Belongs to the GRAS family
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g21170 |
| malus_domestica | MD05G1194300.v1.1 MD10G1181000.v1.1 |
| prunus_persica | Prupe.8G220900_v2.0.a1 |
| pyrus_communis | pycom10g15680 |
| rosa_chinensis | RchiOBHm_Chr6g0287671 |
| rosa_laevigata | RLG00000012475 |
| rosa_multiflora | Rmu_sc0001813.1_g000002 |
| rosa_roxburghii | Rroxscaffold_7G00181300 |
| rosa_rugosa | Rorug06G0190500 |
| rosa_samantha | Rh6AG301000 Rh6CG302800 Rh6CG314900 Rh6DG298400 |
| rosa_wichuraiana | Rw6G025970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1410 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1130 |
| AccB1I | GGYRCC | 1 cut(s) | 833 |
| AccBSI | CCGCTC | 1 cut(s) | 1278 |
| AccII | CGCG | 2 cut(s) | 524, 531 |
| AccIII | TCCGGA | 1 cut(s) | 245 |
| AciI | CCGC | 7 cut(s) | 183, 434, 524, 712, 967, 1263, 1278 |
| AclWI | GGATC | 2 cut(s) | 37, 225 |
| AcoI | YGGCCR | 1 cut(s) | 764 |
| AcsI | RAATTY | 4 cut(s) | 11, 877, 929, 1354 |
| AcyI | GRCGYC | 1 cut(s) | 834 |
| AfaI | GTAC | 3 cut(s) | 224, 816, 849 |
| AfeI | AGCGCT | 1 cut(s) | 301 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 463, 721, 1403, 1479 |
| AflIII | ACRYGT | 2 cut(s) | 811, 1386 |
| AgeI | ACCGGT | 1 cut(s) | 824 |
| AgsI | TTSAA | 9 cut(s) | 17, 574, 635, 876, 954, 1155, 1175, 1217, 1384 |
| AhlI | ACTAGT | 1 cut(s) | 1457 |
| AjnI | CCWGG | 2 cut(s) | 272, 884 |
| AleI | CACNNNNGTG | 2 cut(s) | 714, 1082 |
| AluBI | AGCT | 7 cut(s) | 340, 371, 388, 487, 1224, 1312, 1329 |
| AluI | AGCT | 7 cut(s) | 340, 371, 388, 487, 1224, 1312, 1329 |
| Alw21I | GWGCWC | 4 cut(s) | 135, 489, 729, 1314 |
| Alw26I | GTCTC | 2 cut(s) | 851, 971 |
| Alw44I | GTGCAC | 1 cut(s) | 725 |
| AlwI | GGATC | 2 cut(s) | 37, 225 |
| Ama87I | CYCGRG | 4 cut(s) | 482, 854, 1066, 1313 |
| Aor13HI | TCCGGA | 1 cut(s) | 245 |
| Aor51HI | AGCGCT | 1 cut(s) | 301 |
| AoxI | GGCC | 6 cut(s) | 498, 512, 552, 764, 803, 1265 |
| ApaLI | GTGCAC | 1 cut(s) | 725 |
| ApeKI | GCWGC | 2 cut(s) | 203, 340 |
| ApoI | RAATTY | 4 cut(s) | 11, 877, 929, 1354 |
| AsiGI | ACCGGT | 1 cut(s) | 824 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 21, 705 |
| AspLEI | GCGC | 5 cut(s) | 302, 524, 531, 836, 1372 |
| AspS9I | GGNCC | 5 cut(s) | 512, 803, 1025, 1123, 1265 |
| AsuC2I | CCSGG | 2 cut(s) | 214, 459 |
| AsuHPI | GGTGA | 3 cut(s) | 481, 701, 947 |
| AsuII | TTCGAA | 1 cut(s) | 426 |
| AsuNHI | GCTAGC | 1 cut(s) | 1319 |
| AvaI | CYCGRG | 4 cut(s) | 482, 854, 1066, 1313 |
