815, 1826, 1874, 2187, 2787
MslI CAYNNNNRTG 7 cut(s) 669, 1116, 1175, 1358, 1473, 2727, 2805
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 3 cut(s) 536, 983, 3101
MspCI CTTAAG 2 cut(s) 1793, 1814
MspI CCGG 1 cut(s) 1597
MspR9I CCNGG 5 cut(s) 1314, 2145, 2420, 2452, 3373
MunI CAATTG 5 cut(s) 1707, 2410, 2466, 2637, 3030
MvaI CCWGG 5 cut(s) 1314, 2145, 2420, 2452, 3373
MvnI CGCG 1 cut(s) 2337
MwoI GCNNNNNNNGC 5 cut(s) 26, 1157, 2014, 2615, 3353
NsiI ATGCAT 5 cut(s) 628, 1075, 2170, 2293, 3325
NspI RCATGY 6 cut(s) 254, 488, 935, 2291, 2399, 3173
OliI CACNNNNGTG 2 cut(s) 669, 1116
PaeI GCATGC 1 cut(s) 2291
PciI ACATGT 2 cut(s) 250, 2395
PciSI GCTCTTC 1 cut(s) 2399
PcsI WCGNNNNNNNCGW 1 cut(s) 105
PdmI GAANNNNTTC 1 cut(s) 1321
PfeI GAWTC 7 cut(s) 585, 1274, 1483, 2593, 2872, 3134, 3296
PflMI CCANNNNNTGG 1 cut(s) 1680
PfoI TCCNGGA 1 cut(s) 2418
PleI GAGTC 5 cut(s) 2455, 2477, 2668, 3183, 3232
PpsI GAGTC 5 cut(s) 2455, 2477, 2668, 3183, 3232
Ppu21I YACGTR 1 cut(s) 2958
PpuMI RGGWCCY 2 cut(s) 2738, 3288
PscI ACATGT 2 cut(s) 250, 2395
PshBI ATTAAT 1 cut(s) 2187
PsiI TTATAA 1 cut(s) 1583
Psp5II RGGWCCY 2 cut(s) 2738, 3288
Psp6I CCWGG 5 cut(s) 1312, 2143, 2418, 2450, 3371
PspGI CCWGG 5 cut(s) 1312, 2143, 2418, 2450, 3371
PspPI GGNCC 5 cut(s) 399, 846, 1623, 2738, 3288
PspPPI RGGWCCY 2 cut(s) 2738, 3288
PstNI CAGNNNCTG 1 cut(s) 3212
PsuI RGATCY 6 cut(s) 1607, 2095, 2197, 2566, 3070, 3256
PvuII CAGCTG 3 cut(s) 536, 983, 3101
RseI CAYNNNNRTG 7 cut(s) 669, 1116, 1175, 1358, 1473, 2727, 2805
SapI GCTCTTC 1 cut(s) 2399
SaqAI TTAA 9 cut(s) 416, 863, 1236, 1794, 1815, 1826, 1874, 2187, 2787
Sau96I GGNCC 5 cut(s) 399, 846, 1623, 2738, 3288
ScaI AGTACT 2 cut(s) 1293, 1938
SchI GAGTC 5 cut(s) 2456, 2477, 2669, 3183, 3233
ScrFI CCNGG 5 cut(s) 1314, 2145, 2420, 2452, 3373
SduI GDGCHC 2 cut(s) 2734, 2800
SexAI ACCWGGT 1 cut(s) 2143
SfaNI GCATC 9 cut(s) 221, 613, 1060, 1177, 1411, 2128, 2155, 2424, 2719
SfcI CTRYAG 2 cut(s) 1365, 1758
SinI GGWCC 2 cut(s) 2738, 3288
SmiMI CAYNNNNRTG 7 cut(s) 669, 1116, 1175, 1358, 1473, 2727, 2805
SmlI CTYRAG 3 cut(s) 1793, 1814, 2538
SmoI CTYRAG 3 cut(s) 1793, 1814, 2538
SpeI ACTAGT 1 cut(s) 1459
SphI GCATGC 1 cut(s) 2291
SsiI CCGC 5 cut(s) 20, 687, 1134, 1949, 2846
SspI AATATT 1 cut(s) 2053
SspMI CTAG 6 cut(s) 545, 596, 992, 1043, 1194, 1460
StyD4I CCNGG 5 cut(s) 1312, 2143, 2418, 2450, 3371
TaiI ACGT 1 cut(s) 2960
TaqI TCGA 8 cut(s) 108, 276, 723, 1163, 2119, 2445, 2685, 3079
TaqII GACCGA 1 cut(s) 3320
TatI WGTACW 5 cut(s) 592, 1039, 1291, 1717, 1936
TauI GCSGC 2 cut(s) 690, 1137
TfiI GAWTC 7 cut(s) 585, 1274, 1483, 2593, 2872, 3134, 3296
Tru1I TTAA 9 cut(s) 416, 863, 1236, 1794, 1815, 1826, 1874, 2187, 2787
Tru9I TTAA 9 cut(s) 416, 863, 1236, 1794, 1815, 1826, 1874, 2187, 2787
TseI GCWGC 8 cut(s) 533, 980, 1121, 1409, 1853, 2555, 3013, 3356
TspDTI ATGAA 6 cut(s) 143, 1475, 2106, 2252, 2898, 3126
TspGWI ACGGA 3 cut(s) 663, 1110, 1315
Van91I CCANNNNNTGG 1 cut(s) 1680
Vha464I CTTAAG 2 cut(s) 1793, 1814
VneI GTGCAC 1 cut(s) 2730
VpaK11BI GGWCC 2 cut(s) 2738, 3288
VspI ATTAAT 1 cut(s) 2187
XapI RAATTY 4 cut(s) 430, 451, 877, 898
XbaI TCTAGA 2 cut(s) 544, 991
XceI RCATGY 6 cut(s) 254, 488, 935, 2291, 2399, 3173
XcmI CCANNNNNNNNNTGG 2 cut(s) 13, 2661
XmiI GTMKAC 1 cut(s) 2775
XmnI GAANNNNTTC 1 cut(s) 1321
XspI CTAG 6 cut(s) 545, 596, 992, 1043, 1194, 1460
ZrmI AGTACT 2 cut(s) 1293, 1938
Zsp2I ATGCAT 5 cut(s) 628, 1075, 2170, 2293, 3325
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.