| AvaII | GGWCC | 2 cut(s) | 1025, 1123 |
| BaeGI | GKGCMC | 1 cut(s) | 729 |
| BalI | TGGCCA | 1 cut(s) | 766 |
| BanI | GGYRCC | 1 cut(s) | 833 |
| BanII | GRGCYC | 3 cut(s) | 489, 1115, 1314 |
| BauI | CACGAG | 2 cut(s) | 577, 922 |
| BbsI | GAAGAC | 1 cut(s) | 1290 |
| Bbv12I | GWGCWC | 4 cut(s) | 135, 489, 729, 1314 |
| BbvCI | CCTCAGC | 1 cut(s) | 1474 |
| BbvI | GCAGC | 2 cut(s) | 215, 327 |
| BccI | CCATC | 5 cut(s) | 490, 523, 701, 1354, 1421 |
| BceAI | ACGGC | 3 cut(s) | 301, 490, 699 |
| BciT130I | CCWGG | 2 cut(s) | 274, 886 |
| BciVI | GTATCC | 1 cut(s) | 1447 |
| BcnI | CCSGG | 2 cut(s) | 214, 459 |
| BcoDI | GTCTC | 2 cut(s) | 851, 971 |
| BcuI | ACTAGT | 1 cut(s) | 1457 |
| BfaI | CTAG | 6 cut(s) | 372, 584, 944, 1320, 1398, 1458 |
| BfmI | CTRYAG | 3 cut(s) | 201, 981, 998 |
| BfoI | RGCGCY | 2 cut(s) | 303, 837 |
| BfuI | GTATCC | 1 cut(s) | 1447 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 511 |
| BisI | GCNGC | 2 cut(s) | 204, 341 |
| BlsI | GCNGC | 2 cut(s) | 205, 342 |
| BmcAI | AGTACT | 1 cut(s) | 224 |
| Bme1390I | CCNGG | 4 cut(s) | 214, 274, 459, 886 |
| Bme18I | GGWCC | 2 cut(s) | 1025, 1123 |
| BmeT110I | CYCGRG | 4 cut(s) | 482, 854, 1066, 1313 |
| BmgT120I | GGNCC | 5 cut(s) | 512, 803, 1025, 1123, 1265 |
| BmiI | GGNNCC | 2 cut(s) | 835, 1027 |
| BmrFI | CCNGG | 4 cut(s) | 214, 274, 459, 886 |
| BmrI | ACTGGG | 2 cut(s) | 902, 1182 |
| BmsI | GCATC | 2 cut(s) | 465, 1006 |
| BmtI | GCTAGC | 1 cut(s) | 1323 |
| BmuI | ACTGGG | 2 cut(s) | 902, 1182 |
| BpiI | GAAGAC | 1 cut(s) | 1290 |
| BpmI | CTGGAG | 1 cut(s) | 1054 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1474 |
| Bpu14I | TTCGAA | 1 cut(s) | 426 |
| BpuEI | CTTGAG | 1 cut(s) | 1350 |
| BpuMI | CCSGG | 2 cut(s) | 214, 459 |
| Bsa29I | ATCGAT | 1 cut(s) | 153 |
| BsaAI | YACGTR | 1 cut(s) | 814 |
| BsaHI | GRCGYC | 1 cut(s) | 834 |
| BsaI | GGTCTC | 1 cut(s) | 851 |
| BsaJI | CCNNGG | 5 cut(s) | 213, 272, 447, 457, 549 |
| BsaWI | WCCGGW | 3 cut(s) | 245, 824, 860 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 966, 996 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 463, 721, 1403, 1479 |
| Bse118I | RCCGGY | 1 cut(s) | 824 |
| Bse1I | ACTGG | 3 cut(s) | 897, 1037, 1188 |
| Bse3DI | GCAATG | 1 cut(s) | 767 |
| BseAI | TCCGGA | 1 cut(s) | 245 |
| BseBI | CCWGG | 2 cut(s) | 274, 886 |
| BseCI | ATCGAT | 1 cut(s) | 153 |
| BseDI | CCNNGG | 5 cut(s) | 213, 272, 447, 457, 549 |
| BseGI | GGATG | 6 cut(s) | 209, 228, 480, 515, 693, 913 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 463, 721, 1403, 1479 |
| BseMI | GCAATG | 1 cut(s) | 767 |
| BseMII | CTCAG | 3 cut(s) | 134, 834, 1488 |
| BseNI | ACTGG | 3 cut(s) | 897, 1037, 1188 |
| BseRI | GAGGAG | 1 cut(s) | 1318 |
| BseSI | GKGCMC | 1 cut(s) | 729 |
| BseXI | GCAGC | 2 cut(s) | 215, 327 |
| Bsh1236I | CGCG | 2 cut(s) | 524, 531 |
| BshFI | GGCC | 6 cut(s) | 500, 514, 554, 766, 805, 1267 |
| BshNI | GGYRCC | 1 cut(s) | 833 |
| BshTI | ACCGGT | 1 cut(s) | 824 |
| BshVI | ATCGAT | 1 cut(s) | 153 |
| BsiHKAI | GWGCWC | 4 cut(s) | 135, 489, 729, 1314 |
| BsiHKCI | CYCGRG | 4 cut(s) | 482, 854, 1066, 1313 |
| BsiSI | CCGG | 6 cut(s) | 164, 213, 246, 459, 825, 861 |
| BsiWI | CGTACG | 1 cut(s) | 814 |
| BslFI | GGGAC | 2 cut(s) | 43, 1444 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 463, 721, 1403, 1479 |
| BsmAI | GTCTC | 2 cut(s) | 851, 971 |
| BsmFI | GGGAC | 2 cut(s) | 43, 1444 |
| BsmI | GAATGC | 1 cut(s) | 618 |
| BsnI | GGCC | 6 cut(s) | 500, 514, 554, 766, 805, 1267 |
| Bso31I | GGTCTC | 1 cut(s) | 851 |
| BsoBI | CYCGRG | 4 cut(s) | 482, 854, 1066, 1313 |
| Bsp119I | TTCGAA | 1 cut(s) | 426 |
| Bsp1286I | GDGCHC | 5 cut(s) | 135, 489, 729, 1115, 1314 |
| Bsp13I | TCCGGA | 1 cut(s) | 245 |
| Bsp143I | GATC | 4 cut(s) | 42, 112, 217, 304 |
| BspACI | CCGC | 7 cut(s) | 183, 434, 524, 712, 967, 1263, 1278 |
| BspANI | GGCC | 6 cut(s) | 500, 514, 554, 766, 805, 1267 |
| BspCNI | CTCAG | 3 cut(s) | 133, 835, 1487 |
| BspDI | ATCGAT | 1 cut(s) | 153 |
| BspEI | TCCGGA | 1 cut(s) | 245 |
| BspFNI | CGCG | 2 cut(s) | 524, 531 |
| BspLI | GGNNCC | 2 cut(s) | 835, 1027 |
| BspMAI | CTGCAG | 1 cut(s) | 205 |
| BspOI | GCTAGC | 1 cut(s) | 1323 |
| BspPI | GGATC | 2 cut(s) | 37, 225 |
| BspT104I | TTCGAA | 1 cut(s) | 426 |
| BspT107I | GGYRCC | 1 cut(s) | 833 |
| BspTNI | GGTCTC | 1 cut(s) | 851 |
| BsrBI | CCGCTC | 1 cut(s) | 1278 |
| BsrDI | GCAATG | 1 cut(s) | 767 |
| BsrFI | RCCGGY | 1 cut(s) | 824 |
| BsrI | ACTGG | 3 cut(s) | 897, 1037, 1188 |
| BssAI | RCCGGY | 1 cut(s) | 824 |
| BssECI | CCNNGG | 5 cut(s) | 213, 272, 447, 457, 549 |
| BssMI | GATC | 4 cut(s) | 42, 112, 217, 304 |
| BssNI | GRCGYC | 1 cut(s) | 834 |
| BssSI | CACGAG | 2 cut(s) | 577, 922 |
| BssT1I | CCWWGG | 1 cut(s) | 549 |
| Bst2BI | CACGAG | 2 cut(s) | 577, 922 |
| Bst2UI | CCWGG | 2 cut(s) | 274, 886 |
| Bst4CI | ACNGT | 4 cut(s) | 34, 237, 982, 1127 |
| Bst6I | CTCTTC | 1 cut(s) | 423 |
| BstACI | GRCGYC | 1 cut(s) | 834 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 545, 757 |
| BstBAI | YACGTR | 1 cut(s) | 814 |
| BstBI | TTCGAA | 1 cut(s) | 426 |
| BstC8I | GCNNGC | 6 cut(s) | 105, 109, 768, 1265, 1269, 1321 |
| BstDEI | CTNAG | 3 cut(s) | 120, 843, 1474 |
| BstDSI | CCRYGG | 1 cut(s) | 447 |
| BstEII | GGTNACC | 1 cut(s) | 935 |
| BstF5I | GGATG | 6 cut(s) | 209, 228, 480, 515, 693, 913 |
| BstFNI | CGCG | 2 cut(s) | 524, 531 |
| BstH2I | RGCGCY | 2 cut(s) | 303, 837 |
| BstHHI | GCGC | 5 cut(s) | 302, 524, 531, 836, 1372 |
| BstKTI | GATC | 4 cut(s) | 45, 115, 220, 307 |
| BstMAI | GTCTC | 2 cut(s) | 851, 971 |
| BstMBI | GATC | 4 cut(s) | 42, 112, 217, 304 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 394, 484, 511, 528, 545, 757 |
| BstNI | CCWGG | 2 cut(s) | 274, 886 |
| BstNSI | RCATGY | 1 cut(s) | 1390 |
| BstPI | GGTNACC | 1 cut(s) | 935 |
| BstSCI | CCNGG | 4 cut(s) | 212, 272, 457, 884 |
| BstSFI | CTRYAG | 3 cut(s) | 201, 981, 998 |
| BstSLI | GKGCMC | 1 cut(s) | 729 |
| BstUI | CGCG | 2 cut(s) | 524, 531 |
| BstV1I | GCAGC | 2 cut(s) | 215, 327 |
| BstV2I | GAAGAC | 1 cut(s) | 1290 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 796, 892 |
| Bsu15I | ATCGAT | 1 cut(s) | 153 |
| BsuI | GTATCC | 1 cut(s) | 1447 |
| BsuRI | GGCC | 6 cut(s) | 500, 514, 554, 766, 805, 1267 |
| BsuTUI | ATCGAT | 1 cut(s) | 153 |
| BtgI | CCRYGG | 1 cut(s) | 447 |
| BtgZI | GCGATG | 1 cut(s) | 769 |
| BtsCI | GGATG | 6 cut(s) | 209, 228, 480, 515, 693, 913 |
| BtsI | GCAGTG | 3 cut(s) | 198, 332, 993 |
| BtsIMutI | CAGTG | 5 cut(s) | 128, 198, 332, 993, 1195 |
| Cac8I | GCNNGC | 6 cut(s) | 105, 109, 768, 1265, 1269, 1321 |
| CfoI | GCGC | 5 cut(s) | 302, 524, 531, 836, 1372 |
| Cfr10I | RCCGGY | 1 cut(s) | 824 |
| Cfr13I | GGNCC | 5 cut(s) | 512, 803, 1025, 1123, 1265 |
| ClaI | ATCGAT | 1 cut(s) | 153 |
| Csp6I | GTAC | 3 cut(s) | 223, 815, 848 |
| CspAI | ACCGGT | 1 cut(s) | 824 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 429, 464 |
| CviQI | GTAC | 3 cut(s) | 223, 815, 848 |
| DdeI | CTNAG | 3 cut(s) | 120, 843, 1474 |
| DinI | GGCGCC | 1 cut(s) | 835 |
| DpnI | GATC | 4 cut(s) | 44, 114, 219, 306 |
| DpnII | GATC | 4 cut(s) | 42, 112, 217, 304 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1130 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1130 |
| EaeI | YGGCCR | 1 cut(s) | 764 |
| Eam1104I | CTCTTC | 1 cut(s) | 423 |
| EarI | CTCTTC | 1 cut(s) | 423 |
| Ecl136II | GAGCTC | 2 cut(s) | 487, 1312 |
| Eco130I | CCWWGG | 1 cut(s) | 549 |
| Eco24I | GRGCYC | 3 cut(s) | 489, 1115, 1314 |
| Eco31I | GGTCTC | 1 cut(s) | 851 |
| Eco32I | GATATC | 1 cut(s) | 745 |
| Eco47I | GGWCC | 2 cut(s) | 1025, 1123 |
| Eco47III | AGCGCT | 1 cut(s) | 301 |
| Eco53kI | GAGCTC | 2 cut(s) | 487, 1312 |
| Eco88I | CYCGRG | 4 cut(s) | 482, 854, 1066, 1313 |
| Eco91I | GGTNACC | 1 cut(s) | 935 |
| EcoICRI | GAGCTC | 2 cut(s) | 487, 1312 |
| EcoO109I | RGGNCCY | 2 cut(s) | 803, 1025 |
| EcoO65I | GGTNACC | 1 cut(s) | 935 |
| EcoRII | CCWGG | 2 cut(s) | 272, 884 |
| EcoRV | GATATC | 1 cut(s) | 745 |
| EcoT14I | CCWWGG | 1 cut(s) | 549 |
| EcoT38I | GRGCYC | 3 cut(s) | 489, 1115, 1314 |
| EgeI | GGCGCC | 1 cut(s) | 835 |
| EheI | GGCGCC | 1 cut(s) | 835 |
| ErhI | CCWWGG | 1 cut(s) | 549 |
| FaqI | GGGAC | 2 cut(s) | 43, 1444 |
| FauI | CCCGC | 1 cut(s) | 1256 |
| Fnu4HI | GCNGC | 2 cut(s) | 204, 341 |
| FokI | GGATG | 6 cut(s) | 196, 215, 487, 502, 680, 900 |
| FriOI | GRGCYC | 3 cut(s) | 489, 1115, 1314 |
| Fsp4HI | GCNGC | 2 cut(s) | 204, 341 |
| FspBI | CTAG | 6 cut(s) | 372, 584, 944, 1320, 1398, 1458 |
| GlaI | GCGC | 5 cut(s) | 301, 523, 530, 835, 1371 |
| GluI | GCNGC | 2 cut(s) | 204, 341 |
| GsuI | CTGGAG | 1 cut(s) | 1054 |
| HaeII | RGCGCY | 2 cut(s) | 303, 837 |
| HaeIII | GGCC | 6 cut(s) | 500, 514, 554, 766, 805, 1267 |
| HapII | CCGG | 6 cut(s) | 164, 213, 246, 459, 825, 861 |
| HhaI | GCGC | 5 cut(s) | 302, 524, 531, 836, 1372 |
| Hin1I | GRCGYC | 1 cut(s) | 834 |
| Hin6I | GCGC | 5 cut(s) | 300, 522, 529, 834, 1370 |
| HinP1I | GCGC | 5 cut(s) | 300, 522, 529, 834, 1370 |
| HincII | GTYRAC | 1 cut(s) | 607 |
| HindII | GTYRAC | 1 cut(s) | 607 |
| HindIII | AAGCTT | 1 cut(s) | 386 |
| HinfI | GANTC | 2 cut(s) | 1071, 1166 |
| HpaII | CCGG | 6 cut(s) | 164, 213, 246, 459, 825, 861 |
| HphI | GGTGA | 3 cut(s) | 481, 701, 947 |
| Hpy166II | GTNNAC | 2 cut(s) | 607, 727 |
| Hpy188I | TCNGA | 3 cut(s) | 261, 474, 844 |
| Hpy188III | TCNNGA | 5 cut(s) | 246, 856, 922, 1172, 1503 |
| Hpy8I | GTNNAC | 2 cut(s) | 607, 727 |
| Hpy99I | CGWCG | 1 cut(s) | 293 |
| HpyAV | CCTTC | 2 cut(s) | 794, 1444 |
| HpyCH4III | ACNGT | 4 cut(s) | 34, 237, 982, 1127 |
| HpyCH4IV | ACGT | 1 cut(s) | 813 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 394, 484, 511, 528, 545, 757 |
| HpyF3I | CTNAG | 3 cut(s) | 120, 843, 1474 |
| HpySE526I | ACGT | 1 cut(s) | 813 |
| Hsp92I | GRCGYC | 1 cut(s) | 834 |
| HspAI | GCGC | 5 cut(s) | 300, 522, 529, 834, 1370 |
| KasI | GGCGCC | 1 cut(s) | 833 |
| Kpn2I | TCCGGA | 1 cut(s) | 245 |
| Kzo9I | GATC | 4 cut(s) | 42, 112, 217, 304 |
| LmnI | GCTCC | 3 cut(s) | 526, 1087, 1275 |
| Lsp1109I | GCAGC | 2 cut(s) | 215, 327 |
| LweI | GCATC | 2 cut(s) | 465, 1006 |
| MaeI | CTAG | 6 cut(s) | 372, 584, 944, 1320, 1398, 1458 |
| MaeII | ACGT | 1 cut(s) | 813 |
| MaeIII | GTNAC | 4 cut(s) | 237, 716, 935, 1075 |
| MalI | GATC | 4 cut(s) | 44, 114, 219, 306 |
| MbiI | CCGCTC | 1 cut(s) | 1278 |
| MboI | GATC | 4 cut(s) | 42, 112, 217, 304 |
| MboII | GAAGA | 3 cut(s) | 410, 1067, 1295 |
| MhlI | GDGCHC | 5 cut(s) | 135, 489, 729, 1115, 1314 |
| MlsI | TGGCCA | 1 cut(s) | 766 |
| MluCI | AATT | 7 cut(s) | 11, 61, 73, 411, 877, 929, 1354 |
| MluNI | TGGCCA | 1 cut(s) | 766 |
| Mly113I | GGCGCC | 1 cut(s) | 834 |
| MmeI | TCCRAC | 2 cut(s) | 70, 708 |
| Mox20I | TGGCCA | 1 cut(s) | 766 |
| MroI | TCCGGA | 1 cut(s) | 245 |
| MroXI | GAANNNNTTC | 2 cut(s) | 21, 705 |
| MscI | TGGCCA | 1 cut(s) | 766 |
| MseI | TTAA | 4 cut(s) | 69, 87, 404, 642 |
| MslI | CAYNNNNRTG | 5 cut(s) | 494, 714, 794, 953, 1082 |
| Msp20I | TGGCCA | 1 cut(s) | 766 |
| MspI | CCGG | 6 cut(s) | 164, 213, 246, 459, 825, 861 |
| MspR9I | CCNGG | 4 cut(s) | 214, 274, 459, 886 |
| Mva1269I | GAATGC | 1 cut(s) | 618 |
| MvaI | CCWGG | 2 cut(s) | 274, 886 |
| MvnI | CGCG | 2 cut(s) | 524, 531 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 394, 484, 511, 528, 545, 757 |
| NarI | GGCGCC | 1 cut(s) | 834 |
| NciI | CCSGG | 2 cut(s) | 214, 459 |
| NdeII | GATC | 4 cut(s) | 42, 112, 217, 304 |
| NheI | GCTAGC | 1 cut(s) | 1319 |
| NlaIV | GGNNCC | 2 cut(s) | 835, 1027 |
| NmuCI | GTSAC | 4 cut(s) | 237, 716, 935, 1075 |
| NspI | RCATGY | 1 cut(s) | 1390 |
| NspV | TTCGAA | 1 cut(s) | 426 |
| OliI | CACNNNNGTG | 2 cut(s) | 714, 1082 |
| PaeR7I | CTCGAG | 2 cut(s) | 482, 854 |
| PciI | ACATGT | 1 cut(s) | 1386 |
| PctI | GAATGC | 1 cut(s) | 618 |
| PdmI | GAANNNNTTC | 2 cut(s) | 21, 705 |
| PfeI | GAWTC | 2 cut(s) | 1071, 1166 |
| Pfl23II | CGTACG | 1 cut(s) | 814 |
| PinAI | ACCGGT | 1 cut(s) | 824 |
| PkrI | GCNGC | 2 cut(s) | 205, 342 |
| PluTI | GGCGCC | 1 cut(s) | 837 |
| Ppu21I | YACGTR | 1 cut(s) | 814 |
| PpuMI | RGGWCCY | 1 cut(s) | 1025 |
| PscI | ACATGT | 1 cut(s) | 1386 |
| PsiI | TTATAA | 1 cut(s) | 1410 |
| Psp124BI | GAGCTC | 2 cut(s) | 489, 1314 |
| Psp5II | RGGWCCY | 1 cut(s) | 1025 |
| Psp6I | CCWGG | 2 cut(s) | 272, 884 |
| PspEI | GGTNACC | 1 cut(s) | 935 |
| PspGI | CCWGG | 2 cut(s) | 272, 884 |
| PspLI | CGTACG | 1 cut(s) | 814 |
| PspN4I | GGNNCC | 2 cut(s) | 835, 1027 |
| PspPI | GGNCC | 5 cut(s) | 512, 803, 1025, 1123, 1265 |
| PspPPI | RGGWCCY | 1 cut(s) | 1025 |
| PspXI | VCTCGAGB | 1 cut(s) | 482 |
| PstI | CTGCAG | 1 cut(s) | 205 |
| RsaI | GTAC | 3 cut(s) | 224, 816, 849 |
| RsaNI | GTAC | 3 cut(s) | 223, 815, 848 |
| RseI | CAYNNNNRTG | 5 cut(s) | 494, 714, 794, 953, 1082 |
| SacI | GAGCTC | 2 cut(s) | 489, 1314 |
| SaqAI | TTAA | 4 cut(s) | 69, 87, 404, 642 |
| SatI | GCNGC | 2 cut(s) | 204, 341 |
| Sau3AI | GATC | 4 cut(s) | 42, 112, 217, 304 |
| Sau96I | GGNCC | 5 cut(s) | 512, 803, 1025, 1123, 1265 |
| ScaI | AGTACT | 1 cut(s) | 224 |
| ScrFI | CCNGG | 4 cut(s) | 214, 274, 459, 886 |
| SduI | GDGCHC | 5 cut(s) | 135, 489, 729, 1115, 1314 |
| SfaNI | GCATC | 2 cut(s) | 465, 1006 |
| SfcI | CTRYAG | 3 cut(s) | 201, 981, 998 |
| SfoI | GGCGCC | 1 cut(s) | 835 |
| Sfr274I | CTCGAG | 2 cut(s) | 482, 854 |
| SfuI | TTCGAA | 1 cut(s) | 426 |
| SinI | GGWCC | 2 cut(s) | 1025, 1123 |
| SlaI | CTCGAG | 2 cut(s) | 482, 854 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 494, 714, 794, 953, 1082 |
| SmlI | CTYRAG | 3 cut(s) | 482, 854, 1365 |
| SmoI | CTYRAG | 3 cut(s) | 482, 854, 1365 |
| SpeI | ACTAGT | 1 cut(s) | 1457 |
| Sse9I | AATT | 7 cut(s) | 11, 61, 73, 411, 877, 929, 1354 |
| SsiI | CCGC | 7 cut(s) | 183, 434, 524, 712, 967, 1263, 1278 |
| SspDI | GGCGCC | 1 cut(s) | 833 |
| SspMI | CTAG | 6 cut(s) | 372, 584, 944, 1320, 1398, 1458 |
| SstI | GAGCTC | 2 cut(s) | 489, 1314 |
| StyD4I | CCNGG | 4 cut(s) | 212, 272, 457, 884 |
| StyI | CCWWGG | 1 cut(s) | 549 |
| TaaI | ACNGT | 4 cut(s) | 34, 237, 982, 1127 |
| TaiI | ACGT | 1 cut(s) | 816 |
| TasI | AATT | 7 cut(s) | 11, 61, 73, 411, 877, 929, 1354 |
| TatI | WGTACW | 1 cut(s) | 222 |
| TfiI | GAWTC | 2 cut(s) | 1071, 1166 |
| Tru1I | TTAA | 4 cut(s) | 69, 87, 404, 642 |
| Tru9I | TTAA | 4 cut(s) | 69, 87, 404, 642 |
| TscAI | CASTG | 5 cut(s) | 128, 205, 332, 993, 1195 |
| TseFI | GTSAC | 4 cut(s) | 237, 716, 935, 1075 |
| TseI | GCWGC | 2 cut(s) | 203, 340 |
| Tsp45I | GTSAC | 4 cut(s) | 237, 716, 935, 1075 |
| TspGWI | ACGGA | 2 cut(s) | 73, 436 |
| TspRI | CASTG | 5 cut(s) | 128, 205, 332, 993, 1195 |
| VneI | GTGCAC | 1 cut(s) | 725 |
| VpaK11BI | GGWCC | 2 cut(s) | 1025, 1123 |
| XapI | RAATTY | 4 cut(s) | 11, 877, 929, 1354 |
| XceI | RCATGY | 1 cut(s) | 1390 |
| XhoI | CTCGAG | 2 cut(s) | 482, 854 |
| XmnI | GAANNNNTTC | 2 cut(s) | 21, 705 |
| XspI | CTAG | 6 cut(s) | 372, 584, 944, 1320, 1398, 1458 |
| ZrmI | AGTACT | 1 cut(s) | 224 |